mRNA_M-pyrifera_M_contig99077.22793.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig99077.22793.1 vs. uniprot
Match: A0A6A4VEQ5_AMPAM (DNA topoisomerase n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4VEQ5_AMPAM) HSP 1 Score: 180 bits (457), Expect = 8.930e-52 Identity = 97/212 (45.75%), Postives = 132/212 (62.26%), Query Frame = 1 Query: 1 KQVSREHEKLAQNLRKQARAASELALWLDCDREGENIAMEVVGVCRRVNRALRVRRARFSAVVPAEVMRAAARMDDPDLKMAAAVDARQELDLRIGAAFTRMQTMLLRPVVPDIVRDLRIVSYGPCQFPTFGFVVERFLQIRLFHPERFWSLRLLVRNPEGGGGGGALRWERKRVFDELTALVLGDVATDAVSQRAARVVEREARPRRKWKP 636 KQ S ++E + + L ++AR L +W DCDREGENI E++ VCR VN L+V RARFS + PA V RA + +PD + +AAVD RQELDLRIGAAFTR QT+ L+ V P + D ++SYG CQFPT GFVVER+ I+ F PE FW +++ PEG W+R R+FDE L + + A + +++P+ KW+P Sbjct: 87 KQCSTDYEPIMRTLEREARRCQMLVIWTDCDREGENIGFEIINVCRAVNPQLKVLRARFSEITPASVRRAVNNLVEPDGRASAAVDVRQELDLRIGAAFTRFQTLRLKQVFPARLAD-HLISYGSCQFPTLGFVVERYKAIQSFIPESFWKIKVSHMRPEGNVD---FNWKRVRLFDEACCRALFERCCE---NSTATITHVQSKPKSKWRP 291
BLAST of mRNA_M-pyrifera_M_contig99077.22793.1 vs. uniprot
Match: A0A1I8IDZ5_9PLAT (DNA topoisomerase n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8IDZ5_9PLAT) HSP 1 Score: 178 bits (452), Expect = 9.460e-51 Identity = 99/213 (46.48%), Postives = 135/213 (63.38%), Query Frame = 1 Query: 1 KQVSREHEKLAQNLRKQARAASELALWLDCDREGENIAMEVVGVCRRVNRALRVRRARFSAVVPAEVMRAAARMDDPDLKMAAAVDARQELDLRIGAAFTRMQTMLLRPVVPDIVRDLRIVSYGPCQFPTFGFVVERFLQIRLFHPERFWSLRLLVRNPEGGGGGGALRWERKRVFDELTA-LVLGDVATDAVSQRAARVVEREARPRRKWKP 636 KQ+ R+++ + L + A++A L +W DCDREGENI ME+V VC N L V RA+FS + V RA A + D +++ AVDARQELDLRIGAAFTR QT+ LR V P ++ D ++VSYG CQFPT GFVVERF + F PE FW LR+L +P+ G L W+R RV+D+ + L V + A V+ E++P+ +W+P Sbjct: 87 KQIQRDYQPIRDTLTQLAKSAQRLVIWTDCDREGENIGMEIVNVCMASNPRLDVYRAKFSEITRPAVQRALASLTRMDERVSDAVDARQELDLRIGAAFTRFQTLRLRQVFPAVLAD-QLVSYGSCQFPTLGFVVERFKEAERFQPEPFWRLRVLAESPDTGQSAEFL-WKRGRVYDQAVGQMFLAHVLESPI----ATVISVESKPKNRWRP 293
BLAST of mRNA_M-pyrifera_M_contig99077.22793.1 vs. uniprot
Match: A0A6A4WHV7_AMPAM (DNA topoisomerase n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4WHV7_AMPAM) HSP 1 Score: 180 bits (457), Expect = 2.780e-50 Identity = 97/212 (45.75%), Postives = 132/212 (62.26%), Query Frame = 1 Query: 1 KQVSREHEKLAQNLRKQARAASELALWLDCDREGENIAMEVVGVCRRVNRALRVRRARFSAVVPAEVMRAAARMDDPDLKMAAAVDARQELDLRIGAAFTRMQTMLLRPVVPDIVRDLRIVSYGPCQFPTFGFVVERFLQIRLFHPERFWSLRLLVRNPEGGGGGGALRWERKRVFDELTALVLGDVATDAVSQRAARVVEREARPRRKWKP 636 KQ S ++E + + L ++AR L +W DCDREGENI E++ VCR VN L+V RARFS + PA V RA + +PD + +AAVD RQELDLRIGAAFTR QT+ L+ V P + D ++SYG CQFPT GFVVER+ I+ F PE FW +++ PEG W+R R+FDE L + + A + +++P+ KW+P Sbjct: 139 KQCSTDYEPIMRTLEREARRCQMLVIWTDCDREGENIGFEIINVCRAVNPQLKVLRARFSEITPASVRRAVNNLVEPDGRASAAVDVRQELDLRIGAAFTRFQTLRLKQVFPARLAD-HLISYGSCQFPTLGFVVERYKTIQSFIPESFWKIKVSHMRPEGNVD---FNWKRVRLFDEACCRALFERCCE---NSTATITHVQSKPKSKWRP 343
