mRNA_M-pyrifera_M_contig99104.22804.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig99104.22804.1 vs. uniprot
Match: A0A7X5WNP2_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WNP2_9ACTN) HSP 1 Score: 170 bits (430), Expect = 3.650e-47 Identity = 99/136 (72.79%), Postives = 108/136 (79.41%), Query Frame = 1 Query: 166 AGARKRAVTAAAKAMKKVLVEEQGTLLDGVRRSGGAALGFVTDDPAAHRSAYEKAASGALKELAAELGGSKRLGLADAFAQIDEIALEPVRQRLHDVAERVDDNDELSDTVRALYRESRSRRIDEAAAAAAVAVDG 573 AG R+ A AAKAMKKVLVEEQGTLLDG+RRSG AA+ V D AAH AY++AA+ AL+EL A LGG KRL L A QI IALEPVRQRL +VAERVDD DELSDTVRALYRESRSRR+ EAAAAA VAVDG Sbjct: 293 AGPREIAAADAAKAMKKVLVEEQGTLLDGIRRSGAAAIEVVIQDEAAHDKAYDRAATPALRELVAALGGPKRLSLRAALGQIHAIALEPVRQRLREVAERVDDPDELSDTVRALYRESRSRRLPEAAAAAVVAVDG 428
BLAST of mRNA_M-pyrifera_M_contig99104.22804.1 vs. uniprot
Match: A0A7K1Z9Y4_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z9Y4_9ACTN) HSP 1 Score: 141 bits (356), Expect = 7.770e-36 Identity = 82/134 (61.19%), Postives = 102/134 (76.12%), Query Frame = 1 Query: 172 ARKRAVTAAAKAMKKVLVEEQGTLLDGVRRSGGAALGFVTDDPAAHRSAYEKAASGALKELAAELGGSKRLGLADAFAQIDEIALEPVRQRLHDVAERVDDNDELSDTVRALYRESRSRRIDEAAAAAAVAVDG 573 AR+RA TAA +AMKKVLVEEQG+LLDG+RRSG AA+ D A+H +AY++AA AL+E LGGS L L A A I IALEPVR+RL D+A++ D ELSD VRALYRE+RSR +++AA+AA+VAVDG Sbjct: 424 ARERAATAATRAMKKVLVEEQGSLLDGIRRSGAAAM-TTFDTEASHNAAYDQAAIPALREQCVSLGGSPELDLTPALANIHVIALEPVRRRLADIAQQFDGEQELSDAVRALYREARSRHLNDAASAASVAVDG 556
BLAST of mRNA_M-pyrifera_M_contig99104.22804.1 vs. uniprot
Match: A0A2D7RWQ9_9ACTN (Uncharacterized protein n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D7RWQ9_9ACTN) HSP 1 Score: 120 bits (302), Expect = 1.350e-28 Identity = 72/133 (54.14%), Postives = 88/133 (66.17%), Query Frame = 1 Query: 175 RKRAVTAAAKAMKKVLVEEQGTLLDGVRRSGGAALGFVTDDPAAHRSAYEKAASGALKELAAELGGSKRLGLADAFAQIDEIALEPVRQRLHDVAERVDDNDELSDTVRALYRESRSRRIDEAAAAAAVAVDG 573 R RA + A +A+KK+LVEEQ +LLDG+RRSG A+ V D AH + YE A A E+ LGG + + Q+ +AL+PVR RL +VAER DD DELSDTVR LYRESRSRR+ AAAAA AV G Sbjct: 393 RARAESVATRALKKILVEEQSSLLDGIRRSGSDAITIVVADADAHAAPYESAIDAAFDEIIEALGGDAT-ARQEGYEQVRSVALDPVRSRLLEVAERTDDADELSDTVRGLYRESRSRRLPMAAAAAVSAVIG 524
BLAST of mRNA_M-pyrifera_M_contig99104.22804.1 vs. uniprot
Match: A0A2D8LU46_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LU46_9ACTN) HSP 1 Score: 115 bits (289), Expect = 8.020e-27 Identity = 74/133 (55.64%), Postives = 84/133 (63.16%), Query Frame = 1 Query: 175 RKRAVTAAAKAMKKVLVEEQGTLLDGVRRSGGAALGFVTDDPAAHRSAYEKAASGALKELAAELGGSKRLGLADAFAQIDEIALEPVRQRLHDVAERVDDNDELSDTVRALYRESRSRRIDEAAAAAAVAVDG 573 R RA A +A+KKVLVEEQ TLLDGVRRSG A+ V D AH + YE A A E +GG A Q+ +AL+PVR RL +VAE DD DELSDTVR LYRESRSRR+ AAAAA AV G Sbjct: 380 RVRAERVATRALKKVLVEEQSTLLDGVRRSGSDAIAVVVADADAHAAPYESAIDAAFDEXIEAVGGDAGTRQA-GXEQLRSVALDPVRSRLLEVAEHTDDADELSDTVRGLYRESRSRRLPMAAAAAVSAVIG 511
BLAST of mRNA_M-pyrifera_M_contig99104.22804.1 vs. uniprot
Match: A0A6B0WNU1_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0WNU1_9ACTN) HSP 1 Score: 77.4 bits (189), Expect = 3.290e-13 Identity = 56/130 (43.08%), Postives = 81/130 (62.31%), Query Frame = 1 Query: 172 ARKRAVTAAAKAMKKVLVEEQGTLLDGVRRSGGAAL-GFVTDDPAAHRSAYEKAASGALKELAAELGGS-KRLGLADAFAQIDEIALEPVRQRLHDVAERVDDNDELSDTVRALYRESRSRRIDEAAAAA 555 AR AV A+ +K+++V+EQG LLD VRR+G A+ +T D AY +A +++ A+++ S + L A + I +EPVR+RL ++ ER DD DEL+ VR++YRESRSRR D AA AA Sbjct: 433 ARAVAVGGIARRLKRLVVDEQGELLDAVRRNGVRAVRSAITGDT----RAYTRAVRVPMQDFASDIDVSIDDVDLKAAGSAILSALVEPVRERLGELIERTDDPDELTAAVRSIYRESRSRRADAAAEAA 558
