mRNA_M-pyrifera_M_contig99871.22966.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig99871.22966.1
Unique NamemRNA_M-pyrifera_M_contig99871.22966.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig99871.22966.1 vs. uniprot
Match: UPI0018D63BC9 (meiotic nuclear division protein 1 homolog n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D63BC9)

HSP 1 Score: 79.3 bits (194), Expect = 2.430e-16
Identity = 38/87 (43.68%), Postives = 57/87 (65.52%), Query Frame = 1 
Query:    1 ERSGKLGELAKLEEEVGALEKEITMHKDNDPAVLRELEDKITVAKGAADRWTDNVWSTKDYCAKKLAMAGPTFDSALGIPADFDYVE 261
            +R+  L  LA+ E+E   L+ E+  +++ DP VL E++ +  VA+ AA+RWTDNV++ K +C KK +M   T D   GIP DFDYV+
Sbjct:  119 DRTELLSTLAEQEQENSRLKAELEKYRECDPEVLEEVKKQTLVARDAANRWTDNVFTIKSWCKKKFSMEEKTIDKHFGIPEDFDYVD 205
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BLAST of mRNA_M-pyrifera_M_contig99871.22966.1 vs. uniprot
Match: A0A2C9JYA7_BIOGL (Meiotic nuclear division protein 1 homolog n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JYA7_BIOGL)

HSP 1 Score: 77.8 bits (190), Expect = 9.540e-16
Identity = 40/87 (45.98%), Postives = 53/87 (60.92%), Query Frame = 1 
Query:    1 ERSGKLGELAKLEEEVGALEKEITMHKDNDPAVLRELEDKITVAKGAADRWTDNVWSTKDYCAKKLAMAGPTFDSALGIPADFDYVE 261
            ER   + EL K + E  AL  EI  +KD+DP+VL + + +   AK AA+RWTDN++STK +   K +      D   GIPADFDYVE
Sbjct:  119 ERVEVIEELNKRKAEKAALNAEIEKYKDSDPSVLEKYKQEAEQAKEAANRWTDNIFSTKSWIKNKFSFEESVLDKQFGIPADFDYVE 205
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BLAST of mRNA_M-pyrifera_M_contig99871.22966.1 vs. uniprot
Match: A0A8B8A0J4_ACAPL (Meiotic nuclear division protein 1 homolog n=2 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B8A0J4_ACAPL)

HSP 1 Score: 75.5 bits (184), Expect = 7.380e-15
Identity = 34/79 (43.04%), Postives = 52/79 (65.82%), Query Frame = 1 
Query:   25 LAKLEEEVGALEKEITMHKDNDPAVLRELEDKITVAKGAADRWTDNVWSTKDYCAKKLAMAGPTFDSALGIPADFDYVE 261
            LA  E+E   L+ E+  +++ DP VL E++ +  VA+ AA+RWTDN+++ K +C KK +M   T D   GIP DFDY++
Sbjct:  127 LAVQEQENSRLKAELEKYRECDPEVLEEVKKQTLVAREAANRWTDNIFTIKSWCKKKFSMEEKTIDKHFGIPEDFDYID 205
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BLAST of mRNA_M-pyrifera_M_contig99871.22966.1 vs. uniprot
Match: UPI0014584BA0 (meiotic nuclear division protein 1 homolog isoform X1 n=2 Tax=Pecten maximus TaxID=6579 RepID=UPI0014584BA0)

HSP 1 Score: 73.9 bits (180), Expect = 2.880e-14
Identity = 36/87 (41.38%), Postives = 55/87 (63.22%), Query Frame = 1 
Query:    1 ERSGKLGELAKLEEEVGALEKEITMHKDNDPAVLRELEDKITVAKGAADRWTDNVWSTKDYCAKKLAMAGPTFDSALGIPADFDYVE 261
            +RS  L  LA+  EE   L  E+ ++++ DP VL+E++++ TVA+ AA+RWTDNV+S K +  +K +      D    IP DFDY+E
Sbjct:  119 DRSELLAALAERREEKSRLMSELELYRECDPEVLQEVQNQTTVAREAANRWTDNVFSIKSWIKRKFSFEESVIDKQFDIPEDFDYME 205
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BLAST of mRNA_M-pyrifera_M_contig99871.22966.1 vs. uniprot
Match: A0A210PWV1_MIZYE (Meiotic nuclear division protein 1 homolog n=4 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210PWV1_MIZYE)

