mRNA_M-pyrifera_M_contig99360.22860.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig99360.22860.1
Unique NamemRNA_M-pyrifera_M_contig99360.22860.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig99360.22860.1 vs. uniprot
Match: A0A179FHH0_METCM (Protein SSH4 n=1 Tax=Pochonia chlamydosporia 170 TaxID=1380566 RepID=A0A179FHH0_METCM)

HSP 1 Score: 70.9 bits (172), Expect = 2.530e-11
Identity = 50/137 (36.50%), Postives = 77/137 (56.20%), Query Frame = 1
Query:    7 LWSVFSSPLHTCAAFGLAKALPTLVRNCGVDVDCRIPGNRRTALHIACMRGQWESAVTLVRSLSADVDAVDNHGQTALHLCARFAPELMHILIS--AGAYLNAKDLMG-EGETPLHCACAYAEAPDAIRLLLESNAD 408
            +W  F  PLHT A  G  + +  LV   G D++ R   +++T LHIA  + +  + +TL+  L ADV A D    TALH+    + E    L+S  +G+ + A +L G +GE+PLH ACA+    + +RLL++  AD
Sbjct: 1034 VWGGFY-PLHTAALEGHDELVRFLVTEEGYDINIRRSSDQQTPLHIAA-QSKSATMITLLMDLGADVVAADQDKDTALHIAVMNSLEACRALLSHISGSGVKAINLPGGDGESPLHQACAWGHI-EIVRLLVDKGAD 1167          
BLAST of mRNA_M-pyrifera_M_contig99360.22860.1 vs. uniprot
Match: A0A4Q7K2L1_METCM (Uncharacterized protein n=1 Tax=Pochonia chlamydosporia 123 TaxID=1052797 RepID=A0A4Q7K2L1_METCM)

HSP 1 Score: 69.3 bits (168), Expect = 5.790e-11
Identity = 50/137 (36.50%), Postives = 77/137 (56.20%), Query Frame = 1
Query:    7 LWSVFSSPLHTCAAFGLAKALPTLVRNCGVDVDCRIPGNRRTALHIACMRGQWESAVTLVRSLSADVDAVDNHGQTALHLCARFAPELMHILIS--AGAYLNAKDLMG-EGETPLHCACAYAEAPDAIRLLLESNAD 408
            +W  F  PLHT A  G  + +  LV   G D++ R   +++T LHIA ++ +  + +TL+  L ADV A D    TALH+      E    L+S  +G+ + A +L G +GE+PLH ACA+    + +RLL++  AD
Sbjct:  104 VWGGFY-PLHTAALEGHDELVRFLVTEEGYDINIRRNTHQQTPLHIA-VQSKSATMITLLMDLGADVAAADQDKDTALHIAVMNNREACRALLSHISGSGVKAINLPGGDGESPLHQACAWGHV-EIMRLLVDKGAD 237          
BLAST of mRNA_M-pyrifera_M_contig99360.22860.1 vs. uniprot
Match: A0A4Z2FE62_9TELE (Ankyrin repeat domain-containing protein 61 n=1 Tax=Liparis tanakae TaxID=230148 RepID=A0A4Z2FE62_9TELE)

HSP 1 Score: 67.0 bits (162), Expect = 4.470e-10
Identity = 59/158 (37.34%), Postives = 80/158 (50.63%), Query Frame = 1
Query:   22 SSPLHTCAAFGLAKALPTLVRNC--GVDVDCRIPGNRRTALHIACMRGQWESAVTLVRSLSADVDAVDNHGQTALHLCARFA-PELMHILISAGAYLNAKDLMGEGETPLHCACAY--------AEAP-DAIRLLLESNADIGAVTVAGHTPLHVAVR 459
            SS  HT       +A   L   C  G++V  +I G+ +TALH++ +R    SA+ ++ S  ADV+AVD+ G T LH+ A     ++M  LI AGA +N   +   G TPLH A           +EA    I  LLE  A+  AV  AG TPL  A R
Sbjct:  117 SSKFHTAVTGKRRQAEACLRLLCEHGINVKSKIEGSHQTALHLS-VRYLAVSAIPILASFGADVNAVDSGGMTPLHMAAGVLHKDIMASLIKAGADMNMA-VRHSGNTPLHLAAVAISMKTTQTSEADMSCISELLEREAEPDAVNNAGLTPLQEACR 272          
BLAST of mRNA_M-pyrifera_M_contig99360.22860.1 vs. uniprot
Match: UPI00189E6BD4 (ankyrin repeat domain-containing protein 61-like n=1 Tax=Sebastes umbrosus TaxID=72105 RepID=UPI00189E6BD4)

