mRNA_M-pyrifera_M_contig99079.22795.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig99079.22795.1
Unique NamemRNA_M-pyrifera_M_contig99079.22795.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig99079.22795.1 vs. uniprot
Match: A0A1A8YSK7_9APIC (Uncharacterized protein n=1 Tax=Plasmodium ovale wallikeri TaxID=864142 RepID=A0A1A8YSK7_9APIC)

HSP 1 Score: 103 bits (256), Expect = 6.440e-23
Identity = 48/136 (35.29%), Postives = 81/136 (59.56%), Query Frame = 1
Query:    1 YVLQGDSGFEHRKKRRLRARAREHGGFRVEVRRLWG-LLEKDAHLCISKGEYCRLLLRVCKLVVPDFDEAVARQTVEEDWKRDSAGKRRMGYADFFNAMFELVDHWCPTARGRDYAKMLRSIRQCVSCALIQKKDG 405
            Y+ +GD  FE+ + ++ R   R +  F   V+ +W  +L+K     +SK EY +++LR+CK+++P F+     + V+++WK DS GK+ + +  FFN  FEL D W PT    DY   L+S+   ++C  I+KK+G
Sbjct:   99 YLEEGDLSFENEELKKEREEIRNNKVFIECVKNIWSNILKKKMDDKLSKIEYYKIMLRICKVLIPQFEIKEIIKIVDDEWKNDSKGKKHLNFFSFFNTFFELADIWTPTINANDYVYFLKSLFYRITCIHIKKKNG 234          
BLAST of mRNA_M-pyrifera_M_contig99079.22795.1 vs. uniprot
Match: A0A1C3KRY8_9APIC (Uncharacterized protein n=2 Tax=Plasmodium ovale TaxID=36330 RepID=A0A1C3KRY8_9APIC)

HSP 1 Score: 103 bits (256), Expect = 6.600e-23
Identity = 48/136 (35.29%), Postives = 81/136 (59.56%), Query Frame = 1
Query:    1 YVLQGDSGFEHRKKRRLRARAREHGGFRVEVRRLWG-LLEKDAHLCISKGEYCRLLLRVCKLVVPDFDEAVARQTVEEDWKRDSAGKRRMGYADFFNAMFELVDHWCPTARGRDYAKMLRSIRQCVSCALIQKKDG 405
            Y+ +GD  FE+ + ++ R   R +  F   V+ +W  +L+K     +SK EY +++LR+CK+++P F+     + V+++WK DS GK+ + +  FFN  FEL D W PT    DY   L+S+   ++C  I+KK+G
Sbjct:   21 YLEEGDLSFENEELKKEREEIRNNKVFIECVKNIWSNILKKKMDDKLSKIEYYKIMLRICKVLIPQFEIKEIIKIVDDEWKNDSKGKKHLNFFSFFNTFFELADIWTPTINANDYVYFLKSLFYRITCIHIKKKNG 156          
BLAST of mRNA_M-pyrifera_M_contig99079.22795.1 vs. uniprot
Match: A0A1A8WF55_9APIC (Uncharacterized protein n=1 Tax=Plasmodium ovale curtisi TaxID=864141 RepID=A0A1A8WF55_9APIC)

HSP 1 Score: 100 bits (249), Expect = 5.600e-22
Identity = 48/136 (35.29%), Postives = 78/136 (57.35%), Query Frame = 1
Query:    1 YVLQGDSGFEHRKKRRLRARAREHGGFRVEVRRLWG-LLEKDAHLCISKGEYCRLLLRVCKLVVPDFDEAVARQTVEEDWKRDSAGKRRMGYADFFNAMFELVDHWCPTARGRDYAKMLRSIRQCVSCALIQKKDG 405
            Y+ +GD  FE+ + ++ R   R +  F   V+ +W  +L K      SK EY +++LR+CK+++P F+     + V ++WK DS GK+ + +  FFN  FEL D W PT    DY   L+S+   ++C  I+KK+G
Sbjct:   85 YLEEGDLTFENEELKKEREEIRNNKVFIECVKNIWSNILNKKMDDKFSKIEYYKIMLRICKVLIPQFEIKEIIKIVNDEWKNDSKGKKHLNFYSFFNTFFELADIWTPTINANDYVYFLKSLFYRITCIHIKKKNG 220          
BLAST of mRNA_M-pyrifera_M_contig99079.22795.1 vs. uniprot
Match: A0A1D3TH87_9APIC (Uncharacterized protein n=2 Tax=Plasmodium ovale TaxID=36330 RepID=A0A1D3TH87_9APIC)

