mRNA_M-pyrifera_M_contig99662.22906.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig99662.22906.1 vs. uniprot
Match: UPI00077A1F41 (DNA polymerase epsilon catalytic subunit A-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A1F41) HSP 1 Score: 147 bits (371), Expect = 7.850e-42 Identity = 81/151 (53.64%), Postives = 102/151 (67.55%), Query Frame = 1 Query: 4 KEDLDLKNHLSGLKRQYLKVSFRTIGDLLHVRSKIFPSIDKNKARRKVNDVYDRAMGGGPDMRASENMEAFNRR--DPLDFIEDIREYDVSFYIRVSIDLSIRVGYWYTCSFATGV-TKLTHREDLLHRAEPRVFAFDIETTKLPLKFPDA 447 KEDLDL NHL GLKR Y+K+SF T+ DL+ V+ I P++ KNK + K N Y+ MG DM E M A NRR D + + DIREYDV +++RV+IDL I VG+WY G+ +L R+DLL R +P V AFDIETTKLPLKFPD+ Sbjct: 51 KEDLDLNNHLVGLKRNYIKLSFHTVNDLMKVKRDIMPAVRKNKEQAKTNAAYNIVMGA--DMNEDE-MIAANRRNADQMSNVVDIREYDVPYHVRVAIDLKIFVGHWYNVKIHGGIHPELARRDDLLDRPDPVVLAFDIETTKLPLKFPDS 198
BLAST of mRNA_M-pyrifera_M_contig99662.22906.1 vs. uniprot
Match: A0A0S7M9P1_9TELE (DNA polymerase epsilon catalytic subunit (Fragment) n=2 Tax=Percomorphaceae TaxID=1489872 RepID=A0A0S7M9P1_9TELE) HSP 1 Score: 147 bits (372), Expect = 3.290e-40 Identity = 78/155 (50.32%), Postives = 104/155 (67.10%), Query Frame = 1 Query: 4 KEDLDLKNHLSGLKRQYLKVSFRTIGDLLHVRSKIFPSIDKNKARRKVNDVY----DRAMGGGPDMRASENMEAFNRRDPLDFIEDIREYDVSFYIRVSIDLSIRVGYWYTCSF--ATGVTKLTHREDLLHRAEPRVFAFDIETTKLPLKFPDAE 450 KEDLDL NHL GLKR Y+K+SF T+ DL+ V+ +I P++ KN+ R + ND Y A+ GG + A E+ + D LD I D+REYDV +++RVSIDL I V +WY + +T ++ R+DL+ R +P V AFDIETTKLPLKFPDAE Sbjct: 136 KEDLDLPNHLVGLKRSYIKLSFNTVDDLVKVKREISPAVRKNREREQANDAYTSMLSSALSGGSVISADEDGTLKSIADQLDNIVDMREYDVPYHVRVSIDLKIHVAHWYNVRYRGSTFPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAE 290
BLAST of mRNA_M-pyrifera_M_contig99662.22906.1 vs. uniprot
Match: A0A4W4F0D4_ELEEL (DNA polymerase epsilon catalytic subunit n=1 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4F0D4_ELEEL) HSP 1 Score: 145 bits (366), Expect = 4.870e-40 Identity = 77/155 (49.68%), Postives = 101/155 (65.16%), Query Frame = 1 Query: 4 KEDLDLKNHLSGLKRQYLKVSFRTIGDLLHVRSKIFPSIDKNKARRKVNDVYDR----AMGGGPDMRASENMEAFNRRDPLDFIEDIREYDVSFYIRVSIDLSIRVGYWYTCSFATGV--TKLTHREDLLHRAEPRVFAFDIETTKLPLKFPDAE 450 KEDLDL NHL GLKR Y+K+ F T+ DL+ V+ +I P++ KN+ R K ND Y A+ GG M E+ + D LD I D+REYDV +++R+SIDL I V +WY + V ++ R+DL+ R +P V AFDIETTKLPLKFPDAE Sbjct: 135 KEDLDLPNHLVGLKRTYIKLCFNTVDDLVKVKREISPAVKKNREREKSNDTYTNMLSSALVGGSVMSPEEDGSSKRMADQLDNIVDMREYDVPYHVRLSIDLKIHVAHWYNVRYRGSVYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAE 289
BLAST of mRNA_M-pyrifera_M_contig99662.22906.1 vs. uniprot
Match: UPI000511B5F4 (DNA polymerase epsilon catalytic subunit A-like n=2 Tax=Neognathae TaxID=8825 RepID=UPI000511B5F4) HSP 1 Score: 145 bits (366), Expect = 1.250e-39 Identity = 79/157 (50.32%), Postives = 108/157 (68.79%), Query Frame = 1 Query: 4 KEDLDLKNHLSGLKRQYLKVSFRTIGDLLHVRSKIFPSIDKNKARRKVNDVY----DRAMGGGPDMRASENMEAFNRR--DPLDFIEDIREYDVSFYIRVSIDLSIRVGYWYTCSF--ATGVTKLTHREDLLHRAEPRVFAFDIETTKLPLKFPDAE 450 KEDLDL NHL GLKR Y+K+SF T+ DL+ VR +IFP++ KN+ R + +DVY A+ GG S + E +R+ + +D I D+REYDV +++R+SIDL I V +WY + +T ++T R+DL+ R +P V AFDIETTKLPLKFPDAE Sbjct: 73 KEDLDLPNHLVGLKRNYIKLSFNTVDDLVKVRKEIFPAVRKNRERDQASDVYTAMLSSALSGGS---LSTDEEGASRKVANQMDNIVDMREYDVPYHVRLSIDLKIHVAHWYNVRYRGSTYPPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAE 226