BLAST of mRNA_M-pyrifera_M_contig99077.22793.1 vs. uniprot
Match: A0A4Q2DJP5_9AGAR (DNA topoisomerase n=1 Tax=Candolleomyces aberdarensis TaxID=2316362 RepID=A0A4Q2DJP5_9AGAR) HSP 1 Score: 178 bits (452), Expect = 7.420e-49 Identity = 97/203 (47.78%), Postives = 132/203 (65.02%), Query Frame = 1 Query: 34 QNLRKQARAASELALWLDCDREGENIAMEVVGVCRRVNRALRVRRARFSAVVPAEVMRAAARMDDPDLKMAAAVDARQELDLRIGAAFTRMQTMLLRPVVPDIVRDLRIVSYGPCQFPTFGFVVERFLQIRLFHPERFWSLRLLVRNPEGGGGGGA--LRWERKRVFDELTALVLGDVATDAVSQRAARVVEREARPRRKWKP 636 +NL QAR + L +W DCDREGE+I ME+V +CRRV +RV+RARFSA++P ++ RAA + D + A AVDAR LDL+IGAAFTR+QT+ LR V+P V + ++S+GPCQFPT GFVVERF++++ F PE+FW + L + G G A RW+R + D TA+ L T + ARV + +KWKP Sbjct: 96 ENLMTQARRVATLMIWTDCDREGEHIGMEIVNICRRVKPNIRVQRARFSAIIPQQIHRAAQNPVELDRRQADAVDARIILDLKIGAAFTRLQTLTLRNVIP--VPEKSVISFGPCQFPTLGFVVERFMKVKDFRPEQFWLIHLELTRDLGNGDSEAAEFRWKRGHLLDHHTAISL---YTSVLENPRARVTNVTRKETKKWKP 293
BLAST of mRNA_M-pyrifera_M_contig99077.22793.1 vs. uniprot
Match: A0A6A4WJK8_AMPAM (DNA topoisomerase n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4WJK8_AMPAM) HSP 1 Score: 180 bits (457), Expect = 9.050e-49 Identity = 97/212 (45.75%), Postives = 132/212 (62.26%), Query Frame = 1 Query: 1 KQVSREHEKLAQNLRKQARAASELALWLDCDREGENIAMEVVGVCRRVNRALRVRRARFSAVVPAEVMRAAARMDDPDLKMAAAVDARQELDLRIGAAFTRMQTMLLRPVVPDIVRDLRIVSYGPCQFPTFGFVVERFLQIRLFHPERFWSLRLLVRNPEGGGGGGALRWERKRVFDELTALVLGDVATDAVSQRAARVVEREARPRRKWKP 636 KQ S ++E + + L ++AR L +W DCDREGENI E++ VCR VN L+V RARFS + PA V RA + +PD + +AAVD RQELDLRIGAAFTR QT+ L+ V P + D ++SYG CQFPT GFVVER+ I+ F PE FW +++ PEG W+R R+FDE L + + A + +++P+ KW+P Sbjct: 139 KQCSTDYEPIMRTLEREARRCQMLVIWTDCDREGENIGFEIINVCRAVNPQLKVLRARFSEITPASVRRAVNNLVEPDGRASAAVDVRQELDLRIGAAFTRFQTLRLKQVFPARLAD-HLISYGSCQFPTLGFVVERYKTIQSFIPESFWKIKVSHMRPEGNVD---FNWKRVRLFDEACCRALFERCCE---NSTATITHVQSKPKSKWRP 343
BLAST of mRNA_M-pyrifera_M_contig99077.22793.1 vs. uniprot
Match: UPI0002C3EE62 (DNA topoisomerase 3-alpha, putative n=1 Tax=Entamoeba invadens IP1 TaxID=370355 RepID=UPI0002C3EE62) HSP 1 Score: 176 bits (445), Expect = 3.320e-48 Identity = 93/200 (46.50%), Postives = 133/200 (66.50%), Query Frame = 1 Query: 37 NLRKQARAASELALWLDCDREGENIAMEVVGVCRRVNRALRVRRARFSAVVPAEVMRAAARMDDPDLKMAAAVDARQELDLRIGAAFTRMQTMLLRPVVPDIVRDLRIVSYGPCQFPTFGFVVERFLQIRLFHPERFWSLRLLVRNPEGGGGGGALRWERKRVFDELTALVLGDVATDAVSQRAARVVEREARPRRKWKP 636 NL+ A+ A L LWLDCDREGENI+ EV+ VC VN+ L+V RA F+++VP E+ RA + PD ++ AVD RQELDLR GAAFTR QT LL+ VP +++DL+++SYG CQFPT GFV++R+ QI+ F E+F+ ++ +V+ G W+R R+FD + L+L + A D V Q A++ E + + +KP Sbjct: 102 NLKDVAKGADTLVLWLDCDREGENISFEVIDVCESVNKHLKVFRAHFNSLVPVEIARAYRTLTPPDKNLSDAVDIRQELDLRTGAAFTRFQTTLLKRQVP-VLKDLKVISYGACQFPTLGFVIDRYYQIKSFTKEKFYKIKCIVKKE---GIETEFLWDRNRLFDRIACLILYEDALDKVKQ--AKITEILQKSKTNFKP 295
