mRNA_M-pyrifera_M_contig99752.22927.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig99752.22927.1
Unique NamemRNA_M-pyrifera_M_contig99752.22927.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig99752.22927.1 vs. uniprot
Match: A0A6A6Z4L1_9PEZI (1-phosphatidylinositol-3-phosphate 5-kinase n=2 Tax=Mytilinidiaceae TaxID=281242 RepID=A0A6A6Z4L1_9PEZI)

HSP 1 Score: 61.2 bits (147), Expect = 1.220e-9
Identity = 22/41 (53.66%), Postives = 30/41 (73.17%), Query Frame = 1 
Query:    1 LPQSKWMRDEDARFCCHCNTVFSVLNRRHHCRACGKVFDAR 123
            LP+  WMRDE+A+ C +C   FS   R+HHCR CG++FDA+
Sbjct:  404 LPKEFWMRDENAKDCFYCGDAFSTFRRKHHCRTCGQIFDAK 444
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BLAST of mRNA_M-pyrifera_M_contig99752.22927.1 vs. uniprot
Match: A0A6A5YC98_9PEZI (1-phosphatidylinositol-3-phosphate 5-kinase n=1 Tax=Saccharata proteae CBS 121410 TaxID=1314787 RepID=A0A6A5YC98_9PEZI)

HSP 1 Score: 59.7 bits (143), Expect = 4.280e-9
Identity = 22/41 (53.66%), Postives = 30/41 (73.17%), Query Frame = 1 
Query:    1 LPQSKWMRDEDARFCCHCNTVFSVLNRRHHCRACGKVFDAR 123
            L +  WMRDE+A+ C +C  VFS   R+HHCR CG++FDA+
Sbjct:  445 LSKEFWMRDENAKDCFYCGEVFSTFRRKHHCRTCGQIFDAK 485
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BLAST of mRNA_M-pyrifera_M_contig99752.22927.1 vs. uniprot
Match: T5C1F6_AJEDE (1-phosphatidylinositol-3-phosphate 5-kinase n=6 Tax=Blastomyces TaxID=229219 RepID=T5C1F6_AJEDE)

HSP 1 Score: 59.7 bits (143), Expect = 4.280e-9
Identity = 22/41 (53.66%), Postives = 29/41 (70.73%), Query Frame = 1 
Query:    1 LPQSKWMRDEDARFCCHCNTVFSVLNRRHHCRACGKVFDAR 123
            L +  WMRDE+A+ C HC   FS   R+HHCR CG++FDA+
Sbjct:  494 LSKEFWMRDENAKDCFHCGEPFSTFRRKHHCRTCGQIFDAK 534
[Close]
BLAST of mRNA_M-pyrifera_M_contig99752.22927.1 vs. uniprot
Match: A0A1J9Q618_9EURO (1-phosphatidylinositol-3-phosphate 5-kinase n=1 Tax=Blastomyces percursus TaxID=1658174 RepID=A0A1J9Q618_9EURO)

HSP 1 Score: 59.7 bits (143), Expect = 4.280e-9
Identity = 22/41 (53.66%), Postives = 29/41 (70.73%), Query Frame = 1 
Query:    1 LPQSKWMRDEDARFCCHCNTVFSVLNRRHHCRACGKVFDAR 123
            L +  WMRDE+A+ C HC   FS   R+HHCR CG++FDA+
Sbjct:  495 LSKEFWMRDENAKDCFHCGEPFSTFRRKHHCRTCGQIFDAK 535
[Close]
BLAST of mRNA_M-pyrifera_M_contig99752.22927.1 vs. uniprot
Match: A0A2B7WUI4_9EURO (1-phosphatidylinositol-3-phosphate 5-kinase n=1 Tax=Helicocarpus griseus UAMH5409 TaxID=1447875 RepID=A0A2B7WUI4_9EURO)

HSP 1 Score: 59.7 bits (143), Expect = 4.280e-9
Identity = 22/41 (53.66%), Postives = 29/41 (70.73%), Query Frame = 1 
Query:    1 LPQSKWMRDEDARFCCHCNTVFSVLNRRHHCRACGKVFDAR 123
            L +  WMRDE+A+ C HC   FS   R+HHCR CG++FDA+
Sbjct:  495 LSREFWMRDENAKDCFHCGEPFSTFRRKHHCRTCGQIFDAK 535
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BLAST of mRNA_M-pyrifera_M_contig99752.22927.1 vs. uniprot
Match: A0A1J9PQF4_9EURO (1-phosphatidylinositol-3-phosphate 5-kinase n=4 Tax=Ajellomycetaceae TaxID=299071 RepID=A0A1J9PQF4_9EURO)