HSP 1 Score: 100 bits (249), Expect = 5.790e-22
Identity = 48/136 (35.29%), Postives = 78/136 (57.35%), Query Frame = 1
Query:    1 YVLQGDSGFEHRKKRRLRARAREHGGFRVEVRRLWG-LLEKDAHLCISKGEYCRLLLRVCKLVVPDFDEAVARQTVEEDWKRDSAGKRRMGYADFFNAMFELVDHWCPTARGRDYAKMLRSIRQCVSCALIQKKDG 405
            Y+ +GD  FE+ + ++ R   R +  F   V+ +W  +L K      SK EY +++LR+CK+++P F+     + V ++WK DS GK+ + +  FFN  FEL D W PT    DY   L+S+   ++C  I+KK+G
Sbjct:   21 YLEEGDLTFENEELKKEREEIRNNKVFIECVKNIWSNILNKKMDDKFSKIEYYKIMLRICKVLIPQFEIKEIIKIVNDEWKNDSKGKKHLNFYSFFNTFFELADIWTPTINANDYVYFLKSLFYRITCIHIKKKNG 156          
BLAST of mRNA_M-pyrifera_M_contig99079.22795.1 vs. uniprot
Match: W7AC34_PLAVN (Uncharacterized protein n=6 Tax=Plasmodium vinckei TaxID=5860 RepID=W7AC34_PLAVN)

HSP 1 Score: 99.0 bits (245), Expect = 2.000e-21
Identity = 47/136 (34.56%), Postives = 78/136 (57.35%), Query Frame = 1
Query:    1 YVLQGDSGFEHRKKRRLRARAREHGGFRVEVRRLW-GLLEKDAHLCISKGEYCRLLLRVCKLVVPDFDEAVARQTVEEDWKRDSAGKRRMGYADFFNAMFELVDHWCPTARGRDYAKMLRSIRQCVSCALIQKKDG 405
            Y+ QGD GFE+   ++ R + R +  F   V+ +W  +L K  +   SK EY +++LR+CK+++P F+     + + ++W  DS GK+ + +  FFN  FEL D W PT    DYA  L+S+   ++   I+ K+G
Sbjct:   22 YLNQGDIGFENEDLKKEREKIRSNDVFIECVKNIWTNILNKKLNDKFSKIEYFKIMLRICKVLIPQFEIKQVIKIINDEWNNDSKGKKYLNFDSFFNTFFELADIWTPTINAHDYALFLKSLFYRITFIQIKNKNG 157          
BLAST of mRNA_M-pyrifera_M_contig99079.22795.1 vs. uniprot
Match: A0A1C3KYS5_PLAMA (Uncharacterized protein n=1 Tax=Plasmodium malariae TaxID=5858 RepID=A0A1C3KYS5_PLAMA)

HSP 1 Score: 98.6 bits (244), Expect = 2.710e-21
Identity = 50/136 (36.76%), Postives = 78/136 (57.35%), Query Frame = 1
Query:    1 YVLQGDSGFEHRKKRRLRARAREHGGFRVEVRRLW-GLLEKDAHLCISKGEYCRLLLRVCKLVVPDFDEAVARQTVEEDWKRDSAGKRRMGYADFFNAMFELVDHWCPTARGRDYAKMLRSIRQCVSCALIQKKDG 405
            Y+ QGD  FE+   +R R + +    F   VR +W  +L K      SK EY +++LR+CK+++P F+     + V ++W  DS GK+ + ++ FFNA FEL D W PT    DYA  L+S+   ++   I+KK+G
Sbjct:   21 YLDQGDLKFENEDLKREREKIKSDKVFIDCVRNIWMNILNKKLDDKFSKIEYFKIMLRICKVLIPQFEIKEVVKIVNDEWNNDSKGKKYLNFSSFFNAFFELSDIWTPTINAHDYAHFLKSLFYRITFIEIKKKNG 156          
BLAST of mRNA_M-pyrifera_M_contig99079.22795.1 vs. uniprot
Match: A0A1D3PBC9_PLAMA (Uncharacterized protein n=2 Tax=Plasmodium malariae TaxID=5858 RepID=A0A1D3PBC9_PLAMA)

