mRNA_M-pyrifera_M_contig99676.22910.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig99676.22910.1
Unique NamemRNA_M-pyrifera_M_contig99676.22910.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig99676.22910.1 vs. uniprot
Match: A0A2E7K975_9PLAN (Protein kinase domain-containing protein n=5 Tax=Gimesia TaxID=1649453 RepID=A0A2E7K975_9PLAN)

HSP 1 Score: 428 bits (1100), Expect = 5.340e-138
Identity = 226/228 (99.12%), Postives = 227/228 (99.56%), Query Frame = 1 
Query:    1 TADTESGEDFLLEELRNACAEQEEQAETIQRQLHQVNARLAQVRTERDVLLARLNSADTRRGGSRPLRRRRVAVLLTLVAGCLLLIYLVRNADVNTPVSGRSEPAGKLSLASQTGSRFQRWPVGSGPEIVIPLQARVRAMDIAVSRYIDQSAYTIVAALENDIVLKYYYRKGLQNVTQSRFEGTPAGITVVTLSPQATLTAVAAGDHSIRVFETKKSGKDEYRRLEGH 684
            TADTESGEDFLLEELRNACAEQEEQAETIQRQLHQVNARLAQVRTERDVLLARLNSADTRRGGSRPLRRRRVAVLLTLVAGCLLLIYLVRNADVNTPVSGRSEPAGKLSLASQTGSRFQRWPVGSGPEIVIPLQARVRAMDIAVSRYIDQSAYTIVAALENDIVLKYYYRKGLQNVTQSRFEGTPAGITVVTLSPQATLTAVAAGDHSIRVFET KSGK+EYRRLEGH
Sbjct:  619 TADTESGEDFLLEELRNACAEQEEQAETIQRQLHQVNARLAQVRTERDVLLARLNSADTRRGGSRPLRRRRVAVLLTLVAGCLLLIYLVRNADVNTPVSGRSEPAGKLSLASQTGSRFQRWPVGSGPEIVIPLQARVRAMDIAVSRYIDQSAYTIVAALENDIVLKYYYRKGLQNVTQSRFEGTPAGITVVTLSPQATLTAVAAGDHSIRVFETNKSGKEEYRRLEGH 846
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BLAST of mRNA_M-pyrifera_M_contig99676.22910.1 vs. uniprot
Match: A0A3D3R2S8_9PLAN (Protein kinase domain-containing protein (Fragment) n=1 Tax=Gimesia maris TaxID=122 RepID=A0A3D3R2S8_9PLAN)

HSP 1 Score: 271 bits (692), Expect = 5.970e-81
Identity = 137/226 (60.62%), Postives = 178/226 (78.76%), Query Frame = 1 
Query:    7 DTESGEDFLLEELRNACAEQEEQAETIQRQLHQVNARLAQVRTERDVLLARLNSADTRRGGSRPLRRRRVAVLLTLVAGCLLLIYLVRNADVNTPVSGRSEPAGKLSLASQTGSRFQRWPVGSGPEIVIPLQARVRAMDIAVSRYIDQSAYTIVAALENDIVLKYYYRKGLQNVTQSRFEGTPAGITVVTLSPQATLTAVAAGDHSIRVFETKKSGKDEYRRLEGH 684
            D+E+ +DFLL+ELR AC EQE+QA+TIQRQLHQVNARLAQVRTERDVLLARL SA+TR+ G    R R V  +L LV  C++L++++++    T  SG+ +PA K   A++ G++   WP+ S  E++IPLQA+VRAMDIAV+RYID+SAYT++AAL+N+ ++KYY+R GL  V QS F G PAG+  + LSPQATLTAVAAGD+SIR+FET K G +EYRRLEGH
Sbjct:  630 DSEAEDDFLLQELRAACTEQEQQADTIQRQLHQVNARLAQVRTERDVLLARLRSAETRKRGGNASRSRTVVTILILVVSCMILLFVLKSIQFRTVQSGQGQPALKTIAATRAGAQSHHWPIESPREVIIPLQAKVRAMDIAVTRYIDKSAYTVIAALDNNTLIKYYFRSGLNYVVQSGFLGVPAGVKAIALSPQATLTAVAAGDNSIRLFETNKRGMEEYRRLEGH 855
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BLAST of mRNA_M-pyrifera_M_contig99676.22910.1 vs. uniprot
Match: A6CCW0_9PLAN (Serine/threonine protein kinase n=2 Tax=Gimesia maris TaxID=122 RepID=A6CCW0_9PLAN)

