mRNA_M-pyrifera_M_contig99055.22785.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig99055.22785.1 vs. uniprot
Match: A0A3D5DD52_9GAMM (Fe/B12 periplasmic-binding domain-containing protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DD52_9GAMM) HSP 1 Score: 160 bits (404), Expect = 1.480e-45 Identity = 88/156 (56.41%), Postives = 109/156 (69.87%), Query Frame = 1 Query: 1 LQPDLVLTGVHTASGANDLLRRLGFNVLSFEPALDLDTFRASFRRLAAAIGASVRAERLLATMDRRIELSRQRTPTARPTAIIYRPNGFSPGFRSLAHDMLVAAGFRNLAQDFGIEYGGFVPLERLVVAAPDFVLLDANPTDSPALADAILIHPAL 468 L PDLVL G +TA+G LL++LG+ VL F+P LD+D FR SF RLA AIGA +A +LL MD+ I ++ T P AIIY+PNGFSPG +SLA++ML AG NLA +F IE+GGFVPLE+LVVA PD V+L PALA+ L HPAL Sbjct: 91 LDPDLVLAGSYTATGTTTLLKQLGYRVLIFKPVLDIDGFRNSFLRLADAIGAIEKANQLLIKMDKDIAEIKKPETTLWPRAIIYQPNGFSPGVQSLANEMLDIAGVTNLAAEFNIEHGGFVPLEQLVVAKPDVVILPGQFKRFPALANIFLTHPAL 246
BLAST of mRNA_M-pyrifera_M_contig99055.22785.1 vs. uniprot
Match: A0A2E8PHP2_9RHOB (Cobalamin ABC transporter substrate-binding protein n=3 Tax=Rhodobacteraceae TaxID=31989 RepID=A0A2E8PHP2_9RHOB) HSP 1 Score: 137 bits (346), Expect = 4.060e-36 Identity = 78/191 (40.84%), Postives = 112/191 (58.64%), Query Frame = 1 Query: 1 LQPDLVLTGVHTASGANDLLRRLGFNVLSFEPALDLDTFRASFRRLAAAIGASVRAERLLATMDRRIELSRQRTPTARPTAIIYRPNGFSPGFRSLAHDMLVAAGFRNLAQDFGIEYGGFVPLERLVVAAPDFVLLDANPTDSPALADAILIHPALLKQRDRKHLRRIEIAEKYWTCGGTFIAEAIEHLAA 573 ++PDLVL G +TA +LRRLGF V +F P D D RA+ RR+ A +G +AE + A MD R+E +R RP A + +S G +LAH+++ AAG RNL + GI +PLERLV+ AP+ +L+ A P P+L++ + HPAL + R R+ +A+ W CG F AEA+ L+A Sbjct: 112 MRPDLVLAGTYTARETVSMLRRLGFRVETFAPEADFDVIRANIRRMGALLGREAQAEAMTAEMDARLEAARPAPDAPRPLAALLEAASWSSGAGTLAHEIVTAAGLRNLGAELGITGMARLPLERLVMGAPE-LLIAARPYTPPSLSEQGMRHPALAPLQARAG--RVALADARWVCGAPFTAEAVADLSA 299
BLAST of mRNA_M-pyrifera_M_contig99055.22785.1 vs. uniprot
Match: UPI001430E23B (ABC transporter substrate-binding protein n=1 Tax=Pseudooceanicola sp. HF7 TaxID=2721560 RepID=UPI001430E23B) HSP 1 Score: 132 bits (331), Expect = 2.140e-34 Identity = 77/192 (40.10%), Postives = 114/192 (59.38%), Query Frame = 1 Query: 1 LQPDLVLTGVHTASGANDLLRRLGFNVLSFEPALDLDTFRASFRRLAAAIGASVRAERLLATMDRRIELSRQRTPTARPTAIIYRPNGFSPGFRSLAHDMLVAAGFRNLAQDFGIEYGGFVPLERLVVAAPDFVLLDANPTDSPALADAILIHPALLKQRDRKHLRRIEIAEKYWTCGGTFIAEAIEHLAAF 576 +QPDLVL G +T+ +LRRLG VL +PA L R R+ AA+G VRAE L+A D R+E+ R + P+A IY NG++ G R+LA ++L+AAGF N+A D GG +PLE+L +A P+ L+ P + ++A+L HP + RDR+ +A++ W CG ++ +A+E LA F Sbjct: 88 MQPDLVLAGGYTSRATVSMLRRLGREVLEVQPAYSLADIRDRLARIGAALGREVRAEALIADFDARLEVLRAEVARS-PSAAIYYANGYTTGDRTLAGEILMAAGFSNIAGDMR---GGHLPLEKLAMADPE-ALITGTPYPGASRSEAVLAHPVVQAIRDRRASH--PVADRDWLCGTPYVLQAVEELAIF 272