HSP 1 Score: 98.6 bits (244), Expect = 2.740e-21
Identity = 50/136 (36.76%), Postives = 78/136 (57.35%), Query Frame = 1
Query:    1 YVLQGDSGFEHRKKRRLRARAREHGGFRVEVRRLW-GLLEKDAHLCISKGEYCRLLLRVCKLVVPDFDEAVARQTVEEDWKRDSAGKRRMGYADFFNAMFELVDHWCPTARGRDYAKMLRSIRQCVSCALIQKKDG 405
            Y+ QGD  FE+   +R R + +    F   VR +W  +L K      SK EY +++LR+CK+++P F+     + V ++W  DS GK+ + ++ FFNA FEL D W PT    DYA  L+S+   ++   I+KK+G
Sbjct:   21 YLDQGDLKFENEDLKREREKIKSDKVFIDCVRNIWMNILNKKLDDKFSKIEYFKIMLRICKVLIPQFEIKEVVKIVNDEWNNDSKGKKYLNFSSFFNAFFELSDIWTPTINAHDYAHFLKSLFYRITFIEIKKKNG 156          
BLAST of mRNA_M-pyrifera_M_contig99079.22795.1 vs. uniprot
Match: A0A509AFD5_PLABA (Uncharacterized protein n=5 Tax=Plasmodium berghei TaxID=5821 RepID=A0A509AFD5_PLABA)

HSP 1 Score: 98.2 bits (243), Expect = 3.720e-21
Identity = 47/136 (34.56%), Postives = 78/136 (57.35%), Query Frame = 1
Query:    1 YVLQGDSGFEHRKKRRLRARAREHGGFRVEVRRLW-GLLEKDAHLCISKGEYCRLLLRVCKLVVPDFDEAVARQTVEEDWKRDSAGKRRMGYADFFNAMFELVDHWCPTARGRDYAKMLRSIRQCVSCALIQKKDG 405
            Y+ QGD GFE+   ++ R + R +  F   V+ +W  +L K  +   SK EY +++LR+CK+++P F+     + + ++W  DS GK+ + +  FFN  FEL D W PT    DYA  L+S+   ++   I+ K+G
Sbjct:   22 YLNQGDIGFENEDLKKEREKIRSNDVFIECVKNIWMNILNKKLNDKFSKIEYFKVMLRICKVLIPQFEIKQVIKIINDEWNNDSKGKKYLNFDSFFNTFFELADIWTPTINAHDYAFFLKSLFYRITFIQIKNKNG 157          
BLAST of mRNA_M-pyrifera_M_contig99079.22795.1 vs. uniprot
Match: Q7RN84_PLAYO (Uncharacterized protein n=4 Tax=Plasmodium yoelii TaxID=5861 RepID=Q7RN84_PLAYO)

HSP 1 Score: 98.2 bits (243), Expect = 3.730e-21
Identity = 47/136 (34.56%), Postives = 78/136 (57.35%), Query Frame = 1
Query:    1 YVLQGDSGFEHRKKRRLRARAREHGGFRVEVRRLW-GLLEKDAHLCISKGEYCRLLLRVCKLVVPDFDEAVARQTVEEDWKRDSAGKRRMGYADFFNAMFELVDHWCPTARGRDYAKMLRSIRQCVSCALIQKKDG 405
            Y+ QGD GFE+   ++ R + R +  F   V+ +W  +L K  +   SK EY +++LR+CK+++P F+     + + ++W  DS GK+ + +  FFN  FEL D W PT    DYA  L+S+   ++   I+ K+G
Sbjct:   22 YLNQGDIGFENEDLKKEREKIRSNDVFIECVKNIWMNILNKKLNDKFSKIEYFKVMLRICKVLIPQFEIKQVIKIINDEWNNDSKGKKYLNFDSFFNTFFELADIWTPTINAHDYAFFLKSLFYRITFIQIKNKNG 157          
BLAST of mRNA_M-pyrifera_M_contig99079.22795.1 vs. uniprot
Match: A0A2P9GEX8_9APIC (Uncharacterized protein n=1 Tax=Plasmodium sp. DRC-Itaito TaxID=720590 RepID=A0A2P9GEX8_9APIC)

