mRNA_M-pyrifera_M_contig99607.22901.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig99607.22901.1
Unique NamemRNA_M-pyrifera_M_contig99607.22901.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig99607.22901.1 vs. uniprot
Match: A0A5A8D748_CAFRO (SET domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D748_CAFRO)

HSP 1 Score: 154 bits (389), Expect = 3.890e-43
Identity = 79/144 (54.86%), Postives = 100/144 (69.44%), Query Frame = 1 
Query:   52 LAAKFAAMKEEPLHHRVIVERSPIHGWGLFAKRPIRKHSLVIEYTGEIVGVTVADNREQLYERLRLGGSCYLFSLSKDRIVDATMRGTVARFINHSTSPNCDSHVVT-VGSDRHIVIIALRDISAGEELTYDYKSVLFEFARDE 480
            +++    +  EPL  RV   +S IHGWGLFAKR +RK  +VIEYTG ++   VAD REQ Y   +LGGSCYLF +  D I DAT+RG+ ARFINHS +PNCDS VV  V  ++ IVI ALRD+  GEE+TYDYK   F+FA+ +
Sbjct:  175 VSSLLQGLDREPLAERVRARKSDIHGWGLFAKRKLRKGEIVIEYTGHLISSGVADLREQEYAEKKLGGSCYLFRMDDDAIADATLRGSCARFINHSGAPNCDSRVVAGVDGNKAIVIQALRDVDPGEEVTYDYKFP-FDFAQSQ 317
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BLAST of mRNA_M-pyrifera_M_contig99607.22901.1 vs. uniprot
Match: A0A5A8CXY5_CAFRO (SET domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CXY5_CAFRO)

HSP 1 Score: 154 bits (389), Expect = 3.180e-42
Identity = 79/144 (54.86%), Postives = 100/144 (69.44%), Query Frame = 1 
Query:   52 LAAKFAAMKEEPLHHRVIVERSPIHGWGLFAKRPIRKHSLVIEYTGEIVGVTVADNREQLYERLRLGGSCYLFSLSKDRIVDATMRGTVARFINHSTSPNCDSHVVT-VGSDRHIVIIALRDISAGEELTYDYKSVLFEFARDE 480
            +++    +  EPL  RV   +S IHGWGLFAKR +RK  +VIEYTG ++   VAD REQ Y   +LGGSCYLF +  D I DAT+RG+ ARFINHS +PNCDS VV  V  ++ IVI ALRD+  GEE+TYDYK   F+FA+ +
Sbjct:  271 VSSLLQGLDREPLAERVRARKSDIHGWGLFAKRKLRKGEIVIEYTGHLISSGVADLREQEYAEKKLGGSCYLFRMDDDAIADATLRGSCARFINHSGAPNCDSRVVAGVDGNKAIVIQALRDVDPGEEVTYDYKFP-FDFAQSQ 413
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BLAST of mRNA_M-pyrifera_M_contig99607.22901.1 vs. uniprot
Match: A0A5A8E3C3_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E3C3_CAFRO)

HSP 1 Score: 154 bits (389), Expect = 9.460e-42
Identity = 79/144 (54.86%), Postives = 100/144 (69.44%), Query Frame = 1 
Query:   52 LAAKFAAMKEEPLHHRVIVERSPIHGWGLFAKRPIRKHSLVIEYTGEIVGVTVADNREQLYERLRLGGSCYLFSLSKDRIVDATMRGTVARFINHSTSPNCDSHVVT-VGSDRHIVIIALRDISAGEELTYDYKSVLFEFARDE 480
            +++    +  EPL  RV   +S IHGWGLFAKR +RK  +VIEYTG ++   VAD REQ Y   +LGGSCYLF +  D I DAT+RG+ ARFINHS +PNCDS VV  V  ++ IVI ALRD+  GEE+TYDYK   F+FA+ +
Sbjct:  332 VSSLLQGLDREPLAERVRARKSDIHGWGLFAKRKLRKGEIVIEYTGHLISSGVADLREQEYAEKKLGGSCYLFRMDDDAIADATLRGSCARFINHSGAPNCDSRVVAGVDGNKAIVIQALRDVDPGEEVTYDYKFP-FDFAQSQ 474
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BLAST of mRNA_M-pyrifera_M_contig99607.22901.1 vs. uniprot
Match: A0A7S0AEX1_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AEX1_9STRA)

