mRNA_M-pyrifera_M_contig99304.22848.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig99304.22848.1
Unique NamemRNA_M-pyrifera_M_contig99304.22848.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig99304.22848.1 vs. uniprot
Match: M4BE66_HYAAE (T-complex protein 1 subunit alpha n=8 Tax=Oomycota TaxID=4762 RepID=M4BE66_HYAAE)

HSP 1 Score: 303 bits (776), Expect = 1.790e-97
Identity = 151/229 (65.94%), Postives = 193/229 (84.28%), Query Frame = 1 
Query:    1 IALLDFNLQRFRMAMGVGVLVKDSKRLEEVREQEVKITKARVDKILDAGANVVLTTKGIDDLCLKFLADRGVIGVRRCLKDDLKRIATATGGMLLPNLADLEGEESFDPAALGEAEQVSEERIGDGELIFFRGCKYEKAASIVLRGANEFHLEEVHRSLHDSLSVVRRVLESKSLVAGGGAVEVALSVHLDRFATTLGTREQLAVREFAEALTVIPKTLAVNAAKDATD 687
            IALLDF+LQR RM MGV V+V D   LE++R++EV ITK ++ K++DAGANV+LTTKGIDDLCLK+  + G +GVRRC K+DL+RIA ATGG ++  LAD+EGEE+FDP  LGEA++V EER+GDGELI+F+GCK  +A ++VLRGANE  L+E+ RS+HD+  VV+R+LES  LVAGGGAVE ALS++L+ FATTLG+REQLA+ EFA+AL VIPKTLAVNAAKDA++
Sbjct:  239 IALLDFDLQRHRMQMGVQVIVNDPNELEKIRQREVDITKEKIYKMIDAGANVILTTKGIDDLCLKYFVESGCMGVRRCKKEDLQRIAKATGGQVVLTLADMEGEETFDPLTLGEAQEVCEERVGDGELIYFKGCKTRQATTVVLRGANENMLDEMDRSMHDAFMVVKRMLESNQLVAGGGAVEAALSIYLENFATTLGSREQLAIAEFADALLVIPKTLAVNAAKDASE 467
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BLAST of mRNA_M-pyrifera_M_contig99304.22848.1 vs. uniprot
Match: A0A5A8C547_CAFRO (T-complex protein 1 subunit alpha n=4 Tax=Sar TaxID=2698737 RepID=A0A5A8C547_CAFRO)

HSP 1 Score: 302 bits (773), Expect = 4.910e-97
Identity = 150/229 (65.50%), Postives = 193/229 (84.28%), Query Frame = 1 
Query:    1 IALLDFNLQRFRMAMGVGVLVKDSKRLEEVREQEVKITKARVDKILDAGANVVLTTKGIDDLCLKFLADRGVIGVRRCLKDDLKRIATATGGMLLPNLADLEGEESFDPAALGEAEQVSEERIGDGELIFFRGCKYEKAASIVLRGANEFHLEEVHRSLHDSLSVVRRVLESKSLVAGGGAVEVALSVHLDRFATTLGTREQLAVREFAEALTVIPKTLAVNAAKDATD 687
            IA +DF LQ+ RM +GV ++V D K+LE +R++E+ ITK +++K++ AGANV+LTT+GIDDLC K+L D G IGVRR    D+KRIA ATG ++LPN+ADLEG ES DPA+LGEAE+V EER+GD EL+F RGCK  ++ S+VLRGANEF LEEVHRSLHD++ +V+RVLESKS+V GGGAVE AL++HL+ FA ++G+REQLA++EFAEAL VIPKTLAVNAAKD+TD
Sbjct:  233 IACIDFPLQKHRMQLGVQIVVTDPKKLEAIRQRELDITKEKIEKLISAGANVILTTRGIDDLCQKYLIDAGCIGVRRVSAGDIKRIAVATGAIVLPNIADLEGGESVDPASLGEAEEVVEERVGDHELLFVRGCKTARSTSLVLRGANEFMLEEVHRSLHDAMCIVKRVLESKSVVCGGGAVEAALAMHLEDFAMSMGSREQLAIKEFAEALLVIPKTLAVNAAKDSTD 461
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BLAST of mRNA_M-pyrifera_M_contig99304.22848.1 vs. uniprot