HSP 1 Score: 97.4 bits (241), Expect = 6.930e-21
Identity = 50/136 (36.76%), Postives = 77/136 (56.62%), Query Frame = 1
Query:    1 YVLQGDSGFEHRKKRRLRARAREHGGFRVEVRRLW-GLLEKDAHLCISKGEYCRLLLRVCKLVVPDFDEAVARQTVEEDWKRDSAGKRRMGYADFFNAMFELVDHWCPTARGRDYAKMLRSIRQCVSCALIQKKDG 405
            Y   GD  FE+ + ++ R   R +  F   V+ +W  +L K      SK EY +++LR+CK+++P FD     + V ++W  DS GK+ + ++ FFNA FEL D W PT    DYA  L+S+   ++   I+KKDG
Sbjct:   22 YFEGGDIKFENAELKKEREEIRNNKVFIECVQNIWMNILNKKMDDKFSKVEYFKIMLRICKVLIPQFDIKEIIKIVNDEWNNDSEGKKYLNFSSFFNAFFELSDIWTPTINAYDYAHFLKSLFYRITFIEIKKKDG 157          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99079.22795.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1A8YSK7_9APIC6.440e-2335.29Uncharacterized protein n=1 Tax=Plasmodium ovale w... [more]
A0A1C3KRY8_9APIC6.600e-2335.29Uncharacterized protein n=2 Tax=Plasmodium ovale T... [more]
A0A1A8WF55_9APIC5.600e-2235.29Uncharacterized protein n=1 Tax=Plasmodium ovale c... [more]
A0A1D3TH87_9APIC5.790e-2235.29Uncharacterized protein n=2 Tax=Plasmodium ovale T... [more]
W7AC34_PLAVN2.000e-2134.56Uncharacterized protein n=6 Tax=Plasmodium vinckei... [more]
A0A1C3KYS5_PLAMA2.710e-2136.76Uncharacterized protein n=1 Tax=Plasmodium malaria... [more]
A0A1D3PBC9_PLAMA2.740e-2136.76Uncharacterized protein n=2 Tax=Plasmodium malaria... [more]
A0A509AFD5_PLABA3.720e-2134.56Uncharacterized protein n=5 Tax=Plasmodium berghei... [more]
Q7RN84_PLAYO3.730e-2134.56Uncharacterized protein n=4 Tax=Plasmodium yoelii ... [more]
A0A2P9GEX8_9APIC6.930e-2136.76Uncharacterized protein n=1 Tax=Plasmodium sp. DRC... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99079contigM-pyrifera_M_contig99079:270..674 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeApicomplexa
Seed ortholog score98.6
Seed ortholog evalue2.4e-18
Seed eggNOG ortholog5860.XP_008625991.1
Hectar predicted targeting categoryother localisation
EggNOG OGs2CZZ6@1,2SC72@2759,3KF0H@422676,3YHYQ@5794,3YYF3@5819
Best tax levelHaemosporida
Best eggNOG OGNA|NA|NA
Exons1
Model size405
Cds size405
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816907.7026746-CDS-M-pyrifera_M_contig99079:269..6741622816907.7026746-CDS-M-pyrifera_M_contig99079:269..674Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99079 270..674 +
1692278248.7324057-CDS-M-pyrifera_M_contig99079:269..6741692278248.7324057-CDS-M-pyrifera_M_contig99079:269..674Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig99079 270..674 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99079.22795.1prot_M-pyrifera_M_contig99079.22795.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig99079 270..674 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig99079.22795.1

