mRNA_M-pyrifera_M_contig99796.22946.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig99796.22946.1
Unique NamemRNA_M-pyrifera_M_contig99796.22946.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig99796.22946.1 vs. uniprot
Match: A0A5A8EGT3_CAFRO (FCP1 homology domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EGT3_CAFRO)

HSP 1 Score: 189 bits (481), Expect = 2.040e-55
Identity = 90/126 (71.43%), Postives = 103/126 (81.75%), Query Frame = 1 
Query:  112 FEEFNPYLFIKLLPPYRDVAPRHRRVLLPAKSRGAPKVNLVLDLDETLVHCSIEPIPDADLRFPVEFNGATYQVYVRNRPYVDRFLRHVASRFEVTIFTASQRVYAEKLLDLLDPRHELIHHRLYR 489
            +EEFNPYLFI+LLPPY  V PR  RV+LP K   AP ++LVLDLDETLVHCS+EPIPD DLRFPV F G TYQVYVR RP+++RFL  VAS+FEVT+FTASQ VYA +LLDL+DP H  I HRLYR
Sbjct:  244 YEEFNPYLFIRLLPPYSSVRPRVNRVVLPRKVSDAPPISLVLDLDETLVHCSVEPIPDPDLRFPVVFGGHTYQVYVRKRPFLERFLARVASKFEVTVFTASQSVYASRLLDLIDPHHRWIRHRLYR 369
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BLAST of mRNA_M-pyrifera_M_contig99796.22946.1 vs. uniprot
Match: A0A7S1G7R3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G7R3_9STRA)

HSP 1 Score: 187 bits (475), Expect = 1.550e-54
Identity = 88/127 (69.29%), Postives = 106/127 (83.46%), Query Frame = 1 
Query:  109 EFEEFNPYLFIKLLPPYRDVAPRHRRVLLPAKSRGAPKVNLVLDLDETLVHCSIEPIPDADLRFPVEFNGATYQVYVRNRPYVDRFLRHVASRFEVTIFTASQRVYAEKLLDLLDPRHELIHHRLYR 489
            E+EEFNPYLFIK LP Y +V P  R ++LP KSR  P+++LVLDLDETLVHCS+EPI DADL FPVEFNG TY+V+VR RPY+D FL   AS++EVT+FTASQ+VYAEKLLDLLDPR  L+ +RL+R
Sbjct:  242 EYEEFNPYLFIKCLPRYEEVVPTARELVLPRKSRSGPRLSLVLDLDETLVHCSVEPIEDADLTFPVEFNGQTYEVFVRKRPYLDHFLEWCASKYEVTVFTASQKVYAEKLLDLLDPRGRLVKYRLFR 368
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BLAST of mRNA_M-pyrifera_M_contig99796.22946.1 vs. uniprot
Match: A0A7S4ALL0_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ALL0_9STRA)

HSP 1 Score: 157 bits (398), Expect = 4.010e-45
Identity = 75/125 (60.00%), Postives = 95/125 (76.00%), Query Frame = 1 
Query:  115 EEFNPYLFIKLLPPYRDVAPRHRRVLLPAKSRGAPKVNLVLDLDETLVHCSIEPIPDADLRFPVEFNGATYQVYVRNRPYVDRFLRHVASRFEVTIFTASQRVYAEKLLDLLDPRHELIHHRLYR 489
            EEFNPY FIK LP Y DV        LPAK R AP + LVLDLDETLVHC++E + DADL FPV+F+G TY V+VR RP++++FL  +A +FEV +FTASQ+VYA+ LLDL+DP HE I +R++R
Sbjct:   46 EEFNPYAFIKSLPDYEDVKSLCPADRLPAKDRNAPPITLVLDLDETLVHCTVEQVDDADLTFPVDFHGMTYMVHVRLRPHLNQFLEAIADKFEVVVFTASQQVYADALLDLIDPNHEYIKYRMFR 170
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BLAST of mRNA_M-pyrifera_M_contig99796.22946.1 vs. uniprot
Match: A0A482R675_9ARCH (FCP1 homology domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482R675_9ARCH)

