mRNA_M-pyrifera_M_contig9950.22890.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig9950.22890.1 vs. uniprot
Match: D7G2W6_ECTSI (Putative growth-on protein GRO10 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2W6_ECTSI) HSP 1 Score: 233 bits (593), Expect = 1.360e-70 Identity = 112/123 (91.06%), Postives = 119/123 (96.75%), Query Frame = 1 Query: 1 LQDLFGCCLCATFLATIRLPSIKVATFLLCLAFLYDIFWVFCSSSLFGESVMVKVATGGEITQDPTFCEKYPTASGCQVESLPMLLEIPRLFDYTGGYAMLGLGDIVIPGLLLSFAHRFDVSV 369 LQ+LFGCCLCATFL+TIRLPSIKVATFLLCLAFLYDIFWVF S LFGESVMVKVATGGEITQDPTFCEKYPT+ GCQVESLPMLLE+PRL+DYTGGYAMLGLGDIVIPGLLLSFAHR+D+SV Sbjct: 429 LQNLFGCCLCATFLSTIRLPSIKVATFLLCLAFLYDIFWVFLSPQLFGESVMVKVATGGEITQDPTFCEKYPTSDGCQVESLPMLLELPRLWDYTGGYAMLGLGDIVIPGLLLSFAHRYDLSV 551
BLAST of mRNA_M-pyrifera_M_contig9950.22890.1 vs. uniprot
Match: A0A7S2BZ12_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BZ12_9STRA) HSP 1 Score: 167 bits (423), Expect = 2.660e-49 Identity = 82/123 (66.67%), Postives = 96/123 (78.05%), Query Frame = 1 Query: 1 LQDLFGCCLCATFLATIRLPSIKVATFLLCLAFLYDIFWVFCSSSLFGESVMVKVATGGEITQDPTFCEKYPTASGCQVESLPMLLEIPRLFDYTGGYAMLGLGDIVIPGLLLSFAHRFDVSV 369 LQDLFG CLC FL+ IR ++KVA LL +AFLYDIF+VF S F ESVMVKVATG + T DP +CEKYPT S CQ LPMLL +PR+ DYTGGY MLGLGDIV+PGLL++FA R+DVS+ Sbjct: 34 LQDLFGMCLCVLFLSVIRFSNMKVAALLLSMAFLYDIFFVFISPYFFSESVMVKVATGNQPTADPDYCEKYPTDSDCQSTELPMLLLLPRIDDYTGGYTMLGLGDIVLPGLLVAFAARYDVSI 156
BLAST of mRNA_M-pyrifera_M_contig9950.22890.1 vs. uniprot
Match: A0A7S2H102_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H102_9STRA) HSP 1 Score: 172 bits (435), Expect = 5.500e-48 Identity = 82/121 (67.77%), Postives = 97/121 (80.17%), Query Frame = 1 Query: 4 QDLFGCCLCATFLATIRLPSIKVATFLLCLAFLYDIFWVFCSSSLFGESVMVKVATGGEITQDPTFCEKYPTASGCQVESLPMLLEIPRLFDYTGGYAMLGLGDIVIPGLLLSFAHRFDVS 366 QD+FG CLC FL+ IR +++VAT LLC+AF YDIF+VF S F ESVMVKVATG + T+DP +CEKYPT S C LPMLLE+PR+FDYTGGY MLGLGDIV+PGLL+SFA R+DVS Sbjct: 414 QDIFGMCLCVLFLSVIRFSNVRVATLLLCMAFFYDIFFVFISPIFFTESVMVKVATGSQPTKDPDYCEKYPTDSECISTELPMLLELPRIFDYTGGYTMLGLGDIVLPGLLVSFAIRYDVS 534
BLAST of mRNA_M-pyrifera_M_contig9950.22890.1 vs. uniprot
Match: A0A836CBZ5_9STRA (Putative growth-on protein GRO10 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBZ5_9STRA) HSP 1 Score: 167 bits (422), Expect = 3.160e-46 Identity = 82/122 (67.21%), Postives = 95/122 (77.87%), Query Frame = 1 Query: 1 LQDLFGCCLCATFLATIRLPSIKVATFLLCLAFLYDIFWVFCSSSLFGESVMVKVATGGEITQDPTFCEKYPTASGCQVESLPMLLEIPRLFDYTGGYAMLGLGDIVIPGLLLSFAHRFDVS 366 LQDLFGC LC FLA++RL +++VA LL LAF+YDIFWVF S LF ESVMV VATGG+ T DP CEKYP GC V +LPMLL++PR+ DY GG MLGLGDIV+PGLLLSFA RFD + Sbjct: 411 LQDLFGCSLCVVFLASLRLTNLRVAAVLLSLAFVYDIFWVFLSPFLFSESVMVAVATGGDSTVDPLTCEKYPDTHGCVVHTLPMLLKLPRIGDYQGGSVMLGLGDIVLPGLLLSFAARFDAA 532