>prot_M-pyrifera_M_contig99079.22795.1 ID=prot_M-pyrifera_M_contig99079.22795.1|Name=mRNA_M-pyrifera_M_contig99079.22795.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=135bp
YVLQGDSGFEHRKKRRLRARAREHGGFRVEVRRLWGLLEKDAHLCISKGE
YCRLLLRVCKLVVPDFDEAVARQTVEEDWKRDSAGKRRMGYADFFNAMFE
LVDHWCPTARGRDYAKMLRSIRQCVSCALIQKKDG
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mRNA from alignment at M-pyrifera_M_contig99079:270..674+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig99079.22795.1 ID=mRNA_M-pyrifera_M_contig99079.22795.1|Name=mRNA_M-pyrifera_M_contig99079.22795.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=405bp|location=Sequence derived from alignment at M-pyrifera_M_contig99079:270..674+ (Macrocystis pyrifera P11B4 male)
TACGTGTTGCAGGGCGACTCTGGGTTTGAGCACCGGAAGAAGCGTCGGTT GCGCGCTCGTGCTCGGGAGCACGGGGGGTTCCGCGTGGAGGTGCGTCGCT TGTGGGGTTTGTTGGAGAAGGACGCGCACCTGTGCATCAGCAAAGGCGAG TATTGCCGGCTGCTGCTCCGGGTGTGCAAGTTGGTGGTGCCCGACTTCGA CGAGGCCGTGGCGCGGCAGACGGTGGAGGAGGACTGGAAGCGGGATAGTG CGGGAAAGCGGCGCATGGGCTATGCGGACTTTTTCAACGCCATGTTCGAG CTGGTCGACCACTGGTGCCCCACCGCAAGAGGCAGAGACTACGCCAAAAT GCTACGCTCCATCCGACAGTGCGTCTCCTGTGCCCTCATCCAGAAGAAGG ACGGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig99079:270..674+

>mRNA_M-pyrifera_M_contig99079.22795.1 ID=mRNA_M-pyrifera_M_contig99079.22795.1|Name=mRNA_M-pyrifera_M_contig99079.22795.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=810bp|location=Sequence derived from alignment at M-pyrifera_M_contig99079:270..674+ (Macrocystis pyrifera P11B4 male)
TACGTGTTGCAGGGCGACTCTGGGTTTGAGCACCGGAAGAAGCGTCGGTT
GCGCGCTCGTGCTCGGGAGCACGGGGGGTTCCGCGTGGAGGTGCGTCGCT
TGTGGGGTTTGTTGGAGAAGGACGCGCACCTGTGCATCAGCAAAGGCGAG
TATTGCCGGCTGCTGCTCCGGGTGTGCAAGTTGGTGGTGCCCGACTTCGA
CGAGGCCGTGGCGCGGCAGACGGTGGAGGAGGACTGGAAGCGGGATAGTG
CGGGAAAGCGGCGCATGGGCTATGCGGACTTTTTCAACGCCATGTTCGAG
CTGGTCGACCACTGGTGCCCCACCGCAAGAGGCAGAGACTACGCCAAAAT
GCTACGCTCCATCCGACAGTGCGTCTCCTGTGCCCTCATCCAGAAGAAGG
ACGGGTACGTGTTGCAGGGCGACTCTGGGTTTGAGCACCGGAAGAAGCGT
CGGTTGCGCGCTCGTGCTCGGGAGCACGGGGGGTTCCGCGTGGAGGTGCG
TCGCTTGTGGGGTTTGTTGGAGAAGGACGCGCACCTGTGCATCAGCAAAG
GCGAGTATTGCCGGCTGCTGCTCCGGGTGTGCAAGTTGGTGGTGCCCGAC
TTCGACGAGGCCGTGGCGCGGCAGACGGTGGAGGAGGACTGGAAGCGGGA
TAGTGCGGGAAAGCGGCGCATGGGCTATGCGGACTTTTTCAACGCCATGT
TCGAGCTGGTCGACCACTGGTGCCCCACCGCAAGAGGCAGAGACTACGCC
AAAATGCTACGCTCCATCCGACAGTGCGTCTCCTGTGCCCTCATCCAGAA
GAAGGACGGG
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