HSP 1 Score: 139 bits (350), Expect = 4.780e-39
Identity = 70/134 (52.24%), Postives = 92/134 (68.66%), Query Frame = 1 
Query:   61 KFAAMKEEPLHHRVIVERSPIHGWGLFAKRPIRKHSLVIEYTGEIVGVTVADNREQLYERLRLGGSCYLFSLSKDRIVDATMRGTVARFINHSTSPNCDSHVVTV----GSDRHIVIIALRDISAGEELTYDYK 450
            K+  MK  PL  R++ +RS IHGWGLF K+ I+KH ++IEY GE++   VAD RE+ YE   +G SCY+F L  +RIVDATM G +ARF+NHS   N  + V+TV    G ++ IV+ A RDI A EE+TYDYK
Sbjct:   13 KYKEMKSVPLGDRLVAKRSHIHGWGLFTKKDIKKHQMIIEYMGELLRFRVADKREKAYEESGVG-SCYMFRLDLERIVDATMVGCMARFMNHSCQNNAYAKVITVNTEEGQEKKIVVFANRDIKADEEITYDYK 145
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BLAST of mRNA_M-pyrifera_M_contig99607.22901.1 vs. uniprot
Match: B7GAQ1_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GAQ1_PHATC)

HSP 1 Score: 133 bits (335), Expect = 6.050e-37
Identity = 67/133 (50.38%), Postives = 87/133 (65.41%), Query Frame = 1 
Query:   64 FAAMKEEPLHHRVIVERSPIHGWGLFAKRPIRKHSLVIEYTGEIVGVTVADNREQLYERLRLGGSCYLFSLSKDRIVDATMRGTVARFINHSTSPNCDSHVVTV----GSDRHIVIIALRDISAGEELTYDYK 450
            +  MK  P+  R++  RS IHGWGLF K  I+K   +IEY GE++   +AD RE+ YE +   GSCY+F L   RIVDAT  G +ARF+NH   PN  + +++V    G DR IV+ A RDISAGEE+TYDYK
Sbjct:    1 YRRMKAVPIEQRLVARRSHIHGWGLFTKSDIQKDDPIIEYMGEVIRQPIADQRERAYE-ISGEGSCYMFRLDMQRIVDATKIGCMARFMNHCCGPNAYAKIISVDAELGQDRKIVVFANRDISAGEEITYDYK 132
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BLAST of mRNA_M-pyrifera_M_contig99607.22901.1 vs. uniprot
Match: A0A7S0GGD2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GGD2_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.550e-36
Identity = 70/135 (51.85%), Postives = 93/135 (68.89%), Query Frame = 1 
Query:   58 AKFAAMKEEPLHHRVIVERSPIHGWGLFAKRPIRKHSLVIEYTGEIVGVTVADNREQLYERLRLGGSCYLFSLSKDRIVDATMRGTVARFINHSTSPNCDSHVVTV----GSDRHIVIIALRDISAGEELTYDYK 450
            AK+A MK  PL +R+  +RS IHGWGLF K  + +H+++IEY GE+V  ++AD RE+ YE   +G SCY+F L   RIVDATM G +ARF+NH  SPN  + ++TV    G ++ I I A RDI  GEE+TYDYK
Sbjct:  370 AKYAEMKSVPLENRLAAKRSHIHGWGLFTKVDLARHAMIIEYMGEVVSQSIADKRERAYEMSGIG-SCYMFRLDSQRIVDATMIGCMARFMNHCCSPNAYAKIITVETDKGLEKKIGIFANRDIGGGEEITYDYK 503
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BLAST of mRNA_M-pyrifera_M_contig99607.22901.1 vs. uniprot
Match: A0A162NGE1_PHYB8 (Uncharacterized protein (Fragment) n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162NGE1_PHYB8)

