mRNA_M-pyrifera_M_contig99778.22937.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig99778.22937.1
Unique NamemRNA_M-pyrifera_M_contig99778.22937.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig99778.22937.1 vs. uniprot
Match: A0A7V2RN61_9BACT (Pyruvate ferredoxin oxidoreductase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7V2RN61_9BACT)

HSP 1 Score: 399 bits (1025), Expect = 9.530e-126
Identity = 188/228 (82.46%), Postives = 212/228 (92.98%), Query Frame = 1
Query:    1 KSVVHLFTATVESLMQPRIKKHIDYLDELIKRLERHIQSKLISTVNLSDTDMMSKIVNDMHDSDLTISEIASRIESEKGSEPIDQDWLMEVTQLLAQLRQLKWKYTDGTTGKGRSNMGMTNSTGCTSVWGSTYPYNPYPFPWANHLFQDSTSMAMGIFEGHMAKMADGFKAIRKAELKLRGKYDSSVHDDFFTYFNWEQFTDEEWLLCPPVVALGGDGAMYDIGFQNL 684
            KSVVHLFTATVESLMQPRI+KH+ +LDEL K+LE+HIQ KL+STV++SD D MSKIV+DMH+SDLT++ IASR+ES +GSEPIDQDWL + TQLLA+L++LKWKYT+GTTGKGRSNMGM NSTGCTSVWGST+PYNPYPFPWANHLFQDS SMAMGIFEGHMAKMA+GFK IRKAEL+L G YD+S HDDFFTYF W+QFTDEEWLLCPPVVALGGDGAMYDIGFQNL
Sbjct: 1007 KSVVHLFTATVESLMQPRIEKHVAHLDELCKKLEKHIQLKLMSTVDISDADTMSKIVSDMHESDLTMAGIASRLESAQGSEPIDQDWLRKTTQLLAKLKKLKWKYTNGTTGKGRSNMGMCNSTGCTSVWGSTWPYNPYPFPWANHLFQDSASMAMGIFEGHMAKMAEGFKTIRKAELELNGTYDASKHDDFFTYFTWQQFTDEEWLLCPPVVALGGDGAMYDIGFQNL 1234          
BLAST of mRNA_M-pyrifera_M_contig99778.22937.1 vs. uniprot
Match: A0A0C1YA47_9CYAN (Pyruvate ferredoxin oxidoreductase (Fragment) n=1 Tax=Lyngbya confervoides BDU141951 TaxID=1574623 RepID=A0A0C1YA47_9CYAN)

HSP 1 Score: 375 bits (963), Expect = 2.320e-125
Identity = 176/224 (78.57%), Postives = 199/224 (88.84%), Query Frame = 1
Query:    1 KSVVHLFTATVESLMQPRIKKHIDYLDELIKRLERHIQSKLISTVNLSDTDMMSKIVNDMHDSDLTISEIASRIESEKGSEPIDQDWLMEVTQLLAQLRQLKWKYTDGTTGKGRSNMGMTNSTGCTSVWGSTYPYNPYPFPWANHLFQDSTSMAMGIFEGHMAKMADGFKAIRKAELKLRGKYDSSVHDDFFTYFNWEQFTDEEWLLCPPVVALGGDGAMYDIG 672
            KSVVH+FTATVE+LMQPRIK+H+  L ELI RLE+HIQ KL STVN+ D D+M+KIV++M   DLT+S IASR ESEKG++PIDQ+WL EV+QLLA+L+ LKWKYTDG TGKGR+NMGM NSTGCTSVWGSTYPYNPYPFPWANHLFQDS SMAMG+FEGHM+KMA+GF+ IRKAEL L GKYD S HD F TYFNW+QFTDEEWLLCPPVVALGGDGAMYDIG
Sbjct:  347 KSVVHIFTATVEALMQPRIKQHVTRLTELINRLEQHIQQKLFSTVNVGDADLMTKIVSEMSSGDLTVSGIASRFESEKGTQPIDQEWLREVSQLLAKLKNLKWKYTDGLTGKGRTNMGMLNSTGCTSVWGSTYPYNPYPFPWANHLFQDSPSMAMGVFEGHMSKMAEGFRTIRKAELMLDGKYDPSEHDSFLTYFNWKQFTDEEWLLCPPVVALGGDGAMYDIG 570          
BLAST of mRNA_M-pyrifera_M_contig99778.22937.1 vs. uniprot