Match: H3G982_PHYRM (T-complex protein 1 subunit alpha n=23 Tax=Oomycota TaxID=4762 RepID=H3G982_PHYRM)

HSP 1 Score: 299 bits (766), Expect = 5.680e-96
Identity = 149/229 (65.07%), Postives = 191/229 (83.41%), Query Frame = 1 
Query:    1 IALLDFNLQRFRMAMGVGVLVKDSKRLEEVREQEVKITKARVDKILDAGANVVLTTKGIDDLCLKFLADRGVIGVRRCLKDDLKRIATATGGMLLPNLADLEGEESFDPAALGEAEQVSEERIGDGELIFFRGCKYEKAASIVLRGANEFHLEEVHRSLHDSLSVVRRVLESKSLVAGGGAVEVALSVHLDRFATTLGTREQLAVREFAEALTVIPKTLAVNAAKDATD 687
            IALLDF+LQR RM MGV V+V D   LE +R++E+ ITK ++ K++DAGANV+LTTKGIDDLCLK+  + G +GVRRC K+DL+RIA ATGG ++  LAD+EGEE+FDP  LGEA++V EER+GDGELI+ +GCK  +A ++VLRGANE  L+E+ RS+HD+  VV+R+LES  LVAGGGAVE ALS++L+ FATTLG+REQLA+ EFA+AL VIPKTLAVNAAKDA++
Sbjct:  239 IALLDFDLQRHRMQMGVQVVVNDPNELELIRQREIDITKEKIQKMIDAGANVILTTKGIDDLCLKYFVESGCMGVRRCKKEDLQRIAKATGGQVVLTLADMEGEETFDPLTLGEAQEVIEERVGDGELIYIKGCKTRQATTVVLRGANENMLDEMDRSMHDAFMVVKRMLESNQLVAGGGAVEAALSIYLENFATTLGSREQLAIAEFADALLVIPKTLAVNAAKDASE 467
[Close]
BLAST of mRNA_M-pyrifera_M_contig99304.22848.1 vs. uniprot
Match: A0A024TJ60_9STRA (T-complex protein 1 subunit alpha n=15 Tax=Eukaryota TaxID=2759 RepID=A0A024TJ60_9STRA)

HSP 1 Score: 296 bits (759), Expect = 5.890e-95
Identity = 149/229 (65.07%), Postives = 192/229 (83.84%), Query Frame = 1 
Query:    1 IALLDFNLQRFRMAMGVGVLVKDSKRLEEVREQEVKITKARVDKILDAGANVVLTTKGIDDLCLKFLADRGVIGVRRCLKDDLKRIATATGGMLLPNLADLEGEESFDPAALGEAEQVSEERIGDGELIFFRGCKYEKAASIVLRGANEFHLEEVHRSLHDSLSVVRRVLESKSLVAGGGAVEVALSVHLDRFATTLGTREQLAVREFAEALTVIPKTLAVNAAKDATD 687
            IALLDF+LQR +M MGV ++V D K L+++R++EV ITK R+ KILDAGANV+LTTKGIDDLC+K+  + G +GVRRC K+DL+RIA ATGG ++  LAD++G E+FD A+LG A +VSEER+GDGELI+ +GC   +A ++VLRGANE  L+E+ RSLHDSL VV+R+LES  LVAGGGAVE ALS++L+ +ATTLG+REQLA+ EFA+AL VIPKTLAVNAAKDA++
Sbjct:  236 IALLDFDLQRHKMQMGVQMVVNDPKELDQIRQREVDITKERIQKILDAGANVILTTKGIDDLCMKYFVEAGCMGVRRCKKEDLRRIAKATGGQVVLTLADMDGGETFDAASLGTAAEVSEERVGDGELIYIKGCANRQATTVVLRGANEMLLDEMDRSLHDSLMVVKRMLESNQLVAGGGAVESALSIYLETYATTLGSREQLAIAEFADALLVIPKTLAVNAAKDASE 464
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BLAST of mRNA_M-pyrifera_M_contig99304.22848.1 vs. uniprot
Match: A0A024G0Q1_9STRA (T-complex protein 1 subunit alpha n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024G0Q1_9STRA)

HSP 1 Score: 291 bits (746), Expect = 5.260e-93