HSP 1 Score: 132 bits (331), Expect = 3.790e-36
Identity = 62/113 (54.87%), Postives = 81/113 (71.68%), Query Frame = 1 
Query:  112 RSPIHGWGLFAKRPIRKHSLVIEYTGEIVGVTVADNREQLYERLRLGGSCYLFSLSKDRIVDATMRGTVARFINHSTSPNCDSHVVTVGSDRHIVIIALRDISAGEELTYDYK 450
            +SPIH WGLFA+ PI  + +VIEY GE++   VA+ RE+ YER  +G S YLF +  DR++DAT RG VARFINH  +PNC + +VT+   + IVI + RDI  GEE+TYDYK
Sbjct:   26 KSPIHAWGLFAEEPIDANDIVIEYVGEVIRHQVAEKREKEYERTGIGSS-YLFRVDNDRVIDATKRGNVARFINHCCAPNCVAKIVTIDKQKRIVIYSSRDIVPGEEITYDYK 137
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BLAST of mRNA_M-pyrifera_M_contig99607.22901.1 vs. uniprot
Match: A0A7S2A0R2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A0R2_9STRA)

HSP 1 Score: 141 bits (355), Expect = 8.200e-36
Identity = 71/140 (50.71%), Postives = 94/140 (67.14%), Query Frame = 1 
Query:   43 LVGLAAKFAAMKEEPLHHRVIVERSPIHGWGLFAKRPIRKHSLVIEYTGEIVGVTVADNREQLYERLRLGGSCYLFSLSKDRIVDATMRGTVARFINHSTSPNCDSHVVTV----GSDRHIVIIALRDISAGEELTYDYK 450
            +V   AK+  M+  P+  R+  +RS IHGWGLF K  + KHS+++EY GE V   +AD RE+ YE+  +G SCY+F L   RIVDAT  G +ARF+NHS  PN  ++V+TV    G D+ IV+ A RDI AGEE+TYDYK
Sbjct: 1293 MVSNQAKYDEMRSVPMDQRLAAKRSHIHGWGLFTKLRLSKHSMIVEYMGETVRQCIADKRERAYEKSGIG-SCYMFRLDAQRIVDATTIGCMARFMNHSCQPNAYANVITVNTDQGLDKKIVVFANRDIQAGEEITYDYK 1431
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BLAST of mRNA_M-pyrifera_M_contig99607.22901.1 vs. uniprot
Match: A0A8H7PW91_MORIS (Histone-lysine N-methyltransferase, H3 lysine-4 specific n=2 Tax=Umbelopsis TaxID=64561 RepID=A0A8H7PW91_MORIS)

HSP 1 Score: 131 bits (329), Expect = 6.060e-35
Identity = 62/113 (54.87%), Postives = 81/113 (71.68%), Query Frame = 1 
Query:  112 RSPIHGWGLFAKRPIRKHSLVIEYTGEIVGVTVADNREQLYERLRLGGSCYLFSLSKDRIVDATMRGTVARFINHSTSPNCDSHVVTVGSDRHIVIIALRDISAGEELTYDYK 450
            +SPIH WGLFA+  I  + +VIEY GE++   VAD+RE+ YER  +G S YLF +  D ++DAT +G+VARFINH  SPNC + ++TV   + IVI A RDI  GEE+TYDYK
Sbjct:  114 KSPIHDWGLFAQERIDANDMVIEYVGEVIRQKVADHREKAYERCGIGSS-YLFRVDDDTVIDATKKGSVARFINHCCSPNCSAKIITVDKQKKIVIYANRDIELGEEITYDYK 225
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BLAST of mRNA_M-pyrifera_M_contig99607.22901.1 vs. uniprot
Match: A0A6B2L1I7_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L1I7_9EUKA)