Match: A0A553EXX4_9BACT (Pyruvate ferredoxin oxidoreductase n=1 Tax=Fulvivirga sp. M361 TaxID=2594266 RepID=A0A553EXX4_9BACT)

HSP 1 Score: 391 bits (1005), Expect = 6.130e-123
Identity = 183/228 (80.26%), Postives = 209/228 (91.67%), Query Frame = 1
Query:    1 KSVVHLFTATVESLMQPRIKKHIDYLDELIKRLERHIQSKLISTVNLSDTDMMSKIVNDMHDSDLTISEIASRIESEKGSEPIDQDWLMEVTQLLAQLRQLKWKYTDGTTGKGRSNMGMTNSTGCTSVWGSTYPYNPYPFPWANHLFQDSTSMAMGIFEGHMAKMADGFKAIRKAELKLRGKYDSSVHDDFFTYFNWEQFTDEEWLLCPPVVALGGDGAMYDIGFQNL 684
            KSVVHLF ATVE+L+QPRIKKHI YLDEL ++LE+HIQ +L++TVN+ D DMMSKI+ +  DSDLT+S IA R+E+EKGSEPIDQ+WL EVTQLLA+L+QLKWKYTDG TGKGRS+MGMTN+TGCTSVWGST+P+NPYPFPWANHLFQDSTSMAMGIFEGHMAKMA+GFK IRK EL+L G Y+ + HDDFFTYFNWEQF+DEEWLLCPPVVALGGDGAMYDIGFQNL
Sbjct: 1005 KSVVHLFVATVEALIQPRIKKHIAYLDELTEKLEKHIQLRLMNTVNVGDADMMSKIIAETKDSDLTMSGIAGRLETEKGSEPIDQEWLQEVTQLLAKLKQLKWKYTDGATGKGRSSMGMTNATGCTSVWGSTWPFNPYPFPWANHLFQDSTSMAMGIFEGHMAKMAEGFKTIRKTELELSGSYNPAEHDDFFTYFNWEQFSDEEWLLCPPVVALGGDGAMYDIGFQNL 1232          
BLAST of mRNA_M-pyrifera_M_contig99778.22937.1 vs. uniprot
Match: A0A3Q9FUT3_9BACT (Pyruvate ferredoxin oxidoreductase n=3 Tax=Flammeovirga TaxID=59739 RepID=A0A3Q9FUT3_9BACT)

HSP 1 Score: 390 bits (1002), Expect = 1.370e-122
Identity = 182/228 (79.82%), Postives = 207/228 (90.79%), Query Frame = 1
Query:    1 KSVVHLFTATVESLMQPRIKKHIDYLDELIKRLERHIQSKLISTVNLSDTDMMSKIVNDMHDSDLTISEIASRIESEKGSEPIDQDWLMEVTQLLAQLRQLKWKYTDGTTGKGRSNMGMTNSTGCTSVWGSTYPYNPYPFPWANHLFQDSTSMAMGIFEGHMAKMADGFKAIRKAELKLRGKYDSSVHDDFFTYFNWEQFTDEEWLLCPPVVALGGDGAMYDIGFQNL 684
            K+VVHLFTATV+SLM PRI+KHI+YLDELI ++ERH+Q KL+ TVNLSD DMMSKIV +M DSDLT++EI SRIE EKGSEPIDQ+WL   +QL+AQL+QLKW+YT GTTG GR+NMGMTN+TGCTSVWGSTYPYNPYPFPWANHLFQDSTS+AMGIFEGHM+KMAD F+ IRKAEL+L G Y++S HDDFFTYF WEQFTDEEW LCPPVVALGGDG+MYDIGFQNL
Sbjct:  987 KTVVHLFTATVQSLMMPRIEKHINYLDELIVKMERHLQVKLMDTVNLSDADMMSKIVAEMQDSDLTMAEITSRIEQEKGSEPIDQEWLRNTSQLIAQLKQLKWRYTSGTTGDGRANMGMTNATGCTSVWGSTYPYNPYPFPWANHLFQDSTSLAMGIFEGHMSKMADSFRTIRKAELELSGDYNTSEHDDFFTYFTWEQFTDEEWHLCPPVVALGGDGSMYDIGFQNL 1214          
BLAST of mRNA_M-pyrifera_M_contig99778.22937.1 vs. uniprot
Match: A0A1H9FB10_9FLAO (Pyruvate-ferredoxin/flavodoxin oxidoreductase n=7 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A1H9FB10_9FLAO)

HSP 1 Score: 389 bits (1000), Expect = 3.320e-122
Identity = 182/228 (79.82%), Postives = 210/228 (92.11%), Query Frame = 1
