mRNA_M-pyrifera_M_contig9927.22838.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig9927.22838.1 vs. uniprot
Match: D8LHH2_ECTSI (CPLD51 protein required for cyt b6 assembly n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHH2_ECTSI) HSP 1 Score: 166 bits (421), Expect = 1.270e-48 Identity = 92/118 (77.97%), Postives = 99/118 (83.90%), Query Frame = 1 Query: 1 MVSPVELADAAVAVHHSASSALPSFLLGDEEI-----SVGYSKFSYYTTLGLYVLSFPGLWSVVKRATKTKWV-RLYEIPGPASTEAGAESVKQTAAKIIAYFQANNYKILEAGEEIT 336 +V+P E+ DAAVA HH+ S ALPSFLL DE + SVGYSKFSYYTTLGLYVLSFPGLWSVVKRATKTK+ YE+PGPASTE GAESVKQTAAKIIAYFQANNYKI EAGE IT Sbjct: 76 VVAPHEVVDAAVAAHHAVS-ALPSFLLSDEAVAEAAGSVGYSKFSYYTTLGLYVLSFPGLWSVVKRATKTKYKDATYELPGPASTEKGAESVKQTAAKIIAYFQANNYKIKEAGETIT 192
BLAST of mRNA_M-pyrifera_M_contig9927.22838.1 vs. uniprot
Match: A0A835YMB8_9STRA (CPLD51 protein required for cyt b6 assembly n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMB8_9STRA) HSP 1 Score: 107 bits (268), Expect = 2.630e-26 Identity = 55/81 (67.90%), Postives = 66/81 (81.48%), Query Frame = 1 Query: 97 SVGYSKFSYYTTLGLYVLSFPGLWSVVKRATKTKWV-RLYEIPGPASTEAGAESVKQTAAKIIAYFQANNYKILEAGEEIT 336 SV YSK SYY TLGLY+LSFPGLWSV+KRA KTK+ R+Y + GPA+ A A+ VKQ AA+++AYFQANNYKI+ AGEEI Sbjct: 86 SVSYSKSSYYATLGLYLLSFPGLWSVIKRAAKTKYKERVYTVAGPAAAVA-AKPVKQVAAEVVAYFQANNYKIVSAGEEIV 165
BLAST of mRNA_M-pyrifera_M_contig9927.22838.1 vs. uniprot
Match: A0A7S4HKN9_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HKN9_9EUKA) HSP 1 Score: 89.7 bits (221), Expect = 7.360e-20 Identity = 53/99 (53.54%), Postives = 69/99 (69.70%), Query Frame = 1 Query: 52 ASSALPSFLLGDEEISV---GYSKFSYYTTLGLYVLSFPGLWSVVKRATKTKWVR-LYEIPGPASTEAGAESVKQTAAKIIAYFQANNYKILEAGEEIT 336 AS+ L +F D+ +S+ GYS S+Y TL LYVLSFPGL+S+V R+ K+K VR YE+ GPAST G V++TA I+AYFQANNYKI +A + I Sbjct: 4 ASAPLAAF--ADDAVSISENGYSSVSFYFTLVLYVLSFPGLYSLVTRSVKSKVVRKTYEVAGPAST--GGRPVRETAGDIVAYFQANNYKIADASDVIV 98
BLAST of mRNA_M-pyrifera_M_contig9927.22838.1 vs. uniprot
Match: A0A7S2XLP2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XLP2_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 2.460e-18 Identity = 53/109 (48.62%), Postives = 71/109 (65.14%), Query Frame = 1 Query: 19 LADAAVAVHHSASSALPSFLLGDEEIS---VGYSKFSYYTTLGLYVLSFPGLWSVVKRATKTKWVRLYEIPGPASTEAGAESVKQTAAKIIAYFQANNYKILEAGEEIT 336 L+DAA + +SSA + +GD S V YSK SYYTTLGLY LSFPGLWS +KR+T K R + + E G + ++Q A +I+AY +ANNY+++EAGE IT Sbjct: 18 LSDAAADLADPSSSAPVN--VGDAGFSTDPVTYSKASYYTTLGLYALSFPGLWSQIKRSTAAKTKRKTFVSSGEAVE-GGKDLRQQAGEIMAYMKANNYEVVEAGETIT 123
BLAST of mRNA_M-pyrifera_M_contig9927.22838.1 vs. uniprot
Match: A0A7S2BPD7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2BPD7_9EUKA) HSP 1 Score: 83.2 bits (204), Expect = 4.290e-18 Identity = 43/78 (55.13%), Postives = 58/78 (74.36%), Query Frame = 1 Query: 103 GYSKFSYYTTLGLYVLSFPGLWSVVKRATKTKWVR-LYEIPGPASTEAGAESVKQTAAKIIAYFQANNYKILEAGEEI 333 G+S+ SYYTTL LYV+SFPG++S+VKR+ K+K VR YE+ GPAS G ++ A I+A+FQANNYKI +A + I Sbjct: 62 GFSQASYYTTLALYVVSFPGVYSLVKRSVKSKIVRKTYEVAGPASD--GGRPTRELAGDIVAFFQANNYKITDATDTI 137
BLAST of mRNA_M-pyrifera_M_contig9927.22838.1 vs. uniprot
Match: A0A7S3XQU3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQU3_HETAK) HSP 1 Score: 87.0 bits (214), Expect = 4.370e-18 Identity = 49/103 (47.57%), Postives = 66/103 (64.08%), Query Frame = 1 Query: 88 EEISVGYSKFSYYTTLGLYVLSFPGLWSVVKRATKTKWVR-LYEIPGPASTEAGAESVKQTAAK-------------------IIAYFQANNYKILEAGEEIT 336 EE + YSK SYYTTLGLYV+SFPGL+S+VKR+ K V+ YE+PGP S + GA+ +KQ AA+ ++AYF+A NY+I+ AGE I+ Sbjct: 75 EEATTSYSKASYYTTLGLYVISFPGLYSLVKRSVKASNVKKTYELPGP-SADTGAKEMKQIAAEAVREAYLPIIEAAAKQLKQVVAYFRAQNYEIVNAGETIS 176