HSP 1 Score: 59.7 bits (143), Expect = 4.280e-9
Identity = 22/41 (53.66%), Postives = 29/41 (70.73%), Query Frame = 1 
Query:    1 LPQSKWMRDEDARFCCHCNTVFSVLNRRHHCRACGKVFDAR 123
            L +  WMRDE+A+ C HC   FS   R+HHCR CG++FDA+
Sbjct:  497 LSREFWMRDENAKDCFHCGEPFSTFRRKHHCRTCGQIFDAK 537
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BLAST of mRNA_M-pyrifera_M_contig99752.22927.1 vs. uniprot
Match: C6H8M1_AJECH (FYVE-type domain-containing protein n=1 Tax=Ajellomyces capsulatus (strain H143) TaxID=544712 RepID=C6H8M1_AJECH)

HSP 1 Score: 59.3 bits (142), Expect = 5.210e-9
Identity = 22/41 (53.66%), Postives = 29/41 (70.73%), Query Frame = 1 
Query:    1 LPQSKWMRDEDARFCCHCNTVFSVLNRRHHCRACGKVFDAR 123
            L +  WMRDE+A+ C HC   FS   R+HHCR CG++FDA+
Sbjct:   90 LGKEFWMRDENAKDCFHCGEPFSTFRRKHHCRTCGQIFDAK 130
[Close]
BLAST of mRNA_M-pyrifera_M_contig99752.22927.1 vs. uniprot
Match: F0U9S5_AJEC8 (1-phosphatidylinositol-3-phosphate 5-kinase n=3 Tax=Histoplasma TaxID=5036 RepID=F0U9S5_AJEC8)

HSP 1 Score: 59.3 bits (142), Expect = 5.850e-9
Identity = 22/41 (53.66%), Postives = 29/41 (70.73%), Query Frame = 1 
Query:    1 LPQSKWMRDEDARFCCHCNTVFSVLNRRHHCRACGKVFDAR 123
            L +  WMRDE+A+ C HC   FS   R+HHCR CG++FDA+
Sbjct:  493 LGKEFWMRDENAKDCFHCGEPFSTFRRKHHCRTCGQIFDAK 533
[Close]
BLAST of mRNA_M-pyrifera_M_contig99752.22927.1 vs. uniprot
Match: C0NYL2_AJECG (1-phosphatidylinositol-3-phosphate 5-kinase n=2 Tax=Ajellomyces capsulatus TaxID=5037 RepID=C0NYL2_AJECG)

HSP 1 Score: 59.3 bits (142), Expect = 5.850e-9
Identity = 22/41 (53.66%), Postives = 29/41 (70.73%), Query Frame = 1 
Query:    1 LPQSKWMRDEDARFCCHCNTVFSVLNRRHHCRACGKVFDAR 123
            L +  WMRDE+A+ C HC   FS   R+HHCR CG++FDA+
Sbjct:  493 LGKEFWMRDENAKDCFHCGEPFSTFRRKHHCRTCGQIFDAK 533
[Close]
BLAST of mRNA_M-pyrifera_M_contig99752.22927.1 vs. uniprot
Match: C1H6I8_PARBA (1-phosphatidylinositol-3-phosphate 5-kinase n=5 Tax=Paracoccidioides TaxID=38946 RepID=C1H6I8_PARBA)