BLAST of mRNA_M-pyrifera_M_contig99077.22793.1 vs. uniprot
Match: A0A267E745_9PLAT (DNA topoisomerase (Fragment) n=2 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267E745_9PLAT) HSP 1 Score: 178 bits (452), Expect = 4.430e-48 Identity = 99/213 (46.48%), Postives = 135/213 (63.38%), Query Frame = 1 Query: 1 KQVSREHEKLAQNLRKQARAASELALWLDCDREGENIAMEVVGVCRRVNRALRVRRARFSAVVPAEVMRAAARMDDPDLKMAAAVDARQELDLRIGAAFTRMQTMLLRPVVPDIVRDLRIVSYGPCQFPTFGFVVERFLQIRLFHPERFWSLRLLVRNPEGGGGGGALRWERKRVFDELTA-LVLGDVATDAVSQRAARVVEREARPRRKWKP 636 KQ+ R+++ + L + A++A L +W DCDREGENI ME+V VC N L V RA+FS + V RA A + D +++ AVDARQELDLRIGAAFTR QT+ LR V P ++ D ++VSYG CQFPT GFVVERF + F PE FW LR+L +P+ G L W+R RV+D+ + L V + A V+ E++P+ +W+P Sbjct: 125 KQIQRDYQPIRDTLTQLAKSAQRLVIWTDCDREGENIGMEIVNVCMASNPRLDVYRAKFSEITRPAVQRALASLTRMDERVSDAVDARQELDLRIGAAFTRFQTLRLRQVFPAVLAD-QLVSYGSCQFPTLGFVVERFKEAERFQPEPFWRLRVLAESPDTGQSAEFL-WKRGRVYDQAVGQMFLAHVLESPI----ATVISVESKPKNRWRP 331
BLAST of mRNA_M-pyrifera_M_contig99077.22793.1 vs. uniprot
Match: A0A1I8GFT8_9PLAT (DNA topoisomerase n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8GFT8_9PLAT) HSP 1 Score: 177 bits (449), Expect = 5.310e-48 Identity = 99/213 (46.48%), Postives = 135/213 (63.38%), Query Frame = 1 Query: 1 KQVSREHEKLAQNLRKQARAASELALWLDCDREGENIAMEVVGVCRRVNRALRVRRARFSAVVPAEVMRAAARMDDPDLKMAAAVDARQELDLRIGAAFTRMQTMLLRPVVPDIVRDLRIVSYGPCQFPTFGFVVERFLQIRLFHPERFWSLRLLVRNPEGGGGGGALRWERKRVFDELTA-LVLGDVATDAVSQRAARVVEREARPRRKWKP 636 KQ+ R+++ + L + A++A L +W DCDREGENI ME+V VC N L V RA+FS + V RA A + D +++ AVDARQELDLRIGAAFTR QT+ LR V P ++ D ++VSYG CQFPT GFVVERF + F PE FW LR+L +P+ G L W+R RV+D+ + L V + A V+ E++P+ +W+P Sbjct: 87 KQIQRDYQPIRDTLTQLAKSAQRLVIWTDCDREGENIGMEIVNVCMASNPRLDVYRAKFSEITRPAVQRALASLTRMDERVSDAVDARQELDLRIGAAFTRFQTLRLRQVFPAVLAD-QLVSYGSCQFPTLGFVVERFKEAERFQPEPFWRLRVLAESPDTGQSVEFL-WKRGRVYDQAVGQMFLAHVLESPI----ATVISVESKPKNRWRP 293
BLAST of mRNA_M-pyrifera_M_contig99077.22793.1 vs. uniprot
