mRNA_M-pyrifera_M_contig99694.22914.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig99694.22914.1 vs. uniprot
Match: A0A5A8DVP6_CAFRO (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DVP6_CAFRO) HSP 1 Score: 155 bits (392), Expect = 1.830e-43 Identity = 76/160 (47.50%), Postives = 108/160 (67.50%), Query Frame = 1 Query: 4 DLESMEDGSFGKAWAVYLETHGFDPDARSQVHHIEDEELAWVLQRYREVHDLWHVLTDLPPSIEGELALKWLEMTATGLPMPALASFVGPLRLLNSPRRLSFFLTHLVPWAASTGSSCVDLLAVPYETILPLPIQEVRQNLGLSIAPRPPWDLKHVDTVG 483 +L S+ + S G+A+ ++ +HGFD D+R++V ++ D+ELA+VLQRYRE HD H LT LPP++ GEL LKWLEM TGLPM A+A+ VGPLRL + R + HLVPWAA G + L+A +E +L P+ +VR + G++ AP L+H +VG Sbjct: 127 NLASLPEASLGRAYGDFMASHGFDADSRAEVRYVTDDELAYVLQRYREAHDFLHPLTGLPPTVLGELGLKWLEMIQTGLPMTAMAALVGPLRLDAAERAV--LTRHLVPWAAEQGRAARFLMAARFEAMLAWPLHQVRMDFGIAPAPDVDALLRHYRSVG 284
BLAST of mRNA_M-pyrifera_M_contig99694.22914.1 vs. uniprot
Match: A0A507EGW1_9FUNG (Ubiquinone biosynthesis protein COQ4, mitochondrial n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507EGW1_9FUNG) HSP 1 Score: 146 bits (369), Expect = 1.230e-40 Identity = 71/146 (48.63%), Postives = 97/146 (66.44%), Query Frame = 1 Query: 7 LESMEDGSFGKAWAVYLETHGFDPDARSQVHHIEDEELAWVLQRYREVHDLWHVLTDLPPSIEGELALKWLEMTATGLPMPALASFVGPLRLLNSPRRLSFFLTHLVPWAASTGSSCVDLLAVPYETILPLPIQEVRQNLGLSIAP 444 L +++DG+FG+ + +L+ G PD R V +I D+ELA+V+QRYREVHD WH LT LP +IE EL LKWLE+ +GLP+ AL++FVGPL+L + R+ F + VPWA GSSC LL + YE P+ E+R+ LG P Sbjct: 125 LRALDDGTFGREYVRFLDLEGVSPDTRVPVKYIGDDELAYVMQRYREVHDFWHTLTGLPTTIEAELGLKWLELVQSGLPVAALSAFVGPLQLTSEQRQRLF--SDYVPWAVQCGSSCRFLLNIYYEEQFHKPLPELRKELGFIPLP 268
BLAST of mRNA_M-pyrifera_M_contig99694.22914.1 vs. uniprot
Match: A0A7S4VIX8_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VIX8_9STRA) HSP 1 Score: 145 bits (367), Expect = 6.280e-40 Identity = 71/151 (47.02%), Postives = 102/151 (67.55%), Query Frame = 1 Query: 4 DLESMEDGSFGKAWAVYLETHGFDPDARSQVHHIEDEELAWVLQRYREVHDLWHVLTDLPPSIEGELALKWLEMTATGLPMPALASFVGPLRLLNSPRRLSFFLTHLVPWAASTGS--SCVDLLAVPYETILPLPIQEVRQNLGLSIAPRP 450 +LE ME+G+FG+A+A +++ HGF P+ R V +EDEELA+V+ RYR+ HD WH LT LPP++ GE+ALKWLE+ T LP+ AL++ VG LRL + + F T +PWA G+ S V L+ V YE ++E+R+ LG+ +AP P Sbjct: 158 NLEGMEEGTFGRAYADFMKCHGFHPEDRDAVRFVEDEELAYVMLRYRQCHDFWHTLTGLPPTVPGEIALKWLELFQTNLPVAALSATVGTLRLSDDEKHDLF--TLYIPWAIRVGTQTSKVHLMNVYYEREFECNLEELRERLGIEVAPTP 306
BLAST of mRNA_M-pyrifera_M_contig99694.22914.1 vs. uniprot
Match: A0A7S3ARK5_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ARK5_9EUKA) HSP 1 Score: 140 bits (353), Expect = 1.250e-39 Identity = 71/146 (48.63%), Postives = 95/146 (65.07%), Query Frame = 1 Query: 7 LESMEDGSFGKAWAVYLETHGFDPDARSQVHHIEDEELAWVLQRYREVHDLWHVLTDLPPSIEGELALKWLEMTATGLPMPALASFVGPLRLLNSPRRLSFFLTHLVPWAASTGSSCVDLLAVPYETILPLPIQEVRQNLGLSIAP 444 L +M S G A+A +L+ H FDPD RS V ++D +LA+V+ RYR+VHDLWHVL LPPS+ GE+ALKWLE TGLPM LA+ G LRL R + H++PW A +S VDL++V YE + P+ +RQ LG+ + P Sbjct: 6 LRAMPSDSLGAAYAGFLQAHSFDPDERSVVQFVDDPDLAYVMTRYRQVHDLWHVLYALPPSLLGEVALKWLEAVQTGLPMCGLAAVGGGLRLKLKQRTI--VRQHILPWVARQLTSRVDLMSVYYEREMEKPLSLLRQELGVELVP 149