Identity = 149/229 (65.07%), Postives = 189/229 (82.53%), Query Frame = 1 
Query:    1 IALLDFNLQRFRMAMGVGVLVKDSKRLEEVREQEVKITKARVDKILDAGANVVLTTKGIDDLCLKFLADRGVIGVRRCLKDDLKRIATATGGMLLPNLADLEGEESFDPAALGEAEQVSEERIGDGELIFFRGCKYEKAASIVLRGANEFHLEEVHRSLHDSLSVVRRVLESKSLVAGGGAVEVALSVHLDRFATTLGTREQLAVREFAEALTVIPKTLAVNAAKDATD 687
            IALLDF+LQR+R  MGV V+V D K LE++R++E+ ITK ++ KILDAGANV+LTTKGIDDLCLK+  +   +GVRR  K+DL RIA ATGG ++  LAD+EGEE+FDPA LGEAE VSEER+GDGELI+ +GCK  +A ++VLRGANE  L+E+ R+LHD+L VV+R+LES  LVAGGGAVE ALS++L+ +A TL +REQLA+ EFAEAL +IPKTLAVNAA+DA +
Sbjct:  237 IALLDFDLQRYRNQMGVQVVVTDPKELEQIRQREIDITKEKIQKILDAGANVLLTTKGIDDLCLKYFVEAKAMGVRRVKKEDLVRIARATGGQVVLTLADMEGEETFDPANLGEAEVVSEERVGDGELIYIKGCKTSRATTLVLRGANENMLDEMDRTLHDALMVVKRMLESNQLVAGGGAVECALSIYLENYANTLSSREQLAIVEFAEALLIIPKTLAVNAAQDAAE 465
[Close]
BLAST of mRNA_M-pyrifera_M_contig99304.22848.1 vs. uniprot
Match: A0A835YVW9_9STRA (T-complex protein 1 subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVW9_9STRA)

HSP 1 Score: 290 bits (743), Expect = 1.930e-92
Identity = 147/229 (64.19%), Postives = 190/229 (82.97%), Query Frame = 1 
Query:    1 IALLDFNLQRFRMAMGVGVLVKDSKRLEEVREQEVKITKARVDKILDAGANVVLTTKGIDDLCLKFLADRGVIGVRRCLKDDLKRIATATGGMLLPNLADLEGEESFDPAALGEAEQVSEERIGDGELIFFRGCKYEKAASIVLRGANEFHLEEVHRSLHDSLSVVRRVLESKSLVAGGGAVEVALSVHLDRFATTLGTREQLAVREFAEALTVIPKTLAVNAAKDATD 687
            IALLDFNLQR +M MGV V+VKD K ++ +R++E+ ITK R++KIL +GANVVLT+KGIDDLCLK+  +   + VRR   +DL+RIA ATG  ++  LAD+EG E+FDPA LGEAE+VSEER+GDGELIF +G + + + ++VLRGANE+ L+E+ R+LHDSL V++R+LE   LVAGGGAVEVALS++L+ FATTLG+REQLA+ EFAEAL VIPKTLAVNAA+DAT+
Sbjct:  233 IALLDFNLQRHKMQMGVEVVVKDMKEVDAIRQREMDITKERIEKILASGANVVLTSKGIDDLCLKYFVEAKAMAVRRVKPEDLRRIAKATGAKIVSTLADMEGNETFDPAVLGEAEEVSEERVGDGELIFVKGTRTQASCTVVLRGANEYMLDEMDRALHDSLMVIKRMLEGNVLVAGGGAVEVALSIYLENFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQDATE 461
[Close]
BLAST of mRNA_M-pyrifera_M_contig99304.22848.1 vs. uniprot
Match: A0A7S0CKV1_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CKV1_9STRA)

HSP 1 Score: 281 bits (719), Expect = 5.520e-92
Identity = 143/228 (62.72%), Postives = 185/228 (81.14%), Query Frame = 1 
Query:    4 ALLDFNLQRFRMAMGVGVLVKDSKRLEEVREQEVKITKARVDKILDAGANVVLTTKGIDDLCLKFLADRGVIGVRRCLKDDLKRIATATGGMLLPNLADLEGEESFDPAALGEAEQVSEERIGDGELIFFRGCKYEKAASIVLRGANEFHLEEVHRSLHDSLSVVRRVLESKSLVAGGGAVEVALSVHLDRFATTLGTREQLAVREFAEALTVIPKTLAVNAAKDATD 687