Match: W7U2W4_9STRA (DNA topoisomerase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2W4_9STRA) HSP 1 Score: 170 bits (430), Expect = 5.530e-48 Identity = 99/217 (45.62%), Postives = 133/217 (61.29%), Query Frame = 1 Query: 1 KQVSREHEKLAQNLRKQARAASELALWLDCDREGENIAMEVVGVCRRVNRALRVRRARFSAVVPAEVMRAAARMDDPDLKMAAAVDARQELDLRIGAAFTRMQTMLLRPVVPDIVRDLRIVSYGPCQFPTFGFVVERFLQIRLFHPERFWSLRLLVRNPEGGGGGGA-----LRWERKRVFDELTALVLGDVATDAVSQRAARVVEREARPRRKWKP 636 K+V ++ E L + L+ +AR L LWLDCD EGENIA EV+ VCR N LRV RARFSA++P E+ A + +P++ + AV+AR E+DLRIGAAFTR QT+ L+ D V D I+SYGPCQFPT GFVV+R+ I F E FW +++ R G GG +W+R+R+FDE VL + +A + ARV A P + +P Sbjct: 93 KKVGKDKESLERCLKSEARVCQRLILWLDCDLEGENIAFEVMDVCRAANSRLRVERARFSALIPREIWHALEHLVEPNVYQSEAVNARMEIDLRIGAAFTRFQTLKLQGKF-DGVED-SIISYGPCQFPTMGFVVDRYKAIESFQREEFWRIQMAYRGGREDGDGGPQGITRFQWKRERLFDEAACAVLYVMVVEA---KEARVTHVNAAPATRDRP 304
BLAST of mRNA_M-pyrifera_M_contig99077.22793.1 vs. uniprot
Match: A0A8K0JLW5_9TREE (Uncharacterized protein n=2 Tax=Filobasidium floriforme TaxID=5210 RepID=A0A8K0JLW5_9TREE) HSP 1 Score: 177 bits (449), Expect = 8.920e-48 Identity = 93/203 (45.81%), Postives = 135/203 (66.50%), Query Frame = 1 Query: 28 LAQNLRKQARAASELALWLDCDREGENIAMEVVGVCRRVNRALRVRRARFSAVVPAEVMRAAARMDDPDLKMAAAVDARQELDLRIGAAFTRMQTMLLRPVVPDIVRDLRIVSYGPCQFPTFGFVVERFLQIRLFHPERFWSLRLLVRNPEGGGGGGALRWERKRVFDELTALVLGDVATDAVSQRAARVVEREARPRRKWKP 636 +AQNL+++AR A L +W DCDREGE+I E+V VCR VN LRV+RARFSA++PA++ RA + D++ A AVDAR LDLR+GAAFTR+QTM L+ VPD+ D +++SYGPCQ+PT GFV ++ +++ F PE FW + + + + +W R +FD A+VL ++ ++ ARV + +P +KWKP Sbjct: 100 VAQNLKEEARRADILMIWTDCDREGEHIGQEIVNVCREVNARLRVKRARFSAIIPAQIHRACQNPFELDVRQAEAVDARISLDLRLGAAFTRLQTMTLQQRVPDL--DGKVISYGPCQYPTLGFVCDQHFRVQNFVPETFWYISVGLERDDNNV---QFKWSRGHLFDFEMAVVLYEICVESPM---ARVTNVKTKPTQKWKP 294 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99077.22793.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig99077.22793.1 >prot_M-pyrifera_M_contig99077.22793.1 ID=prot_M-pyrifera_M_contig99077.22793.1|Name=mRNA_M-pyrifera_M_contig99077.22793.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=212bp KQVSREHEKLAQNLRKQARAASELALWLDCDREGENIAMEVVGVCRRVNRback to top mRNA from alignment at M-pyrifera_M_contig99077:4..690+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig99077.22793.1 ID=mRNA_M-pyrifera_M_contig99077.22793.1|Name=mRNA_M-pyrifera_M_contig99077.22793.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=687bp|location=Sequence derived from alignment at M-pyrifera_M_contig99077:4..690+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig99077:4..690+ >mRNA_M-pyrifera_M_contig99077.22793.1 ID=mRNA_M-pyrifera_M_contig99077.22793.1|Name=mRNA_M-pyrifera_M_contig99077.22793.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1272bp|location=Sequence derived from alignment at M-pyrifera_M_contig99077:4..690+ (Macrocystis pyrifera P11B4 male)back to top |