BLAST of mRNA_M-pyrifera_M_contig99055.22785.1 vs. uniprot
Match: A0A2D9F7Y4_9PROT (ABC transporter substrate-binding protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D9F7Y4_9PROT) HSP 1 Score: 132 bits (333), Expect = 2.410e-34 Identity = 75/192 (39.06%), Postives = 107/192 (55.73%), Query Frame = 1 Query: 1 LQPDLVLTGVHTASGANDLLRRLGFNVLSFEPALDLDTFRASFRRLAAAIGASVRAERLLATMDRRIELSRQRTPTAR--PTAIIYRPNGFSPGFRSLAHDMLVAAGFRNLAQDFGIEYGGFVPLERLVVAAPDFVLLDANPTDSPALADAILIHPALLKQRDRKHLRRIEIAEKYWTCGGTFIAEAIEHLA 570 L+PDL+L G +T +LRR G +L+ +PA + RR+ A+G + +AER++ DRR+ R+R+ R P I+ +P G + G SL +L AAG RNL+ D G+ GF+PLERL+ A PD +++ A + P+L L HPA D RRIE+ WTCGG AEA+ LA Sbjct: 111 LRPDLILAGTYTTRATTTILRRFGHRILTLDPASGFADIHDNIRRVGKALGEAPKAERIIYDFDRRLADVRRRSSPGRLAPRTIVLQPRGMTTGPGSLVDGILRAAGLRNLSADLGVTGMGFLPLERLIAARPDLLVVAARTAERPSLTHQALHHPAHAALGDA---RRIELPASLWTCGGPQAAEAVARLA 299
BLAST of mRNA_M-pyrifera_M_contig99055.22785.1 vs. uniprot
Match: A0A418SIS3_9RHOB (Vitamin B12-binding protein n=1 Tax=Pseudooceanicola algae TaxID=1537215 RepID=A0A418SIS3_9RHOB) HSP 1 Score: 131 bits (330), Expect = 2.880e-34 Identity = 80/192 (41.67%), Postives = 113/192 (58.85%), Query Frame = 1 Query: 1 LQPDLVLTGVHTASGANDLLRRLGFNVLSFEPALDLDTFRASFRRLAAAIGASVRAERLLATMDRRIELSRQRTPTARPTAIIYRPNGFSPGFRSLAHDMLVAAGFRNLAQDFGIEYGGFVPLERLVVAAPDFVLLDANPTDSPALADAILIHPALLKQRDRKHLRRIEIAEKYWTCGGTFIAEAIEHLAAF 576 LQPDLVL G +T+ +LRRLG V+ PA LD R ++ AA+G A L+A D R++ R +T T PTA IY NG++ G R+LA +L+AAGF N+A D G GG +PLERLV+A P+ L+ +P + ++ IL HPA+ RD+ LR +A++ W CG + +A+ LA F Sbjct: 86 LQPDLVLAGSYTSRATVSMLRRLGREVVEVRPAYSLDDIRDRITQVGAALGRDAAAADLIADFDARLDALRVQT-TRNPTAAIYYANGYTTGDRTLAGQILMAAGFENIAGDMG---GGHLPLERLVMARPE-ALITGSPYPGASRSEEILRHPAVAALRDQSALR--VVADRDWLCGTPHVLKAVAALAEF 270
BLAST of mRNA_M-pyrifera_M_contig99055.22785.1 vs. uniprot
Match: A0A2T0WZ95_9RHOB (Iron complex transport system substrate-binding protein n=1 Tax=Hasllibacter halocynthiae TaxID=595589 RepID=A0A2T0WZ95_9RHOB) HSP 1 Score: 127 bits (320), Expect = 9.260e-33 Identity = 81/190 (42.63%), Postives = 110/190 (57.89%), Query Frame = 1 Query: 1 LQPDLVLTGVHTASGANDLLRRLGFNVLSFEPALDLDTFRASFRRLAAAIGASVRAERLLATMDRRIELSRQRTPTARPTAIIYRPNGFSPGFRSLAHDMLVAAGFRNLAQDFGIEYGGFVPLERLVVAAPDFVLLDANPTDSPALADAILIHPALLKQRDRKHLRRIEIAEKYWTCGGTFIAEAIEHLA 570 + PDLVL G + A D+L LG V +FEPA DL A RR+ A +G RAE L A + R+E R T RP A +Y NG++ G R+LA +L+AAGFRN+A + G GG +PLE LV+AAP+ V++ + ++ IL HPA+ R+ RR IA++ W CG F+ AIE LA Sbjct: 85 MDPDLVLAGSFSGRAAADMLAGLGIPVETFEPATDLGDVAAGLRRVGALLGREERAEALAAGFEARLEALRDETGR-RPRAALYYANGYTLGDRTLAGQILLAAGFRNVAAEAGFPAGGVMPLEVLVMAAPE-VVVTGQRYPGASRSEEILDHPAVRALREG---RRGGIADQDWVCGTPFVLRAIEDLA 269