HSP 1 Score: 66.6 bits (161), Expect = 6.080e-10
Identity = 54/150 (36.00%), Postives = 79/150 (52.67%), Query Frame = 1
Query:   43 AAFGL---AKALPTLVRNCGVDVDCRIPGNRRTALHIACMRGQWESAVTLVRSLSADVDAVDNHGQTALHLCARFA-PELMHILISAGAYLNAKDLMGEGETPLHCACA---------YAEAPDAIRLLLESNADIGAVTVAGHTPLHVA 453
            A FG+   A+A   L+   G++V+  + G+ +TALH++ +R    SAV ++ S  ADV+AV++ G T LH+ A     ++M  LI AGA +N   +   G TPLH A             +    I  LLE  A+  AV+ AG TPL  A
Sbjct:  125 AVFGVRRQAEACLRLLCEHGINVNAEVEGSHQTALHLS-VRYVALSAVQILTSYGADVNAVNSSGMTPLHMAAGILHKDIMASLIKAGADMN-MGVEHTGNTPLHLAAVAMAMKTTKTLEDDISCISELLEQGAEANAVSKAGMTPLQEA 272          
BLAST of mRNA_M-pyrifera_M_contig99360.22860.1 vs. uniprot
Match: UPI0014475A50 (ankyrin repeat domain-containing protein 61-like n=1 Tax=Epinephelus lanceolatus TaxID=310571 RepID=UPI0014475A50)

HSP 1 Score: 66.6 bits (161), Expect = 6.080e-10
Identity = 54/151 (35.76%), Postives = 78/151 (51.66%), Query Frame = 1
Query:   43 AAFGLAK----ALPTLVRNCGVDVDCRIPGNRRTALHIACMRGQWESAVTLVRSLSADVDAVDNHGQTALHLCARFA-PELMHILISAGAYLNAKDLMGEGETPLHCACA---------YAEAPDAIRLLLESNADIGAVTVAGHTPLHVA 453
            A  GL K     L  L  +C V+V+ ++ G+ +TALH++ +R    SAV ++ S  ADV+AVD+ G T LH+ A     +L+  LI  GA +N K +   G TPLH A             +    I  LLE  A++ ++  AG TPL  A
Sbjct:  125 AVIGLHKQAEACLRLLCEHC-VNVNAKVEGSHQTALHLS-VRYTALSAVQILSSYGADVNAVDSSGMTPLHMAAGILHKDLIASLIKEGADIN-KGVKHSGNTPLHLAAVAMAMKTTKTMQDDLSCISELLERGAEVNSINKAGMTPLQEA 272          
BLAST of mRNA_M-pyrifera_M_contig99360.22860.1 vs. uniprot
Match: UPI001C4B17E3 (ankyrin repeat domain-containing protein 61-like n=1 Tax=Plectropomus leopardus TaxID=160734 RepID=UPI001C4B17E3)

HSP 1 Score: 66.2 bits (160), Expect = 8.280e-10
Identity = 53/143 (37.06%), Postives = 77/143 (53.85%), Query Frame = 1
Query:   58 AKALPTLVRNCGVDVDCRIPGNRRTALHIACMRGQWESAVTLVRSLSADVDAVDNHGQTALHLCARFA-PELMHILISAGAYLNAKDLMGEGETPLHCACAYAEAP----------DAIRLLLESNADIGAVTVAGHTPLHVA 453
            A+A   L+   GV+++  + G+R+TALH++ +R    SAV ++ S  ADV+AVD+ G T LH+ A     ++M  LI  GA +N + +   G TPLH A A A A             I  LL   A++ A+  AG TPL  A
Sbjct:  133 AEACLQLLCERGVNINAEVEGSRQTALHLS-IRHMAPSAVQILSSYGADVNAVDSSGMTPLHMAAGILHKDVMTSLIQEGADINMR-VRHSGNTPLHLA-AMAMAMKTSKTLENDISCISELLGRGAEVDAMNEAGLTPLQEA 272          
BLAST of mRNA_M-pyrifera_M_contig99360.22860.1 vs. uniprot
Match: A0A6A5EDG2_PERFL (Uncharacterized protein n=6 Tax=Percidae TaxID=8165 RepID=A0A6A5EDG2_PERFL)

