mRNA_M-pyrifera_M_contig99800.22950.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig99800.22950.1 vs. uniprot
Match: A0A2E7KIL0_9PLAN (Uncharacterized protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KIL0_9PLAN) HSP 1 Score: 451 bits (1159), Expect = 3.780e-155 Identity = 225/228 (98.68%), Postives = 228/228 (100.00%), Query Frame = 1 Query: 1 GIELLARQDAGLALRVWQSDFLENPEVLTSVSRLIAQENRAAFPDFARFVSGTKSLLELLRKTPDPSNQADLSALLEHEDSELWRFCLFLTLETARLRQDRQLLQLASKKLLEQSGRLYDPQQEEAFNMINDLNCLYYSAFRAAQQVNNQKLQHELLSRMVLLYPRVGESFFNILDERHIQKQDWLYLFHKRDPASDWLWEYTVMLQEEVEEFGSGIYEAGVLWATTG 684 GIELLARQDAGLALRVWQSDFLENPEVLTSVSRLIAQENRAAFPDFARFVSGTKSLLELLRKTPDPS+QADLSALLEHEDSELWRFCLFLTLETARLRQDRQLLQLASKKLLEQSGRLYDPQQEEAFNMINDLNCLYYSAFRAAQQVN+QKLQHELLSRMVLLYPRVGESFFNILDERHIQKQDWLYLFH+RDPASDWLWEYTVMLQEEVEEFGSGIYEAGVLWATTG Sbjct: 244 GIELLARQDAGLALRVWQSDFLENPEVLTSVSRLIAQENRAAFPDFARFVSGTKSLLELLRKTPDPSDQADLSALLEHEDSELWRFCLFLTLETARLRQDRQLLQLASKKLLEQSGRLYDPQQEEAFNMINDLNCLYYSAFRAAQQVNDQKLQHELLSRMVLLYPRVGESFFNILDERHIQKQDWLYLFHQRDPASDWLWEYTVMLQEEVEEFGSGIYEAGVLWATTG 471
BLAST of mRNA_M-pyrifera_M_contig99800.22950.1 vs. uniprot
Match: A0A6I6ADB1_9PLAN (Uncharacterized protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A6I6ADB1_9PLAN) HSP 1 Score: 204 bits (518), Expect = 8.310e-59 Identity = 110/228 (48.25%), Postives = 153/228 (67.11%), Query Frame = 1 Query: 1 GIELLARQDAGLALRVWQSDFLENPEVLTSVSRLIAQENRAAFPDFARFVSGTKSLLELLRKTPDPSNQADLSALLEHEDSELWRFCLFLTLETARLRQDRQLLQLASKKLLEQSGRLYDPQQEEAFNMINDLNCLYYSAFRAAQQVNNQKLQHELLSRMVLLYPRVGESFFNILDERHIQKQDWLYLFHKRDPASDWLWEYTVMLQEEVEEFGSGIYEAGVLWATTG 684 GIELLARQD G AL VWQS FL+ PE+ ++ S+LI+ E+R A P+ A+FVSG L L+K + D LL+ DSELWRF + L+LE+ARLR D++LL+L S LLEQS RLY +EE N NDL LY+SAF AAQ++N+++LQ +LLSR++ LYP++GE + ++L ++ Q DW YLF +WL ++ V+L ++ +G E G+LWAT G Sbjct: 260 GIELLARQDEGQALLVWQSSFLDYPEIASNESQLISPESRKASPELAQFVSGVNVCLHQLQKETYKESPEDFKRLLQEPDSELWRFNVLLSLESARLRADQKLLKLVSNSLLEQSERLYSISREEYENSPNDLCYLYFSAFYAAQRLNDRELQRDLLSRLLKLYPQMGEFYTDVLYDQQSQNLDWFYLFSDLRLDREWLPQFEVVLLKDSGPYGYSKAEFGMLWATFG 487
BLAST of mRNA_M-pyrifera_M_contig99800.22950.1 vs. uniprot