BLAST of mRNA_M-pyrifera_M_contig9927.22838.1 vs. uniprot
Match: A0A7S3EZW5_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EZW5_9EUKA) HSP 1 Score: 85.9 bits (211), Expect = 4.840e-18 Identity = 44/79 (55.70%), Postives = 59/79 (74.68%), Query Frame = 1 Query: 103 GYSKFSYYTTLGLYVLSFPGLWSVVKRATKTKWVR-LYEIPGPASTEAGAESVKQTAAKIIAYFQANNYKILEAGEEIT 336 G+S+ SYYTTL LYVLSFPG++S+VKR+ K+K VR YE+ GPA+ E A ++ A I+A+FQANNYKI +A + I Sbjct: 68 GFSQVSYYTTLALYVLSFPGIYSLVKRSVKSKVVRKTYEVAGPAAAEGRA--TREVAGDIVAFFQANNYKIADASDVIV 144
BLAST of mRNA_M-pyrifera_M_contig9927.22838.1 vs. uniprot
Match: A0A7R9ZEM2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZEM2_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 1.280e-17 Identity = 41/77 (53.25%), Postives = 57/77 (74.03%), Query Frame = 1 Query: 106 YSKFSYYTTLGLYVLSFPGLWSVVKRATKTKWVRLYEIPGPASTEAGAESVKQTAAKIIAYFQANNYKILEAGEEIT 336 YSK+S+YTTLG+YV+SFPGLWS +KR+TK K R + + E G + ++Q A +I+AY +ANNY++ EAGE IT Sbjct: 26 YSKWSFYTTLGVYVMSFPGLWSQIKRSTKAKVKRKTYVSDGENAE-GGKDMRQQAGEIMAYMKANNYEVEEAGETIT 101
BLAST of mRNA_M-pyrifera_M_contig9927.22838.1 vs. uniprot
Match: A0A1Z5K036_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K036_FISSO) HSP 1 Score: 84.0 bits (206), Expect = 2.650e-17 Identity = 48/95 (50.53%), Postives = 64/95 (67.37%), Query Frame = 1 Query: 55 SSALPSFLLGDEEIS-VGYSKFSYYTTLGLYVLSFPGLWSVVKRATKTKWVRLYEIPGPASTEAGAESVKQTAAKIIAYFQANNYKILEAGEEIT 336 SS L S + G E+ V YSK SYYT LGLYVLSFPG+WS VKR+T K R + + AG +S++Q A +I+AY +NNY++++AGE IT Sbjct: 52 SSLLLSAVEGPPEVGGVSYSKASYYTILGLYVLSFPGVWSQVKRSTSAKIKRKTFVTAGENAAAG-KSLRQQAGEIMAYMTSNNYEVVDAGETIT 145
BLAST of mRNA_M-pyrifera_M_contig9927.22838.1 vs. uniprot
Match: A0A7R9XVV1_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9XVV1_9VIRI) HSP 1 Score: 82.8 bits (203), Expect = 4.670e-17 Identity = 43/80 (53.75%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 103 GYSKFSYYTTLGLYVLSFPGLWSVVKRATKTKWV-RLYEIPGPASTEA-GAESVKQTAAKIIAYFQANNYKILEAGEEIT 336 GY+K SYYTTLGLY+ S PGL+S+VKR+TK K V + Y +PGPA TEA G + + A ++ +F NNY I +AGE +T Sbjct: 42 GYAKSSYYTTLGLYLFSLPGLYSLVKRSTKAKVVQKTYAVPGPAVTEAEGGKPLDALAREVSTFFIRNNYNITDAGEIVT 121 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9927.22838.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9927.22838.1 >prot_M-pyrifera_M_contig9927.22838.1 ID=prot_M-pyrifera_M_contig9927.22838.1|Name=mRNA_M-pyrifera_M_contig9927.22838.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=113bp MVSPVELADAAVAVHHSASSALPSFLLGDEEISVGYSKFSYYTTLGLYVLback to top mRNA from alignment at M-pyrifera_M_contig9927:9368..10544+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig9927.22838.1 ID=mRNA_M-pyrifera_M_contig9927.22838.1|Name=mRNA_M-pyrifera_M_contig9927.22838.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1177bp|location=Sequence derived from alignment at M-pyrifera_M_contig9927:9368..10544+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig9927:9368..10544+ >mRNA_M-pyrifera_M_contig9927.22838.1 ID=mRNA_M-pyrifera_M_contig9927.22838.1|Name=mRNA_M-pyrifera_M_contig9927.22838.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=678bp|location=Sequence derived from alignment at M-pyrifera_M_contig9927:9368..10544+ (Macrocystis pyrifera P11B4 male)back to top |