HSP 1 Score: 59.3 bits (142), Expect = 5.850e-9
Identity = 22/41 (53.66%), Postives = 29/41 (70.73%), Query Frame = 1 
Query:    1 LPQSKWMRDEDARFCCHCNTVFSVLNRRHHCRACGKVFDAR 123
            L +  WMRDE+A+ C HC   FS   R+HHCR CG++FDA+
Sbjct:  494 LGKEFWMRDENAKDCFHCGEPFSTFRRKHHCRTCGQIFDAK 534
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99752.22927.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A6Z4L1_9PEZI1.220e-953.661-phosphatidylinositol-3-phosphate 5-kinase n=2 Ta... [more]
A0A6A5YC98_9PEZI4.280e-953.661-phosphatidylinositol-3-phosphate 5-kinase n=1 Ta... [more]
T5C1F6_AJEDE4.280e-953.661-phosphatidylinositol-3-phosphate 5-kinase n=6 Ta... [more]
A0A1J9Q618_9EURO4.280e-953.661-phosphatidylinositol-3-phosphate 5-kinase n=1 Ta... [more]
A0A2B7WUI4_9EURO4.280e-953.661-phosphatidylinositol-3-phosphate 5-kinase n=1 Ta... [more]
A0A1J9PQF4_9EURO4.280e-953.661-phosphatidylinositol-3-phosphate 5-kinase n=4 Ta... [more]
C6H8M1_AJECH5.210e-953.66FYVE-type domain-containing protein n=1 Tax=Ajello... [more]
F0U9S5_AJEC85.850e-953.661-phosphatidylinositol-3-phosphate 5-kinase n=3 Ta... [more]
C0NYL2_AJECG5.850e-953.661-phosphatidylinositol-3-phosphate 5-kinase n=2 Ta... [more]
C1H6I8_PARBA5.850e-953.661-phosphatidylinositol-3-phosphate 5-kinase n=5 Ta... [more]

Pages

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99752contigM-pyrifera_M_contig99752:456..608 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Model size153
Cds size135
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816914.3680587-UTR-M-pyrifera_M_contig99752:455..4731622816914.3680587-UTR-M-pyrifera_M_contig99752:455..473Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig99752 456..473 +
1692278252.6357965-UTR-M-pyrifera_M_contig99752:455..4731692278252.6357965-UTR-M-pyrifera_M_contig99752:455..473Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig99752 456..473 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816914.3789766-CDS-M-pyrifera_M_contig99752:473..6081622816914.3789766-CDS-M-pyrifera_M_contig99752:473..608Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99752 474..608 +
1692278252.6519852-CDS-M-pyrifera_M_contig99752:473..6081692278252.6519852-CDS-M-pyrifera_M_contig99752:473..608Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99752 474..608 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99752.22927.1prot_M-pyrifera_M_contig99752.22927.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig99752 474..608 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig99752.22927.1

>prot_M-pyrifera_M_contig99752.22927.1 ID=prot_M-pyrifera_M_contig99752.22927.1|Name=mRNA_M-pyrifera_M_contig99752.22927.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=45bp
MRDEDARFCCHCNTVFSVLNRRHHCRACGKVFDARVRVPSTAAR*
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mRNA from alignment at M-pyrifera_M_contig99752:456..608+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig99752.22927.1 ID=mRNA_M-pyrifera_M_contig99752.22927.1|Name=mRNA_M-pyrifera_M_contig99752.22927.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=153bp|location=Sequence derived from alignment at M-pyrifera_M_contig99752:456..608+ (Macrocystis pyrifera P11B4 male)
CTCCCGCAGTCGAAGTGGATGCGCGACGAAGATGCCCGCTTCTGCTGCCA
CTGCAACACCGTCTTCTCGGTGCTGAACCGCCGGCACCACTGTAGGGCCT
GTGGAAAGGTCTTTGACGCGAGGGTGAGGGTGCCCTCCACTGCAGCGCGT
TAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig99752:456..608+

>mRNA_M-pyrifera_M_contig99752.22927.1 ID=mRNA_M-pyrifera_M_contig99752.22927.1|Name=mRNA_M-pyrifera_M_contig99752.22927.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=270bp|location=Sequence derived from alignment at M-pyrifera_M_contig99752:456..608+ (Macrocystis pyrifera P11B4 male)
ATGCGCGACGAAGATGCCCGCTTCTGCTGCCACTGCAACACCGTCTTCTC
GGTGCTGAACCGCCGGCACCACTGTAGGGCCTGTGGAAAGGTCTTTGACG
CGAGGGTGAGGGTGCCCTCCACTGCAGCGCGTTAGATGCGCGACGAAGAT
GCCCGCTTCTGCTGCCACTGCAACACCGTCTTCTCGGTGCTGAACCGCCG
GCACCACTGTAGGGCCTGTGGAAAGGTCTTTGACGCGAGGGTGAGGGTGC
CCTCCACTGCAGCGCGTTAG
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