HSP 1 Score: 65.1 bits (157), Expect = 2.090e-9
Identity = 52/142 (36.62%), Postives = 73/142 (51.41%), Query Frame = 1
Query:   58 AKALPTLVRNCGVDVDCRIPGNRRTALHIACMRGQWESAVTLVRSLSADVDAVDNHGQTALHLCARFA-PELMHILISAGAYLNAKDLMGEGETPLHCACA---------YAEAPDAIRLLLESNADIGAVTVAGHTPLHVA 453
            A+A   L+   GV+V+  + G+ +TALH++ +R    SAV ++ S  ADV+AVD+ G T LH+ A     ++M  LI  GA  N   +   G TPLH A             +    I  LLE  A++ AV  AG TPL  A
Sbjct:  132 AEACLRLLCEHGVNVNAEVEGSHQTALHLS-VRYVALSAVHILASYGADVNAVDSTGMTPLHMAAGILHKDIMANLIKEGADTN-MGVKHSGNTPLHVAAVAMAMKTTQTLGDDISCISELLEHGAEVNAVNKAGLTPLQEA 271          
BLAST of mRNA_M-pyrifera_M_contig99360.22860.1 vs. uniprot
Match: A0A813H5E8_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H5E8_POLGL)

HSP 1 Score: 64.7 bits (156), Expect = 2.940e-9
Identity = 51/146 (34.93%), Postives = 77/146 (52.74%), Query Frame = 1
Query:   25 SPLHTCAAFGLAKALPTLVRNCGVDVDCRIPGNRRTALHIACMRGQWESAVTLVRSLSADVDAVDNHGQTALHLCARFAP-ELMHILISAGA--YLNAKDLMGEGETPLHCACAYAEAPDAIRLLLESNADIGAVTVAGHTPLHVA 453
            +PL   AA  LA  +  L+   G DV+ R  G     +              +V  L ADV  VD+ G TAL + A     E+ ++L+++G+  YL+ K    +G TPL  A A+A  P+A++LL++  AD+GA   AG+TPL +A
Sbjct:  177 TPLFYAAALDLAGIMNLLIEK-GADVNQRAQGELTPLME-----------AVVVGKLQADVGLVDSSGNTALWMAASHGEKEVANLLLTSGSAPYLDQKGK--DGATPL-AAAAWAARPEAMQLLIDWKADVGATNKAGYTPLTLA 307          
BLAST of mRNA_M-pyrifera_M_contig99360.22860.1 vs. uniprot
Match: A0A6H5ISE5_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5ISE5_9HYME)

HSP 1 Score: 64.7 bits (156), Expect = 3.490e-9
Identity = 51/151 (33.77%), Postives = 77/151 (50.99%), Query Frame = 1
Query:   25 SPLHTCAAFGLAKALPTLVRNCGVDVDCRIPGNRR--TALHIACMRGQWESAVTLVRSLSADVDAVDNHGQTALHLCARFAP---ELMHILISAGAYLNAKDLMGEGETPLHCACAYAEAPDAIRLLLESNADIGAVTVAGHTPLHVAVRQ 462
            +PLH  A  G A  L   ++  G +   R   N R  TALH+A      E    L++  SA++DA D+ G+TALH+    +P   ++   LI+  A +N  D  G   TPLH A A  E  + + +L++  AD+ A T  G T L + +R+
Sbjct:  217 TPLHLAAKCGCADTLGXXLKK-GANASLR---NHRAETALHLASRTHSLECVEALLQHSSAEIDAEDSEGKTALHVTMGRSPLTYDVAETLITWKAQVNRADKYGY--TPLHLA-AINELSECVDILIQHGADLSAKTKGGTTALSIILRK 360          
BLAST of mRNA_M-pyrifera_M_contig99360.22860.1 vs. uniprot
Match: UPI000C6F45BD (ankyrin repeat domain-containing protein 61 n=2 Tax=Seriola TaxID=8160 RepID=UPI000C6F45BD)