Match: A0A517RA45_9PLAN (Uncharacterized protein n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RA45_9PLAN) HSP 1 Score: 199 bits (505), Expect = 6.080e-57 Identity = 107/227 (47.14%), Postives = 144/227 (63.44%), Query Frame = 1 Query: 1 GIELLARQDAGLALRVWQSDFLENPEVLTSVSRLIAQENRAAFPDFARFVSGTKSLLELLRKTPDPSNQADLSALLEHEDSELWRFCLFLTLETARLRQDRQLLQLASKKLLEQSGRLYDPQQEEAFNMINDLNCLYYSAFRAAQQVNNQKLQHELLSRMVLLYPRVGESFFNILDERHIQKQDWLYLFHKRDPASDWLWEYTVMLQEEVEEFGSGIYEAGVLWATT 681 GI+LLA++D +AL +WQS FL +PE++ + S L+ E+ A P FV+G S L LLR + LS LL+ +SELWRFC+ L+LETARLR DR+LLQLAS+ LLEQS RLY ++EE NM DL CLYYSAFRAA++VN+ KLQ +LL R++ + P + ++ N+L H DW L WL +Y + E++ G YE G+LWATT Sbjct: 256 GIDLLAKKDESMALMLWQSGFLTDPEMVRNSSLLLLPESHKAAPKLHHFVAGVNSCLNLLRTQTYQKSPEALSKLLQEPESELWRFCVLLSLETARLRADRKLLQLASRSLLEQSDRLYSFKREEDENMAEDLRCLYYSAFRAAKRVNDSKLQQKLLERILSIDPDIDGTYHNVLTIHHTDISDWSQLLSDAAIDPKWLKKYEEISLNTFEKYLFGQYEIGMLWATT 482
BLAST of mRNA_M-pyrifera_M_contig99800.22950.1 vs. uniprot
Match: A0A517VDJ6_9PLAN (Uncharacterized protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A517VDJ6_9PLAN) HSP 1 Score: 187 bits (475), Expect = 1.560e-52 Identity = 108/230 (46.96%), Postives = 144/230 (62.61%), Query Frame = 1 Query: 1 GIELLARQDA--GLALRVWQSDFLENPEVLTSVSRLIAQENRAAFPDFARFVSGTKSLLELLRKTPDPSNQADLSALLEHEDSELWRFCLFLTLETARLRQDRQLLQLASKKLLEQSGRLYDPQQEEAFNMINDLNCLYYSAFRAAQQVNNQKLQHELLSRMVLLYPRVGESFFNILDERHIQKQDWLYLFHKRDPASDWLWEYTVMLQEEVEEFGSGIYEAGVLWATTG 684 GI LLA++D GLAL VW+SDFLE PEV S L++ + R P A VSG S L LRK N + LL+ DSELWRF + L+LETARLR D LLQL ++ LLEQS RLY +EE N NDL LY+SAF AAQ++N++KLQ +LLSR++ LYP++G+ + ++L ++ + DW YLF R A W ++ +L ++ G E G+LWAT G Sbjct: 258 GIALLAKKDKNEGLALLVWKSDFLEYPEVSAPDSVLLSPDIRKTSPKLAHIVSGVNSCLSQLRKQTYKKNPEVFTRLLQEPDSELWRFQVLLSLETARLRADHNLLQLTARSLLEQSERLYSTSREEYENSPNDLCYLYFSAFYAAQRLNDRKLQDDLLSRLLKLYPQMGDYYTDVLYDQQSKNLDWFYLFSDRALAPVWRQKFEAVLLKDSGPQGFSKSEFGMLWATFG 487
BLAST of mRNA_M-pyrifera_M_contig99800.22950.1 vs. uniprot
Match: A0A517W3U3_9PLAN (Uncharacterized protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W3U3_9PLAN) HSP 1 Score: 176 bits (445), Expect = 3.490e-48 Identity = 101/230 (43.91%), Postives = 143/230 (62.17%), Query Frame = 1 Query: 1 GIELLARQDAGLALRVWQSDFLENPEVLTSVSRLIAQENRAAFPDFARFVSGTKSLLELLRKTPDPSNQADLSALLEHEDSELWRFCLFLTLETARLRQDRQLLQLASKKLLEQSGRLYDPQQEEAFNMINDLNCLYYSAFRAAQQVNNQKLQHELLSRMVLLYPRVG--ESFFNILDERHIQKQDWLYLFHKRDPASDWLWEYTVMLQEEVEEFGSGIYEAGVLWATTG 684 G++LLA++D LA+ +WQS FLE V + S L++ + P +RF+S KS+L L R L+ALL+ DSELWRF + LTLETARL D +LLQLAS+ LLEQS RLY+P+ E+ +M+ DLN LY+S +RAA++VNN+KLQ+EL+ RM+ L+P +S NIL +R + W YL R W+ ++ +E+ E G+ Y G+ A TG Sbjct: 260 GLDLLAKRDEPLAILIWQSRFLETFGVEVNNSILLSSDRLKTHPKLSRFISSVKSILNLFRNQTYKKRPEVLTALLQEPDSELWRFYMLLTLETARLCADEKLLQLASRNLLEQSQRLYNPKNEDYKHMLRDLNILYFSTYRAARRVNNKKLQNELMKRMLSLFPAASNEDSHNNILSDRIDEISIWAYLISDRSGDPMWIQKF----EEQAGELGA--YYIGIFCAITG 483