BLAST of mRNA_M-pyrifera_M_contig9950.22890.1 vs. uniprot
Match: A0A7S0C0P9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C0P9_9STRA) HSP 1 Score: 142 bits (358), Expect = 2.090e-40 Identity = 75/122 (61.48%), Postives = 89/122 (72.95%), Query Frame = 1 Query: 4 QDLFGCCLCATFLATIRLPSIKVATFLLCLAFLYDIFWVFCSSSLF-GESVMVKVAT-GGEITQDPTFCEKYPTASGCQVES-LPMLLEIPRLFDYTGGYAMLGLGDIVIPGLLLSFAHRFD 360 QD+ GCC+C FL+ I+L SIKV T LL F+YDIF+VF + LF GESVM+ VAT GG DP FCEKYP C+ + LPMLL +PRLFDY GG ++LGLGDIVIPGLLLSF R+D Sbjct: 56 QDVMGCCVCVVFLSIIKLQSIKVGTILLVALFIYDIFFVFITPLLFNGESVMITVATSGGAPAGDPNFCEKYPRDDDCEGGNPLPMLLTVPRLFDYLGGMSLLGLGDIVIPGLLLSFTARYD 177
BLAST of mRNA_M-pyrifera_M_contig9950.22890.1 vs. uniprot
Match: A0A8J2X1D8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X1D8_9STRA) HSP 1 Score: 150 bits (379), Expect = 3.210e-40 Identity = 76/119 (63.87%), Postives = 91/119 (76.47%), Query Frame = 1 Query: 4 QDLFGCCLCATFLATIRLPSIKVATFLLCLAFLYDIFWVFCSSSLFGESVMVKVATGGEITQDPTFCEKYPTASGCQVESLPMLLEIPRLFDYTGGYAMLGLGDIVIPGLLLSFAHRFD 360 QDLFG CLC FL+ I+L S++VA+ LLC+AF YDIF+VF S LFGESVMV+VATG T+D +CEKYP CQ +SLPMLL +PR FD GY MLGLGDIV+PGLL++FA R D Sbjct: 388 QDLFGICLCVLFLSVIKLSSLRVASLLLCMAFCYDIFFVFISPHLFGESVMVRVATGKAPTKDADYCEKYPDDKDCQSQSLPMLLLLPR-FDGLSGYTMLGLGDIVLPGLLVAFAARCD 505
BLAST of mRNA_M-pyrifera_M_contig9950.22890.1 vs. uniprot
Match: F0YJD8_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJD8_AURAN) HSP 1 Score: 142 bits (357), Expect = 5.190e-40 Identity = 71/124 (57.26%), Postives = 87/124 (70.16%), Query Frame = 1 Query: 1 LQDLFGCCLCATFLATIRLPSIKVATFLLCLAFLYDIFWVFCSSSLFGESVMVKVATGGEITQDPTFCEKYPTASGCQVESLPMLLEIPRLFDYTGGYAMLGLGDIVIPGLLLSFAHRFDVSVS 372 LQD FG CLC FL I+L S++VA LL +AF YDIF+VF S F ES+MVKVATG ++D +CEKYP CQ LPMLL +PR + GGY MLGLGDIV+PGLL+SFA R+D + + Sbjct: 33 LQDTFGMCLCVLFLNVIKLNSLRVAAMLLSMAFCYDIFFVFLSPYFFEESIMVKVATGKGPSKDADYCEKYPADDDCQSTQLPMLLMLPRFGEVGGGYTMLGLGDIVLPGLLVSFAARYDAAAA 156
BLAST of mRNA_M-pyrifera_M_contig9950.22890.1 vs. uniprot
Match: A0A7S2R3L5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R3L5_9STRA) HSP 1 Score: 147 bits (371), Expect = 4.040e-39 Identity = 75/123 (60.98%), Postives = 89/123 (72.36%), Query Frame = 1 Query: 1 LQDLFGCCLCATFLATIRLPSIKVATFLLCLAFLYDIFWVFCSSSLFGESVMVKVATGGEITQDPTFCEKYPTASGCQVESLPMLLEIPRLFDYTGGYAMLGLGDIVIPGLLLSFAHRFDVSV 369 LQDLFG CLC FL IRLP+++VA LL LAF YDIF+VF S ++F +SVMVKVA+G T D FCEKYP+ + CQ LPMLL PR+ DY GY MLGLGDIV+PGLL+ F RFD + Sbjct: 355 LQDLFGVCLCLLFLQIIRLPNLRVAAQLLSLAFAYDIFFVFISPAIFKQSVMVKVASGSGPTADEDFCEKYPSDADCQSWELPMLLLFPRVGDYLEGYTMLGLGDIVLPGLLVCFVARFDALI 477