            A LD NLQR RMAMGV V+VKD + +E+ +++E+ ITK  + KILD G NVVLTTKG+DDLC+K+  + GV+  RRC ++DL+R+A ATGG L+  +AD+EG ESFD   +GEAE V EERIGDGE+I+  GCK   A++IVLRGANE+ L+E+ R+LHDSL VV+R+LES +LV GGGAVE ALSV+L+ +ATTL TREQLA++EFA+AL VIPKTLAVNAAKD+++
Sbjct:    2 AFLDMNLQRHRMAMGVQVIVKDPEEIEKFKQREIDITKEHIHKILDTGVNVVLTTKGVDDLCMKYFVEAGVLCARRCNREDLRRLAKATGGKLVTTMADMEGNESFDTTCIGEAESVREERIGDGEMIYTYGCK-GGASTIVLRGANEYMLDEMDRALHDSLCVVKRMLESNTLVVGGGAVEAALSVYLEGYATTLDTREQLAIQEFADALLVIPKTLAVNAAKDSSE 228
[Close]
BLAST of mRNA_M-pyrifera_M_contig99304.22848.1 vs. uniprot
Match: A0A7S2BQP8_9STRA (T-complex protein 1 subunit alpha n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BQP8_9STRA)

HSP 1 Score: 288 bits (738), Expect = 1.000e-91
Identity = 144/229 (62.88%), Postives = 191/229 (83.41%), Query Frame = 1 
Query:    1 IALLDFNLQRFRMAMGVGVLVKDSKRLEEVREQEVKITKARVDKILDAGANVVLTTKGIDDLCLKFLADRGVIGVRRCLKDDLKRIATATGGMLLPNLADLEGEESFDPAALGEAEQVSEERIGDGELIFFRGCKYEKAASIVLRGANEFHLEEVHRSLHDSLSVVRRVLESKSLVAGGGAVEVALSVHLDRFATTLGTREQLAVREFAEALTVIPKTLAVNAAKDATD 687
            IALLDF+L+R +M MGV V+V ++K +E +R++E  ITK R++KIL++GANV+LTTKGIDDLC+K+  +RG I +RR  K+D+KR+A ATGG ++  LAD+EG E+F+ + LG AE V EER+GDGELI+ RG   ++A ++VLRGAN++ L+E+ R+LHDSL V++RVLES S+VAGGGAVE ALS++LD FATTLG+REQLA+ EFAEAL VIPKTLAVNAA+DATD
Sbjct:  234 IALLDFDLKRHKMQMGVQVVVNEAKEVEGIRQREQDITKERIEKILESGANVILTTKGIDDLCMKYFVERGCIAIRRVKKEDIKRLARATGGTVVVTLADMEGNETFEASNLGTAETVQEERVGDGELIYLRGLPTQRAVTVVLRGANDYMLDEMDRALHDSLCVIKRVLESNSVVAGGGAVETALSIYLDDFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQDATD 462
[Close]
BLAST of mRNA_M-pyrifera_M_contig99304.22848.1 vs. uniprot
Match: A0A1Y3BLU7_EURMA (T-complex protein 1 subunit alpha-like protein n=1 Tax=Euroglyphus maynei TaxID=6958 RepID=A0A1Y3BLU7_EURMA)

HSP 1 Score: 280 bits (717), Expect = 2.250e-91
Identity = 144/229 (62.88%), Postives = 186/229 (81.22%), Query Frame = 1 
Query:    1 IALLDFNLQRFRMAMGVGVLVKDSKRLEEVREQEVKITKARVDKILDAGANVVLTTKGIDDLCLKFLADRGVIGVRRCLKDDLKRIATATGGMLLPNLADLEGEESFDPAALGEAEQVSEERIGDGELIFFRGCKYEKAASIVLRGANEFHLEEVHRSLHDSLSVVRRVLESKSLVAGGGAVEVALSVHLDRFATTLGTREQLAVREFAEALTVIPKTLAVNAAKDATD 687
            IA+LDF+LQ+ +M MGV +L+ D  +LE++R++E  ITK R+ KI+ AGANV+LTT GID+LC K+  + GV+ VRRC K DLKRIA ATGG L+ +LA++EGEE+F+ + LGEAE+V +ER+ D ELI  +G K   +ASI+LRGANEF L+E+ RSLHDSL  V+RVLESK +V GGGAVE ALSV+L+ FATT+G+REQLA+ EFA++L VIPKTLAVNAAKDATD