BLAST of mRNA_M-pyrifera_M_contig99055.22785.1 vs. uniprot
Match: UPI000478321F (ABC transporter substrate-binding protein n=1 Tax=Neomegalonema perideroedes TaxID=217219 RepID=UPI000478321F) HSP 1 Score: 126 bits (317), Expect = 2.410e-32 Identity = 72/180 (40.00%), Postives = 103/180 (57.22%), Query Frame = 1 Query: 1 LQPDLVLTGVHTASGANDLLRRLGFNVLSFEPALDLDTFRASFRRLAAAIGASVRAERLLATMDRRIELSRQ-RTPTARPTAIIYRPNGFSPGFRSLAHDMLVAAGFRNLAQDFGIEYGGFVPLERLVVAAPDFVLLDANPTDSPALADAILIHPALLKQRDRKHLRRIEIA-EKYWTCG 534 L PDLVL G T++ +L RLG V PA DL+ A RR+ +G +AE + A + + + R + RP A +Y NG++PG +SLA D+L AGF ++A +FG++YGGFVPLE LV+A PD V+ + A + IL+HPAL R R R +E+ ++ W CG Sbjct: 76 LNPDLVLAGTFTSAATVGMLERLGLRVERLAPAYDLEEIAALIRRMGGLLGREAQAEAMAAEFEADLAVLRAGAAESTRPRAALYEANGYAPGEKSLAADLLRTAGFASVAAEFGLDYGGFVPLELLVLAEPDVVIAGRPRAEGAARGEEILVHPALEALRAR---RGVEVLPDRDWICG 252
BLAST of mRNA_M-pyrifera_M_contig99055.22785.1 vs. uniprot
Match: A0A168TWA6_9CYAN (Fe/B12 periplasmic-binding domain-containing protein n=1 Tax=Phormidium willei BDU 130791 TaxID=399101 RepID=A0A168TWA6_9CYAN) HSP 1 Score: 126 bits (317), Expect = 3.100e-32 Identity = 81/195 (41.54%), Postives = 105/195 (53.85%), Query Frame = 1 Query: 1 LQPDLVLTGVHTASGANDLLRRLGFNVLSFEPALDLDTFRASFRRLAAAIGASVRAERLLATMDRRI-ELSRQRTPTARPTAIIYRPNGFSPGFRSLAHDMLVAAGFRNLAQDFGIEYGGFVPLERLVVAAPDFVLLDANPTDSPALADAILIHPALLKQRDRKHLRRIEIAEKYWTCGGTFIAEAIEHLAAFAA 582 L+PDLVL G ++ L+RLG VL A D D RA+ RRL AA+ RAE L+A D R+ +L P A IY NG+S G L H +L AAG RNLA ++ +PLE LV A PD V+ A+P +PALA+A+L HPA R R + + W+CG IA+A+ LAA A Sbjct: 87 LRPDLVLAGSYSTRSTVFGLKRLGIPVLEMTAAGDFDGIRANLRRLGAALEVQARAEELIAAFDARLADLKPAAGAAPPPLAAIYAANGWSAGPGHLRHAVLEAAGLRNLASTAKVDKRSQLPLEVLVAAQPDLVITPASPPQAPALAEALLAHPAFRSLEARA--RFVGMPNALWSCGTPLIAQAVARLAAATA 279
BLAST of mRNA_M-pyrifera_M_contig99055.22785.1 vs. uniprot
