mRNA_M-pyrifera_M_contig99287.22842.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig99287.22842.1
Unique NamemRNA_M-pyrifera_M_contig99287.22842.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig99287.22842.1 vs. uniprot
Match: A0A6I6AJR4_9PLAN (Uncharacterized protein n=1 Tax=Gimesia benthica TaxID=2608982 RepID=A0A6I6AJR4_9PLAN)

HSP 1 Score: 471 bits (1211), Expect = 2.170e-156
Identity = 226/230 (98.26%), Postives = 228/230 (99.13%), Query Frame = 1 
Query:    1 HELGDYKPRNVALGTRGSNLLMLGKRMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGGDINRQLDAIWLGLNDPQFKVPTNPSVVEQFFTIAAGEPARIVRDVFTNPKETGGGYVPRAFAVGFDNGHNLLFDLDQFSLVQWTLGDLARQRTEGKSWYWDMAGTPIVTGYNRGFEFVLAKAGKEPLQVVYPHLENGSTGTLRSYDSQSNRITLNYELNFKIGDQIQTV 690
            HELGDYKPRNVALGTRGSNLLMLGKRMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGGDINRQLDAIWLGLNDPQFKVPTNPSVVEQFFT+AAGEPARIVRDVFTNPKETGGGYVPRAFAVGFDNGHN+LFDLDQFSLVQWTLGDLARQRTEGKSWYWDMAGTPIVTGYNRGFEFVLAKAGKEPLQVVYPHLENGS GTLRSYDSQ NRITLNYELNFKIGDQIQTV
Sbjct:  319 HELGDYKPRNVALGTRGSNLLMLGKRMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGGDINRQLDAIWLGLNDPQFKVPTNPSVVEQFFTVAAGEPARIVRDVFTNPKETGGGYVPRAFAVGFDNGHNMLFDLDQFSLVQWTLGDLARQRTEGKSWYWDMAGTPIVTGYNRGFEFVLAKAGKEPLQVVYPHLENGSAGTLRSYDSQGNRITLNYELNFKIGDQIQTV 548
[Close]
BLAST of mRNA_M-pyrifera_M_contig99287.22842.1 vs. uniprot
Match: A0A350K2W8_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350K2W8_9PLAN)

HSP 1 Score: 412 bits (1058), Expect = 1.120e-142
Identity = 196/230 (85.22%), Postives = 212/230 (92.17%), Query Frame = 1 
Query:    1 HELGDYKPRNVALGTRGSNLLMLGKRMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGGDINRQLDAIWLGLNDPQFKVPTNPSVVEQFFTIAAGEPARIVRDVFTNPKETGGGYVPRAFAVGFDNGHNLLFDLDQFSLVQWTLGDLARQRTEGKSWYWDMAGTPIVTGYNRGFEFVLAKAGKEPLQVVYPHLENGSTGTLRSYDSQSNRITLNYELNFKIGDQIQTV 690
            H LG Y+PRNVALGTRGS+LLMLG RMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGG+I+RQLDAIWLGLNDPQFKVPTNPSVVEQFFTIAAGEPARIVRDVFTNPKETGGGYV RAFAVGFDNGHNLL DLDQFS+VQWTLGDLARQRTEGKSWYWDMAG+PI++GY+RGFE+VL   GK+P   VYP L+NG  GTLRSY+SQ N++TLNYELNFKIG +  TV
Sbjct:   10 HVLGKYEPRNVALGTRGSDLLMLGDRMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGGNIDRQLDAIWLGLNDPQFKVPTNPSVVEQFFTIAAGEPARIVRDVFTNPKETGGGYVSRAFAVGFDNGHNLLIDLDQFSIVQWTLGDLARQRTEGKSWYWDMAGSPIISGYDRGFEYVLTPTGKKPAAAVYPLLQNGLAGTLRSYESQGNQVTLNYELNFKIGKKTTTV 239
[Close]
BLAST of mRNA_M-pyrifera_M_contig99287.22842.1 vs. uniprot
Match: A0A518AB25_9PLAN (Cytochrome c n=9 Tax=Gimesia TaxID=1649453 RepID=A0A518AB25_9PLAN)

