mRNA_M-pyrifera_M_contig98599.22701.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig98599.22701.1
Unique NamemRNA_M-pyrifera_M_contig98599.22701.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig98599.22701.1 vs. uniprot
Match: A0A3D4A3T0_9PLAN (Uroporphyrinogen decarboxylase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3D4A3T0_9PLAN)

HSP 1 Score: 367 bits (941), Expect = 3.150e-125
Identity = 178/231 (77.06%), Postives = 201/231 (87.01%), Query Frame = 1 
Query:    1 RAKTTFLELCKNPQLCAEIMLTAVERLGVDAAIIFSDLLPILEPMGLDLEFAKGEGPLIHNPVRESTDVDRVIELDSVESLDFVMETVRLTREQLPADIPLIGFAGAPFTLASYAIEGGSSRTFLHTKTLMYRDEGAWNELMERLSRSVTRYLNAQIAAGAQVVQLFDSWVGCLGPVDYRRYVLPHTQAIFAALPADVPAIHFAAGNPALLPSVVEAGGQVIGIDWRIDLD 693
            RAKTTFLELCKNPQLCAE+MLTAV +LGVDAAIIFSDLLPILEPMGLDLEFAKGEGP+IHNP+RESTD++RV+EL++V+SLDFVM+TV  TR+ LP D+PLIGFAGAPFTLASYAIEGGSSR +L+TKTLMYRD GAW+ELM R  R++T YLNAQIAAGAQ VQLFDSWVGCLGP DYRRYVLP+ Q I   L   VP I+F  GNPALLP   E G QV+G+DWR+ LD
Sbjct:   31 RAKTTFLELCKNPQLCAEVMLTAVTKLGVDAAIIFSDLLPILEPMGLDLEFAKGEGPVIHNPIRESTDINRVMELETVDSLDFVMQTVTETRKALPEDMPLIGFAGAPFTLASYAIEGGSSRNYLNTKTLMYRDPGAWHELMLRFQRAITIYLNAQIAAGAQCVQLFDSWVGCLGPDDYRRYVLPYVQGIIKDLVPGVPVINFGTGNPALLPLYAEGGSQVVGVDWRVRLD 261
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BLAST of mRNA_M-pyrifera_M_contig98599.22701.1 vs. uniprot
Match: A0A2E0AU43_9BACT (Uroporphyrinogen decarboxylase n=2 Tax=Planctomycetia TaxID=203683 RepID=A0A2E0AU43_9BACT)

HSP 1 Score: 372 bits (955), Expect = 3.190e-123
Identity = 180/231 (77.92%), Postives = 201/231 (87.01%), Query Frame = 1 
Query:    1 RAKTTFLELCKNPQLCAEIMLTAVERLGVDAAIIFSDLLPILEPMGLDLEFAKGEGPLIHNPVRESTDVDRVIELDSVESLDFVMETVRLTREQLPADIPLIGFAGAPFTLASYAIEGGSSRTFLHTKTLMYRDEGAWNELMERLSRSVTRYLNAQIAAGAQVVQLFDSWVGCLGPVDYRRYVLPHTQAIFAALPADVPAIHFAAGNPALLPSVVEAGGQVIGIDWRIDLD 693
            RAKTTFLELCKNPQLC+E+M TAV+RLGVDAAIIFSDLLPILEPMGLDLEFAKGEGP+IHNPVRE  DVDRV+EL+SV+SL FVMETV+ TR+ LPAD+PLIGFAGAPFTLASY IEGG+SR +LHTKTLMYRDEGAW  LMER +R++T YLNAQI AGAQ VQLFDSWVGCLGP DYR+YVLP+ Q I A L   VP I+F  GNPALLP + E G QV+G+DWRI LD
Sbjct:  335 RAKTTFLELCKNPQLCSEVMCTAVQRLGVDAAIIFSDLLPILEPMGLDLEFAKGEGPVIHNPVREPGDVDRVVELESVDSLHFVMETVQQTRQDLPADMPLIGFAGAPFTLASYVIEGGASRNYLHTKTLMYRDEGAWRSLMERFARAITIYLNAQIRAGAQCVQLFDSWVGCLGPDDYRKYVLPYVQRIIADLTTGVPVINFGTGNPALLPLLAEGGSQVVGVDWRIRLD 565
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BLAST of mRNA_M-pyrifera_M_contig98599.22701.1 vs. uniprot
Match: A0A257U602_9BACT (Uroporphyrinogen decarboxylase n=1 Tax=Planctomycetia bacterium 21-64-5 TaxID=1970542 RepID=A0A257U602_9BACT)