HSP 1 Score: 72.8 bits (177), Expect = 6.560e-14
Identity = 36/87 (41.38%), Postives = 54/87 (62.07%), Query Frame = 1 
Query:    1 ERSGKLGELAKLEEEVGALEKEITMHKDNDPAVLRELEDKITVAKGAADRWTDNVWSTKDYCAKKLAMAGPTFDSALGIPADFDYVE 261
            +RS  L EL   ++E   L  E+ ++++ DP VL+E++++  VAK AA+RWTDNV+S K +  +K +      D    IP DFDYVE
Sbjct:  108 DRSELLAELVVKKDEKSRLMSELDLYRECDPDVLQEVQNQTVVAKEAANRWTDNVFSIKSWIKRKFSFEESVIDKQFDIPEDFDYVE 194
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BLAST of mRNA_M-pyrifera_M_contig99871.22966.1 vs. uniprot
Match: H2ZBQ0_CIOSA (Meiotic nuclear division protein 1 homolog n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2ZBQ0_CIOSA)

HSP 1 Score: 71.6 bits (174), Expect = 2.210e-13
Identity = 34/87 (39.08%), Postives = 53/87 (60.92%), Query Frame = 1 
Query:    1 ERSGKLGELAKLEEEVGALEKEITMHKDNDPAVLRELEDKITVAKGAADRWTDNVWSTKDYCAKKLAMAGPTFDSALGIPADFDYVE 261
            ER   + EL +L+ +   LE EIT +KD DP V+ EL+ + T+AK AA+RWTDN+++ K +  +K  +     +    IP + DY+E
Sbjct:  119 ERENLVEELTELQTKKAKLETEITKYKDCDPEVINELQKEATIAKEAANRWTDNIFNLKSWIKRKFPIDENVINKQFDIPEELDYIE 205
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BLAST of mRNA_M-pyrifera_M_contig99871.22966.1 vs. uniprot
Match: K7GBG5_PELSI (Meiotic nuclear division protein 1 homolog n=16 Tax=Cryptodira TaxID=8464 RepID=K7GBG5_PELSI)

HSP 1 Score: 71.2 bits (173), Expect = 2.390e-13
Identity = 35/87 (40.23%), Postives = 52/87 (59.77%), Query Frame = 1 
Query:    1 ERSGKLGELAKLEEEVGALEKEITMHKDNDPAVLRELEDKITVAKGAADRWTDNVWSTKDYCAKKLAMAGPTFDSALGIPADFDYVE 261
            ER+  + ELA L E+   L+ EI  +++ DP V+ E+     VAK AA+RWTDN++S K +  +K        D + GIP DFDY++
Sbjct:  104 ERAALIKELAALREKKEQLKAEIDTYQECDPDVVEEIRQANKVAKEAANRWTDNIFSIKSWAKRKFGFEENRIDKSFGIPEDFDYID 190
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BLAST of mRNA_M-pyrifera_M_contig99871.22966.1 vs. uniprot
Match: A0A087TC95_STEMI (Meiotic nuclear division protein 1 homolog (Fragment) n=2 Tax=Stegodyphus TaxID=175340 RepID=A0A087TC95_STEMI)

