mRNA_M-pyrifera_M_contig99779.22938.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig99779.22938.1 vs. uniprot
Match: A0A654AF63_9GAMM (Dipeptide transporter ATP-binding component of ABC superfamily n=22 Tax=root TaxID=1 RepID=A0A654AF63_9GAMM) HSP 1 Score: 428 bits (1101), Expect = 2.020e-149 Identity = 218/228 (95.61%), Postives = 224/228 (98.25%), Query Frame = 1 Query: 1 NFDGVDLLTVSERERSNLRGSRMAMIFQEPMTALNPAYTLGNQLCEALRRHQRVSRKAAHDRALYLLKRVGISAAEERMRQYPHQLSGGLRQRVMIAMALMCEPDLIIADEPTTALDVTIQAQILHLLRDLQQEFGTAVIFITHDLGVVARIADRVAVMYAGEVIETASAQALFHAPSHPYTQGLLRCIPTPGKTLPGSRLQAIPGVVPSLIDKVEGCAFCNRCDQAD 684 NFDGVDLLTV ER RSNLRG+RMAMIFQEPMTALNPAYTLGNQLCEALRRHQRVSR+AAHDRALYLLKRVGISAAEERMRQYPHQLSGGLRQRVMIAMALMCEPDLIIADEPTTALDVTIQAQILHLLRDLQQEFGTA+IFITHDLGVVARIADRVAVMYAGEVIETASAQALF APSHPYTQGLLRCIPTPGKTLPGSRLQAIPG+VPSL+ K+EGCAFCNRCDQAD Sbjct: 83 NFDGVDLLTVPERGRSNLRGARMAMIFQEPMTALNPAYTLGNQLCEALRRHQRVSRQAAHDRALYLLKRVGISAAEERMRQYPHQLSGGLRQRVMIAMALMCEPDLIIADEPTTALDVTIQAQILHLLRDLQQEFGTAIIFITHDLGVVARIADRVAVMYAGEVIETASAQALFKAPSHPYTQGLLRCIPTPGKTLPGSRLQAIPGIVPSLVGKIEGCAFCNRCDQAD 310
BLAST of mRNA_M-pyrifera_M_contig99779.22938.1 vs. uniprot
Match: A0A1U9RCH4_9GAMM (ABC transporter ATP-binding protein n=3 Tax=Halomonadaceae TaxID=28256 RepID=A0A1U9RCH4_9GAMM) HSP 1 Score: 418 bits (1074), Expect = 2.590e-145 Identity = 212/228 (92.98%), Postives = 222/228 (97.37%), Query Frame = 1 Query: 1 NFDGVDLLTVSERERSNLRGSRMAMIFQEPMTALNPAYTLGNQLCEALRRHQRVSRKAAHDRALYLLKRVGISAAEERMRQYPHQLSGGLRQRVMIAMALMCEPDLIIADEPTTALDVTIQAQILHLLRDLQQEFGTAVIFITHDLGVVARIADRVAVMYAGEVIETASAQALFHAPSHPYTQGLLRCIPTPGKTLPGSRLQAIPGVVPSLIDKVEGCAFCNRCDQAD 684 NFDG+DLLT++E ERSNLRG+RMAMIFQEPMTALNPAYTLGNQLCEALRRHQRVSRKAAHDRA+YLL+RVGISAA ERMRQYPHQLSGGLRQRVMIAMALMCEPDLIIADEPTTALDVTIQAQILHLLRDLQQEFGTAVIFITHDLGVVARIADRVAVMYAGEVIETASAQALF PSHPYTQGLLRCIP+PGKT PGSRLQAIPGVVPSL+ K++GCAFCNRCDQAD Sbjct: 83 NFDGIDLLTMTEHERSNLRGARMAMIFQEPMTALNPAYTLGNQLCEALRRHQRVSRKAAHDRAVYLLERVGISAATERMRQYPHQLSGGLRQRVMIAMALMCEPDLIIADEPTTALDVTIQAQILHLLRDLQQEFGTAVIFITHDLGVVARIADRVAVMYAGEVIETASAQALFKTPSHPYTQGLLRCIPSPGKTPPGSRLQAIPGVVPSLVGKLQGCAFCNRCDQAD 310
BLAST of mRNA_M-pyrifera_M_contig99779.22938.1 vs. uniprot