BLAST of mRNA_M-pyrifera_M_contig99694.22914.1 vs. uniprot
Match: A0A7S0Q4G6_9EUKA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q4G6_9EUKA) HSP 1 Score: 142 bits (359), Expect = 1.630e-39 Identity = 72/146 (49.32%), Postives = 95/146 (65.07%), Query Frame = 1 Query: 7 LESMEDGSFGKAWAVYLETHGFDPDARSQVHHIEDEELAWVLQRYREVHDLWHVLTDLPPSIEGELALKWLEMTATGLPMPALASFVGPLRLLNSPRRLSFFLTHLVPWAASTGSSCVDLLAVPYETILPLPIQEVRQNLGLSIAP 444 L SM GS G +A +LE H FDPD RS V ++D +LA+V+ RYR+VHDLWHVL LPP+ GE+ALKWLE TGLPM ++ +F +RL R SF + H++PWA +S VDLL+V YE L + E+R L L ++P Sbjct: 91 LRSMPHGSLGAEYARFLERHQFDPDERSDVRFVDDADLAYVMLRYRQVHDLWHVLFALPPTFMGEVALKWLEAAQTGLPMCSVGAFAAGVRLRGHQR--SFMVRHVLPWAMRHAASGVDLLSVYYERELERDLDELRAELELELSP 234
BLAST of mRNA_M-pyrifera_M_contig99694.22914.1 vs. uniprot
Match: A0A0L0HLI9_SPIPD (Ubiquinone biosynthesis protein COQ4, mitochondrial n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HLI9_SPIPD) HSP 1 Score: 142 bits (359), Expect = 6.070e-39 Identity = 69/146 (47.26%), Postives = 93/146 (63.70%), Query Frame = 1 Query: 7 LESMEDGSFGKAWAVYLETHGFDPDARSQVHHIEDEELAWVLQRYREVHDLWHVLTDLPPSIEGELALKWLEMTATGLPMPALASFVGPLRLLNSPRRLSFFLTHLVPWAASTGSSCVDLLAVPYETILPLPIQEVRQNLGLSIAP 444 L + DG+FG+ + +L+T PD R V I + ELA+V+QRYREVHD WH LT LP +IE E+ LKWLE +G P+ L++FVGPLRL ++ R + F +H VPWA GSSC LL + YE + P+ E+R+ LG P Sbjct: 123 LRGLPDGTFGREYVRFLDTEHVSPDTRVPVKFIGNTELAYVMQRYREVHDFWHTLTGLPTTIEAEIGLKWLEFVQSGFPVAMLSAFVGPLRLTSTEREVLF--SHYVPWAVQCGSSCQFLLNIYYEEHMHRPLDELRKELGFIPLP 266
BLAST of mRNA_M-pyrifera_M_contig99694.22914.1 vs. uniprot
Match: A0A8J2X5E2_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X5E2_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.230e-38 Identity = 70/148 (47.30%), Postives = 98/148 (66.22%), Query Frame = 1 Query: 4 DLESMEDGSFGKAWAVYLETHGFDPDARSQVHHIEDEELAWVLQRYREVHDLWHVLTDLPPSIEGELALKWLEMTATGLPMPALASFVGPLRLLNSPRRLSFFLTHLVPWAASTGSSCVD-LLAVPYETILPLPIQEVRQNLGLSIAP 444 +L +++ +FG A+ +LE +GFDPD R+ V ++DEELA+VL RYR+VHD WHVL LPP++ GEL LKW E+ TGLP+ A ++ GPLRL + RR + H VPWA G +C LLAV YE + +R+ LG+++AP Sbjct: 104 ELRQLDENTFGHAYGRFLERYGFDPDDRTPVALVDDEELAYVLLRYRQVHDFWHVLFGLPPTVHGELVLKWFELVHTGLPVAAFSALFGPLRLSSKQRR-RLYDAH-VPWATRQGRACTQSLLAVYYEKCFDEDMDLLRKRLGVTVAP 249
BLAST of mRNA_M-pyrifera_M_contig99694.22914.1 vs. uniprot
Match: A0A1S8W0A5_9FUNG (Ubiquinone biosynthesis protein COQ4, mitochondrial n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W0A5_9FUNG) HSP 1 Score: 138 bits (347), Expect = 4.720e-38 Identity = 66/151 (43.71%), Postives = 97/151 (64.24%), Query Frame = 1 Query: 1 LDLESMED---GSFGKAWAVYLETHGFDPDARSQVHHIEDEELAWVLQRYREVHDLWHVLTDLPPSIEGELALKWLEMTATGLPMPALASFVGPLRLLNSPRRLSFFLTHLVPWAASTGSSCVDLLAVPYETILPLPIQEVRQNLGLSIAP 444 LDLE + + +FG+++ +L+ H PD+R +V +IEDEELA+V+ RYR+VHD WH L D+P ++EGE+ALKW E+ TGLP+ L++FVGPLRL + F VPWA +G++ L++V YE + L V + LG+ P Sbjct: 42 LDLERLRNLPANTFGRSYIAFLDKHNVTPDSRDEVKYIEDEELAYVMLRYRQVHDFWHTLLDMPITVEGEIALKWFELVQTGLPVTFLSAFVGPLRLTQEEKSRLF--GEYVPWAVQSGANAKHLMSVMYEDMFELEHDHVLKKLGIERMP 190