BLAST of mRNA_M-pyrifera_M_contig99800.22950.1 vs. uniprot
Match: A0A2E7K4X4_9PLAN (Uncharacterized protein n=1 Tax=Gimesia sp. TaxID=2024833 RepID=A0A2E7K4X4_9PLAN) HSP 1 Score: 162 bits (409), Expect = 5.830e-43 Identity = 92/231 (39.83%), Postives = 141/231 (61.04%), Query Frame = 1 Query: 1 GIELLARQDAGLALRVWQSDFLENPEVLTSVSRLIAQENRAAFPDFARFVSGTKSLLELLRKTPDPSNQADLSALLEHEDSELWRFCLFLTLETARLRQDRQLLQLASKKLLEQSGRLYDPQQEEAFNMINDLNCLYYSAFRAAQQVNNQKLQHELLSRMVLLYPRV-GESFFNILDERHIQKQDWLYLFH--KRDPASDWLWEYTVMLQEEVEEFGSGIYEAGVLWATTG 684 G+ELLA++D A+++WQS +LEN V S S +++ +N+ P + F+S KS+L++LR LSALL+ DSE+WRF + LTLETARL D +LL L + LLEQS RL++P ++ NMI DL+ LY+SA+RAA++VN++K Q E++ R++ L+P++ E F++L + W +L D S +E T+ E + G++WATTG Sbjct: 260 GLELLAKKDESSAIQIWQSRYLENYGVEVSNSIILSSKNQINCPKLSHFISSVKSILDILRNQTYKKKPEVLSALLQEPDSEIWRFYVLLTLETARLYADEKLLHLGTCNLLEQSQRLHNPNVDDTENMIQDLSILYFSAYRAAKRVNDKKTQKEMMKRLLSLFPKITDEGIFDVLSTNVDEISIWAFLISDSSHDGVSLHNFEETLFRASEGLVGKLETHCIGIIWATTG 490 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99800.22950.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig99800.22950.1 >prot_M-pyrifera_M_contig99800.22950.1 ID=prot_M-pyrifera_M_contig99800.22950.1|Name=mRNA_M-pyrifera_M_contig99800.22950.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=228bp GIELLARQDAGLALRVWQSDFLENPEVLTSVSRLIAQENRAAFPDFARFVback to top mRNA from alignment at M-pyrifera_M_contig99800:2..685- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig99800.22950.1 ID=mRNA_M-pyrifera_M_contig99800.22950.1|Name=mRNA_M-pyrifera_M_contig99800.22950.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=684bp|location=Sequence derived from alignment at M-pyrifera_M_contig99800:2..685- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig99800:2..685- >mRNA_M-pyrifera_M_contig99800.22950.1 ID=mRNA_M-pyrifera_M_contig99800.22950.1|Name=mRNA_M-pyrifera_M_contig99800.22950.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1368bp|location=Sequence derived from alignment at M-pyrifera_M_contig99800:2..685- (Macrocystis pyrifera P11B4 male)back to top |