Match: UPI000CD3295F (ABC transporter substrate-binding protein n=1 Tax=Tabrizicola sp. XJSP TaxID=2030009 RepID=UPI000CD3295F) HSP 1 Score: 124 bits (311), Expect = 2.290e-31 Identity = 74/190 (38.95%), Postives = 107/190 (56.32%), Query Frame = 1 Query: 1 LQPDLVLTGVHTASGANDLLRRLGFNVLSFEPALDLDTFRASFRRLAAAIGASVRAERLLATMDRRIELSRQRTPTARPTAIIYRPNGFSPGFRSLAHDMLVAAGFRNLAQDFGIEYGGFVPLERLVVAAPDFVLL-DANPTDSPALADAILIHPALLKQRDRKHLRRIEIAEKYWTCGGTFIAEAIEHL 567 L PDLVL G TA +L+RLG V +F PA L R + A+G RA +LA D + + P RPTA Y NG++PG SL+ D++ AAGFR+LA + G+ GGF+PLE LV+AAPD V++ + P +S A + IL HPAL++ R + + ++ W CG + +A+ + Sbjct: 89 LNPDLVLAGTFTAGATVSMLKRLGIPVATFPPAASLAEVRQGMIDMGVALGQRDRAAAMLARFDAGLAEAAGAAPDDRPTAATYAANGYTPGGNSLSGDIIRAAGFRHLAAELGLTQGGFLPLEALVLAAPDLVVVGETYPGNSRA--EEILSHPALMQLRGGRET----LEDRDWVCGLPSVVDAVARM 272
BLAST of mRNA_M-pyrifera_M_contig99055.22785.1 vs. uniprot
Match: A0A1H8JS02_9RHOB (Iron complex transport system substrate-binding protein n=1 Tax=Paracoccus alcaliphilus TaxID=34002 RepID=A0A1H8JS02_9RHOB) HSP 1 Score: 123 bits (309), Expect = 3.970e-31 Identity = 76/191 (39.79%), Postives = 110/191 (57.59%), Query Frame = 1 Query: 1 LQPDLVLTGVHTASGANDLLRRLGFNVLSFEPALDLDTFRASFRRLAAAIGASVRAERLLATMDRRIELSRQRTPTAR-PTAIIYRPNGFSPGFRSLAHDMLVAAGFRNLAQDFGIEYGGFVPLERLVVAAPDFVLLDANPTDSPALADAILIHPALLKQRDRKHLRRIEIAEKYWTCGGTFIAEAIEHLA 570 +QPDLVL G +T+ A D+LRRL V F+ DLD R RR+ +G A+R++ D +L+R + P+A +Y NG+S G SLA +L+ AGFRN+A D GI +GGF+PLE LV+A PD V+LD+ + A+ I HPAL + + + + +++ W CG + AIE LA Sbjct: 82 MQPDLVLAGRYTSRTAVDMLRRLEVPVEEFDIVSDLDGLRHGIRRMGQVLGREAEAQRIIQGFD--ADLARLGDAEGKDPSAALYSANGYSSGDSSLAGQILLTAGFRNIAADAGIPFGGFLPLELLVLADPDLVVLDSR-NHGASRAEEIYDHPALRQVMAQSPVETV--SDRDWICGTPHVLRAIETLA 267 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99055.22785.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig99055.22785.1 >prot_M-pyrifera_M_contig99055.22785.1 ID=prot_M-pyrifera_M_contig99055.22785.1|Name=mRNA_M-pyrifera_M_contig99055.22785.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=196bp LQPDLVLTGVHTASGANDLLRRLGFNVLSFEPALDLDTFRASFRRLAAAIback to top mRNA from alignment at M-pyrifera_M_contig99055:102..689- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig99055.22785.1 ID=mRNA_M-pyrifera_M_contig99055.22785.1|Name=mRNA_M-pyrifera_M_contig99055.22785.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=588bp|location=Sequence derived from alignment at M-pyrifera_M_contig99055:102..689- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig99055:102..689- >mRNA_M-pyrifera_M_contig99055.22785.1 ID=mRNA_M-pyrifera_M_contig99055.22785.1|Name=mRNA_M-pyrifera_M_contig99055.22785.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1176bp|location=Sequence derived from alignment at M-pyrifera_M_contig99055:102..689- (Macrocystis pyrifera P11B4 male)back to top |