mRNA_M-pyrifera_M_contig99387.22865.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig99387.22865.1 vs. uniprot
Match: A0A6N9GD17_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9GD17_9ACTN) HSP 1 Score: 213 bits (543), Expect = 7.310e-66 Identity = 103/151 (68.21%), Postives = 121/151 (80.13%), Query Frame = 1 Query: 4 VLSAPVGTFLFLLWSEREQAGWRAPVDAQRDLRGEITEPVTRLIRALDAGLRGDEGELFHGLAAIILIGLAVYAVRRLSTDLWAYAVPSTLLLIAADNLNSMERYALGVFPLVIAAAMISRSDRFDRWLPTASAVALTVVTTLALNGVYVP 456 V SAP+GT FL+W+ER Q GWR P+DAQ +LRG + EP+TR+I AL G++GD GEL HG AA++L+ L V AVRRLSTDLW Y+VPSTLLL AA+NLNSMERYAL VFPLVIAA ++S + RWLPTASAVALT T LALNGVYVP Sbjct: 216 VASAPLGTLTFLVWAERAQGGWRVPIDAQEELRGAVREPITRIITALVEGVKGDAGELLHGTAAVVLVFLLVVAVRRLSTDLWVYSVPSTLLLFAAENLNSMERYALAVFPLVIAAGIVSHASLLRRWLPTASAVALTSFTILALNGVYVP 366
BLAST of mRNA_M-pyrifera_M_contig99387.22865.1 vs. uniprot
Match: A0A6N9EU98_9ACTN (Uncharacterized protein n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9EU98_9ACTN) HSP 1 Score: 152 bits (384), Expect = 4.190e-42 Identity = 80/152 (52.63%), Postives = 101/152 (66.45%), Query Frame = 1 Query: 1 AVLSAPVGTFLFLLWSEREQAGWRAPVDAQRDLRGEITEPVTRLIRALDAGLRGDEGELFHGLAAIILIGLAVYAVRRLSTDLWAYAVPSTLLLIAADNLNSMERYALGVFPLVIAAAMISRSDRFDRWLPTASAVALTVVTTLALNGVYVP 456 AV++ G F LW++ AP+D QR+LRG+ +PV+RL+R G GD GEL H LAA++LI LAV A RRLS + YAV S LL+AA+NLNS+ERYAL FPL+IAAAM SR DRW+ A+ L +TTLA +GVYVP Sbjct: 210 AVVAPLAGAATFGLWAQGALGDASAPLDQQRELRGDFVDPVSRLVRGAWRGAHGDTGELLHFLAAVVLIALAVVAARRLSRPMALYAVVSLALLLAAENLNSLERYALSAFPLMIAAAMASRHRWLDRWIVGAAGAGLVCLTTLAFHGVYVP 361
BLAST of mRNA_M-pyrifera_M_contig99387.22865.1 vs. uniprot
Match: A0A2D6PEK5_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6PEK5_9ACTN) HSP 1 Score: 102 bits (253), Expect = 7.150e-23 Identity = 62/153 (40.52%), Postives = 87/153 (56.86%), Query Frame = 1 Query: 1 AVLSAPVGTFLFLLWSEREQAGWRAPVDAQRDLRGEITEPVTRLIRALDAGLRGDE-GELFHGLAAIILIGLAVYAVRRLSTDLWAYAVPSTLLLIAADNLNSMERYALGVFPLVIAAAMISRSDRFDRWLPTASAVALTVVTTLALNGVYVP 456 AVL PVG F+ W+ AP+ QR+LRG+ +P+ RL+ L D G+ H A+ L+GL V A RRL A+A ++ +AA+NLNS+ERYAL FPLV+A A++ S R +P SA+ + +T LA+ G YVP Sbjct: 215 AVLGGPVGFGAFVWWASELVDEPFAPLVVQRELRGDPVDPLRRLLSGLGELFGPDALGDGLHIPFAVGLVGLVVVAFRRLPLGHAAFAAACLVVALAAENLNSLERYALNGFPLVVALAVLVGSGRLRHLVPAISALGMVSLTVLAVMGEYVP 367
BLAST of mRNA_M-pyrifera_M_contig99387.22865.1 vs. uniprot
Match: A0A355QDS1_9ACTN (Uncharacterized protein n=3 Tax=root TaxID=1 RepID=A0A355QDS1_9ACTN) HSP 1 Score: 100 bits (249), Expect = 2.680e-22 Identity = 59/153 (38.56%), Postives = 85/153 (55.56%), Query Frame = 1 Query: 1 AVLSAPVGTFLFLLWSEREQAGWRAPVDAQRDLRGEITEPVTRLIRALDAGLRGDE-GELFHGLAAIILIGLAVYAVRRLSTDLWAYAVPSTLLLIAADNLNSMERYALGVFPLVIAAAMISRSDRFDRWLPTASAVALTVVTTLALNGVYVP 456 AV+ PVG F+ W+ AP+ QR+ RG+ +P+ RLI L D G+ H A+ + L + A RR+ A+A L+ +AADNLNS+ERYAL FP+V+A A+++ R R +P SAV + +T LA+ G YVP Sbjct: 215 AVIGGPVGFGAFVWWASALVDEPFAPLVVQREFRGDPVDPLRRLIAGLGELFGPDALGDGLHIPFALGFVVLVIVAFRRMPLGYAAFAAACLLVALAADNLNSLERYALNGFPIVVALAVLADDSRLRRLVPAVSAVGMVALTALAVMGEYVP 367