Match: A0A2A2EQS9_9GAMM (ABC transporter ATP-binding protein n=4 Tax=Halomonas TaxID=2745 RepID=A0A2A2EQS9_9GAMM) HSP 1 Score: 377 bits (967), Expect = 3.020e-129 Identity = 196/227 (86.34%), Postives = 210/227 (92.51%), Query Frame = 1 Query: 4 FDGVDLLTVSERERSNLRGSRMAMIFQEPMTALNPAYTLGNQLCEALRRHQRVSRKAAHDRALYLLKRVGISAAEERMRQYPHQLSGGLRQRVMIAMALMCEPDLIIADEPTTALDVTIQAQILHLLRDLQQEFGTAVIFITHDLGVVARIADRVAVMYAGEVIETASAQALFHAPSHPYTQGLLRCIPTPGKTLPGSRLQAIPGVVPSLIDKVEGCAFCNRCDQAD 684 FDG++LL ++ER RS+LRG+RMAMIFQEPMTALNPAYTLGNQLCEALRRH+RVSR A +RA+YLL+RVGISAA ERM QYPHQLSGGLRQRVMIAMALMCEPDLIIADEPTTALDVTIQAQIL LLRDLQ+EFGTAVIFITHDLGVVARIADRVAVMYAGEVIETASA+ALF APSHPYTQGLL CIP PGKT PGSRLQAIPGVVPSL+ VEGCAF NRC A+ Sbjct: 70 FDGMELLGLTERARSDLRGARMAMIFQEPMTALNPAYTLGNQLCEALRRHRRVSRGEARERAVYLLERVGISAAAERMDQYPHQLSGGLRQRVMIAMALMCEPDLIIADEPTTALDVTIQAQILRLLRDLQREFGTAVIFITHDLGVVARIADRVAVMYAGEVIETASAEALFAAPSHPYTQGLLNCIPAPGKTPPGSRLQAIPGVVPSLVGAVEGCAFRNRCPLAE 296
BLAST of mRNA_M-pyrifera_M_contig99779.22938.1 vs. uniprot
Match: UPI00201F15E3 (ABC transporter ATP-binding protein n=1 Tax=Halomonas olivaria TaxID=390919 RepID=UPI00201F15E3) HSP 1 Score: 373 bits (958), Expect = 1.260e-127 Identity = 187/228 (82.02%), Postives = 210/228 (92.11%), Query Frame = 1 Query: 1 NFDGVDLLTVSERERSNLRGSRMAMIFQEPMTALNPAYTLGNQLCEALRRHQRVSRKAAHDRALYLLKRVGISAAEERMRQYPHQLSGGLRQRVMIAMALMCEPDLIIADEPTTALDVTIQAQILHLLRDLQQEFGTAVIFITHDLGVVARIADRVAVMYAGEVIETASAQALFHAPSHPYTQGLLRCIPTPGKTLPGSRLQAIPGVVPSLIDKVEGCAFCNRCDQAD 684 NFDG +LL+++ER+RS LRGSRMAMIFQEPMTALNPAYTLGNQLCE LRRH++VSR+ A +RA+YLL +VGISAAEER+ QYPHQLSGGLRQR+MIAMALMCEPDLIIADEPTTALDVTIQAQIL LLRDLQ+EFGTA+IFITHDLGVVARIADRVAVMYAGE++ETA LF+AP HPYTQGL+ CIPTPGKT PGSRLQAIPGVVPSLI +V+GCAF NRC +A+ Sbjct: 82 NFDGAELLSLTERQRSGLRGSRMAMIFQEPMTALNPAYTLGNQLCEVLRRHRKVSRQQAKERAIYLLGKVGISAAEERLDQYPHQLSGGLRQRIMIAMALMCEPDLIIADEPTTALDVTIQAQILRLLRDLQREFGTAIIFITHDLGVVARIADRVAVMYAGEIVETADTTTLFNAPQHPYTQGLINCIPTPGKTPPGSRLQAIPGVVPSLIGEVKGCAFRNRCSRAE 309
BLAST of mRNA_M-pyrifera_M_contig99779.22938.1 vs. uniprot