HSP 1 Score: 371 bits (952), Expect = 5.580e-123
Identity = 180/231 (77.92%), Postives = 203/231 (87.88%), Query Frame = 1 
Query:    1 RAKTTFLELCKNPQLCAEIMLTAVERLGVDAAIIFSDLLPILEPMGLDLEFAKGEGPLIHNPVRESTDVDRVIELDSVESLDFVMETVRLTREQLPADIPLIGFAGAPFTLASYAIEGGSSRTFLHTKTLMYRDEGAWNELMERLSRSVTRYLNAQIAAGAQVVQLFDSWVGCLGPVDYRRYVLPHTQAIFAALPADVPAIHFAAGNPALLPSVVEAGGQVIGIDWRIDLD 693
            RAKTTFL+LCKNP LCAE+M+TAV RLGVDAAIIFSDLLPILEPMG++LEFA GEGPLIHNPVRE+ DVDR++EL+SVE+LDFVMETVRLTR  +   IP+IGFAGAPFTLASYAIEGG+SR++LHTKTLMYRDE AWN LM RL+RSVTRYLNAQIAAGAQ VQLFDSWVGCLGP DYRRYVLPHT+ +   +   VP I+FA GNPAL+P + EAGG  IG+DWRI LD
Sbjct:  317 RAKTTFLDLCKNPALCAEVMITAVRRLGVDAAIIFSDLLPILEPMGMELEFAHGEGPLIHNPVREADDVDRLLELESVEALDFVMETVRLTRAGIDEKIPVIGFAGAPFTLASYAIEGGASRSYLHTKTLMYRDEPAWNALMGRLARSVTRYLNAQIAAGAQAVQLFDSWVGCLGPDDYRRYVLPHTKTVIDGIVPGVPLINFATGNPALVPQMAEAGGAAIGVDWRIRLD 547
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BLAST of mRNA_M-pyrifera_M_contig98599.22701.1 vs. uniprot
Match: UPI0019A3C0E8 (Uroporphyrinogen decarboxylase n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=UPI0019A3C0E8)

HSP 1 Score: 370 bits (949), Expect = 2.620e-122
Identity = 182/231 (78.79%), Postives = 198/231 (85.71%), Query Frame = 1 
Query:    1 RAKTTFLELCKNPQLCAEIMLTAVERLGVDAAIIFSDLLPILEPMGLDLEFAKGEGPLIHNPVRESTDVDRVIELDSVESLDFVMETVRLTREQLPADIPLIGFAGAPFTLASYAIEGGSSRTFLHTKTLMYRDEGAWNELMERLSRSVTRYLNAQIAAGAQVVQLFDSWVGCLGPVDYRRYVLPHTQAIFAALPADVPAIHFAAGNPALLPSVVEAGGQVIGIDWRIDLD 693
            R +TTFLELCKNPQLC+EIM TAV+RLGVDAAIIFSDLLPILEPMG++LEF+KGEGP+I+NPVR   DVDRV ELD + SLDFV ETVR TR  LP DIPLIGFAGAPFTLASYAIEGGSSR +LHTKTLMYRDEGAW  LMER  R++TRYLNAQIAAGAQ VQLFDSWVGCLGP DYRRYVLPH  AI   +   VP I+FAAGNPALLP + EAGG VIGIDWR+ LD
Sbjct:  336 RGQTTFLELCKNPQLCSEIMCTAVKRLGVDAAIIFSDLLPILEPMGMELEFSKGEGPVIYNPVRAPADVDRVKELDDIHSLDFVYETVRQTRADLPKDIPLIGFAGAPFTLASYAIEGGSSRNYLHTKTLMYRDEGAWRTLMERFVRAITRYLNAQIAAGAQCVQLFDSWVGCLGPDDYRRYVLPHVSAIIRGITPGVPVINFAAGNPALLPLLSEAGGAVIGIDWRVRLD 566
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BLAST of mRNA_M-pyrifera_M_contig98599.22701.1 vs. uniprot
Match: A0A2E8DBF1_9PLAN (Uroporphyrinogen decarboxylase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8DBF1_9PLAN)