BLAST of mRNA_M-pyrifera_M_contig9950.22890.1 vs. uniprot
Match: W7TAM5_9STRA (Signal peptide peptidase-aspartyl protease family n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAM5_9STRA) HSP 1 Score: 147 bits (371), Expect = 8.930e-39 Identity = 74/121 (61.16%), Postives = 91/121 (75.21%), Query Frame = 1 Query: 1 LQDLFGCCLCATFLATIRLPSIKVATFLLCLAFLYDIFWVFCSSSLFGESVMVKVATGGEITQDPTFCEKYPTASGCQV-ESLPMLLEIPRLFDYTGGYAMLGLGDIVIPGLLLSFAHRFD 360 LQ++ G LC FL+ +R P+IKVAT LL LAFLYDIF+VF S F ESVM+KVATGG D TFCEKYP C+V + LPMLL +PR+ DY GG+ MLGLGDI++PGLL++FA R+D Sbjct: 451 LQNIMGVSLCILFLSLVRFPNIKVATILLSLAFLYDIFFVFLSPIFFQESVMIKVATGGAPRADETFCEKYPEDEKCRVRDMLPMLLVLPRINDYAGGFTMLGLGDIILPGLLVAFAARYD 571
BLAST of mRNA_M-pyrifera_M_contig9950.22890.1 vs. uniprot
Match: A0A7S3KYI1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KYI1_9STRA) HSP 1 Score: 146 bits (369), Expect = 1.780e-38 Identity = 76/125 (60.80%), Postives = 94/125 (75.20%), Query Frame = 1 Query: 4 QDLFGCCLCATFLATIRLPSIKVATFLLCLAFLYDIFWVFCSSSLFGESVMVKVAT-GGEITQDPTFCEKYPTASGCQV-ESLPMLLEIPRLFDYTGGYAMLGLGDIVIPGLLLSFAHRFDVSVS 372 QD+FG C+C FL I+L S+KVA+ LL +AF YDIF+VF S +F +SVM+ VAT GG T DP +CEKYP SGCQ + LPMLL +PRLFDY GG +LGLGDIV+PGLL+S+A RFD + S Sbjct: 467 QDVFGICMCVLFLQVIKLNSLKVASALLIVAFFYDIFFVFLSPLIFSKSVMIDVATSGGPPTADPLWCEKYPNDSGCQGGDPLPMLLTMPRLFDYEGGSNLLGLGDIVLPGLLVSYAARFDAAKS 591 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9950.22890.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9950.22890.1 >prot_M-pyrifera_M_contig9950.22890.1 ID=prot_M-pyrifera_M_contig9950.22890.1|Name=mRNA_M-pyrifera_M_contig9950.22890.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=124bp LQDLFGCCLCATFLATIRLPSIKVATFLLCLAFLYDIFWVFCSSSLFGESback to top mRNA from alignment at M-pyrifera_M_contig9950:3419..4636+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig9950.22890.1 ID=mRNA_M-pyrifera_M_contig9950.22890.1|Name=mRNA_M-pyrifera_M_contig9950.22890.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1218bp|location=Sequence derived from alignment at M-pyrifera_M_contig9950:3419..4636+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig9950:3419..4636+ >mRNA_M-pyrifera_M_contig9950.22890.1 ID=mRNA_M-pyrifera_M_contig9950.22890.1|Name=mRNA_M-pyrifera_M_contig9950.22890.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=744bp|location=Sequence derived from alignment at M-pyrifera_M_contig9950:3419..4636+ (Macrocystis pyrifera P11B4 male)back to top |