HSP 1 Score: 71.2 bits (173), Expect = 3.100e-13
Identity = 36/87 (41.38%), Postives = 53/87 (60.92%), Query Frame = 1 
Query:    1 ERSGKLGELAKLEEEVGALEKEITMHKDNDPAVLRELEDKITVAKGAADRWTDNVWSTKDYCAKKLAMAGPTFDSALGIPADFDYVE 261
            ER+  L +LA+  E V  L+ +I  +KD DP VL+E+  +I +AK AA+RWTDN++S + +C  K        +   GIP D DY+E
Sbjct:  119 ERTKVLKDLAESTELVKRLKIQIEKYKDCDPDVLKEVRKQIDIAKEAANRWTDNIFSIRSWCKNKFFFEESVINKQFGIPEDLDYME 205
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BLAST of mRNA_M-pyrifera_M_contig99871.22966.1 vs. uniprot
Match: A0A091GXG6_BUCRH (Meiotic nuclear division protein 1 (Fragment) n=2 Tax=Buceros rhinoceros silvestris TaxID=175836 RepID=A0A091GXG6_BUCRH)

HSP 1 Score: 68.9 bits (167), Expect = 3.670e-13
Identity = 33/87 (37.93%), Postives = 51/87 (58.62%), Query Frame = 1 
Query:    1 ERSGKLGELAKLEEEVGALEKEITMHKDNDPAVLRELEDKITVAKGAADRWTDNVWSTKDYCAKKLAMAGPTFDSALGIPADFDYVE 261
            ER+  + ELA L +E   L+ E+  +++ DP V+ E+     VAK AA+RWTDN++S K +  +K        D + GIP D DY++
Sbjct:   28 ERAALVEELAALRKEKEQLKAEVDKYRECDPDVVEEMRQTNKVAKEAANRWTDNIFSIKSWAKRKFGFEESRIDKSFGIPEDLDYID 114
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BLAST of mRNA_M-pyrifera_M_contig99871.22966.1 vs. uniprot
Match: A0A851JGU4_9PASS (Meiotic nuclear division protein 1 homolog (Fragment) n=1 Tax=Donacobius atricapilla TaxID=237420 RepID=A0A851JGU4_9PASS)

HSP 1 Score: 70.5 bits (171), Expect = 4.310e-13
Identity = 36/87 (41.38%), Postives = 50/87 (57.47%), Query Frame = 1 
Query:    1 ERSGKLGELAKLEEEVGALEKEITMHKDNDPAVLRELEDKITVAKGAADRWTDNVWSTKDYCAKKLAMAGPTFDSALGIPADFDYVE 261
            ER+  L ELA L ++   L+ EI  +K+ DP V+ E+     VAK AA+RWTDN++S K +  +K        D   GIP D DYV+
Sbjct:   99 ERAALLKELAALRQKKEQLKTEIDKYKECDPDVVEEMRQTNQVAKEAANRWTDNIFSIKSWAKRKFGFEESRIDKGFGIPEDLDYVD 185
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99871.22966.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0018D63BC92.430e-1643.68meiotic nuclear division protein 1 homolog n=1 Tax... [more]
A0A2C9JYA7_BIOGL9.540e-1645.98Meiotic nuclear division protein 1 homolog n=1 Tax... [more]
A0A8B8A0J4_ACAPL7.380e-1543.04Meiotic nuclear division protein 1 homolog n=2 Tax... [more]
UPI0014584BA02.880e-1441.38meiotic nuclear division protein 1 homolog isoform... [more]
A0A210PWV1_MIZYE6.560e-1441.38Meiotic nuclear division protein 1 homolog n=4 Tax... [more]
H2ZBQ0_CIOSA2.210e-1339.08Meiotic nuclear division protein 1 homolog n=1 Tax... [more]
K7GBG5_PELSI2.390e-1340.23Meiotic nuclear division protein 1 homolog n=16 Ta... [more]
A0A087TC95_STEMI3.100e-1341.38Meiotic nuclear division protein 1 homolog (Fragme... [more]
A0A091GXG6_BUCRH3.670e-1337.93Meiotic nuclear division protein 1 (Fragment) n=2 ... [more]
A0A851JGU4_9PASS4.310e-1341.38Meiotic nuclear division protein 1 homolog (Fragme... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99871contigM-pyrifera_M_contig99871:26..292 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score79.3
Seed ortholog evalue9.8e-13
Seed eggNOG ortholog6087.XP_004209245.1
Preferred nameMND1
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000280,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007127,GO:0007131,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0022402,GO:0022414,GO:0033554,GO:0034641,GO:0035825,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048285,GO:0050896,GO:0051321,GO:0051716,GO:0061982,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140013,GO:1901360,GO:1901363,GO:1903046
EggNOG free text desc.Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis
EggNOG OGs39R64@33154,3BEPV@33208,COG5124@1,KOG3433@2759
COG Functional cat.D
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Exons1
Model size267
Cds size267
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816915.9965022-CDS-M-pyrifera_M_contig99871:25..2921622816915.9965022-CDS-M-pyrifera_M_contig99871:25..292Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99871 26..292 +
1692278253.4707441-CDS-M-pyrifera_M_contig99871:25..2921692278253.4707441-CDS-M-pyrifera_M_contig99871:25..292Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99871 26..292 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99871.22966.1prot_M-pyrifera_M_contig99871.22966.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig99871 26..292 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig99871.22966.1