HSP 1 Score: 154 bits (389), Expect = 1.470e-44
Identity = 73/108 (67.59%), Postives = 90/108 (83.33%), Query Frame = 1 
Query:  166 VAPRHRRVLLPAKSRGAPKVNLVLDLDETLVHCSIEPIPDADLRFPVEFNGATYQVYVRNRPYVDRFLRHVASRFEVTIFTASQRVYAEKLLDLLDPRHELIHHRLYR 489
            VAPR  R+ LP K   +P +NL+LDLDETLVHCS++PI DAD++FPV FNG  YQVYVR RPY+D+FL+ +A RFEVTIFTASQ+VYAE+LL+LLDP  + I+HRLYR
Sbjct:   11 VAPRVPRICLPGKRVTSPDINLILDLDETLVHCSVDPIHDADVQFPVAFNGTNYQVYVRKRPYLDKFLQWIAGRFEVTIFTASQQVYAERLLNLLDPEGKYINHRLYR 118
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BLAST of mRNA_M-pyrifera_M_contig99796.22946.1 vs. uniprot
Match: A0A7S4W0U0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W0U0_9STRA)

HSP 1 Score: 155 bits (393), Expect = 2.210e-44
Identity = 75/125 (60.00%), Postives = 92/125 (73.60%), Query Frame = 1 
Query:  118 EFNPYLFIKLLPPYRDVAPR-HRRVLLPAKSRGAPKVNLVLDLDETLVHCSIEPIPDADLRFPVEFNGATYQVYVRNRPYVDRFLRHVASRFEVTIFTASQRVYAEKLLDLLDPRHELIHHRLYR 489
            EFNPYLFIK LP Y  + P  H R+ LP K   +P + LVLDLDETLVHC++EP PDAD+ FPV FNG  YQV+VR RPY+  FL  V  +FEV +FTASQRVYA++LLD +DP  + I HR++R
Sbjct:   46 EFNPYLFIKTLPTYSTIVPNPHHRICLPPKHPLSPPIALVLDLDETLVHCTVEPTPDADMVFPVVFNGIQYQVHVRTRPYLREFLEAVVDKFEVIVFTASQRVYADELLDRIDPEGKYIKHRMFR 170
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BLAST of mRNA_M-pyrifera_M_contig99796.22946.1 vs. uniprot
Match: A0A7S2WA26_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WA26_9STRA)

HSP 1 Score: 155 bits (393), Expect = 5.550e-43
Identity = 77/128 (60.16%), Postives = 95/128 (74.22%), Query Frame = 1 
Query:  115 EEFNPYLFIKLLPPYRDVAPRHRRV---LLPAKSRGAPKVNLVLDLDETLVHCSIEPIPDADLRFPVEFNGATYQVYVRNRPYVDRFLRHVASRFEVTIFTASQRVYAEKLLDLLDPRHELIHHRLYR 489
            +EFNPYLFIK LPPY +    H  +   L P +   +  V LVLDLDETLVHCS+E  P ADL FPV FNG  YQV+V+ RP+++ FLR VA RFEV +FTASQ+VYA+KLLDL+DP+ E+I HRL+R
Sbjct:  176 DEFNPYLFIKQLPPYAEARLGHPHMNPRLPPRRLTRSSPVTLVLDLDETLVHCSVEATPSADLIFPVHFNGVEYQVHVQKRPHLEHFLREVAQRFEVVVFTASQQVYADKLLDLIDPKREMIKHRLFR 303
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BLAST of mRNA_M-pyrifera_M_contig99796.22946.1 vs. uniprot
Match: A0A7S4W5X2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W5X2_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.360e-42
Identity = 71/114 (62.28%), Postives = 85/114 (74.56%), Query Frame = 1 
Query:  118 EFNPYLFIKLLPPYRDVAPR-HRRVLLPAKSRGAPKVNLVLDLDETLVHCSIEPIPDADLRFPVEFNGATYQVYVRNRPYVDRFLRHVASRFEVTIFTASQRVYAEKLLDLLDP 456
            EFNPYLFIK LP Y  + P  H R+ LP K   +P + LVLDLDETLVHC++EP PDAD+ FPV FNG  YQV+VR RPY+  FL  V  +FEV +FTASQRVYA++LLD +DP
Sbjct:   46 EFNPYLFIKTLPTYSTIVPNPHHRICLPPKHPLSPPIALVLDLDETLVHCTVEPTPDADMVFPVVFNGIQYQVHVRTRPYLREFLEAVVDKFEVIVFTASQRVYADELLDRIDP 159
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BLAST of mRNA_M-pyrifera_M_contig99796.22946.1 vs. uniprot
Match: A0A448ZLK1_9STRA (FCP1 homology domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZLK1_9STRA)