Match: A0A1Q8STB4_9GAMM (ABC transporter ATP-binding protein n=11 Tax=Salinicola TaxID=404432 RepID=A0A1Q8STB4_9GAMM) HSP 1 Score: 360 bits (925), Expect = 6.840e-123 Identity = 184/226 (81.42%), Postives = 204/226 (90.27%), Query Frame = 1 Query: 4 FDGVDLLTVSERERSNLRGSRMAMIFQEPMTALNPAYTLGNQLCEALRRHQRVSRKAAHDRALYLLKRVGISAAEERMRQYPHQLSGGLRQRVMIAMALMCEPDLIIADEPTTALDVTIQAQILHLLRDLQQEFGTAVIFITHDLGVVARIADRVAVMYAGEVIETASAQALFHAPSHPYTQGLLRCIPTPGKTLPGSRLQAIPGVVPSLIDKVEGCAFCNRCDQA 681 FDG+DL T+SER RS+LRG+RM+MIFQEPMTALNPAYTLGNQLCE + RH+ VSR+ A +RA+YLL+RVGISAA++R+ QYPHQLSGGLRQRVMIAMALMCEPDLIIADEPTTALDVTIQAQIL LLR+LQQEFGTAVIFITHDLGVVARIADRV+VMYAGEVIE+A AL+ P HPYT+GLL CIP PGKT PGSRLQAIPGVVPSL+ VEGCAF NRC QA Sbjct: 70 FDGIDLTTLSERRRSDLRGARMSMIFQEPMTALNPAYTLGNQLCEGVIRHRGVSRREASERAIYLLERVGISAAKDRLNQYPHQLSGGLRQRVMIAMALMCEPDLIIADEPTTALDVTIQAQILRLLRELQQEFGTAVIFITHDLGVVARIADRVSVMYAGEVIESAPTPALYANPGHPYTRGLLSCIPAPGKTPPGSRLQAIPGVVPSLVGNVEGCAFRNRCPQA 295
BLAST of mRNA_M-pyrifera_M_contig99779.22938.1 vs. uniprot
Match: UPI0019936476 (ABC transporter ATP-binding protein n=1 Tax=Salinicola rhizosphaerae TaxID=1443141 RepID=UPI0019936476) HSP 1 Score: 355 bits (911), Expect = 9.180e-121 Identity = 185/226 (81.86%), Postives = 199/226 (88.05%), Query Frame = 1 Query: 4 FDGVDLLTVSERERSNLRGSRMAMIFQEPMTALNPAYTLGNQLCEALRRHQRVSRKAAHDRALYLLKRVGISAAEERMRQYPHQLSGGLRQRVMIAMALMCEPDLIIADEPTTALDVTIQAQILHLLRDLQQEFGTAVIFITHDLGVVARIADRVAVMYAGEVIETASAQALFHAPSHPYTQGLLRCIPTPGKTLPGSRLQAIPGVVPSLIDKVEGCAFCNRCDQA 681 FDG DL SER+RS+LRG R+AMIFQEPMTALNPAYTLGNQLCEA RH+ +R+AA RA++LL+RVGISAA ER+ QYPHQLSGGLRQRVMIAMALMCEPDLIIADEPTTALDVTIQAQIL LLR+LQQEFGTAVIFITHDLGVVARIADRVAVMYAGEVIE A AL+ PSHPYT+GLL CIP PGKT PGSRLQAIPGVVPSL+ VEGCAF NRC QA Sbjct: 70 FDGTDLTAASERQRSHLRGRRIAMIFQEPMTALNPAYTLGNQLCEAYLRHKLGNRRAARARAIHLLERVGISAAAERLNQYPHQLSGGLRQRVMIAMALMCEPDLIIADEPTTALDVTIQAQILRLLRELQQEFGTAVIFITHDLGVVARIADRVAVMYAGEVIEAAPTAALYANPSHPYTRGLLSCIPAPGKTPPGSRLQAIPGVVPSLVGHVEGCAFRNRCPQA 295
BLAST of mRNA_M-pyrifera_M_contig99779.22938.1 vs. uniprot
Match: UPI001E4613E5 (ABC transporter ATP-binding protein n=4 Tax=Salinicola TaxID=404432 RepID=UPI001E4613E5) HSP 1 Score: 352 bits (903), Expect = 1.910e-119 Identity = 183/223 (82.06%), Postives = 196/223 (87.89%), Query Frame = 1 Query: 4 FDGVDLLTVSERERSNLRGSRMAMIFQEPMTALNPAYTLGNQLCEALRRHQRVSRKAAHDRALYLLKRVGISAAEERMRQYPHQLSGGLRQRVMIAMALMCEPDLIIADEPTTALDVTIQAQILHLLRDLQQEFGTAVIFITHDLGVVARIADRVAVMYAGEVIETASAQALFHAPSHPYTQGLLRCIPTPGKTLPGSRLQAIPGVVPSLIDKVEGCAFCNRC 672 FDG L +SER R LRG RMAMIFQEPMTALNPAYTLGNQLCEA RH+ +R+ A +RA+ LL+RVGISAA ER+ QYPHQLSGGLRQRVMIAMALMC+PDLIIADEPTTALDVTIQAQIL