Query:    1 KSVVHLFTATVESLMQPRIKKHIDYLDELIKRLERHIQSKLISTVNLSDTDMMSKIVNDMHDSDLTISEIASRIESEKGSEPIDQDWLMEVTQLLAQLRQLKWKYTDGTTGKGRSNMGMTNSTGCTSVWGSTYPYNPYPFPWANHLFQDSTSMAMGIFEGHMAKMADGFKAIRKAELKLRGKYDSSVHDDFFTYFNWEQFTDEEWLLCPPVVALGGDGAMYDIGFQNL 684
            KSVVH+FTATVESLMQPRI KH+ +L+EL  +LE+HIQ KL++ VNL+D+D MSKIV +M +SDLT++EI  R+ESE+G EP+DQ+WL  VTQLLAQL++LKWKYT+G TGKGRSNMGM NSTGCTSVWGST+P+NPYPFPWANHLFQDSTSMAMGIFEGHMAKMADGF+AIRKAEL+L GKYD+S HD+FFTYFNW+QFTDEEWLLCPPVVALGGDGAMYDIGFQNL
Sbjct: 1016 KSVVHIFTATVESLMQPRIAKHMAHLEELTDKLEKHIQVKLMNRVNLTDSDTMSKIVAEMQNSDLTMAEITRRLESEQGGEPVDQEWLRNVTQLLAQLKKLKWKYTNGATGKGRSNMGMLNSTGCTSVWGSTWPFNPYPFPWANHLFQDSTSMAMGIFEGHMAKMADGFRAIRKAELELEGKYDASEHDEFFTYFNWQQFTDEEWLLCPPVVALGGDGAMYDIGFQNL 1243          
BLAST of mRNA_M-pyrifera_M_contig99778.22937.1 vs. uniprot
Match: A0A1X7IEJ6_9BACT (Pyruvate-ferredoxin/flavodoxin oxidoreductase n=1 Tax=Marivirga sericea TaxID=1028 RepID=A0A1X7IEJ6_9BACT)

HSP 1 Score: 387 bits (995), Expect = 1.730e-121
Identity = 180/228 (78.95%), Postives = 207/228 (90.79%), Query Frame = 1
Query:    1 KSVVHLFTATVESLMQPRIKKHIDYLDELIKRLERHIQSKLISTVNLSDTDMMSKIVNDMHDSDLTISEIASRIESEKGSEPIDQDWLMEVTQLLAQLRQLKWKYTDGTTGKGRSNMGMTNSTGCTSVWGSTYPYNPYPFPWANHLFQDSTSMAMGIFEGHMAKMADGFKAIRKAELKLRGKYDSSVHDDFFTYFNWEQFTDEEWLLCPPVVALGGDGAMYDIGFQNL 684
            KSVVHLFTAT+ESLMQPRIKKHI YLD+LIK++E+HIQ++LI  VN++DTD + +I+ D HDSDLT+S IA+++E+E+GS+PIDQDWL E T  L+QL++LKWKYTDGTTGKGRS+MGMTN+TGCTSVWGSTYPYNPYPFPWANHLFQDSTSMAMGIFEGHMAKMA+GF  IRKAEL+L+GKY      DFFTYFNW QFTDEEWLLCPPVVALGGDGAMYDIGFQNL
Sbjct: 1004 KSVVHLFTATLESLMQPRIKKHIAYLDDLIKQMEQHIQARLIENVNINDTDAIERILKDTHDSDLTMSGIAAKLEAERGSKPIDQDWLKETTHTLSQLKRLKWKYTDGTTGKGRSSMGMTNATGCTSVWGSTYPYNPYPFPWANHLFQDSTSMAMGIFEGHMAKMAEGFTTIRKAELELKGKYRPEEDKDFFTYFNWHQFTDEEWLLCPPVVALGGDGAMYDIGFQNL 1231          
BLAST of mRNA_M-pyrifera_M_contig99778.22937.1 vs. uniprot
Match: A0A098SBT9_9BACT (Pyruvate ferredoxin oxidoreductase n=1 Tax=Phaeodactylibacter xiamenensis TaxID=1524460 RepID=A0A098SBT9_9BACT)

HSP 1 Score: 387 bits (993), Expect = 3.070e-121
Identity = 182/228 (79.82%), Postives = 204/228 (89.47%), Query Frame = 1
Query:    1 KSVVHLFTATVESLMQPRIKKHIDYLDELIKRLERHIQSKLISTVNLSDTDMMSKIVNDMHDSDLTISEIASRIESEKGSEPIDQDWLMEVTQLLAQLRQLKWKYTDGTTGKGRSNMGMTNSTGCTSVWGSTYPYNPYPFPWANHLFQDSTSMAMGIFEGHMAKMADGFKAIRKAELKLRGKYDSSVHDDFFTYFNWEQFTDEEWLLCPPVVALGGDGAMYDIGFQNL 684