HSP 1 Score: 440 bits (1132), Expect = 3.190e-142
Identity = 209/230 (90.87%), Postives = 222/230 (96.52%), Query Frame = 1 
Query:    1 HELGDYKPRNVALGTRGSNLLMLGKRMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGGDINRQLDAIWLGLNDPQFKVPTNPSVVEQFFTIAAGEPARIVRDVFTNPKETGGGYVPRAFAVGFDNGHNLLFDLDQFSLVQWTLGDLARQRTEGKSWYWDMAGTPIVTGYNRGFEFVLAKAGKEPLQVVYPHLENGSTGTLRSYDSQSNRITLNYELNFKIGDQIQTV 690
            HELGDYKPRNVALGTRGSNLLMLG+RMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGGDINRQLDAIWLGLNDP+FKVPTNPSVVEQFFTIAAG+PARIVRDVFTNPKETGGGYVPRAFAVGFDNG+NLLFDLDQFSLVQWTLGDLARQRTEGKSWYWDMAGTPI++ Y+RGFE VLA AGKEPL+VVYP+LENGS GT RSY+S  NRITL+YELNFK+GD+I TV
Sbjct:  622 HELGDYKPRNVALGTRGSNLLMLGQRMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGGDINRQLDAIWLGLNDPEFKVPTNPSVVEQFFTIAAGDPARIVRDVFTNPKETGGGYVPRAFAVGFDNGNNLLFDLDQFSLVQWTLGDLARQRTEGKSWYWDMAGTPIISSYDRGFELVLASAGKEPLKVVYPYLENGSAGTFRSYESHGNRITLHYELNFKVGDKIHTV 851
[Close]
BLAST of mRNA_M-pyrifera_M_contig99287.22842.1 vs. uniprot
Match: A0A518IHA8_9PLAN (Cytochrome c n=3 Tax=Gimesia TaxID=1649453 RepID=A0A518IHA8_9PLAN)

HSP 1 Score: 426 bits (1096), Expect = 5.140e-137
Identity = 200/230 (86.96%), Postives = 216/230 (93.91%), Query Frame = 1 
Query:    1 HELGDYKPRNVALGTRGSNLLMLGKRMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGGDINRQLDAIWLGLNDPQFKVPTNPSVVEQFFTIAAGEPARIVRDVFTNPKETGGGYVPRAFAVGFDNGHNLLFDLDQFSLVQWTLGDLARQRTEGKSWYWDMAGTPIVTGYNRGFEFVLAKAGKEPLQVVYPHLENGSTGTLRSYDSQSNRITLNYELNFKIGDQIQTV 690
            H LG+YKPRNVALGTRGS+LLMLG RMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGGDINRQLDAIWLGLNDPQFKVPTNPSVVEQFFTIA GEPARIVRDVFTNPKETGGGYVPRAFA+GFDNGHNLLFDLDQFS+VQWTLGDLARQRTEGKSWYWDMAG+PI++GY RG EF LAK GKEP  V+YPH++NG  GTLRSY+S  NRITLNYEL FK+G++++TV
Sbjct:  621 HVLGEYKPRNVALGTRGSDLLMLGNRMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGGDINRQLDAIWLGLNDPQFKVPTNPSVVEQFFTIAVGEPARIVRDVFTNPKETGGGYVPRAFAMGFDNGHNLLFDLDQFSIVQWTLGDLARQRTEGKSWYWDMAGSPIISGYERGQEFALAKTGKEPKSVIYPHVQNGRAGTLRSYESAGNRITLNYELTFKMGNKVRTV 850
[Close]
BLAST of mRNA_M-pyrifera_M_contig99287.22842.1 vs. uniprot
Match: A0A2D5GYM6_9PLAN (Uncharacterized protein (Fragment) n=2 Tax=Gimesia TaxID=1649453 RepID=A0A2D5GYM6_9PLAN)

