mRNA_M-pyrifera_M_contig99398.22870.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig99398.22870.1
Unique NamemRNA_M-pyrifera_M_contig99398.22870.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig99398.22870.1 vs. uniprot
Match: A0A5A8C6N9_CAFRO (N-acetyltransferase domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C6N9_CAFRO)

HSP 1 Score: 91.7 bits (226), Expect = 1.880e-21
Identity = 43/70 (61.43%), Postives = 54/70 (77.14%), Query Frame = 1
Query:    1 YWAYHLATWPDISKVAEDEEGNIVGYVLAKIDDMDDPKKRHGHITSLAVRRTYRKLGLATKLMNASRKTL 210
            Y+ Y L TWP++SKVA D  G +VGYVLAKI+D  D KKRHGH+TS+A   +YRK GLATKLM AS +++
Sbjct:   32 YYLYTLVTWPELSKVAVDPAGRVVGYVLAKIEDERDAKKRHGHVTSVATLDSYRKHGLATKLMRASMRSM 101          
BLAST of mRNA_M-pyrifera_M_contig99398.22870.1 vs. uniprot
Match: A0A812MRI9_9DINO (NAA10 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812MRI9_9DINO)

HSP 1 Score: 90.5 bits (223), Expect = 1.900e-21
Identity = 43/66 (65.15%), Postives = 51/66 (77.27%), Query Frame = 1
Query:    1 YWAYHLATWPDISKVAEDEEGNIVGYVLAKIDDMDDPKKRHGHITSLAVRRTYRKLGLATKLMNAS 198
            Y+ Y L TWP++SKVA D  G +VGYVLAKI+D  D KKRHGH+TS+A   +YRK GLATKLM AS
Sbjct:   45 YYLYTLVTWPELSKVAVDPAGRVVGYVLAKIEDERDAKKRHGHVTSVATLDSYRKHGLATKLMRAS 110          
BLAST of mRNA_M-pyrifera_M_contig99398.22870.1 vs. uniprot
Match: A0A1B0GP26_PHLPP (N-terminal amino-acid N(alpha)-acetyltransferase NatA n=1 Tax=Phlebotomus papatasi TaxID=29031 RepID=A0A1B0GP26_PHLPP)

HSP 1 Score: 88.6 bits (218), Expect = 2.740e-21
Identity = 42/65 (64.62%), Postives = 55/65 (84.62%), Query Frame = 1
Query:    1 YWAYHLATWPDISKVAEDEEGNIVGYVLAKIDDMDDPKK-RHGHITSLAVRRTYRKLGLATKLMN 192
            Y+ YH  TWP +S VAED++GNIVGYVLAK+++ D  ++ +HGHITSLAV+R+YR+LGLA KLMN
Sbjct:   30 YYFYHGLTWPQLSYVAEDDKGNIVGYVLAKMEEPDPGEESKHGHITSLAVKRSYRRLGLAQKLMN 94          
BLAST of mRNA_M-pyrifera_M_contig99398.22870.1 vs. uniprot
Match: A0A6A4WGV8_AMPAM (N-terminal amino-acid N(alpha)-acetyltransferase NatA n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4WGV8_AMPAM)

HSP 1 Score: 89.4 bits (220), Expect = 2.910e-21
Identity = 42/71 (59.15%), Postives = 56/71 (78.87%), Query Frame = 1
Query:    1 YWAYHLATWPDISKVAEDEEGNIVGYVLAKIDD-MDDPKKRHGHITSLAVRRTYRKLGLATKLMNASRKTL 210
            Y+ YH  +WP +S VAEDE GNIVGYVLAK+++  +D   RHGHITSLAV+R++R+LGLA KLMN + + +
Sbjct:   30 YYFYHALSWPQLSYVAEDERGNIVGYVLAKMEEETEDDDDRHGHITSLAVKRSHRRLGLAQKLMNQTARAM 100          
BLAST of mRNA_M-pyrifera_M_contig99398.22870.1 vs. uniprot
Match: UPI0018CEC98A (N-alpha-acetyltransferase daf-31 n=1 Tax=Teleopsis dalmanni TaxID=139649 RepID=UPI0018CEC98A)