HSP 1 Score: 63.5 bits (153), Expect = 7.030e-9
Identity = 59/162 (36.42%), Postives = 84/162 (51.85%), Query Frame = 1
Query:   10 WSVFSSPLHTCAAFGL---AKALPTLVRNCGVDVDCRIPG-NRRTALHIACMRGQWESAVTLVRSLSADVDAVDNHGQTALHLCARFA-PELMHILISAGAYLNAKDLMGEGETPLHCACA---------YAEAPDAIRLLLESNADIGAVTVAGHTPLHVA 453
            WS   S L T A   L   AKA   L+   GV+V+ ++ G +++TALH++ +R    SAV ++ S  ADV+AVD++G T LH+ A     +++  LI  GA +N   L   G TPLH A             +  + I  LL+  A+  A   AG TPLH A
Sbjct:   88 WSKPDSKLQT-AVIDLHRKAKACLQLLCEHGVNVNAQVKGESQQTALHLS-VRYTALSAVQILASYGADVNAVDSNGMTPLHMAAGMLHKDIIANLIRQGADIN-MGLKNTGNTPLHLAAVAMAMKTTKTLQDDLNCISELLDHGAEPNAENKAGITPLHEA 246          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99360.22860.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A179FHH0_METCM2.530e-1136.50Protein SSH4 n=1 Tax=Pochonia chlamydosporia 170 T... [more]
A0A4Q7K2L1_METCM5.790e-1136.50Uncharacterized protein n=1 Tax=Pochonia chlamydos... [more]
A0A4Z2FE62_9TELE4.470e-1037.34Ankyrin repeat domain-containing protein 61 n=1 Ta... [more]
UPI00189E6BD46.080e-1036.00ankyrin repeat domain-containing protein 61-like n... [more]
UPI0014475A506.080e-1035.76ankyrin repeat domain-containing protein 61-like n... [more]
UPI001C4B17E38.280e-1037.06ankyrin repeat domain-containing protein 61-like n... [more]
A0A6A5EDG2_PERFL2.090e-936.62Uncharacterized protein n=6 Tax=Percidae TaxID=816... [more]
A0A813H5E8_POLGL2.940e-934.93Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A6H5ISE5_9HYME3.490e-933.77Uncharacterized protein n=1 Tax=Trichogramma brass... [more]
UPI000C6F45BD7.030e-936.42ankyrin repeat domain-containing protein 61 n=2 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99360contigM-pyrifera_M_contig99360:224..688 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score68.2
Seed ortholog evalue3.9e-09
Seed eggNOG ortholog5022.CBX92330
Preferred nameNAS6
KEGG koko:K06694
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0019538,GO:0022607,GO:0032991,GO:0034622,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043248,GO:0043933,GO:0044085,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070682,GO:0071704,GO:0071840,GO:1901564
EggNOG free text desc.Ankyrin repeat
EggNOG OGs1ZZWB@147541,39VDP@33154,3NXYE@4751,3QQ59@4890,4KEXH@92860,COG0666@1,KOG4412@2759
COG Functional cat.O
Best tax levelPleosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03051
Exons1
Model size465
Cds size465
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816911.2696097-CDS-M-pyrifera_M_contig99360:223..6881622816911.2696097-CDS-M-pyrifera_M_contig99360:223..688Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99360 224..688 +
1692278250.9141169-CDS-M-pyrifera_M_contig99360:223..6881692278250.9141169-CDS-M-pyrifera_M_contig99360:223..688Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99360 224..688 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99360.22860.1prot_M-pyrifera_M_contig99360.22860.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig99360 224..688 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig99360.22860.1