HSP 1 Score: 265 bits (676), Expect = 5.420e-78
Identity = 134/226 (59.29%), Postives = 176/226 (77.88%), Query Frame = 1 
Query:    7 DTESGEDFLLEELRNACAEQEEQAETIQRQLHQVNARLAQVRTERDVLLARLNSADTRRGGSRPLRRRRVAVLLTLVAGCLLLIYLVRNADVNTPVSGRSEPAGKLSLASQTGSRFQRWPVGSGPEIVIPLQARVRAMDIAVSRYIDQSAYTIVAALENDIVLKYYYRKGLQNVTQSRFEGTPAGITVVTLSPQATLTAVAAGDHSIRVFETKKSGKDEYRRLEGH 684
            D+E+ +DFLL+ELR AC EQ +QA+TIQRQLHQVNARLAQVRTERDVLLARL SA+TR+ G    R R V  +L LV  C++L++++++    T  SG+ +PA K   A++ G++   WP+ S  E++IPLQA+VRAMDIAV+RYID+ AYT++AAL+N+ ++KYY+R GL  V Q+ F G PAG+  + LSPQATLTAVAAGD+SIR+FET K G +EYRRLEGH
Sbjct:  630 DSEAEDDFLLQELRAACTEQVQQADTIQRQLHQVNARLAQVRTERDVLLARLRSAETRKRGGNASRSRTVVTILILVVSCMILLFVLKSTQFRTVQSGQGQPALKTIAATKAGAQSHHWPIESPREVIIPLQAKVRAMDIAVTRYIDKPAYTVIAALDNNTLIKYYFRSGLNYVVQTGFLGGPAGVKAIALSPQATLTAVAAGDNSIRLFETNKRGMEEYRRLEGH 855
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99676.22910.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2E7K975_9PLAN5.340e-13899.12Protein kinase domain-containing protein n=5 Tax=G... [more]
A0A3D3R2S8_9PLAN5.970e-8160.62Protein kinase domain-containing protein (Fragment... [more]
A6CCW0_9PLAN5.420e-7859.29Serine/threonine protein kinase n=2 Tax=Gimesia ma... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99676contigM-pyrifera_M_contig99676:2..685 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score266.2
Seed ortholog evalue1.4e-68
Seed eggNOG ortholog344747.PM8797T_02224
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.Protein tyrosine kinase
EggNOG OGs2J27Y@203682,COG0515@1,COG0515@2
COG Functional cat.KLT
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size684
Cds size684
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816913.6097534-CDS-M-pyrifera_M_contig99676:1..6851622816913.6097534-CDS-M-pyrifera_M_contig99676:1..685Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99676 2..685 +
1692278252.2319257-CDS-M-pyrifera_M_contig99676:1..6851692278252.2319257-CDS-M-pyrifera_M_contig99676:1..685Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99676 2..685 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99676.22910.1prot_M-pyrifera_M_contig99676.22910.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig99676 2..685 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig99676.22910.1

>prot_M-pyrifera_M_contig99676.22910.1 ID=prot_M-pyrifera_M_contig99676.22910.1|Name=mRNA_M-pyrifera_M_contig99676.22910.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=228bp
TADTESGEDFLLEELRNACAEQEEQAETIQRQLHQVNARLAQVRTERDVL
LARLNSADTRRGGSRPLRRRRVAVLLTLVAGCLLLIYLVRNADVNTPVSG
RSEPAGKLSLASQTGSRFQRWPVGSGPEIVIPLQARVRAMDIAVSRYIDQ
SAYTIVAALENDIVLKYYYRKGLQNVTQSRFEGTPAGITVVTLSPQATLT
AVAAGDHSIRVFETKKSGKDEYRRLEGH
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mRNA from alignment at M-pyrifera_M_contig99676:2..685+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig99676.22910.1 ID=mRNA_M-pyrifera_M_contig99676.22910.1|Name=mRNA_M-pyrifera_M_contig99676.22910.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=684bp|location=Sequence derived from alignment at M-pyrifera_M_contig99676:2..685+ (Macrocystis pyrifera P11B4 male)
ACTGCCGACACAGAAAGCGGAGAAGATTTCCTGCTGGAAGAACTGCGTAA
CGCCTGCGCGGAGCAGGAGGAACAGGCAGAAACGATACAACGGCAGTTGC
ATCAGGTGAATGCACGACTGGCACAGGTGCGAACGGAACGCGATGTATTA
CTGGCGCGGTTGAACAGCGCGGATACCCGCAGGGGCGGGAGTCGTCCTCT
CCGCAGACGGAGGGTTGCGGTACTGCTGACGCTGGTGGCAGGTTGCCTGT
TGCTGATCTATCTCGTGAGAAATGCTGATGTCAACACTCCCGTCTCCGGG
AGATCGGAGCCTGCTGGCAAGCTTTCCCTGGCTTCGCAGACCGGCTCCCG
GTTTCAGCGCTGGCCAGTCGGTTCCGGCCCTGAGATTGTCATTCCGTTGC
AGGCCAGGGTGCGCGCGATGGATATTGCTGTTTCCCGGTACATCGATCAA
TCCGCTTACACGATAGTCGCTGCACTCGAGAACGATATTGTATTGAAATA
TTATTATCGGAAGGGACTGCAGAATGTCACACAGAGCAGGTTCGAAGGAA
CGCCGGCCGGGATCACGGTGGTGACCCTTTCCCCGCAGGCAACACTGACC
GCTGTTGCTGCCGGCGATCACTCGATACGCGTGTTTGAAACGAAGAAAAG
TGGAAAGGATGAATACCGCCGACTGGAAGGACAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig99676:2..685+