HSP 1 Score: 414 bits (1064), Expect = 7.180e-137
Identity = 196/230 (85.22%), Postives = 214/230 (93.04%), Query Frame = 1 
Query:    1 HELGDYKPRNVALGTRGSNLLMLGKRMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGGDINRQLDAIWLGLNDPQFKVPTNPSVVEQFFTIAAGEPARIVRDVFTNPKETGGGYVPRAFAVGFDNGHNLLFDLDQFSLVQWTLGDLARQRTEGKSWYWDMAGTPIVTGYNRGFEFVLAKAGKEPLQVVYPHLENGSTGTLRSYDSQSNRITLNYELNFKIGDQIQTV 690
            H LG+Y+PRNVALGTRGS+LLMLG RMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGG+I+RQLDAIWLGLNDPQFKVPTNPSVVEQFFTIAAGEPARIVRDVFTNPKETGGGYV RAFAVGFDNGHNLL DLDQFS+VQWTLGDLARQRTEGKSWYWDMAG+PI++GY+RGFE+VL   GK+P   VYP L+NG  GTLRSY+SQ N++TLNYELNFKIG++  TV
Sbjct:   89 HVLGEYEPRNVALGTRGSDLLMLGDRMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGGNIDRQLDAIWLGLNDPQFKVPTNPSVVEQFFTIAAGEPARIVRDVFTNPKETGGGYVSRAFAVGFDNGHNLLIDLDQFSIVQWTLGDLARQRTEGKSWYWDMAGSPIISGYDRGFEYVLTPTGKKPAAAVYPLLQNGLAGTLRSYESQGNQVTLNYELNFKIGEKTTTV 318
[Close]
BLAST of mRNA_M-pyrifera_M_contig99287.22842.1 vs. uniprot
Match: A0A355GGT7_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A355GGT7_9PLAN)

HSP 1 Score: 412 bits (1058), Expect = 5.560e-135
Identity = 192/230 (83.48%), Postives = 212/230 (92.17%), Query Frame = 1 
Query:    1 HELGDYKPRNVALGTRGSNLLMLGKRMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGGDINRQLDAIWLGLNDPQFKVPTNPSVVEQFFTIAAGEPARIVRDVFTNPKETGGGYVPRAFAVGFDNGHNLLFDLDQFSLVQWTLGDLARQRTEGKSWYWDMAGTPIVTGYNRGFEFVLAKAGKEPLQVVYPHLENGSTGTLRSYDSQSNRITLNYELNFKIGDQIQTV 690
            H LG+Y+PRNVALGTRGS+LLMLG RMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVL GDI+RQLDAIWLGLNDPQFKVPTNPSVVEQFFT+AAGEPARIVRDVFTNPKETGGGYV RAFAVGFDNGHNLLFDLDQF++VQWT+GDLA QRTEGKSWYWDMAG+PI++GY RGFEF+L   GK+P   +YP L+NG  GTLRSY+SQ N+++LNYELNFKIGD+  TV
Sbjct:  621 HVLGEYEPRNVALGTRGSDLLMLGDRMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLEGDIDRQLDAIWLGLNDPQFKVPTNPSVVEQFFTVAAGEPARIVRDVFTNPKETGGGYVSRAFAVGFDNGHNLLFDLDQFAIVQWTMGDLAHQRTEGKSWYWDMAGSPIISGYERGFEFMLTPTGKQPTAAIYPQLQNGLAGTLRSYESQGNQVSLNYELNFKIGDKTTTV 850
[Close]
BLAST of mRNA_M-pyrifera_M_contig99287.22842.1 vs. uniprot
Match: A0A517VT53_9PLAN (Cytochrome c n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VT53_9PLAN)