Sbjct:   10 IAMLDFSLQKTKMKMGVQMLISDPDKLEDMRKRECDITKERILKIISAGANVILTTGGIDELCQKYFLEAGVMAVRRCRKIDLKRIAKATGGQLISSLANMEGEETFEASMLGEAEEVVQERVSDDELIMVKGTKNHNSASIILRGANEFFLDEMERSLHDSLCAVKRVLESKKVVPGGGAVEAALSVYLENFATTIGSREQLAIAEFAKSLLVIPKTLAVNAAKDATD 238
[Close]
BLAST of mRNA_M-pyrifera_M_contig99304.22848.1 vs. uniprot
Match: A0A8J4ATE0_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4ATE0_9CHLO)

HSP 1 Score: 281 bits (719), Expect = 2.710e-91
Identity = 144/229 (62.88%), Postives = 182/229 (79.48%), Query Frame = 1 
Query:    1 IALLDFNLQRFRMAMGVGVLVKDSKRLEEVREQEVKITKARVDKILDAGANVVLTTKGIDDLCLKFLADRGVIGVRRCLKDDLKRIATATGGMLLPNLADLEGEESFDPAALGEAEQVSEERIGDGELIFFRGCKYEKAASIVLRGANEFHLEEVHRSLHDSLSVVRRVLESKSLVAGGGAVEVALSVHLDRFATTLGTREQLAVREFAEALTVIPKTLAVNAAKDATD 687
            IA LD NLQ+ RM MGV VLV D K LE++RE+E  ITK R+ KILDAGANV+LTTKGIDD+ LK+  + G I  RR  KDDL+RIA ATG  ++  LAD++G E+FDPA LG+AE V EER+ D  +I  +GCK+ KA +++LRGAN++ L+E+ RS+HDSL VV+RVLES ++V GGGAVE ALS++L+ FATTLG+REQLA+ EFA AL V+PKTLAVNAAKDAT+
Sbjct:   48 IACLDMNLQKARMMMGVQVLVNDPKELEKIRERESDITKERIQKILDAGANVILTTKGIDDMALKYFVEAGTIACRRVEKDDLRRIAKATGATVVLTLADMDGNETFDPAHLGQAEVVVEERVADDNMIMIKGCKFSKAVTLLLRGANDYMLDEMDRSIHDSLCVVKRVLESGNVVPGGGAVEAALSIYLENFATTLGSREQLAIGEFANALLVLPKTLAVNAAKDATE 276
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99304.22848.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
M4BE66_HYAAE1.790e-9765.94T-complex protein 1 subunit alpha n=8 Tax=Oomycota... [more]
A0A5A8C547_CAFRO4.910e-9765.50T-complex protein 1 subunit alpha n=4 Tax=Sar TaxI... [more]
H3G982_PHYRM5.680e-9665.07T-complex protein 1 subunit alpha n=23 Tax=Oomycot... [more]
A0A024TJ60_9STRA5.890e-9565.07T-complex protein 1 subunit alpha n=15 Tax=Eukaryo... [more]
A0A024G0Q1_9STRA5.260e-9365.07T-complex protein 1 subunit alpha n=2 Tax=Albugo c... [more]
A0A835YVW9_9STRA1.930e-9264.19T-complex protein 1 subunit alpha n=1 Tax=Tribonem... [more]
A0A7S0CKV1_9STRA5.520e-9262.72Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]
A0A7S2BQP8_9STRA1.000e-9162.88T-complex protein 1 subunit alpha n=1 Tax=Florenci... [more]
A0A1Y3BLU7_EURMA2.250e-9162.88T-complex protein 1 subunit alpha-like protein n=1... [more]
A0A8J4ATE0_9CHLO2.710e-9162.88Uncharacterized protein n=1 Tax=Volvox africanus T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99304contigM-pyrifera_M_contig99304:3..689 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score317.4