HSP 1 Score: 90.9 bits (224), Expect = 3.590e-21
Identity = 41/70 (58.57%), Postives = 57/70 (81.43%), Query Frame = 1
Query:    1 YWAYHLATWPDISKVAEDEEGNIVGYVLAKIDDMDDPKKRHGHITSLAVRRTYRKLGLATKLMNASRKTL 210
            Y+ YH  TWP +S VAED++GNIVGYVLAK+++ +  + +HGHITSLAV+R+YR+LGLA KLMN + + +
Sbjct:   30 YYFYHGLTWPQLSYVAEDDKGNIVGYVLAKMEEPEGEEIKHGHITSLAVKRSYRRLGLAQKLMNQASQAM 99          
BLAST of mRNA_M-pyrifera_M_contig99398.22870.1 vs. uniprot
Match: D8TTU6_VOLCA (N-acetyltransferase domain-containing protein n=4 Tax=Chlamydomonadales TaxID=3042 RepID=D8TTU6_VOLCA)

HSP 1 Score: 89.7 bits (221), Expect = 6.090e-21
Identity = 42/70 (60.00%), Postives = 56/70 (80.00%), Query Frame = 1
Query:    1 YWAYHLATWPDISKVAEDEEGNIVGYVLAKIDDMDDPKKRHGHITSLAVRRTYRKLGLATKLMNASRKTL 210
            Y+ YH+ +WP + +VAED +G IVGYVLAK++  +D  + HGHITS+AV RT+RKLGLATKLMNA+ K +
Sbjct:   31 YYLYHILSWPQLLQVAEDYDGKIVGYVLAKME--EDASEPHGHITSVAVARTHRKLGLATKLMNATHKAM 98          
BLAST of mRNA_M-pyrifera_M_contig99398.22870.1 vs. uniprot
Match: A0A1X6MUY9_9APHY (N-acetyltransferase domain-containing protein n=3 Tax=Agaricomycetes incertae sedis TaxID=355688 RepID=A0A1X6MUY9_9APHY)

HSP 1 Score: 89.0 bits (219), Expect = 8.250e-21
Identity = 40/71 (56.34%), Postives = 58/71 (81.69%), Query Frame = 1
Query:    1 YWAYHLATWPDISKVAEDEEGNIVGYVLAKID-DMDDPKKRHGHITSLAVRRTYRKLGLATKLMNASRKTL 210
            Y+ YHL TWP +S VAED +G IVGY+LAK++ D+DD +++HGH+TS++V R+YR+LGLA KLM  S++ +
Sbjct:   30 YYMYHLLTWPQLSYVAEDNKGRIVGYILAKMEEDVDDSEEQHGHVTSISVLRSYRRLGLAKKLMVQSQEAM 100          
BLAST of mRNA_M-pyrifera_M_contig99398.22870.1 vs. uniprot
Match: A0A7R9VDV2_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VDV2_9CHLO)

HSP 1 Score: 89.4 bits (220), Expect = 1.040e-20
Identity = 40/70 (57.14%), Postives = 54/70 (77.14%), Query Frame = 1
Query:    1 YWAYHLATWPDISKVAEDEEGNIVGYVLAKIDDMDDPKKRHGHITSLAVRRTYRKLGLATKLMNASRKTL 210
            Y+ YH+ +WP +  VAED +GNIVGYVLAK+++   P   HGHITS+AV RT+RKLG+AT+LM A+ K +
Sbjct:   37 YYMYHILSWPQLLHVAEDYDGNIVGYVLAKMEEDPGPNDCHGHITSVAVARTHRKLGIATRLMEATHKAM 106          
BLAST of mRNA_M-pyrifera_M_contig99398.22870.1 vs. uniprot
Match: G7E3X6_MIXOS (N-acetyltransferase domain-containing protein n=1 Tax=Mixia osmundae (strain CBS 9802 / IAM 14324 / JCM 22182 / KY 12970) TaxID=764103 RepID=G7E3X6_MIXOS)