HSP 1 Score: 418 bits (1075), Expect = 5.670e-134
Identity = 198/230 (86.09%), Postives = 211/230 (91.74%), Query Frame = 1 
Query:    1 HELGDYKPRNVALGTRGSNLLMLGKRMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGGDINRQLDAIWLGLNDPQFKVPTNPSVVEQFFTIAAGEPARIVRDVFTNPKETGGGYVPRAFAVGFDNGHNLLFDLDQFSLVQWTLGDLARQRTEGKSWYWDMAGTPIVTGYNRGFEFVLAKAGKEPLQVVYPHLENGSTGTLRSYDSQSNRITLNYELNFKIGDQIQTV 690
            H LGDYKPRNVALGTRGS+LLMLGKRMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGGDINRQLDAIWLGLNDPQFKVPTNPSVVEQF T+AAGEPARIVRDVFTNPKETGGGYV RAFA+GFDNGHNLL DLD+FSLVQWTLGDLARQRTEGKSWYWDMAG+PIV+GY RG +F L K+GKEP+ V+YPHL+NG  G LRSY S  N+ITLNYEL FK+ DQ  TV
Sbjct:  621 HVLGDYKPRNVALGTRGSDLLMLGKRMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGGDINRQLDAIWLGLNDPQFKVPTNPSVVEQFLTVAAGEPARIVRDVFTNPKETGGGYVARAFAIGFDNGHNLLIDLDRFSLVQWTLGDLARQRTEGKSWYWDMAGSPIVSGYERGNDFALVKSGKEPMSVIYPHLQNGLAGALRSYHSDGNQITLNYELTFKVNDQKTTV 850
[Close]
BLAST of mRNA_M-pyrifera_M_contig99287.22842.1 vs. uniprot
Match: UPI0018AFFD55 (c-type cytochrome n=1 Tax=Gimesia maris TaxID=122 RepID=UPI0018AFFD55)

HSP 1 Score: 414 bits (1064), Expect = 8.120e-133
Identity = 197/230 (85.65%), Postives = 212/230 (92.17%), Query Frame = 1 
Query:    1 HELGDYKPRNVALGTRGSNLLMLGKRMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGGDINRQLDAIWLGLNDPQFKVPTNPSVVEQFFTIAAGEPARIVRDVFTNPKETGGGYVPRAFAVGFDNGHNLLFDLDQFSLVQWTLGDLARQRTEGKSWYWDMAGTPIVTGYNRGFEFVLAKAGKEPLQVVYPHLENGSTGTLRSYDSQSNRITLNYELNFKIGDQIQTV 690
            H LG Y+PRNVALGTRGS+LLMLG RMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGG+I+RQLDAIWLGLNDPQFKVPTNPSVVEQFFTIAAGEPARIVRDVFTNPKETGGGYV RAFAVGFDNGHNLL DLDQFS+VQWTLGDLARQRTEGKSWYWDMAG+PI++GY RGFE+VL   GK+P   VYP L+NG  GTLRSY+SQ N++TLNYELNFKIG+Q  TV
Sbjct:  604 HVLGKYEPRNVALGTRGSDLLMLGDRMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGGNIDRQLDAIWLGLNDPQFKVPTNPSVVEQFFTIAAGEPARIVRDVFTNPKETGGGYVSRAFAVGFDNGHNLLIDLDQFSIVQWTLGDLARQRTEGKSWYWDMAGSPIISGYERGFEYVLTPTGKKPAAAVYPLLQNGLAGTLRSYESQGNQVTLNYELNFKIGEQTTTV 833
[Close]
BLAST of mRNA_M-pyrifera_M_contig99287.22842.1 vs. uniprot
Match: A6BZH4_9PLAN (Putative large multi-functional protein n=11 Tax=Planctomycetaceae TaxID=126 RepID=A6BZH4_9PLAN)