Seed ortholog evalue5.5e-84
Seed eggNOG ortholog115417.EPrPW00000019237
Preferred nameTCP1
KEGG koko:K09493
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000166,GO:0000228,GO:0000242,GO:0000785,GO:0000790,GO:0000792,GO:0001669,GO:0002064,GO:0002065,GO:0002066,GO:0002199,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005720,GO:0005737,GO:0005794,GO:0005813,GO:0005815,GO:0005829,GO:0005832,GO:0005856,GO:0005874,GO:0005886,GO:0006403,GO:0006457,GO:0006458,GO:0006810,GO:0007021,GO:0007154,GO:0007165,GO:0007166,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007292,GO:0007338,GO:0007339,GO:0008037,GO:0008104,GO:0008144,GO:0008150,GO:0009566,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009988,GO:0010033,GO:0010556,GO:0010557,GO:0010604,GO:0010638,GO:0010941,GO:0012505,GO:0015031,GO:0015630,GO:0015833,GO:0016020,GO:0016043,GO:0017076,GO:0019219,GO:0019221,GO:0019222,GO:0019899,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030141,GO:0030154,GO:0030554,GO:0030587,GO:0030707,GO:0030855,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031410,GO:0031625,GO:0031647,GO:0031974,GO:0031981,GO:0031982,GO:0032204,GO:0032206,GO:0032210,GO:0032212,GO:0032501,GO:0032502,GO:0032504,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032880,GO:0032991,GO:0033032,GO:0033036,GO:0033043,GO:0033044,GO:0034097,GO:0034622,GO:0035036,GO:0035639,GO:0035722,GO:0036094,GO:0042000,GO:0042221,GO:0042886,GO:0042981,GO:0043067,GO:0043085,GO:0043167,GO:0043168,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044053,GO:0044085,GO:0044093,GO:0044183,GO:0044297,GO:0044389,GO:0044403,GO:0044417,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044445,GO:0044446,GO:0044450,GO:0044454,GO:0044464,GO:0044703,GO:0044766,GO:0045184,GO:0045935,GO:0048232,GO:0048468,GO:0048477,GO:0048515,GO:0048518,GO:0048522,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050896,GO:0051052,GO:0051054,GO:0051082,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051338,GO:0051347,GO:0051701,GO:0051703,GO:0051704,GO:0051716,GO:0051808,GO:0051836,GO:0051972,GO:0051973,GO:0060255,GO:0060341,GO:0060429,GO:0061077,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070202,GO:0070203,GO:0070671,GO:0070887,GO:0071310