HSP 1 Score: 88.2 bits (217), Expect = 1.080e-20
Identity = 41/70 (58.57%), Postives = 55/70 (78.57%), Query Frame = 1
Query:    1 YWAYHLATWPDISKVAEDEEGNIVGYVLAKIDDMDDPKKRHGHITSLAVRRTYRKLGLATKLMNASRKTL 210
            Y+ +H  TWP +S VAEDE+G IVGY+LAK++D DD K+  GH+TS++V RTYR+LGLA KLM  S+K +
Sbjct:   17 YYLFHALTWPQLSYVAEDEQGKIVGYILAKMND-DDAKECSGHVTSISVLRTYRRLGLANKLMTLSQKAM 85          
BLAST of mRNA_M-pyrifera_M_contig99398.22870.1 vs. uniprot
Match: A0A2M3Z6V1_9DIPT (N-terminal amino-acid N(alpha)-acetyltransferase NatA n=5 Tax=Nyssorhynchus TaxID=44543 RepID=A0A2M3Z6V1_9DIPT)

HSP 1 Score: 89.0 bits (219), Expect = 2.060e-20
Identity = 43/71 (60.56%), Postives = 57/71 (80.28%), Query Frame = 1
Query:    1 YWAYHLATWPDISKVAEDEEGNIVGYVLAKIDDMDDPKKR-HGHITSLAVRRTYRKLGLATKLMNASRKTL 210
            Y+ YH  TWP +S VAEDE+GNIVGYVLAK+++ +  ++  HGHITSLAV+R+YR+LGLA KLMN + K +
Sbjct:   30 YYFYHGLTWPQLSYVAEDEKGNIVGYVLAKMEEPEPGEESTHGHITSLAVKRSYRRLGLAQKLMNQASKAM 100          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99398.22870.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8C6N9_CAFRO1.880e-2161.43N-acetyltransferase domain-containing protein n=1 ... [more]
A0A812MRI9_9DINO1.900e-2165.15NAA10 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A1B0GP26_PHLPP2.740e-2164.62N-terminal amino-acid N(alpha)-acetyltransferase N... [more]
A0A6A4WGV8_AMPAM2.910e-2159.15N-terminal amino-acid N(alpha)-acetyltransferase N... [more]
UPI0018CEC98A3.590e-2158.57N-alpha-acetyltransferase daf-31 n=1 Tax=Teleopsis... [more]
D8TTU6_VOLCA6.090e-2160.00N-acetyltransferase domain-containing protein n=4 ... [more]
A0A1X6MUY9_9APHY8.250e-2156.34N-acetyltransferase domain-containing protein n=3 ... [more]
A0A7R9VDV2_9CHLO1.040e-2057.14Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
G7E3X6_MIXOS1.080e-2058.57N-acetyltransferase domain-containing protein n=1 ... [more]
A0A2M3Z6V1_9DIPT2.060e-2060.56N-terminal amino-acid N(alpha)-acetyltransferase N... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99398contigM-pyrifera_M_contig99398:75..402 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score92.0
Seed ortholog evalue1.2e-16
Seed eggNOG ortholog3067.XP_002949928.1
KEGG koko:K00670,ko:K20791
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001101,GO:0003006,GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006464,GO:0006473,GO:0006474,GO:0006475,GO:0006807,GO:0006950,GO:0007275,GO:0008080,GO:0008150,GO:0008152,GO:0009414,GO:0009415,GO:0009628,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010035,GO:0010154,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0017198,GO:0018002,GO:0018193,GO:0018200,GO:0018209,GO:0019538,GO:0022414,GO:0022626,GO:0030920,GO:0031248,GO:0031365,GO:0031414,GO:0031415,GO:0032501,GO:0032502,GO:0032991,GO:0034212,GO:0036211,GO:0042221,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0050896,GO:0051604,GO:0061458,GO:0071704,GO:1901564,GO:1901700,GO:1902493,GO:1902494,GO:1990189,GO:1990190,GO:1990234,GO:1990904
EggNOG free text desc.Acetyltransferase (GNAT) domain
EggNOG OGs34JD0@3041,37HXY@33090,COG0456@1,KOG3235@2759
Ec32 ortholog descriptionAcetyltransferase (GNAT) domain protein
Ec32 orthologEc-24_004370.1
EC2.3.1.255,2.3.1.256
COG Functional cat.S
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036,ko04131
Exons2
Model size219
Cds size219
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816911.7371993-CDS-M-pyrifera_M_contig99398:74..2511622816911.7371993-CDS-M-pyrifera_M_contig99398:74..251Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99398 75..251 -
1692278251.1994631-CDS-M-pyrifera_M_contig99398:74..2511692278251.1994631-CDS-M-pyrifera_M_contig99398:74..251Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99398 75..251 -
1622816911.7508821-CDS-M-pyrifera_M_contig99398:360..4021622816911.7508821-CDS-M-pyrifera_M_contig99398:360..402Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99398 361..402 -
1692278251.2204168-CDS-M-pyrifera_M_contig99398:360..4021692278251.2204168-CDS-M-pyrifera_M_contig99398:360..402Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99398 361..402 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99398.22870.1prot_M-pyrifera_M_contig99398.22870.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig99398 75..402 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig99398.22870.1