            KSVVH+FTATVE+LMQPRI++H+  L ELI RLE+HIQ KL STVN+SD D+M+KIV++M   DLT+S IASR ESEKG++PIDQ+WL EV+QLLA+L+ LKWKYTDG TGKGR+NMGM NSTGCTSVWGSTYPYNPYPFPWANHLFQDS SMAMG+FEGHMAKMA+GFK IRKAEL L GKYD S HD F TYFNW+QFTDEEWLLCPPVVALGGDGAMYDIGFQNL
Sbjct: 1005 KSVVHIFTATVEALMQPRIRQHVTRLTELINRLEQHIQQKLFSTVNVSDADLMTKIVSEMSSGDLTVSGIASRFESEKGTQPIDQEWLREVSQLLAKLKNLKWKYTDGLTGKGRTNMGMLNSTGCTSVWGSTYPYNPYPFPWANHLFQDSPSMAMGVFEGHMAKMAEGFKTIRKAELMLDGKYDPSEHDSFLTYFNWKQFTDEEWLLCPPVVALGGDGAMYDIGFQNL 1232          
BLAST of mRNA_M-pyrifera_M_contig99778.22937.1 vs. uniprot
Match: A0A150A9T8_9BACT (Pyruvate ferredoxin oxidoreductase n=6 Tax=Flammeovirga TaxID=59739 RepID=A0A150A9T8_9BACT)

HSP 1 Score: 386 bits (992), Expect = 4.080e-121
Identity = 175/228 (76.75%), Postives = 207/228 (90.79%), Query Frame = 1
Query:    1 KSVVHLFTATVESLMQPRIKKHIDYLDELIKRLERHIQSKLISTVNLSDTDMMSKIVNDMHDSDLTISEIASRIESEKGSEPIDQDWLMEVTQLLAQLRQLKWKYTDGTTGKGRSNMGMTNSTGCTSVWGSTYPYNPYPFPWANHLFQDSTSMAMGIFEGHMAKMADGFKAIRKAELKLRGKYDSSVHDDFFTYFNWEQFTDEEWLLCPPVVALGGDGAMYDIGFQNL 684
            K+VVHLFTATVESLM PR++KH+ YLDELI ++E H+Q+KL+ TVNL+DTDMMSKIV +M D DLT+++I +R E EKGSEPIDQ+WL   +QL+AQL+QLKWKYT GTTG+GRSNMG+ N+TGCTSVWGSTYPYNPYPFPWANHLFQDSTS+AMG+FEGHM KMA+GFKAIRKAEL+L G+Y+ + HDDFFTYFNWEQF+D+EW LCPPVVALGGDG+MYDIGFQNL
Sbjct: 1006 KTVVHLFTATVESLMNPRVEKHVKYLDELIGKMENHLQTKLVGTVNLNDTDMMSKIVTEMQDKDLTMADITNRFEEEKGSEPIDQEWLRNTSQLIAQLKQLKWKYTQGTTGEGRSNMGICNATGCTSVWGSTYPYNPYPFPWANHLFQDSTSLAMGVFEGHMVKMAEGFKAIRKAELELSGEYNPAEHDDFFTYFNWEQFSDDEWHLCPPVVALGGDGSMYDIGFQNL 1233          
BLAST of mRNA_M-pyrifera_M_contig99778.22937.1 vs. uniprot
Match: A0A1B1G1I6_9BACT (Pyruvate ferredoxin oxidoreductase n=5 Tax=Flammeovirga TaxID=59739 RepID=A0A1B1G1I6_9BACT)

HSP 1 Score: 385 bits (988), Expect = 1.270e-120
Identity = 178/228 (78.07%), Postives = 205/228 (89.91%), Query Frame = 1
Query:    1 KSVVHLFTATVESLMQPRIKKHIDYLDELIKRLERHIQSKLISTVNLSDTDMMSKIVNDMHDSDLTISEIASRIESEKGSEPIDQDWLMEVTQLLAQLRQLKWKYTDGTTGKGRSNMGMTNSTGCTSVWGSTYPYNPYPFPWANHLFQDSTSMAMGIFEGHMAKMADGFKAIRKAELKLRGKYDSSVHDDFFTYFNWEQFTDEEWLLCPPVVALGGDGAMYDIGFQNL 684
            KSVVHLFTATVESLM PR+KKH+ Y+ ELI +LE+HIQ KL+ TVNL+D D+M+ IV +M D+DLT+S I SRIES KG+ PIDQ+W   VTQL+AQL+QLKWKY  GTTG+GRS+MGMTN+TGCTSVWGSTYPYNPYPFPWANHLFQDSTS+AMGIFEGHMAKMADGFKA+RKAEL+L G+YD+  HDDFFTYFNWEQF+D+EW LCPPVVALGGDG+MYDIGFQNL