HSP 1 Score: 414 bits (1064), Expect = 2.200e-132
Identity = 197/230 (85.65%), Postives = 212/230 (92.17%), Query Frame = 1 
Query:    1 HELGDYKPRNVALGTRGSNLLMLGKRMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGGDINRQLDAIWLGLNDPQFKVPTNPSVVEQFFTIAAGEPARIVRDVFTNPKETGGGYVPRAFAVGFDNGHNLLFDLDQFSLVQWTLGDLARQRTEGKSWYWDMAGTPIVTGYNRGFEFVLAKAGKEPLQVVYPHLENGSTGTLRSYDSQSNRITLNYELNFKIGDQIQTV 690
            H LG Y+PRNVALGTRGS+LLMLG RMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGG+I+RQLDAIWLGLNDPQFKVPTNPSVVEQFFTIAAGEPARIVRDVFTNPKETGGGYV RAFAVGFDNGHNLL DLDQFS+VQWTLGDLARQRTEGKSWYWDMAG+PI++GY RGFE+VL   GK+P   VYP L+NG  GTLRSY+SQ N++TLNYELNFKIG+Q  TV
Sbjct:  621 HVLGKYEPRNVALGTRGSDLLMLGDRMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGGNIDRQLDAIWLGLNDPQFKVPTNPSVVEQFFTIAAGEPARIVRDVFTNPKETGGGYVSRAFAVGFDNGHNLLIDLDQFSIVQWTLGDLARQRTEGKSWYWDMAGSPIISGYERGFEYVLTPTGKKPAAAVYPLLQNGLAGTLRSYESQGNQVTLNYELNFKIGEQTTTV 850
[Close]
BLAST of mRNA_M-pyrifera_M_contig99287.22842.1 vs. uniprot
Match: A0A517ZWU5_9PLAN (Cytochrome c n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZWU5_9PLAN)

HSP 1 Score: 263 bits (672), Expect = 2.140e-77
Identity = 130/221 (58.82%), Postives = 154/221 (69.68%), Query Frame = 1 
Query:    1 HELGDYKPRNVALGTRGSNLLMLGKRMRKEYFLRWVHNPLRIVPGMEMPALKKSVPKVLGGDINRQLDAIWLGLNDPQFKVPTNPSVVEQFFTIAAGEPARIVRDVFTNPKETGGGYVPRAFAVGFDNGHNLLFDLDQFSLVQWTLGDLARQRTEGKSWYWDMAGTPIVTGYNRGFEFVLAKAGKEPLQVVYPHLENGSTGTLRSYDSQSNRITLNYELNF 663
            H  G ++PRNVALGTRGS+LLMLG+RMR+EYFLRW  +PLRIVPGMEMP+  K VPK+L G+ +RQL AIW GLNDP F VPTNPSVVEQ+  +   EP RIVRDVFTN K  GG Y PR+FAVG  N HN+ +DLD FSL QW LGD ARQRT+GKSW+WD AG  I  G     +  L   G     ++ P  + G+ G L  Y + SN + L Y LNF
Sbjct:  594 HAFGKFEPRNVALGTRGSDLLMLGQRMRREYFLRWTRSPLRIVPGMEMPSFDKPVPKILAGNHDRQLAAIWDGLNDPNFTVPTNPSVVEQYLVVRPDEPPRIVRDVFTNHKADGG-YTPRSFAVGLPNRHNVFYDLDTFSLRQWWLGDFARQRTQGKSWFWDAAGVTIAVGTPNAPDIALHADGTAADALLIPTRDQGTHGRLVGYHTDSNGVQLEYVLNF 813
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99287.22842.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I6AJR4_9PLAN2.170e-15698.26Uncharacterized protein n=1 Tax=Gimesia benthica T... [more]
A0A350K2W8_9PLAN1.120e-14285.22Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]
A0A518AB25_9PLAN3.190e-14290.87Cytochrome c n=9 Tax=Gimesia TaxID=1649453 RepID=A... [more]
A0A518IHA8_9PLAN5.140e-13786.96Cytochrome c n=3 Tax=Gimesia TaxID=1649453 RepID=A... [more]
A0A2D5GYM6_9PLAN7.180e-13785.22Uncharacterized protein (Fragment) n=2 Tax=Gimesia... [more]
A0A355GGT7_9PLAN5.560e-13583.48Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]
A0A517VT53_9PLAN5.670e-13486.09Cytochrome c n=2 Tax=Gimesia aquarii TaxID=2527964... [more]
UPI0018AFFD558.120e-13385.65c-type cytochrome n=1 Tax=Gimesia maris TaxID=122 ... [more]
A6BZH4_9PLAN2.200e-13285.65Putative large multi-functional protein n=11 Tax=P... [more]
A0A517ZWU5_9PLAN2.140e-7758.82Cytochrome c n=3 Tax=Symmachiella TaxID=2795780 Re... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99287contigM-pyrifera_M_contig99287:2..691 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score417.9
Seed ortholog evalue3e-114
Seed eggNOG ortholog344747.PM8797T_21348
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Cytochrome c
EggNOG OGs2IYNN@203682,COG2010@1,COG2010@2,COG2133@1,COG2133@2
COG Functional cat.C
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size690
Cds size690
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816910.392001-CDS-M-pyrifera_M_contig99287:1..6911622816910.392001-CDS-M-pyrifera_M_contig99287:1..691Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99287 2..691 +
1692278250.3797011-CDS-M-pyrifera_M_contig99287:1..6911692278250.3797011-CDS-M-pyrifera_M_contig99287:1..691Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99287 2..691 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99287.22842.1prot_M-pyrifera_M_contig99287.22842.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig99287 2..691 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig99287.22842.1