>prot_M-pyrifera_M_contig99871.22966.1 ID=prot_M-pyrifera_M_contig99871.22966.1|Name=mRNA_M-pyrifera_M_contig99871.22966.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=89bp
ERSGKLGELAKLEEEVGALEKEITMHKDNDPAVLRELEDKITVAKGAADR
WTDNVWSTKDYCAKKLAMAGPTFDSALGIPADFDYVEA*
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mRNA from alignment at M-pyrifera_M_contig99871:26..292+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig99871.22966.1 ID=mRNA_M-pyrifera_M_contig99871.22966.1|Name=mRNA_M-pyrifera_M_contig99871.22966.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=267bp|location=Sequence derived from alignment at M-pyrifera_M_contig99871:26..292+ (Macrocystis pyrifera P11B4 male)
GAGCGGAGTGGGAAGTTGGGGGAGCTTGCGAAGTTGGAGGAGGAAGTGGG
GGCGCTGGAGAAGGAGATCACGATGCACAAGGACAACGACCCGGCTGTGT
TGCGGGAGCTCGAAGACAAGATCACCGTGGCCAAGGGCGCAGCAGACCGG
TGGACCGACAACGTGTGGAGCACAAAGGACTACTGCGCCAAGAAGCTCGC
CATGGCGGGACCCACCTTCGACTCCGCCCTAGGCATCCCAGCAGACTTTG
ACTACGTCGAGGCGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig99871:26..292+

>mRNA_M-pyrifera_M_contig99871.22966.1 ID=mRNA_M-pyrifera_M_contig99871.22966.1|Name=mRNA_M-pyrifera_M_contig99871.22966.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig99871:26..292+ (Macrocystis pyrifera P11B4 male)
GAGCGGAGTGGGAAGTTGGGGGAGCTTGCGAAGTTGGAGGAGGAAGTGGG
GGCGCTGGAGAAGGAGATCACGATGCACAAGGACAACGACCCGGCTGTGT
TGCGGGAGCTCGAAGACAAGATCACCGTGGCCAAGGGCGCAGCAGACCGG
TGGACCGACAACGTGTGGAGCACAAAGGACTACTGCGCCAAGAAGCTCGC
CATGGCGGGACCCACCTTCGACTCCGCCCTAGGCATCCCAGCAGACTTTG
ACTACGTCGAGGCGTGAGAGCGGAGTGGGAAGTTGGGGGAGCTTGCGAAG
TTGGAGGAGGAAGTGGGGGCGCTGGAGAAGGAGATCACGATGCACAAGGA
CAACGACCCGGCTGTGTTGCGGGAGCTCGAAGACAAGATCACCGTGGCCA
AGGGCGCAGCAGACCGGTGGACCGACAACGTGTGGAGCACAAAGGACTAC
TGCGCCAAGAAGCTCGCCATGGCGGGACCCACCTTCGACTCCGCCCTAGG
CATCCCAGCAGACTTTGACTACGTCGAGGCGTGA
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