HSP 1 Score: 154 bits (390), Expect = 3.190e-42
Identity = 75/125 (60.00%), Postives = 94/125 (75.20%), Query Frame = 1 
Query:  115 EEFNPYLFIKLLPPYRDVAPRHRRVLLPAKSRGAPKVNLVLDLDETLVHCSIEPIPDADLRFPVEFNGATYQVYVRNRPYVDRFLRHVASRFEVTIFTASQRVYAEKLLDLLDPRHELIHHRLYR 489
            EEFNPY FIK LP Y DV        LPAK   AP + LVLDLDETLVHC++E + DADL FPV+F+G TY V+VR RPY+++FL  +A +FEV +FTASQ+VYA+ LLDL+DP HE I +R++R
Sbjct:  216 EEFNPYAFIKSLPHYDDVKSLCPADRLPAKRDDAPPITLVLDLDETLVHCTVEQVDDADLTFPVDFHGMTYTVHVRLRPYLNQFLEAIADKFEVVVFTASQQVYADALLDLIDPNHEYIKYRMFR 340
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BLAST of mRNA_M-pyrifera_M_contig99796.22946.1 vs. uniprot
Match: A0A7S4ALF1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ALF1_9STRA)

HSP 1 Score: 147 bits (370), Expect = 4.370e-42
Identity = 70/114 (61.40%), Postives = 87/114 (76.32%), Query Frame = 1 
Query:  115 EEFNPYLFIKLLPPYRDVAPRHRRVLLPAKSRGAPKVNLVLDLDETLVHCSIEPIPDADLRFPVEFNGATYQVYVRNRPYVDRFLRHVASRFEVTIFTASQRVYAEKLLDLLDP 456
            EEFNPY FIK LP Y DV        LPAK R AP + LVLDLDETLVHC++E + DADL FPV+F+G TY V+VR RP++++FL  +A +FEV +FTASQ+VYA+ LLDL+DP
Sbjct:   46 EEFNPYAFIKSLPDYEDVKSLCPADRLPAKDRNAPPITLVLDLDETLVHCTVEQVDDADLTFPVDFHGMTYMVHVRLRPHLNQFLEAIADKFEVVVFTASQQVYADALLDLIDP 159
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BLAST of mRNA_M-pyrifera_M_contig99796.22946.1 vs. uniprot
Match: A0A1Z5JDB3_FISSO (FCP1 homology domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JDB3_FISSO)