BLAST of mRNA_M-pyrifera_M_contig99694.22914.1 vs. uniprot
Match: A0A433PBC4_9FUNG (Ubiquinone biosynthesis protein COQ4, mitochondrial n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PBC4_9FUNG) HSP 1 Score: 137 bits (344), Expect = 9.550e-38 Identity = 66/146 (45.21%), Postives = 91/146 (62.33%), Query Frame = 1 Query: 7 LESMEDGSFGKAWAVYLETHGFDPDARSQVHHIEDEELAWVLQRYREVHDLWHVLTDLPPSIEGELALKWLEMTATGLPMPALASFVGPLRLLNSPRRLSFFLTHLVPWAASTGSSCVDLLAVPYETILPLPIQEVRQNLGLSIAP 444 L + DGS G+ + +L+ G PD R QV +++ EELA+V+QRYRE HD H L L ++E ELALKW E T TGLPM AL+S GPLRL ++ RR F +H VPWA + + V +E + P+ EVR++LG+ + P Sbjct: 47 LRELPDGSLGREYMRWLDAEGVSPDTRDQVRYVDSEELAYVMQRYRETHDFAHTLLGLDVTVESELALKWFEWTQTGLPMAALSSLFGPLRLTSAERRRLF--SHYVPWAVECAAGSKFFMCVYFEELFERPLTEVRRDLGIYLPP 190
BLAST of mRNA_M-pyrifera_M_contig99694.22914.1 vs. uniprot
Match: G4ZDZ9_PHYSP (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=6 Tax=Phytophthora TaxID=4783 RepID=G4ZDZ9_PHYSP) HSP 1 Score: 139 bits (351), Expect = 9.760e-38 Identity = 68/154 (44.16%), Postives = 99/154 (64.29%), Query Frame = 1 Query: 7 LESMEDGSFGKAWAVYLETHGFDPDARSQVHHIEDEELAWVLQRYREVHDLWHVLTDLPPSIEGELALKWLEMTATGLPMPALASFVGPLRLLNSPRRLSFFLTHLVPWAASTGSSCVDLLAVPYETILPLPIQEVRQNLGLSIAPRPPWDLKH 468 L ++ SFG+ +A ++++HGFD D RS V ++D ELA+V+QR+RE HD WH L D+PP++ GE+ALK++EM + LP+ AL++FVGPLRL + R L + VPWA+ L V YE PIQE+R+ L + +AP P +H Sbjct: 130 LRALPADSFGRHYATFMDSHGFDADGRSLVRFVDDPELAYVMQRHRESHDFWHTLFDVPPTVLGEIALKYVEMAHSQLPVSALSAFVGPLRLSSEERCL--LMKVYVPWASRASKKAHSLHCVMYEEEFETPIQELRRRLNIEVAPPLPDSSEH 281 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99694.22914.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig99694.22914.1 >prot_M-pyrifera_M_contig99694.22914.1 ID=prot_M-pyrifera_M_contig99694.22914.1|Name=mRNA_M-pyrifera_M_contig99694.22914.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=158bp MEDGSFGKAWAVYLETHGFDPDARSQVHHIEDEELAWVLQRYREVHDLWHback to top mRNA from alignment at M-pyrifera_M_contig99694:3..491+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig99694.22914.1 ID=mRNA_M-pyrifera_M_contig99694.22914.1|Name=mRNA_M-pyrifera_M_contig99694.22914.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=489bp|location=Sequence derived from alignment at M-pyrifera_M_contig99694:3..491+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig99694:3..491+ >mRNA_M-pyrifera_M_contig99694.22914.1 ID=mRNA_M-pyrifera_M_contig99694.22914.1|Name=mRNA_M-pyrifera_M_contig99694.22914.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=948bp|location=Sequence derived from alignment at M-pyrifera_M_contig99694:3..491+ (Macrocystis pyrifera P11B4 male)back to top |