Sbjct:  988 KSVVHLFTATVESLMMPRVKKHVAYIGELIGKLEKHIQLKLMETVNLNDADLMADIVTEMSDTDLTMSSITSRIESAKGTAPIDQEWFRNVTQLMAQLKQLKWKYEQGTTGRGRSSMGMTNATGCTSVWGSTYPYNPYPFPWANHLFQDSTSLAMGIFEGHMAKMADGFKAVRKAELELAGEYDADKHDDFFTYFNWEQFSDDEWHLCPPVVALGGDGSMYDIGFQNL 1215          
BLAST of mRNA_M-pyrifera_M_contig99778.22937.1 vs. uniprot
Match: A0A099XZ82_9FLAO (Pyruvate-flavodoxin oxidoreductase n=2 Tax=unclassified Polaribacter TaxID=196858 RepID=A0A099XZ82_9FLAO)

HSP 1 Score: 383 bits (983), Expect = 8.470e-120
Identity = 178/228 (78.07%), Postives = 210/228 (92.11%), Query Frame = 1
Query:    1 KSVVHLFTATVESLMQPRIKKHIDYLDELIKRLERHIQSKLISTVNLSDTDMMSKIVNDMHDSDLTISEIASRIESEKGSEPIDQDWLMEVTQLLAQLRQLKWKYTDGTTGKGRSNMGMTNSTGCTSVWGSTYPYNPYPFPWANHLFQDSTSMAMGIFEGHMAKMADGFKAIRKAELKLRGKYDSSVHDDFFTYFNWEQFTDEEWLLCPPVVALGGDGAMYDIGFQNL 684
            KSVVH+FTATVESLMQPRI+KH+ Y+D L  +LE+HIQ KL+++++L+D+++M+KIV +M +SDLT++EI  R+ESE  SEPIDQ+WL  VTQLLAQL++LKWKYT+GTTGKGRSNMGM NSTGCTSVWGS++P+NPYPFPWANHLFQDSTSMAMG+FEGHMAKMADGFKAIRKAEL+L GKY++  HDDFFTYF WEQFTDEEWLLCPPVVALGGDGAMYDIGFQNL
Sbjct: 1024 KSVVHIFTATVESLMQPRIEKHMAYIDGLTAKLEKHIQVKLMNSLDLTDSEIMTKIVKEMQNSDLTMAEITRRLESEHDSEPIDQEWLRNVTQLLAQLKKLKWKYTNGTTGKGRSNMGMLNSTGCTSVWGSSWPFNPYPFPWANHLFQDSTSMAMGVFEGHMAKMADGFKAIRKAELELAGKYNAEEHDDFFTYFKWEQFTDEEWLLCPPVVALGGDGAMYDIGFQNL 1251          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99778.22937.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7V2RN61_9BACT9.530e-12682.46Pyruvate ferredoxin oxidoreductase n=1 Tax=Bactero... [more]
A0A0C1YA47_9CYAN2.320e-12578.57Pyruvate ferredoxin oxidoreductase (Fragment) n=1 ... [more]
A0A553EXX4_9BACT6.130e-12380.26Pyruvate ferredoxin oxidoreductase n=1 Tax=Fulvivi... [more]
A0A3Q9FUT3_9BACT1.370e-12279.82Pyruvate ferredoxin oxidoreductase n=3 Tax=Flammeo... [more]
A0A1H9FB10_9FLAO3.320e-12279.82Pyruvate-ferredoxin/flavodoxin oxidoreductase n=7 ... [more]
A0A1X7IEJ6_9BACT1.730e-12178.95Pyruvate-ferredoxin/flavodoxin oxidoreductase n=1 ... [more]
A0A098SBT9_9BACT3.070e-12179.82Pyruvate ferredoxin oxidoreductase n=1 Tax=Phaeoda... [more]
A0A150A9T8_9BACT4.080e-12176.75Pyruvate ferredoxin oxidoreductase n=6 Tax=Flammeo... [more]
A0A1B1G1I6_9BACT1.270e-12078.07Pyruvate ferredoxin oxidoreductase n=5 Tax=Flammeo... [more]
A0A099XZ82_9FLAO8.470e-12078.07Pyruvate-flavodoxin oxidoreductase n=2 Tax=unclass... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99778contigM-pyrifera_M_contig99778:1..684 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score387.9