HSP 1 Score: 153 bits (386), Expect = 4.410e-42
Identity = 71/127 (55.91%), Postives = 95/127 (74.80%), Query Frame = 1 
Query:  109 EFEEFNPYLFIKLLPPYRDVAPRHRRVLLPAKSRGAPKVNLVLDLDETLVHCSIEPIPDADLRFPVEFNGATYQVYVRNRPYVDRFLRHVASRFEVTIFTASQRVYAEKLLDLLDPRHELIHHRLYR 489
            E +EFNP+ FI+ LPPY++++     V LP K   AP + LVLDLDETLVHCS+EP+ DADL FPV+F+G TYQV+V+ RPY++ FL     +FEV +FTASQ++YA +LL+ +DP  + I HRLYR
Sbjct:  154 ESDEFNPWQFIQSLPPYQEISYLRPSVCLPPKDPQAPPITLVLDLDETLVHCSVEPVEDADLVFPVDFHGITYQVHVKKRPYLETFLEACCGKFEVVLFTASQKIYANELLNRIDPEGKYIQHRLYR 280
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99796.22946.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8EGT3_CAFRO2.040e-5571.43FCP1 homology domain-containing protein n=3 Tax=Ca... [more]
A0A7S1G7R3_9STRA1.550e-5469.29Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S4ALL0_9STRA4.010e-4560.00Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A482R675_9ARCH1.470e-4467.59FCP1 homology domain-containing protein (Fragment)... [more]
A0A7S4W0U0_9STRA2.210e-4460.00Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2WA26_9STRA5.550e-4360.16Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4W5X2_9STRA1.360e-4262.28Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A448ZLK1_9STRA3.190e-4260.00FCP1 homology domain-containing protein n=1 Tax=Ps... [more]
A0A7S4ALF1_9STRA4.370e-4261.40Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A1Z5JDB3_FISSO4.410e-4255.91FCP1 homology domain-containing protein n=2 Tax=Fi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99796contigM-pyrifera_M_contig99796:2..490 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score153.7
Seed ortholog evalue7.5e-35
Seed eggNOG ortholog112098.XP_008617402.1
Preferred nameCTDSPL2
KEGG koko:K17616
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004721,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006355,GO:0006357,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009966,GO:0009968,GO:0009987,GO:0010468,GO:0010556,GO:0010646,GO:0010648,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019219,GO:0019222,GO:0019538,GO:0023051,GO:0023057,GO:0030510,GO:0030514,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032386,GO:0032388,GO:0032879,GO:0032880,GO:0033157,GO:0036211,GO:0042578,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046822,GO:0046824,GO:0046825,GO:0046827,GO:0048518,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0051049,GO:0051050,GO:0051171,GO:0051222,GO:0051223,GO:0051252,GO:0060255,GO:0060341,GO:0065007,GO:0070013,GO:0070201,GO:0071704,GO:0080090,GO:0090087,GO:0090092,GO:0090101,GO:0090287,GO:0090288,GO:0090316,GO:0140096,GO:1901564,GO:1903506,GO:1903827,GO:1903829,GO:1904951,GO:2000112,GO:2001141
EggNOG free text desc.phosphoprotein phosphatase activity
EggNOG OGsCOG5190@1,KOG1605@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009
Exons1
Model size489
Cds size489
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816915.1585128-CDS-M-pyrifera_M_contig99796:1..4901622816915.1585128-CDS-M-pyrifera_M_contig99796:1..490Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99796 2..490 -
1692278253.0557582-CDS-M-pyrifera_M_contig99796:1..4901692278253.0557582-CDS-M-pyrifera_M_contig99796:1..490Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99796 2..490 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99796.22946.1prot_M-pyrifera_M_contig99796.22946.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig99796 2..490 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig99796.22946.1

