mRNA_M-pyrifera_M_contig99567.22895.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig99567.22895.1 vs. uniprot
Match: A0A2P6N3C1_9EUKA (RING-type domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N3C1_9EUKA) HSP 1 Score: 64.7 bits (156), Expect = 3.600e-10 Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = 1 Query: 1 RECPSCRVKVPSHRYLRADPRFDDLVCKLLGGDVERFEDIQSEAVAEINKNF----NRDALQRSIEDGLKRQLLARKREEYALRKKRKLTVSPSSP 276 +ECP+CRVK S R LRADPRFD ++ + D++ FE Q +A EI KN ++ L +S+E+G KRQ LARK+ + KRK SP Sbjct: 81 KECPACRVKCISRRQLRADPRFDRIISAVYS-DLDSFEATQDQATEEIAKNAISIGSKSILLQSMEEGKKRQALARKQSQ-----KRKSFEDEESP 170
BLAST of mRNA_M-pyrifera_M_contig99567.22895.1 vs. uniprot
Match: UPI0003F0BC74 (E3 ubiquitin-protein ligase RING2-A-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0BC74) HSP 1 Score: 61.2 bits (147), Expect = 7.100e-9 Identity = 33/72 (45.83%), Postives = 47/72 (65.28%), Query Frame = 1 Query: 1 RECPSCRVKVPSHRYLRADPRFDDLVCKLLGGDVERFEDIQSEAVAEINKNFNRDALQRSIEDGLKRQLLAR 216 +ECP+CR K+ S R LR DP FD L+ K+ E +E Q + +A +N++ N+ ALQ SIE+GLK Q + R Sbjct: 86 KECPTCRKKLVSRRSLRPDPNFDALISKIYPSRDE-YEAQQEKLLARLNQHHNQQALQNSIEEGLKLQAMNR 156
BLAST of mRNA_M-pyrifera_M_contig99567.22895.1 vs. uniprot
Match: A0A7S2H2K0_9STRA (RING-type E3 ubiquitin transferase (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H2K0_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 7.120e-9 Identity = 30/75 (40.00%), Postives = 47/75 (62.67%), Query Frame = 1 Query: 1 RECPSCRVKVPSHRYLRADPRFDDLVCKLLGGDVERFEDIQSEAVAEINKNFN-RDALQRSIEDGLKRQLLARKR 222 +ECPSCR+ +PS R LR DP FDDL+ + G D++ ED + + + +NK N +A S + G+ +Q + RK+ Sbjct: 54 KECPSCRIHIPSRRSLRPDPNFDDLINNIYG-DIDALEDYEEKEIENLNKAKNMNNAYAESRKRGIMQQAIHRKK 127
BLAST of mRNA_M-pyrifera_M_contig99567.22895.1 vs. uniprot
Match: A0A7S1B451_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B451_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 2.140e-8 Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 1 Query: 1 RECPSCRVKVPSHRYLRADPRFDDLVCKLLGGDVERFEDIQSEAVAEINK 150 RECPSCRV +PS R LR D FD L+ K+ G D+++ E + EAVA +NK Sbjct: 337 RECPSCRVHIPSRRSLRRDDAFDSLMRKIYGNDLDKVEKHEEEAVAAVNK 386
BLAST of mRNA_M-pyrifera_M_contig99567.22895.1 vs. uniprot
Match: A0A7S4RPC5_9STRA (RING-type E3 ubiquitin transferase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RPC5_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 4.900e-8 Identity = 30/75 (40.00%), Postives = 47/75 (62.67%), Query Frame = 1 Query: 1 RECPSCRVKVPSHRYLRADPRFDDLVCKLLGGDVERFEDIQSEAVAEINKNFN-RDALQRSIEDGLKRQLLARKR 222 +ECPSCR+ +PS R LR DP FDDL+ + G D++ ED + + + +NK N +A S + G+ +Q + RK+ Sbjct: 144 KECPSCRIHIPSRRSLRPDPNFDDLINNIYG-DIDALEDYEEKEIENLNKAKNMNNAYAESRKRGIMQQAIHRKK 217
BLAST of mRNA_M-pyrifera_M_contig99567.22895.1 vs. uniprot
Match: A0A1P6BFJ5_BRUMA (RING-type E3 ubiquitin transferase n=13 Tax=Onchocercidae TaxID=6296 RepID=A0A1P6BFJ5_BRUMA) HSP 1 Score: 57.8 bits (138), Expect = 1.350e-7 Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 1 Query: 1 RECPSCRVKVPSHRYLRADPRFDDLVCKLLGGDVERFEDIQSEAVAEINKNFNRDALQRSIEDGLKRQLLARKRE-----EYALRKKRKLTVSPSSPLH 282 +ECP+CR K+ S R LR DP FD L+ K+ D + +E +Q +A+ ++ N +ALQ+SIE G+K Q R++ +Y RK+R P S +H Sbjct: 84 KECPTCRKKLVSKRSLRPDPNFDALINKIWP-DRQIYEQMQQKAMEMFHQQSNVEALQKSIEAGMKAQAANRRQRVQGSYDYEKRKRR-----PRSDVH 176