LLRDLQQE GTAVIFITHDLGVVARIADRVAVMYAGEVIETA QAL+ PSHPYT+GLL CIP PGKTLPGSRLQAIPGVVPSL+ +VEGCAF NRC Sbjct: 70 FDGESLTALSERRRGQLRGRRMAMIFQEPMTALNPAYTLGNQLCEAFLRHRLGNRRQARERAIELLERVGISAAAERLAQYPHQLSGGLRQRVMIAMALMCDPDLIIADEPTTALDVTIQAQILRLLRDLQQELGTAVIFITHDLGVVARIADRVAVMYAGEVIETAPTQALYANPSHPYTRGLLSCIPAPGKTLPGSRLQAIPGVVPSLVGEVEGCAFRNRC 292
BLAST of mRNA_M-pyrifera_M_contig99779.22938.1 vs. uniprot
Match: A0A2S5KWY0_9PROT (ABC transporter ATP-binding protein n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2S5KWY0_9PROT) HSP 1 Score: 351 bits (901), Expect = 2.740e-119 Identity = 173/226 (76.55%), Postives = 202/226 (89.38%), Query Frame = 1 Query: 4 FDGVDLLTVSERERSNLRGSRMAMIFQEPMTALNPAYTLGNQLCEALRRHQRVSRKAAHDRALYLLKRVGISAAEERMRQYPHQLSGGLRQRVMIAMALMCEPDLIIADEPTTALDVTIQAQILHLLRDLQQEFGTAVIFITHDLGVVARIADRVAVMYAGEVIETASAQALFHAPSHPYTQGLLRCIPTPGKTLPGSRLQAIPGVVPSLIDKVEGCAFCNRCDQA 681 FDG DLLT+S++ER+ +RG RM+MIFQEPMT+LNP+YTLGNQLCE + +H+++SR A +RA+YLL+R G+ A ER+ QYPHQLSGGLRQRVMIAMALMCEPDLIIADEPTTALDVTIQAQIL L+R+LQQEFGTAVIFITHDLGVVARIADRVAVMYAG+V+ETASA+ LF +P HPYTQGLL CIP PG+T PGS LQAIPGVVPSL+ ++ GCAF NRCD+A Sbjct: 71 FDGTDLLTLSKKERNQIRGMRMSMIFQEPMTSLNPSYTLGNQLCEGILKHKKISRSEARERAIYLLERAGVPYAAERLEQYPHQLSGGLRQRVMIAMALMCEPDLIIADEPTTALDVTIQAQILRLIRELQQEFGTAVIFITHDLGVVARIADRVAVMYAGQVVETASARQLFSSPVHPYTQGLLNCIPVPGRTAPGSHLQAIPGVVPSLVGELLGCAFRNRCDRA 296
BLAST of mRNA_M-pyrifera_M_contig99779.22938.1 vs. uniprot
Match: A0A420X050_9GAMM (Peptide/nickel transport system ATP-binding protein n=1 Tax=Kushneria sinocarnis TaxID=595502 RepID=A0A420X050_9GAMM) HSP 1 Score: 348 bits (892), Expect = 7.570e-118 Identity = 175/227 (77.09%), Postives = 203/227 (89.43%), Query Frame = 1 Query: 4 FDGVDLLTVSERERSNLRGSRMAMIFQEPMTALNPAYTLGNQLCEALRRHQRVSRKAAHDRALYLLKRVGISAAEERMRQYPHQLSGGLRQRVMIAMALMCEPDLIIADEPTTALDVTIQAQILHLLRDLQQEFGTAVIFITHDLGVVARIADRVAVMYAGEVIETASAQALFHAPSHPYTQGLLRCIPTPGKTLPGSRLQAIPGVVPSLIDKVEGCAFCNRCDQAD 684 FDG+DL +SER RS+LRG+RMAM+FQEPMTALNPA+TLGNQL EALRRH+RVS++ A +RA+ LL+RVGI+AA ER+ QYPHQLSGGLRQRVMIAMALMC PDLI+ADEPTTALDVTIQAQIL L+R+LQQE GTAVIFITHDLGVVARIADRVAVMYAGEV+E+A +AL+ P HPYT+GLL CIP PG+T PGSRLQAI GVVPSL+ ++EGCAF NRC +A+ Sbjct: 70 FDGIDLTAISERRRSDLRGARMAMMFQEPMTALNPAWTLGNQLIEALRRHRRVSKRQARERAVELLERVGITAAAERLSQYPHQLSGGLRQRVMIAMALMCGPDLIVADEPTTALDVTIQAQILRLIRELQQEMGTAVIFITHDLGVVARIADRVAVMYAGEVVESAPVEALYARPGHPYTRGLLECIPAPGRTAPGSRLQAIDGVVPSLVGELEGCAFRNRCPRAE 296