>prot_M-pyrifera_M_contig99287.22842.1 ID=prot_M-pyrifera_M_contig99287.22842.1|Name=mRNA_M-pyrifera_M_contig99287.22842.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=230bp
HELGDYKPRNVALGTRGSNLLMLGKRMRKEYFLRWVHNPLRIVPGMEMPA
LKKSVPKVLGGDINRQLDAIWLGLNDPQFKVPTNPSVVEQFFTIAAGEPA
RIVRDVFTNPKETGGGYVPRAFAVGFDNGHNLLFDLDQFSLVQWTLGDLA
RQRTEGKSWYWDMAGTPIVTGYNRGFEFVLAKAGKEPLQVVYPHLENGST
GTLRSYDSQSNRITLNYELNFKIGDQIQTV
back to top

mRNA from alignment at M-pyrifera_M_contig99287:2..691+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig99287.22842.1 ID=mRNA_M-pyrifera_M_contig99287.22842.1|Name=mRNA_M-pyrifera_M_contig99287.22842.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=690bp|location=Sequence derived from alignment at M-pyrifera_M_contig99287:2..691+ (Macrocystis pyrifera P11B4 male)
CACGAACTGGGCGACTACAAACCCCGCAACGTGGCCTTGGGAACCCGCGG
TTCAAACCTGCTCATGCTGGGTAAACGCATGCGGAAAGAATACTTCCTCC
GCTGGGTTCACAACCCGCTGCGAATCGTCCCTGGCATGGAAATGCCCGCC
CTCAAGAAGAGCGTCCCCAAAGTCCTGGGAGGCGACATCAACCGTCAGCT
GGATGCCATCTGGCTTGGCCTGAATGATCCTCAATTCAAAGTGCCCACGA
ACCCCTCCGTCGTGGAACAGTTCTTTACTATCGCTGCCGGCGAACCCGCG
CGGATCGTCCGCGATGTCTTCACCAATCCCAAAGAGACCGGCGGCGGATA
CGTGCCTCGCGCCTTCGCAGTCGGCTTTGACAACGGGCATAACCTTCTGT
TCGACCTCGATCAGTTCTCCCTCGTCCAGTGGACGCTCGGCGATCTGGCC
CGCCAGCGCACCGAAGGCAAAAGCTGGTACTGGGACATGGCGGGCACACC
GATTGTCACCGGCTACAACCGCGGATTCGAATTCGTCCTCGCCAAAGCCG
GCAAGGAACCGCTGCAGGTCGTCTACCCGCATCTCGAAAACGGCAGTACC
GGCACCCTCCGCAGCTATGACTCGCAGAGCAACCGGATCACGCTCAACTA
TGAACTCAATTTCAAAATCGGTGACCAGATCCAGACGGTC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig99287:2..691+