,GO:0071345,GO:0071349,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0080090,GO:0090666,GO:0090670,GO:0090685,GO:0090702,GO:0097159,GO:0097223,GO:0097367,GO:0097708,GO:0099080,GO:0099081,GO:0099120,GO:0099503,GO:0099512,GO:0099513,GO:0101031,GO:1901265,GO:1901363,GO:1901998,GO:1902579,GO:1903827,GO:1903829,GO:1904356,GO:1904358,GO:1904814,GO:1904816,GO:1904851,GO:1904872,GO:1904874,GO:1904951,GO:2000106,GO:2000109,GO:2000112,GO:2000278,GO:2000573,GO:2001252
EggNOG free text desc.T-complex protein 1 subunit alpha
EggNOG OGs1MCE3@121069,COG0459@1,KOG0360@2759
COG Functional cat.O
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko03110,ko04147
Exons1
Model size687
Cds size687
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816910.6795158-CDS-M-pyrifera_M_contig99304:2..6891622816910.6795158-CDS-M-pyrifera_M_contig99304:2..689Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99304 3..689 +
1692278250.5311189-CDS-M-pyrifera_M_contig99304:2..6891692278250.5311189-CDS-M-pyrifera_M_contig99304:2..689Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99304 3..689 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99304.22848.1prot_M-pyrifera_M_contig99304.22848.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig99304 3..689 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig99304.22848.1

>prot_M-pyrifera_M_contig99304.22848.1 ID=prot_M-pyrifera_M_contig99304.22848.1|Name=mRNA_M-pyrifera_M_contig99304.22848.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=229bp
IALLDFNLQRFRMAMGVGVLVKDSKRLEEVREQEVKITKARVDKILDAGA
NVVLTTKGIDDLCLKFLADRGVIGVRRCLKDDLKRIATATGGMLLPNLAD
LEGEESFDPAALGEAEQVSEERIGDGELIFFRGCKYEKAASIVLRGANEF
HLEEVHRSLHDSLSVVRRVLESKSLVAGGGAVEVALSVHLDRFATTLGTR
EQLAVREFAEALTVIPKTLAVNAAKDATD
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mRNA from alignment at M-pyrifera_M_contig99304:3..689+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig99304.22848.1 ID=mRNA_M-pyrifera_M_contig99304.22848.1|Name=mRNA_M-pyrifera_M_contig99304.22848.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=687bp|location=Sequence derived from alignment at M-pyrifera_M_contig99304:3..689+ (Macrocystis pyrifera P11B4 male)
ATTGCGCTCTTGGATTTCAACTTGCAACGATTCCGAATGGCCATGGGGGT
GGGAGTGTTGGTGAAGGACTCGAAGCGACTGGAAGAAGTGCGAGAACAAG
AAGTGAAGATCACCAAGGCTCGTGTGGACAAGATCTTGGATGCTGGTGCC