BLAST of mRNA_M-pyrifera_M_contig99387.22865.1 vs. uniprot
Match: A0A800IBM9_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A800IBM9_9ACTN) HSP 1 Score: 98.6 bits (244), Expect = 1.270e-21 Identity = 55/152 (36.18%), Postives = 79/152 (51.97%), Query Frame = 1 Query: 1 AVLSAPVGTFLFLLWSEREQAGWRAPVDAQRDLRGEITEPVTRLIRALDAGLRGDEGELFHGLAAIILIGLAVYAVRRLSTDLWAYAVPSTLLLIAADNLNSMERYALGVFPLVIAAAMISRSDRFDRWLPTASAVALTVVTTLALNGVYVP 456 A+L AP+G +L W+ PV AQR LRG +P +RL L E FH + A+ + L V+++ AYA P L+ +AA+N+NS+ERYA+ FPL++A A + R R +P S L +T A G+YVP Sbjct: 209 ALLGAPLGVSAYLWWAYASTGQPWLPVTAQRSLRGGFVDPFSRLGHGF-GDLWDKNPEAFHLVTALFFLLLLAVVVKKMPLVYGAYAGPVLLVALAAENINSLERYAMSAFPLLVALAFLMEGRRLQRVIPAVSLAGLVCLTAAASLGIYVP 359
BLAST of mRNA_M-pyrifera_M_contig99387.22865.1 vs. uniprot
Match: A0A2E7X9Z8_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E7X9Z8_9ACTN) HSP 1 Score: 87.8 bits (216), Expect = 1.730e-19 Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = 1 Query: 88 QRDLRGEITEPVTRLIRALDAGLRGDE--GELFHGLAAIILIGLAVYAVRRLSTDLWAYAVPSTLLLIAADNLNSMERYALGVFPLVIAAAMISRSDRFDRWLPTASAVALTVVTTLALNGVYVP 456 QR+LRG+ +P+ RL+ L L G E G+ H A+ L+ L V A RRL A+A ++ +AA+NLNS+ERYAL FP+V+A A++ S RF +P SA+ + +T LA+ G YVP Sbjct: 1 QRELRGDPVDPLRRLLSGLGE-LFGPEALGDGLHIPFAVGLVVLVVVAFRRLPLGHAAFAAACLVVALAAENLNSLERYALNGFPIVVALAVLVGSGRFRHLVPAISALGMVSLTVLAVMGEYVP 124
BLAST of mRNA_M-pyrifera_M_contig99387.22865.1 vs. uniprot
Match: A0A381Q0L5_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381Q0L5_9ZZZZ) HSP 1 Score: 88.6 bits (218), Expect = 5.200e-18 Identity = 52/153 (33.99%), Postives = 76/153 (49.67%), Query Frame = 1 Query: 1 AVLSAPVGTFLFLLWSEREQAGWRAPVDAQRDLRGEITEPVTRLIRAL-DAGLRGDEGELFHGLAAIILIGLAVYAVRRLSTDLWAYAVPSTLLLIAADNLNSMERYALGVFPLVIAAAMISRSDRFDRWLPTASAVALTVVTTLALNGVYVP 456 AV PVGT F+ W P+ QR+LRG+ P+ RL+ L D G + H +AA++++ + V R A L+ +AADNLNS+ERY P+V+ A ++ RF + +P S A+ V+ T A G YVP Sbjct: 187 AVAGGPVGTLAFVWWVSSRFDEAFLPLTVQRELRGDPRNPLARLVEGLADLGRSTTWTDGLHAVAAVVVLVVLVALFRAWPARYGVLAGACLLVALAADNLNSLERYVFNGVPVVLGVATLAGYRRFGQLVPVVSGAAMVVLATAAWTGSYVP 339
BLAST of mRNA_M-pyrifera_M_contig99387.22865.1 vs. uniprot
Match: A0A6G0A8R6_9ACTN (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0A8R6_9ACTN) HSP 1 Score: 87.0 bits (214), Expect = 2.700e-17 Identity = 49/152 (32.24%), Postives = 76/152 (50.00%), Query Frame = 1 Query: 1 AVLSAPVGTFLFLLWSEREQAGWRAPVDAQRDLRGEITEPVTRLIRALDAGLRGDEGELFHGLAAIILIGLAVYAVRRLSTDLWAYAVPSTLLLIAADNLNSMERYALGVFPLVIAAAMISRSDRFDRWLPTASAVALTVVTTLALNGVYVP 456 AV +G FL W W P Q DLR + +PV+RLI +D L + + + A++ + L + A RRL AYA S ++ ++A+N++S+ RY + FPL+I A ++R DR +R S + +AL G Y P Sbjct: 227 AVAGPGLGLLSFLGWVGWRFGDWLLPASIQSDLRAGVQDPVSRLIEGIDQILTESQLDAPNIAFALLFVVLLIPAARRLPASYTAYAAVSLIIALSAENIDSIGRYGIMAFPLMIGLAHLARDDRVNRIAMVVSGGTFVALVVMALLGGYTP 378