BLAST of mRNA_M-pyrifera_M_contig99662.22906.1 vs. uniprot
Match: A0A8C5B970_GADMO (DNA polymerase epsilon catalytic subunit n=1 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5B970_GADMO) HSP 1 Score: 143 bits (360), Expect = 4.850e-39 Identity = 77/155 (49.68%), Postives = 98/155 (63.23%), Query Frame = 1 Query: 4 KEDLDLKNHLSGLKRQYLKVSFRTIGDLLHVRSKIFPSIDKNKARRKVNDVY----DRAMGGGPDMRASENMEAFNRRDPLDFIEDIREYDVSFYIRVSIDLSIRVGYWYTCSFATGV--TKLTHREDLLHRAEPRVFAFDIETTKLPLKFPDAE 450 KEDLDL NHL GLKR Y+K+SF T+ DL VR +I P++ KN+ R + ND Y AM GG E+ D LD + D+REYDV +++RVSIDL I V +WY + ++ R+DL+ R +P V AFDIETTKLPLKFPDAE Sbjct: 122 KEDLDLPNHLVGLKRSYVKLSFSTVDDLTRVRREIAPAVRKNREREQSNDAYTTMLSSAMAGGSVTMEEEDGRYKKMSDQLDNVVDMREYDVPYHVRVSIDLKIHVAHWYNVRYRGTAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAE 276
BLAST of mRNA_M-pyrifera_M_contig99662.22906.1 vs. uniprot
Match: A0A3B5JX93_TAKRU (DNA polymerase epsilon catalytic subunit n=1 Tax=Takifugu rubripes TaxID=31033 RepID=A0A3B5JX93_TAKRU) HSP 1 Score: 143 bits (360), Expect = 5.200e-39 Identity = 75/155 (48.39%), Postives = 101/155 (65.16%), Query Frame = 1 Query: 4 KEDLDLKNHLSGLKRQYLKVSFRTIGDLLHVRSKIFPSIDKNKARRKVNDVY----DRAMGGGPDMRASENMEAFNRRDPLDFIEDIREYDVSFYIRVSIDLSIRVGYWYTCSFATGV--TKLTHREDLLHRAEPRVFAFDIETTKLPLKFPDAE 450 KEDLDL NHL GLKR Y+K+SF T+ DL+ V+ +I P++ KN+ R + ND Y A+ GG A + + D LD I D+REYDV +++R+SIDL I V +WY + + ++ R+DL+ R +P V AFDIETTKLPLKFPDAE Sbjct: 136 KEDLDLPNHLVGLKRSYIKLSFNTVDDLVKVKREISPAVRKNREREQSNDAYTSMLSSALSGGNVASADDERMLKSISDQLDNIVDMREYDVPYHVRLSIDLKIHVAHWYNVRYRSSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAE 290
BLAST of mRNA_M-pyrifera_M_contig99662.22906.1 vs. uniprot
Match: A0A673YMK9_SALTR (DNA polymerase epsilon catalytic subunit n=3 Tax=Salmoninae TaxID=504568 RepID=A0A673YMK9_SALTR) HSP 1 Score: 142 bits (359), Expect = 5.550e-39 Identity = 76/155 (49.03%), Postives = 100/155 (64.52%), Query Frame = 1 Query: 4 KEDLDLKNHLSGLKRQYLKVSFRTIGDLLHVRSKIFPSIDKNKARRKVNDVY----DRAMGGGPDMRASENMEAFNRRDPLDFIEDIREYDVSFYIRVSIDLSIRVGYWYTCSFATGV--TKLTHREDLLHRAEPRVFAFDIETTKLPLKFPDAE 450 KEDLDL NHL GLKR Y+K+SF T+ DL+ V+ +I P++ KN+ R K ND Y A+ GG A E+ + D +D I D+REYDV +++R+SIDL I V +WY + ++ R DL+ R +P V AFDIETTKLPLKFPDAE Sbjct: 121 KEDLDLPNHLVGLKRSYVKLSFNTVDDLMKVKREISPAVRKNREREKSNDTYTSMLSSALAGGSVSAADEDGMSKKTSDQMDNIVDMREYDVPYHVRLSIDLKIHVAHWYNVRYRGSAYPPEIILRSDLVERPDPVVLAFDIETTKLPLKFPDAE 275
BLAST of mRNA_M-pyrifera_M_contig99662.22906.1 vs. uniprot
Match: A0A2D0PMY7_ICTPU (DNA polymerase epsilon catalytic subunit n=3 Tax=Ictaluridae TaxID=7996 RepID=A0A2D0PMY7_ICTPU) HSP 1 Score: 149 bits (376), Expect = 7.980e-39 Identity = 79/155 (50.97%), Postives = 102/155 (65.81%), Query Frame = 1 Query: 4 KEDLDLKNHLSGLKRQYLKVSFRTIGDLLHVRSKIFPSIDKNKARRKVNDVY----DRAMGGGPDMRASENMEAFNRRDPLDFIEDIREYDVSFYIRVSIDLSIRVGYWYTCSFATGV--TKLTHREDLLHRAEPRVFAFDIETTKLPLKFPDAE 450 KEDLDL NHL GLKR Y+K+SF T+ DL+ V+ +I P++ KN+ R K ND Y A+ GG M A E+ + D LD I D+REYDV ++IR+SIDL I V +WY + ++ R+DL+ R +P V AFDIETTKLPLKFPDAE Sbjct: 136 KEDLDLHNHLVGLKRNYIKLSFNTVDDLIKVKREISPAVRKNREREKSNDAYTSMLSSALAGGSVMTADEDGTSKKMSDQLDNIVDMREYDVPYHIRLSIDLKIHVAHWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAE 290