HSP 1 Score: 135 bits (339), Expect = 2.190e-34
Identity = 66/118 (55.93%), Postives = 87/118 (73.73%), Query Frame = 1 
Query:   97 RVIVERSPIHGWGLFAKRPIRKHSLVIEYTGEIVGVTVADNREQLYERLRLGGSCYLFSLSKDRIVDATMRGTVARFINHSTSPNCDSHVVTVGSDRHIVIIALRDISAGEELTYDYK 450
            R+  +RS IH WGLFA   I K  +VIEY GE+V  +VAD+RE+ YE++ +G S YLF + +D I+DAT+RG +ARFINH   PNC + V+TVG+ + IVI + RDI AGEE+TYDYK
Sbjct:  357 RLSFQRSTIHDWGLFALEFIAKDEMVIEYIGEVVRQSVADDREKKYEKIGIGSS-YLFRIDEDTIIDATVRGNLARFINHCCDPNCYAKVITVGTQKKIVIYSQRDIHAGEEITYDYK 473
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99607.22901.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8D748_CAFRO3.890e-4354.86SET domain-containing protein n=1 Tax=Cafeteria ro... [more]
A0A5A8CXY5_CAFRO3.180e-4254.86SET domain-containing protein n=2 Tax=Cafeteria ro... [more]
A0A5A8E3C3_CAFRO9.460e-4254.86Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A7S0AEX1_9STRA4.780e-3952.24Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
B7GAQ1_PHATC6.050e-3750.38Predicted protein (Fragment) n=2 Tax=Phaeodactylum... [more]
A0A7S0GGD2_9STRA1.550e-3651.85Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A162NGE1_PHYB83.790e-3654.87Uncharacterized protein (Fragment) n=1 Tax=Phycomy... [more]
A0A7S2A0R2_9STRA8.200e-3650.71Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A8H7PW91_MORIS6.060e-3554.87Histone-lysine N-methyltransferase, H3 lysine-4 sp... [more]
A0A6B2L1I7_9EUKA2.190e-3455.93Uncharacterized protein n=1 Tax=Arcella intermedia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99607contigM-pyrifera_M_contig99607:21..506 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score134.4
Seed ortholog evalue4.7e-29
Seed eggNOG ortholog57918.XP_004306675.1
KEGG koko:K22155,ko:K22156
Hectar predicted targeting categoryother localisation
GOsGO:0008150,GO:0009893,GO:0010604,GO:0010638,GO:0019222,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0032268,GO:0032270,GO:0033043,GO:0033044,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051569,GO:0051571,GO:0060255,GO:0065007,GO:0080090,GO:1902275,GO:1905269,GO:2001252
EggNOG free text desc.Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX MLL subfamily
EggNOG OGs37JIW@33090,3GDVZ@35493,4JMFG@91835,COG2940@1,KOG1080@2759
EC2.3.2.27
COG Functional cat.BK
Best tax levelfabids
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036,ko04121
Exons1
Model size486
Cds size486
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816913.2428083-CDS-M-pyrifera_M_contig99607:20..5061622816913.2428083-CDS-M-pyrifera_M_contig99607:20..506Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99607 21..506 -
1692278252.0201077-CDS-M-pyrifera_M_contig99607:20..5061692278252.0201077-CDS-M-pyrifera_M_contig99607:20..506Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99607 21..506 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99607.22901.1prot_M-pyrifera_M_contig99607.22901.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig99607 21..506 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig99607.22901.1