BLAST of mRNA_M-pyrifera_M_contig99387.22865.1 vs. uniprot
Match: A0A381YM69_9ZZZZ (Uncharacterized protein n=3 Tax=root TaxID=1 RepID=A0A381YM69_9ZZZZ) HSP 1 Score: 86.7 bits (213), Expect = 3.420e-17 Identity = 46/153 (30.07%), Postives = 82/153 (53.59%), Query Frame = 1 Query: 1 AVLSAPVGTFLFLLWSEREQAGWRAPVDAQRDLRGEITEPVTRLIRALDAGLRGDEG-ELFHGLAAIILIGLAVYAVRRLSTDLWAYAVPSTLLLIAADNLNSMERYALGVFPLVIAAAMISRSDRFDRWLPTASAVALTVVTTLALNGVYVP 456 A++S PVG+ +++LW+ AP+ AQ RG +P +R+I+ + L G E H ++A++L+ L V + ++ ++ + A+N+NS+ERYAL FP++++ ++ R +P SA + + T A GVYVP Sbjct: 215 ALISGPVGSGIYILWASLHFDELFAPIKAQESFRGSFVDPFSRVIKGVSRVLTGTSATETLHIISALLLLFLLVKLFKDWPLRYGLFSSSCMVVALGAENINSLERYALNGFPVILSVLLLVSQPRLRLAVPFVSAFCMVSLCTFAWLGVYVP 367
BLAST of mRNA_M-pyrifera_M_contig99387.22865.1 vs. uniprot
Match: A0A538LN56_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538LN56_9ACTN) HSP 1 Score: 84.3 bits (207), Expect = 3.050e-16 Identity = 55/154 (35.71%), Postives = 78/154 (50.65%), Query Frame = 1 Query: 1 AVLSAPVGTFLFLLWSEREQAGWRAPVDAQRDL--RGEITEPVTRLIRALDAGLRGDEGELFHGLAAIILIGLAVYAVRRLSTDLWAYAVPSTLLLIAADNLNSMERYALGVFPLVIAAAMISRSDRFDRWLPTASAVALTVVTTLALNGVYVP 456 AV++ VG +FLLWS PV AQ+ + RG +PVT L + G G H A+ L+ L V R A+A + +L +++ NL+S+ERYAL FPLV+A A ++ S R +R + SA + TLA YVP Sbjct: 256 AVVAPAVGGAIFLLWSWLAYGDPLVPVHAQQAVGQRGGFVDPVTSLGHEARLFVHGHIGSGLHDPWALGLVVLLVVCAFRWPASYTAFAAATLILALSSRNLDSLERYALSAFPLVLAGATLTASGRVERGVLALSAAGMAGYATLAFLNAYVP 409 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99387.22865.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig99387.22865.1 >prot_M-pyrifera_M_contig99387.22865.1 ID=prot_M-pyrifera_M_contig99387.22865.1|Name=mRNA_M-pyrifera_M_contig99387.22865.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=153bp AVLSAPVGTFLFLLWSEREQAGWRAPVDAQRDLRGEITEPVTRLIRALDAback to top mRNA from alignment at M-pyrifera_M_contig99387:230..688- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig99387.22865.1 ID=mRNA_M-pyrifera_M_contig99387.22865.1|Name=mRNA_M-pyrifera_M_contig99387.22865.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=459bp|location=Sequence derived from alignment at M-pyrifera_M_contig99387:230..688- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig99387:230..688- >mRNA_M-pyrifera_M_contig99387.22865.1 ID=mRNA_M-pyrifera_M_contig99387.22865.1|Name=mRNA_M-pyrifera_M_contig99387.22865.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=918bp|location=Sequence derived from alignment at M-pyrifera_M_contig99387:230..688- (Macrocystis pyrifera P11B4 male)back to top |