BLAST of mRNA_M-pyrifera_M_contig99104.22804.1 vs. uniprot
Match: A0A7K2A1Q0_9ACTN (Uncharacterized protein n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2A1Q0_9ACTN) HSP 1 Score: 75.5 bits (184), Expect = 1.530e-12 Identity = 55/130 (42.31%), Postives = 79/130 (60.77%), Query Frame = 1 Query: 172 ARKRAVTAAAKAMKKVLVEEQGTLLDGVRRSGGAAL-GFVTDDPAAHRSAYEKAASGALKELAAELGGS-KRLGLADAFAQIDEIALEPVRQRLHDVAERVDDNDELSDTVRALYRESRSRRIDEAAAAA 555 AR AV A+ +K+++V+EQG LLD VRR+G A+ +T D AY +A +++ A+++ S + L A I +EPVR+RL ++ E DD DEL+ VR++YRESRSRR D AA AA Sbjct: 445 ARAVAVGGIARRLKRLVVDEQGDLLDAVRRNGVRAVRSTITSDT----GAYTRAVRVPMQDFASDIDVSIDDVDLEAAGRAILSALVEPVRERLGELIESTDDADELTTAVRSIYRESRSRRADTAAEAA 570
BLAST of mRNA_M-pyrifera_M_contig99104.22804.1 vs. uniprot
Match: A0A7K2E3F4_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2E3F4_9ACTN) HSP 1 Score: 75.1 bits (183), Expect = 2.070e-12 Identity = 52/129 (40.31%), Postives = 78/129 (60.47%), Query Frame = 1 Query: 172 ARKRAVTAAAKAMKKVLVEEQGTLLDGVRRSGGAALGFVTDDPAAHRSAYEKAASGALKELAAELGGS-KRLGLADAFAQIDEIALEPVRQRLHDVAERVDDNDELSDTVRALYRESRSRRIDEAAAAA 555 AR AV A+ +K+++V+EQG LLD +RR+G A+ D AY +A +++ A+++ S + L A + + +EPVR+RL ++ E DD DEL+ VR++YRESRSRR D AA AA Sbjct: 433 ARAVAVGGIARGLKRLVVDEQGDLLDALRRNGVRAVRSTIDSDT---GAYTRAVRAPMQDFASDIDVSIDDVDLDAAGSAMLAALVEPVRERLGELIESTDDPDELTTAVRSIYRESRSRRADAAAEAA 558
BLAST of mRNA_M-pyrifera_M_contig99104.22804.1 vs. uniprot
Match: A0A6N9ETD9_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9ETD9_9ACTN) HSP 1 Score: 71.2 bits (173), Expect = 4.350e-11 Identity = 50/129 (38.76%), Postives = 75/129 (58.14%), Query Frame = 1 Query: 172 ARKRAVTAAAKAMKKVLVEEQGTLLDGVRRSGGAALGFVTDDPAAHRSAYEKAASGALKELAAELGGS-KRLGLADAFAQIDEIALEPVRQRLHDVAERVDDNDELSDTVRALYRESRSRRIDEAAAAA 555 AR AV A+ +K+++V+EQG LLD +RR G A+ + A Y +A L++ A+++ S + + A + I + +EP R RL + E DD DEL+ VR++YRESRSRR + AA AA Sbjct: 405 ARAVAVGGIARRLKRLVVDEQGELLDSLRRGGSRAVRNLIS---ADAGLYTRAMVEPLQDFASDIDVSIDDIDMKAAASAIVSVLVEPARARLSQLVEETDDPDELARAVRSIYRESRSRRAEAAAEAA 530 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99104.22804.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig99104.22804.1 >prot_M-pyrifera_M_contig99104.22804.1 ID=prot_M-pyrifera_M_contig99104.22804.1|Name=mRNA_M-pyrifera_M_contig99104.22804.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=191bp EPVDDVFAKLRSARESEPEPEPVPESEPEPEPEPEPEPEPEPEPEPEPEGback to top mRNA from alignment at M-pyrifera_M_contig99104:112..684- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig99104.22804.1 ID=mRNA_M-pyrifera_M_contig99104.22804.1|Name=mRNA_M-pyrifera_M_contig99104.22804.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=573bp|location=Sequence derived from alignment at M-pyrifera_M_contig99104:112..684- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig99104:112..684- >mRNA_M-pyrifera_M_contig99104.22804.1 ID=mRNA_M-pyrifera_M_contig99104.22804.1|Name=mRNA_M-pyrifera_M_contig99104.22804.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1146bp|location=Sequence derived from alignment at M-pyrifera_M_contig99104:112..684- (Macrocystis pyrifera P11B4 male)back to top |