>prot_M-pyrifera_M_contig99607.22901.1 ID=prot_M-pyrifera_M_contig99607.22901.1|Name=mRNA_M-pyrifera_M_contig99607.22901.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=162bp
VPVEEEGAGSQGTGLVGLAAKFAAMKEEPLHHRVIVERSPIHGWGLFAKR
PIRKHSLVIEYTGEIVGVTVADNREQLYERLRLGGSCYLFSLSKDRIVDA
TMRGTVARFINHSTSPNCDSHVVTVGSDRHIVIIALRDISAGEELTYDYK
SVLFEFARDEE*
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mRNA from alignment at M-pyrifera_M_contig99607:21..506-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig99607.22901.1 ID=mRNA_M-pyrifera_M_contig99607.22901.1|Name=mRNA_M-pyrifera_M_contig99607.22901.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=486bp|location=Sequence derived from alignment at M-pyrifera_M_contig99607:21..506- (Macrocystis pyrifera P11B4 male)
GTACCTGTGGAGGAAGAAGGAGCAGGGAGTCAAGGTACGGGATTGGTTGG
ATTGGCAGCCAAGTTTGCTGCCATGAAAGAAGAGCCACTGCATCACCGTG
TGATTGTAGAACGGTCTCCAATTCACGGATGGGGCCTTTTCGCCAAGCGC
CCAATTCGAAAGCATTCCCTTGTGATTGAATACACTGGTGAAATTGTTGG
AGTAACAGTGGCAGACAATCGAGAACAGTTGTACGAACGATTGCGGCTCG
GAGGATCATGTTATTTGTTCAGTTTGTCCAAAGATCGGATTGTTGATGCC
ACCATGCGTGGCACAGTAGCTCGCTTCATCAATCACAGCACATCTCCGAA
CTGTGACAGTCACGTCGTCACCGTCGGTTCCGATCGGCACATTGTAATCA
TCGCACTCCGCGATATTAGCGCCGGCGAAGAGCTTACATATGACTACAAG
AGCGTCTTGTTTGAATTCGCGCGAGACGAAGAGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig99607:21..506-

>mRNA_M-pyrifera_M_contig99607.22901.1 ID=mRNA_M-pyrifera_M_contig99607.22901.1|Name=mRNA_M-pyrifera_M_contig99607.22901.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=972bp|location=Sequence derived from alignment at M-pyrifera_M_contig99607:21..506- (Macrocystis pyrifera P11B4 male)
GTACCTGTGGAGGAAGAAGGAGCAGGGAGTCAAGGTACGGGATTGGTTGG
ATTGGCAGCCAAGTTTGCTGCCATGAAAGAAGAGCCACTGCATCACCGTG
TGATTGTAGAACGGTCTCCAATTCACGGATGGGGCCTTTTCGCCAAGCGC
CCAATTCGAAAGCATTCCCTTGTGATTGAATACACTGGTGAAATTGTTGG
AGTAACAGTGGCAGACAATCGAGAACAGTTGTACGAACGATTGCGGCTCG
GAGGATCATGTTATTTGTTCAGTTTGTCCAAAGATCGGATTGTTGATGCC
ACCATGCGTGGCACAGTAGCTCGCTTCATCAATCACAGCACATCTCCGAA
CTGTGACAGTCACGTCGTCACCGTCGGTTCCGATCGGCACATTGTAATCA
TCGCACTCCGCGATATTAGCGCCGGCGAAGAGCTTACATATGACTACAAG
AGCGTCTTGTTTGAATTCGCGCGAGACGAAGAGTGAGTACCTGTGGAGGA
AGAAGGAGCAGGGAGTCAAGGTACGGGATTGGTTGGATTGGCAGCCAAGT
TTGCTGCCATGAAAGAAGAGCCACTGCATCACCGTGTGATTGTAGAACGG
TCTCCAATTCACGGATGGGGCCTTTTCGCCAAGCGCCCAATTCGAAAGCA
TTCCCTTGTGATTGAATACACTGGTGAAATTGTTGGAGTAACAGTGGCAG
ACAATCGAGAACAGTTGTACGAACGATTGCGGCTCGGAGGATCATGTTAT
TTGTTCAGTTTGTCCAAAGATCGGATTGTTGATGCCACCATGCGTGGCAC
AGTAGCTCGCTTCATCAATCACAGCACATCTCCGAACTGTGACAGTCACG
TCGTCACCGTCGGTTCCGATCGGCACATTGTAATCATCGCACTCCGCGAT
ATTAGCGCCGGCGAAGAGCTTACATATGACTACAAGAGCGTCTTGTTTGA
ATTCGCGCGAGACGAAGAGTGA
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