BLAST of mRNA_M-pyrifera_M_contig99567.22895.1 vs. uniprot
Match: A0A0N4TP75_BRUPA (RING-type E3 ubiquitin transferase n=1 Tax=Brugia pahangi TaxID=6280 RepID=A0A0N4TP75_BRUPA) HSP 1 Score: 57.8 bits (138), Expect = 1.420e-7 Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 1 Query: 1 RECPSCRVKVPSHRYLRADPRFDDLVCKLLGGDVERFEDIQSEAVAEINKNFNRDALQRSIEDGLKRQLLARKRE-----EYALRKKRKLTVSPSSPLH 282 +ECP+CR K+ S R LR DP FD L+ K+ D + +E +Q +A+ ++ N +ALQ+SIE G+K Q R++ +Y RK+R P S +H Sbjct: 154 KECPTCRKKLVSKRSLRPDPNFDALINKIWP-DRQIYEQMQQKAMEMFHQQSNVEALQKSIEAGMKAQAANRRQRVQGSYDYEKRKRR-----PRSDVH 246
BLAST of mRNA_M-pyrifera_M_contig99567.22895.1 vs. uniprot
Match: A0A7S2H2F0_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H2F0_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 1.490e-7 Identity = 29/75 (38.67%), Postives = 48/75 (64.00%), Query Frame = 1 Query: 1 RECPSCRVKVPSHRYLRADPRFDDLVCKLLGGDVERFEDIQSEAVAEINKNFN-RDALQRSIEDGLKRQLLARKR 222 +ECPSCR+ VPS R LR D FD L+ ++ +E +E+ + + ++++NKN N +A +S GL+ QL R++ Sbjct: 85 KECPSCRIHVPSRRSLRYDANFDSLIARIYPN-LEEYEEHEEKMISDLNKNRNLNNAFTQSCRQGLRNQLQHRRK 158
BLAST of mRNA_M-pyrifera_M_contig99567.22895.1 vs. uniprot
Match: A0A183EL53_9BILA (RING-type E3 ubiquitin transferase n=1 Tax=Gongylonema pulchrum TaxID=637853 RepID=A0A183EL53_9BILA) HSP 1 Score: 56.6 bits (135), Expect = 3.330e-7 Identity = 35/88 (39.77%), Postives = 54/88 (61.36%), Query Frame = 1 Query: 1 RECPSCRVKVPSHRYLRADPRFDDLVCKLLGGDVERFEDIQSEAVAEINKNFNRDALQRSIEDGLKRQLLARKRE-----EYALRKKR 249 +ECP+CR K+ S R LR DP FD L+ K+ D + +E +Q +A+ ++ N +ALQ+SIE G+K Q R++ +Y RK+R Sbjct: 116 KECPTCRKKLVSKRSLRPDPNFDALINKIWP-DRQIYEQMQQKAMEMFHQQSNVEALQKSIEAGMKAQAANRRQRVQGSYDYEKRKRR 202
BLAST of mRNA_M-pyrifera_M_contig99567.22895.1 vs. uniprot
Match: A0A0B2W058_TOXCA (RING-type E3 ubiquitin transferase n=2 Tax=Toxocara canis TaxID=6265 RepID=A0A0B2W058_TOXCA) HSP 1 Score: 55.5 bits (132), Expect = 8.790e-7 Identity = 31/73 (42.47%), Postives = 47/73 (64.38%), Query Frame = 1 Query: 1 RECPSCRVKVPSHRYLRADPRFDDLVCKLLGGDVERFEDIQSEAVAEINKNFNRDALQRSIEDGLKRQLLARK 219 +ECP+CR K+ S R LR DP FD L+ K+ D + +E +Q +A+ ++ N +ALQ+SIE G+K Q R+ Sbjct: 85 KECPTCRKKLVSKRSLRPDPNFDALINKIWP-DRQIYEQMQQKAMDMFHQQSNVEALQKSIEAGMKAQAANRR 156 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99567.22895.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig99567.22895.1 >prot_M-pyrifera_M_contig99567.22895.1 ID=prot_M-pyrifera_M_contig99567.22895.1|Name=mRNA_M-pyrifera_M_contig99567.22895.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=99bp RECPSCRVKVPSHRYLRADPRFDDLVCKLLGGDVERFEDIQSEAVAEINKback to top mRNA from alignment at M-pyrifera_M_contig99567:5..301+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig99567.22895.1 ID=mRNA_M-pyrifera_M_contig99567.22895.1|Name=mRNA_M-pyrifera_M_contig99567.22895.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=297bp|location=Sequence derived from alignment at M-pyrifera_M_contig99567:5..301+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig99567:5..301+ >mRNA_M-pyrifera_M_contig99567.22895.1 ID=mRNA_M-pyrifera_M_contig99567.22895.1|Name=mRNA_M-pyrifera_M_contig99567.22895.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=594bp|location=Sequence derived from alignment at M-pyrifera_M_contig99567:5..301+ (Macrocystis pyrifera P11B4 male)back to top |