>prot_M-pyrifera_M_contig99796.22946.1 ID=prot_M-pyrifera_M_contig99796.22946.1|Name=mRNA_M-pyrifera_M_contig99796.22946.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=163bp
AAREARRRAEEEAAVAAAAAAAEARRGEEEEEEESYEFEEFNPYLFIKLL
PPYRDVAPRHRRVLLPAKSRGAPKVNLVLDLDETLVHCSIEPIPDADLRF
PVEFNGATYQVYVRNRPYVDRFLRHVASRFEVTIFTASQRVYAEKLLDLL
DPRHELIHHRLYR
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mRNA from alignment at M-pyrifera_M_contig99796:2..490-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig99796.22946.1 ID=mRNA_M-pyrifera_M_contig99796.22946.1|Name=mRNA_M-pyrifera_M_contig99796.22946.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=489bp|location=Sequence derived from alignment at M-pyrifera_M_contig99796:2..490- (Macrocystis pyrifera P11B4 male)
GCTGCGAGGGAAGCGAGGCGTCGGGCGGAGGAGGAGGCGGCGGTGGCTGC
TGCAGCAGCAGCAGCCGAGGCGCGTCGTGGGGAGGAGGAGGAGGAGGAGG
AGAGTTATGAGTTTGAGGAGTTCAACCCATACCTGTTCATCAAGCTGCTG
CCGCCCTACCGTGACGTGGCGCCGCGACACCGCAGGGTGCTACTGCCTGC
AAAGAGCAGAGGGGCGCCCAAGGTGAATTTGGTGCTGGATTTGGATGAGA
CGCTGGTGCATTGCTCCATTGAGCCCATTCCAGATGCCGATTTGCGCTTT
CCAGTCGAATTCAACGGGGCCACGTATCAAGTGTACGTCAGGAACCGGCC
TTATGTGGACAGGTTCCTGCGCCACGTGGCTTCTCGCTTCGAAGTGACCA
TCTTCACAGCCTCCCAGAGAGTCTACGCCGAAAAACTCCTCGACCTGCTC
GACCCAAGGCACGAACTCATCCACCACAGACTCTACCGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig99796:2..490-

>mRNA_M-pyrifera_M_contig99796.22946.1 ID=mRNA_M-pyrifera_M_contig99796.22946.1|Name=mRNA_M-pyrifera_M_contig99796.22946.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=978bp|location=Sequence derived from alignment at M-pyrifera_M_contig99796:2..490- (Macrocystis pyrifera P11B4 male)
GCTGCGAGGGAAGCGAGGCGTCGGGCGGAGGAGGAGGCGGCGGTGGCTGC
TGCAGCAGCAGCAGCCGAGGCGCGTCGTGGGGAGGAGGAGGAGGAGGAGG
AGAGTTATGAGTTTGAGGAGTTCAACCCATACCTGTTCATCAAGCTGCTG
CCGCCCTACCGTGACGTGGCGCCGCGACACCGCAGGGTGCTACTGCCTGC
AAAGAGCAGAGGGGCGCCCAAGGTGAATTTGGTGCTGGATTTGGATGAGA
CGCTGGTGCATTGCTCCATTGAGCCCATTCCAGATGCCGATTTGCGCTTT
CCAGTCGAATTCAACGGGGCCACGTATCAAGTGTACGTCAGGAACCGGCC
TTATGTGGACAGGTTCCTGCGCCACGTGGCTTCTCGCTTCGAAGTGACCA
TCTTCACAGCCTCCCAGAGAGTCTACGCCGAAAAACTCCTCGACCTGCTC
GACCCAAGGCACGAACTCATCCACCACAGACTCTACCGCGCTGCGAGGGA
AGCGAGGCGTCGGGCGGAGGAGGAGGCGGCGGTGGCTGCTGCAGCAGCAG
CAGCCGAGGCGCGTCGTGGGGAGGAGGAGGAGGAGGAGGAGAGTTATGAG
TTTGAGGAGTTCAACCCATACCTGTTCATCAAGCTGCTGCCGCCCTACCG
TGACGTGGCGCCGCGACACCGCAGGGTGCTACTGCCTGCAAAGAGCAGAG
GGGCGCCCAAGGTGAATTTGGTGCTGGATTTGGATGAGACGCTGGTGCAT
TGCTCCATTGAGCCCATTCCAGATGCCGATTTGCGCTTTCCAGTCGAATT
CAACGGGGCCACGTATCAAGTGTACGTCAGGAACCGGCCTTATGTGGACA
GGTTCCTGCGCCACGTGGCTTCTCGCTTCGAAGTGACCATCTTCACAGCC
TCCCAGAGAGTCTACGCCGAAAAACTCCTCGACCTGCTCGACCCAAGGCA
CGAACTCATCCACCACAGACTCTACCGC
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