>prot_M-pyrifera_M_contig99360.22860.1 ID=prot_M-pyrifera_M_contig99360.22860.1|Name=mRNA_M-pyrifera_M_contig99360.22860.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=155bp
KHLWSVFSSPLHTCAAFGLAKALPTLVRNCGVDVDCRIPGNRRTALHIAC
MRGQWESAVTLVRSLSADVDAVDNHGQTALHLCARFAPELMHILISAGAY
LNAKDLMGEGETPLHCACAYAEAPDAIRLLLESNADIGAVTVAGHTPLHV
AVRQN
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mRNA from alignment at M-pyrifera_M_contig99360:224..688+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig99360.22860.1 ID=mRNA_M-pyrifera_M_contig99360.22860.1|Name=mRNA_M-pyrifera_M_contig99360.22860.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=465bp|location=Sequence derived from alignment at M-pyrifera_M_contig99360:224..688+ (Macrocystis pyrifera P11B4 male)
AAACATCTCTGGAGCGTCTTCAGCAGTCCCCTCCACACGTGCGCTGCGTT CGGCCTCGCCAAGGCACTCCCGACGCTCGTGCGTAACTGTGGCGTAGACG TCGACTGTCGCATCCCTGGCAACCGTCGCACTGCCCTCCACATCGCATGC ATGAGAGGACAGTGGGAGAGTGCGGTGACGCTGGTGAGGTCTCTCTCTGC TGACGTGGACGCGGTGGACAACCACGGCCAGACTGCCCTCCACCTCTGCG CGAGGTTTGCGCCAGAGCTGATGCACATCCTCATCAGCGCTGGCGCTTAC CTCAATGCCAAGGACCTCATGGGCGAGGGAGAAACTCCTCTCCATTGCGC CTGTGCTTACGCGGAAGCTCCCGACGCAATACGCCTCTTGCTCGAGAGCA ACGCAGACATTGGAGCCGTCACTGTGGCTGGCCACACTCCCCTTCACGTG GCCGTCAGGCAGAAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig99360:224..688+

>mRNA_M-pyrifera_M_contig99360.22860.1 ID=mRNA_M-pyrifera_M_contig99360.22860.1|Name=mRNA_M-pyrifera_M_contig99360.22860.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=930bp|location=Sequence derived from alignment at M-pyrifera_M_contig99360:224..688+ (Macrocystis pyrifera P11B4 male)
AAACATCTCTGGAGCGTCTTCAGCAGTCCCCTCCACACGTGCGCTGCGTT
CGGCCTCGCCAAGGCACTCCCGACGCTCGTGCGTAACTGTGGCGTAGACG
TCGACTGTCGCATCCCTGGCAACCGTCGCACTGCCCTCCACATCGCATGC
ATGAGAGGACAGTGGGAGAGTGCGGTGACGCTGGTGAGGTCTCTCTCTGC
TGACGTGGACGCGGTGGACAACCACGGCCAGACTGCCCTCCACCTCTGCG
CGAGGTTTGCGCCAGAGCTGATGCACATCCTCATCAGCGCTGGCGCTTAC
CTCAATGCCAAGGACCTCATGGGCGAGGGAGAAACTCCTCTCCATTGCGC
CTGTGCTTACGCGGAAGCTCCCGACGCAATACGCCTCTTGCTCGAGAGCA
ACGCAGACATTGGAGCCGTCACTGTGGCTGGCCACACTCCCCTTCACGTG
GCCGTCAGGCAGAACAAACATCTCTGGAGCGTCTTCAGCAGTCCCCTCCA
CACGTGCGCTGCGTTCGGCCTCGCCAAGGCACTCCCGACGCTCGTGCGTA
ACTGTGGCGTAGACGTCGACTGTCGCATCCCTGGCAACCGTCGCACTGCC
CTCCACATCGCATGCATGAGAGGACAGTGGGAGAGTGCGGTGACGCTGGT
GAGGTCTCTCTCTGCTGACGTGGACGCGGTGGACAACCACGGCCAGACTG
CCCTCCACCTCTGCGCGAGGTTTGCGCCAGAGCTGATGCACATCCTCATC
AGCGCTGGCGCTTACCTCAATGCCAAGGACCTCATGGGCGAGGGAGAAAC
TCCTCTCCATTGCGCCTGTGCTTACGCGGAAGCTCCCGACGCAATACGCC
TCTTGCTCGAGAGCAACGCAGACATTGGAGCCGTCACTGTGGCTGGCCAC
ACTCCCCTTCACGTGGCCGTCAGGCAGAAC
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