>mRNA_M-pyrifera_M_contig99676.22910.1 ID=mRNA_M-pyrifera_M_contig99676.22910.1|Name=mRNA_M-pyrifera_M_contig99676.22910.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1368bp|location=Sequence derived from alignment at M-pyrifera_M_contig99676:2..685+ (Macrocystis pyrifera P11B4 male)
ACTGCCGACACAGAAAGCGGAGAAGATTTCCTGCTGGAAGAACTGCGTAA
CGCCTGCGCGGAGCAGGAGGAACAGGCAGAAACGATACAACGGCAGTTGC
ATCAGGTGAATGCACGACTGGCACAGGTGCGAACGGAACGCGATGTATTA
CTGGCGCGGTTGAACAGCGCGGATACCCGCAGGGGCGGGAGTCGTCCTCT
CCGCAGACGGAGGGTTGCGGTACTGCTGACGCTGGTGGCAGGTTGCCTGT
TGCTGATCTATCTCGTGAGAAATGCTGATGTCAACACTCCCGTCTCCGGG
AGATCGGAGCCTGCTGGCAAGCTTTCCCTGGCTTCGCAGACCGGCTCCCG
GTTTCAGCGCTGGCCAGTCGGTTCCGGCCCTGAGATTGTCATTCCGTTGC
AGGCCAGGGTGCGCGCGATGGATATTGCTGTTTCCCGGTACATCGATCAA
TCCGCTTACACGATAGTCGCTGCACTCGAGAACGATATTGTATTGAAATA
TTATTATCGGAAGGGACTGCAGAATGTCACACAGAGCAGGTTCGAAGGAA
CGCCGGCCGGGATCACGGTGGTGACCCTTTCCCCGCAGGCAACACTGACC
GCTGTTGCTGCCGGCGATCACTCGATACGCGTGTTTGAAACGAAGAAAAG
TGGAAAGGATGAATACCGCCGACTGGAAGGACACACTGCCGACACAGAAA
GCGGAGAAGATTTCCTGCTGGAAGAACTGCGTAACGCCTGCGCGGAGCAG
GAGGAACAGGCAGAAACGATACAACGGCAGTTGCATCAGGTGAATGCACG
ACTGGCACAGGTGCGAACGGAACGCGATGTATTACTGGCGCGGTTGAACA
GCGCGGATACCCGCAGGGGCGGGAGTCGTCCTCTCCGCAGACGGAGGGTT
GCGGTACTGCTGACGCTGGTGGCAGGTTGCCTGTTGCTGATCTATCTCGT
GAGAAATGCTGATGTCAACACTCCCGTCTCCGGGAGATCGGAGCCTGCTG
GCAAGCTTTCCCTGGCTTCGCAGACCGGCTCCCGGTTTCAGCGCTGGCCA
GTCGGTTCCGGCCCTGAGATTGTCATTCCGTTGCAGGCCAGGGTGCGCGC
GATGGATATTGCTGTTTCCCGGTACATCGATCAATCCGCTTACACGATAG
TCGCTGCACTCGAGAACGATATTGTATTGAAATATTATTATCGGAAGGGA
CTGCAGAATGTCACACAGAGCAGGTTCGAAGGAACGCCGGCCGGGATCAC
GGTGGTGACCCTTTCCCCGCAGGCAACACTGACCGCTGTTGCTGCCGGCG
ATCACTCGATACGCGTGTTTGAAACGAAGAAAAGTGGAAAGGATGAATAC
CGCCGACTGGAAGGACAC
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