>prot_M-pyrifera_M_contig99398.22870.1 ID=prot_M-pyrifera_M_contig99398.22870.1|Name=mRNA_M-pyrifera_M_contig99398.22870.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=73bp
YWAYHLATWPDISKVAEDEEGNIVGYVLAKIDDMDDPKKRHGHITSLAVR
RTYRKLGLATKLMNASRKTLFL*
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mRNA from alignment at M-pyrifera_M_contig99398:75..402-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig99398.22870.1 ID=mRNA_M-pyrifera_M_contig99398.22870.1|Name=mRNA_M-pyrifera_M_contig99398.22870.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=328bp|location=Sequence derived from alignment at M-pyrifera_M_contig99398:75..402- (Macrocystis pyrifera P11B4 male)
TATTGGGCGTACCATTTGGCCACCTGGCCCGATATCTCAAAAGTACAGCC CCATTCTCCCCCATCCCCTCCCTCTCCAATCACTTCCTACCCCTCAACTT TTCCCAATCACCCAAAATTCCAACTCTACTCTATTTTCATTTCCTGAACA GGTTGCTGAGGACGAGGAAGGGAACATTGTTGGTTATGTGTTGGCCAAAA TTGATGATATGGACGATCCTAAGAAGCGTCATGGCCATATTACAAGCCTG GCTGTGCGTCGCACGTATCGCAAGCTGGGATTGGCCACAAAGTTGATGAA TGCCTCTCGTAAGACCCTTTTTCTTTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig99398:75..402-

>mRNA_M-pyrifera_M_contig99398.22870.1 ID=mRNA_M-pyrifera_M_contig99398.22870.1|Name=mRNA_M-pyrifera_M_contig99398.22870.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=438bp|location=Sequence derived from alignment at M-pyrifera_M_contig99398:75..402- (Macrocystis pyrifera P11B4 male)
TATTGGGCGTACCATTTGGCCACCTGGCCCGATATCTCAAAATATTGGGC
GTACCATTTGGCCACCTGGCCCGATATCTCAAAAGTTGCTGAGGACGAGG
AAGGGAACATTGTTGGTTATGTGTTGGCCAAAATTGATGATATGGACGAT
CCTAAGAAGCGTCATGGCCATATTACAAGCCTGGCTGTGCGTCGCACGTA
TCGCAAGCTGGGATTGGCCACAAAGTTGATGAATGCCTCTCGTAAGACCC
TTTTTCTTTGAGTTGCTGAGGACGAGGAAGGGAACATTGTTGGTTATGTG
TTGGCCAAAATTGATGATATGGACGATCCTAAGAAGCGTCATGGCCATAT
TACAAGCCTGGCTGTGCGTCGCACGTATCGCAAGCTGGGATTGGCCACAA
AGTTGATGAATGCCTCTCGTAAGACCCTTTTTCTTTGA
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