BLAST of mRNA_M-pyrifera_M_contig99779.22938.1 vs. uniprot
Match: A0A1I2ETA2_9BURK (Peptide/nickel transport system ATP-binding protein n=3 Tax=Acidovorax TaxID=12916 RepID=A0A1I2ETA2_9BURK) HSP 1 Score: 347 bits (890), Expect = 1.380e-117 Identity = 175/226 (77.43%), Postives = 195/226 (86.28%), Query Frame = 1 Query: 4 FDGVDLLTVSERERSNLRGSRMAMIFQEPMTALNPAYTLGNQLCEALRRHQRVSRKAAHDRALYLLKRVGISAAEERMRQYPHQLSGGLRQRVMIAMALMCEPDLIIADEPTTALDVTIQAQILHLLRDLQQEFGTAVIFITHDLGVVARIADRVAVMYAGEVIETASAQALFHAPSHPYTQGLLRCIPTPGKTLPGSRLQAIPGVVPSLIDKVEGCAFCNRCDQA 681 FDG+DL ER S LRG+RM+MIFQEPMT+LNP+YTLG+QLCEALR H++ + A +RALYLL+R G+ A +R+RQYPHQLSGGLRQRVMIAMALMC PDLIIADEPTTALDVTIQAQIL L+R+LQQEFGTAV+FITHDLGVVARIADRVAVMYAGEV+ETA LF PSHPYTQGLLRCIP GKTLPGSRLQAIPGVVPSL+ V+GCAF NRC QA Sbjct: 71 FDGIDLQAQDERGMSRLRGARMSMIFQEPMTSLNPSYTLGDQLCEALRAHRKATAAEARERALYLLERAGVPQAADRLRQYPHQLSGGLRQRVMIAMALMCGPDLIIADEPTTALDVTIQAQILRLIRELQQEFGTAVVFITHDLGVVARIADRVAVMYAGEVVETAPVDQLFEQPSHPYTQGLLRCIPVRGKTLPGSRLQAIPGVVPSLVGDVQGCAFANRCSQA 296 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99779.22938.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig99779.22938.1 >prot_M-pyrifera_M_contig99779.22938.1 ID=prot_M-pyrifera_M_contig99779.22938.1|Name=mRNA_M-pyrifera_M_contig99779.22938.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=228bp NFDGVDLLTVSERERSNLRGSRMAMIFQEPMTALNPAYTLGNQLCEALRRback to top mRNA from alignment at M-pyrifera_M_contig99779:1..684- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig99779.22938.1 ID=mRNA_M-pyrifera_M_contig99779.22938.1|Name=mRNA_M-pyrifera_M_contig99779.22938.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=684bp|location=Sequence derived from alignment at M-pyrifera_M_contig99779:1..684- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig99779:1..684- >mRNA_M-pyrifera_M_contig99779.22938.1 ID=mRNA_M-pyrifera_M_contig99779.22938.1|Name=mRNA_M-pyrifera_M_contig99779.22938.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1368bp|location=Sequence derived from alignment at M-pyrifera_M_contig99779:1..684- (Macrocystis pyrifera P11B4 male)back to top |