BLAST of mRNA_M-pyrifera_M_contig99662.22906.1 vs. uniprot
Match: A0A3Q3AW75_KRYMA (DNA polymerase epsilon catalytic subunit n=1 Tax=Kryptolebias marmoratus TaxID=37003 RepID=A0A3Q3AW75_KRYMA) HSP 1 Score: 142 bits (358), Expect = 9.650e-39 Identity = 75/155 (48.39%), Postives = 102/155 (65.81%), Query Frame = 1 Query: 4 KEDLDLKNHLSGLKRQYLKVSFRTIGDLLHVRSKIFPSIDKNKARRKVNDVY----DRAMGGGPDMRASENMEAFNRRDPLDFIEDIREYDVSFYIRVSIDLSIRVGYWYTCSFATGV--TKLTHREDLLHRAEPRVFAFDIETTKLPLKFPDAE 450 KEDLDL NHL GLKR Y+K+SF T+ DL+ + +I P++ KN+ R + ND Y A+ G A E+ + + D LD I D+REYDV +++R+SIDL I V +WY+ + G ++ R+DL+ R +P V AFDIETTKLPLKFPDAE Sbjct: 126 KEDLDLPNHLVGLKRNYIKLSFNTVDDLVKAKREIAPAVRKNREREQSNDAYTSMLSSALAGASVTPADEDGMSKSIADQLDNIVDMREYDVPYHVRLSIDLKIHVAHWYSVRYRGGAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAE 280
BLAST of mRNA_M-pyrifera_M_contig99662.22906.1 vs. uniprot
Match: A0A1A8NWF0_9TELE (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Nothobranchius rachovii TaxID=451742 RepID=A0A1A8NWF0_9TELE) HSP 1 Score: 140 bits (354), Expect = 1.080e-38 Identity = 75/155 (48.39%), Postives = 103/155 (66.45%), Query Frame = 1 Query: 4 KEDLDLKNHLSGLKRQYLKVSFRTIGDLLHVRSKIFPSIDKNKARRKVNDVY----DRAMGGGPDMRASENMEAFNRRDPLDFIEDIREYDVSFYIRVSIDLSIRVGYWYTCSFATGV--TKLTHREDLLHRAEPRVFAFDIETTKLPLKFPDAE 450 KEDLDL NHL GLKR Y+K+SF T+ DL+ V+ +I P++ KN+ R + ND Y A+ GG A ++ + + D L+ I D+REYDV +++R+SIDL I V +WY + +++ REDL+ R +P V AFDIETTKLPLKFPDAE Sbjct: 95 KEDLDLPNHLVGLKRNYIKLSFNTVDDLIKVKREIAPAVRKNREREQSNDSYTSMLSSALSGGNVTSAYDDGMSKSIVDQLENIVDMREYDVPYHVRLSIDLKIHVAHWYNIRYRGSAFPSEIVRREDLVERPDPVVLAFDIETTKLPLKFPDAE 249 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99662.22906.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig99662.22906.1 >prot_M-pyrifera_M_contig99662.22906.1 ID=prot_M-pyrifera_M_contig99662.22906.1|Name=mRNA_M-pyrifera_M_contig99662.22906.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=150bp MKEDLDLKNHLSGLKRQYLKVSFRTIGDLLHVRSKIFPSIDKNKARRKVNback to top mRNA from alignment at M-pyrifera_M_contig99662:8..682+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig99662.22906.1 ID=mRNA_M-pyrifera_M_contig99662.22906.1|Name=mRNA_M-pyrifera_M_contig99662.22906.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=675bp|location=Sequence derived from alignment at M-pyrifera_M_contig99662:8..682+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig99662:8..682+ >mRNA_M-pyrifera_M_contig99662.22906.1 ID=mRNA_M-pyrifera_M_contig99662.22906.1|Name=mRNA_M-pyrifera_M_contig99662.22906.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=900bp|location=Sequence derived from alignment at M-pyrifera_M_contig99662:8..682+ (Macrocystis pyrifera P11B4 male)back to top |