Seed ortholog evalue3.3e-105
Seed eggNOG ortholog1250005.PHEL85_1694
Preferred namenifJ
KEGG rclassRC00004,RC02742
KEGG koko:K03737
KEGG ReactionR01196,R10866
KEGG Pathwayko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200
KEGG ModuleM00173,M00307
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
EggNOG OGs1HXEG@117743,4NF4F@976,COG0674@1,COG0674@2,COG1013@1,COG1013@2,COG1014@1,COG1014@2,COG1145@1,COG1145@2,COG1146@1,COG1146@2
EC1.2.7.1
COG Functional cat.C
Best tax levelFlavobacteriia
Best eggNOG OGNA|NA|NA
BRITEbr01601,ko00000,ko00001,ko00002,ko01000
Exons1
Model size684
Cds size684
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816914.8149047-CDS-M-pyrifera_M_contig99778:0..6841622816914.8149047-CDS-M-pyrifera_M_contig99778:0..684Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99778 1..684 -
1692278252.8843386-CDS-M-pyrifera_M_contig99778:0..6841692278252.8843386-CDS-M-pyrifera_M_contig99778:0..684Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99778 1..684 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99778.22937.1prot_M-pyrifera_M_contig99778.22937.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig99778 1..684 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig99778.22937.1

>prot_M-pyrifera_M_contig99778.22937.1 ID=prot_M-pyrifera_M_contig99778.22937.1|Name=mRNA_M-pyrifera_M_contig99778.22937.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=228bp
KSVVHLFTATVESLMQPRIKKHIDYLDELIKRLERHIQSKLISTVNLSDT
DMMSKIVNDMHDSDLTISEIASRIESEKGSEPIDQDWLMEVTQLLAQLRQ
LKWKYTDGTTGKGRSNMGMTNSTGCTSVWGSTYPYNPYPFPWANHLFQDS
TSMAMGIFEGHMAKMADGFKAIRKAELKLRGKYDSSVHDDFFTYFNWEQF
TDEEWLLCPPVVALGGDGAMYDIGFQNL
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mRNA from alignment at M-pyrifera_M_contig99778:1..684-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig99778.22937.1 ID=mRNA_M-pyrifera_M_contig99778.22937.1|Name=mRNA_M-pyrifera_M_contig99778.22937.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=684bp|location=Sequence derived from alignment at M-pyrifera_M_contig99778:1..684- (Macrocystis pyrifera P11B4 male)