AACGTGGTGCTCACCACCAAGGGCATTGATGATTTGTGTCTCAAATTCTT
GGCTGATCGTGGTGTCATTGGGGTGCGTCGTTGCTTGAAAGACGATTTGA
AGCGCATTGCAACTGCCACTGGTGGTATGCTGTTGCCAAACCTTGCAGAT
TTGGAAGGAGAAGAAAGCTTTGATCCCGCAGCTTTGGGTGAAGCTGAACA
AGTGTCTGAAGAACGCATTGGTGATGGAGAACTCATCTTCTTCCGTGGCT
GCAAGTACGAAAAAGCAGCTTCCATCGTCCTTCGTGGTGCCAACGAATTC
CATTTGGAAGAAGTGCATCGTTCCTTGCATGACAGTCTTTCTGTTGTGCG
TCGTGTACTCGAATCCAAGTCTCTCGTTGCTGGAGGAGGAGCTGTCGAAG
TTGCTCTCTCCGTCCACCTTGATCGATTTGCCACCACACTTGGCACACGA
GAACAACTTGCAGTGCGAGAATTTGCCGAAGCTCTCACTGTCATCCCAAA
GACTTTGGCAGTCAACGCAGCAAAGGATGCCACTGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig99304:3..689+

>mRNA_M-pyrifera_M_contig99304.22848.1 ID=mRNA_M-pyrifera_M_contig99304.22848.1|Name=mRNA_M-pyrifera_M_contig99304.22848.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1374bp|location=Sequence derived from alignment at M-pyrifera_M_contig99304:3..689+ (Macrocystis pyrifera P11B4 male)
ATTGCGCTCTTGGATTTCAACTTGCAACGATTCCGAATGGCCATGGGGGT
GGGAGTGTTGGTGAAGGACTCGAAGCGACTGGAAGAAGTGCGAGAACAAG
AAGTGAAGATCACCAAGGCTCGTGTGGACAAGATCTTGGATGCTGGTGCC
AACGTGGTGCTCACCACCAAGGGCATTGATGATTTGTGTCTCAAATTCTT
GGCTGATCGTGGTGTCATTGGGGTGCGTCGTTGCTTGAAAGACGATTTGA
AGCGCATTGCAACTGCCACTGGTGGTATGCTGTTGCCAAACCTTGCAGAT
TTGGAAGGAGAAGAAAGCTTTGATCCCGCAGCTTTGGGTGAAGCTGAACA
AGTGTCTGAAGAACGCATTGGTGATGGAGAACTCATCTTCTTCCGTGGCT
GCAAGTACGAAAAAGCAGCTTCCATCGTCCTTCGTGGTGCCAACGAATTC
CATTTGGAAGAAGTGCATCGTTCCTTGCATGACAGTCTTTCTGTTGTGCG
TCGTGTACTCGAATCCAAGTCTCTCGTTGCTGGAGGAGGAGCTGTCGAAG
TTGCTCTCTCCGTCCACCTTGATCGATTTGCCACCACACTTGGCACACGA
GAACAACTTGCAGTGCGAGAATTTGCCGAAGCTCTCACTGTCATCCCAAA
GACTTTGGCAGTCAACGCAGCAAAGGATGCCACTGACATTGCGCTCTTGG
ATTTCAACTTGCAACGATTCCGAATGGCCATGGGGGTGGGAGTGTTGGTG
AAGGACTCGAAGCGACTGGAAGAAGTGCGAGAACAAGAAGTGAAGATCAC
CAAGGCTCGTGTGGACAAGATCTTGGATGCTGGTGCCAACGTGGTGCTCA
CCACCAAGGGCATTGATGATTTGTGTCTCAAATTCTTGGCTGATCGTGGT
GTCATTGGGGTGCGTCGTTGCTTGAAAGACGATTTGAAGCGCATTGCAAC
TGCCACTGGTGGTATGCTGTTGCCAAACCTTGCAGATTTGGAAGGAGAAG
AAAGCTTTGATCCCGCAGCTTTGGGTGAAGCTGAACAAGTGTCTGAAGAA
CGCATTGGTGATGGAGAACTCATCTTCTTCCGTGGCTGCAAGTACGAAAA
AGCAGCTTCCATCGTCCTTCGTGGTGCCAACGAATTCCATTTGGAAGAAG
TGCATCGTTCCTTGCATGACAGTCTTTCTGTTGTGCGTCGTGTACTCGAA
TCCAAGTCTCTCGTTGCTGGAGGAGGAGCTGTCGAAGTTGCTCTCTCCGT
CCACCTTGATCGATTTGCCACCACACTTGGCACACGAGAACAACTTGCAG
TGCGAGAATTTGCCGAAGCTCTCACTGTCATCCCAAAGACTTTGGCAGTC
AACGCAGCAAAGGATGCCACTGAC
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