>mRNA_M-pyrifera_M_contig99287.22842.1 ID=mRNA_M-pyrifera_M_contig99287.22842.1|Name=mRNA_M-pyrifera_M_contig99287.22842.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1380bp|location=Sequence derived from alignment at M-pyrifera_M_contig99287:2..691+ (Macrocystis pyrifera P11B4 male)
CACGAACTGGGCGACTACAAACCCCGCAACGTGGCCTTGGGAACCCGCGG
TTCAAACCTGCTCATGCTGGGTAAACGCATGCGGAAAGAATACTTCCTCC
GCTGGGTTCACAACCCGCTGCGAATCGTCCCTGGCATGGAAATGCCCGCC
CTCAAGAAGAGCGTCCCCAAAGTCCTGGGAGGCGACATCAACCGTCAGCT
GGATGCCATCTGGCTTGGCCTGAATGATCCTCAATTCAAAGTGCCCACGA
ACCCCTCCGTCGTGGAACAGTTCTTTACTATCGCTGCCGGCGAACCCGCG
CGGATCGTCCGCGATGTCTTCACCAATCCCAAAGAGACCGGCGGCGGATA
CGTGCCTCGCGCCTTCGCAGTCGGCTTTGACAACGGGCATAACCTTCTGT
TCGACCTCGATCAGTTCTCCCTCGTCCAGTGGACGCTCGGCGATCTGGCC
CGCCAGCGCACCGAAGGCAAAAGCTGGTACTGGGACATGGCGGGCACACC
GATTGTCACCGGCTACAACCGCGGATTCGAATTCGTCCTCGCCAAAGCCG
GCAAGGAACCGCTGCAGGTCGTCTACCCGCATCTCGAAAACGGCAGTACC
GGCACCCTCCGCAGCTATGACTCGCAGAGCAACCGGATCACGCTCAACTA
TGAACTCAATTTCAAAATCGGTGACCAGATCCAGACGGTCCACGAACTGG
GCGACTACAAACCCCGCAACGTGGCCTTGGGAACCCGCGGTTCAAACCTG
CTCATGCTGGGTAAACGCATGCGGAAAGAATACTTCCTCCGCTGGGTTCA
CAACCCGCTGCGAATCGTCCCTGGCATGGAAATGCCCGCCCTCAAGAAGA
GCGTCCCCAAAGTCCTGGGAGGCGACATCAACCGTCAGCTGGATGCCATC
TGGCTTGGCCTGAATGATCCTCAATTCAAAGTGCCCACGAACCCCTCCGT
CGTGGAACAGTTCTTTACTATCGCTGCCGGCGAACCCGCGCGGATCGTCC
GCGATGTCTTCACCAATCCCAAAGAGACCGGCGGCGGATACGTGCCTCGC
GCCTTCGCAGTCGGCTTTGACAACGGGCATAACCTTCTGTTCGACCTCGA
TCAGTTCTCCCTCGTCCAGTGGACGCTCGGCGATCTGGCCCGCCAGCGCA
CCGAAGGCAAAAGCTGGTACTGGGACATGGCGGGCACACCGATTGTCACC
GGCTACAACCGCGGATTCGAATTCGTCCTCGCCAAAGCCGGCAAGGAACC
GCTGCAGGTCGTCTACCCGCATCTCGAAAACGGCAGTACCGGCACCCTCC
GCAGCTATGACTCGCAGAGCAACCGGATCACGCTCAACTATGAACTCAAT
TTCAAAATCGGTGACCAGATCCAGACGGTC
back to top