AAATCAGTGGTACATCTGTTTACCGCTACCGTGGAGTCTCTCATGCAACC CAGGATCAAAAAACATATAGACTATTTAGATGAGCTCATAAAAAGACTAG AAAGGCATATTCAGTCCAAACTCATTAGTACGGTCAATCTAAGCGATACC GATATGATGTCTAAGATTGTCAACGATATGCACGACAGCGATTTGACCAT TTCTGAAATCGCCAGTAGAATAGAAAGTGAAAAAGGCAGCGAACCTATAG ATCAGGATTGGTTGATGGAAGTCACCCAGCTACTCGCTCAACTGAGACAA TTGAAATGGAAATATACAGACGGTACTACTGGTAAAGGTCGGTCCAACAT GGGCATGACCAACTCCACAGGTTGTACTTCAGTCTGGGGAAGCACCTATC CCTACAACCCCTATCCTTTCCCATGGGCCAACCACTTGTTTCAAGATTCA ACTTCTATGGCCATGGGCATATTTGAGGGACACATGGCTAAAATGGCCGA TGGATTCAAAGCCATCCGAAAAGCCGAACTTAAATTGAGAGGTAAATATG ATTCATCAGTACACGATGATTTCTTCACCTATTTCAATTGGGAGCAATTT ACAGATGAAGAATGGCTTCTCTGCCCTCCAGTCGTAGCCTTAGGTGGTGA TGGTGCCATGTATGACATCGGTTTCCAAAATTTA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig99778:1..684-

>mRNA_M-pyrifera_M_contig99778.22937.1 ID=mRNA_M-pyrifera_M_contig99778.22937.1|Name=mRNA_M-pyrifera_M_contig99778.22937.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1368bp|location=Sequence derived from alignment at M-pyrifera_M_contig99778:1..684- (Macrocystis pyrifera P11B4 male)
AAATCAGTGGTACATCTGTTTACCGCTACCGTGGAGTCTCTCATGCAACC
CAGGATCAAAAAACATATAGACTATTTAGATGAGCTCATAAAAAGACTAG
AAAGGCATATTCAGTCCAAACTCATTAGTACGGTCAATCTAAGCGATACC
GATATGATGTCTAAGATTGTCAACGATATGCACGACAGCGATTTGACCAT
TTCTGAAATCGCCAGTAGAATAGAAAGTGAAAAAGGCAGCGAACCTATAG
ATCAGGATTGGTTGATGGAAGTCACCCAGCTACTCGCTCAACTGAGACAA
TTGAAATGGAAATATACAGACGGTACTACTGGTAAAGGTCGGTCCAACAT
GGGCATGACCAACTCCACAGGTTGTACTTCAGTCTGGGGAAGCACCTATC
CCTACAACCCCTATCCTTTCCCATGGGCCAACCACTTGTTTCAAGATTCA
ACTTCTATGGCCATGGGCATATTTGAGGGACACATGGCTAAAATGGCCGA
TGGATTCAAAGCCATCCGAAAAGCCGAACTTAAATTGAGAGGTAAATATG
ATTCATCAGTACACGATGATTTCTTCACCTATTTCAATTGGGAGCAATTT
ACAGATGAAGAATGGCTTCTCTGCCCTCCAGTCGTAGCCTTAGGTGGTGA
TGGTGCCATGTATGACATCGGTTTCCAAAATTTAAAATCAGTGGTACATC
TGTTTACCGCTACCGTGGAGTCTCTCATGCAACCCAGGATCAAAAAACAT
ATAGACTATTTAGATGAGCTCATAAAAAGACTAGAAAGGCATATTCAGTC
CAAACTCATTAGTACGGTCAATCTAAGCGATACCGATATGATGTCTAAGA
TTGTCAACGATATGCACGACAGCGATTTGACCATTTCTGAAATCGCCAGT
AGAATAGAAAGTGAAAAAGGCAGCGAACCTATAGATCAGGATTGGTTGAT
GGAAGTCACCCAGCTACTCGCTCAACTGAGACAATTGAAATGGAAATATA
CAGACGGTACTACTGGTAAAGGTCGGTCCAACATGGGCATGACCAACTCC
ACAGGTTGTACTTCAGTCTGGGGAAGCACCTATCCCTACAACCCCTATCC
TTTCCCATGGGCCAACCACTTGTTTCAAGATTCAACTTCTATGGCCATGG
GCATATTTGAGGGACACATGGCTAAAATGGCCGATGGATTCAAAGCCATC
CGAAAAGCCGAACTTAAATTGAGAGGTAAATATGATTCATCAGTACACGA
TGATTTCTTCACCTATTTCAATTGGGAGCAATTTACAGATGAAGAATGGC
TTCTCTGCCCTCCAGTCGTAGCCTTAGGTGGTGATGGTGCCATGTATGAC
ATCGGTTTCCAAAATTTA
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