HSP 1 Score: 369 bits (948), Expect = 3.610e-122
Identity = 178/231 (77.06%), Postives = 201/231 (87.01%), Query Frame = 1 
Query:    1 RAKTTFLELCKNPQLCAEIMLTAVERLGVDAAIIFSDLLPILEPMGLDLEFAKGEGPLIHNPVRESTDVDRVIELDSVESLDFVMETVRLTREQLPADIPLIGFAGAPFTLASYAIEGGSSRTFLHTKTLMYRDEGAWNELMERLSRSVTRYLNAQIAAGAQVVQLFDSWVGCLGPVDYRRYVLPHTQAIFAALPADVPAIHFAAGNPALLPSVVEAGGQVIGIDWRIDLD 693
            RAKTTFLELCKNPQLC+E+M+TAV +LGVDAAIIFSDLLPILEPMGLDLEFA+GEGP+IHNPVRE+ D+DRV+EL+SV+SL FV ETV+ TR  LP D+PLIGFAGAPFTLASYAIEGGSSRT+LHTKTLMYRDEGAW  LMER  R++T YLNAQIAAGAQ VQLFDSWVGCLGP DYRRYVLP+T+ I A +   VP I+F  GNPALLP + E G  V+GIDWR+ LD
Sbjct:  335 RAKTTFLELCKNPQLCSEVMVTAVNKLGVDAAIIFSDLLPILEPMGLDLEFAQGEGPVIHNPVREAADIDRVLELESVDSLHFVTETVKQTRADLPEDMPLIGFAGAPFTLASYAIEGGSSRTYLHTKTLMYRDEGAWRALMERFVRAITLYLNAQIAAGAQCVQLFDSWVGCLGPDDYRRYVLPYTREIIAGIVPGVPVINFGTGNPALLPLLAEGGSSVVGIDWRVRLD 565
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BLAST of mRNA_M-pyrifera_M_contig98599.22701.1 vs. uniprot
Match: A0A3D2V2W5_9PLAN (Uroporphyrinogen decarboxylase n=5 Tax=Planctomycetia TaxID=203683 RepID=A0A3D2V2W5_9PLAN)

HSP 1 Score: 367 bits (942), Expect = 3.320e-121
Identity = 178/231 (77.06%), Postives = 201/231 (87.01%), Query Frame = 1 
Query:    1 RAKTTFLELCKNPQLCAEIMLTAVERLGVDAAIIFSDLLPILEPMGLDLEFAKGEGPLIHNPVRESTDVDRVIELDSVESLDFVMETVRLTREQLPADIPLIGFAGAPFTLASYAIEGGSSRTFLHTKTLMYRDEGAWNELMERLSRSVTRYLNAQIAAGAQVVQLFDSWVGCLGPVDYRRYVLPHTQAIFAALPADVPAIHFAAGNPALLPSVVEAGGQVIGIDWRIDLD 693
            RAKTTFLELCKNPQLCAE+MLTAV +LGVDAAIIFSDLLPILEPMGLDLEFAKGEGP+IHNP+RESTD++RV+EL++V+SLDFVM+TV  TR+ LP D+PLIGFAGAPFTLASYAIEGGSSR +L+TKTLMYRD GAW+ELM R  R++T YLNAQIAAGAQ VQLFDSWVGCLGP DYRRYVLP+ Q I   L   VP I+F  GNPALLP   E G QV+G+DWR+ LD
Sbjct:  340 RAKTTFLELCKNPQLCAEVMLTAVTKLGVDAAIIFSDLLPILEPMGLDLEFAKGEGPVIHNPIRESTDINRVLELETVDSLDFVMQTVTETRKALPEDMPLIGFAGAPFTLASYAIEGGSSRNYLNTKTLMYRDPGAWHELMLRFQRAITIYLNAQIAAGAQCVQLFDSWVGCLGPDDYRRYVLPYVQGIIKDLVPGVPVINFGTGNPALLPLYAEGGSQVVGVDWRVRLD 570
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BLAST of mRNA_M-pyrifera_M_contig98599.22701.1 vs. uniprot
Match: A0A847GUU2_9BACT (Uroporphyrinogen decarboxylase n=1 Tax=Candidatus Anammoximicrobium sp. TaxID=2699742 RepID=A0A847GUU2_9BACT)

HSP 1 Score: 357 bits (917), Expect = 1.140e-120
Identity = 174/231 (75.32%), Postives = 197/231 (85.28%), Query Frame = 1 
Query:    1 RAKTTFLELCKNPQLCAEIMLTAVERLGVDAAIIFSDLLPILEPMGLDLEFAKGEGPLIHNPVRESTDVDRVIELDSVESLDFVMETVRLTREQLPADIPLIGFAGAPFTLASYAIEGGSSRTFLHTKTLMYRDEGAWNELMERLSRSVTRYLNAQIAAGAQVVQLFDSWVGCLGPVDYRRYVLPHTQAIFAALPADVPAIHFAAGNPALLPSVVEAGGQVIGIDWRIDLD 693
            RAKT FL+LCK+P LC+E+M TAV RLGVDAAIIFSDLLPILEPMGLDLEFA GEGP+IHNPVRE+ DVDRV EL+SV +LDFV+ETVR TR  LPA +PLIGFAGAPFTLASY IEGGSSR++LHTKTLMY D GAW ELM+RL+R++TRYLNAQI AGAQ VQLFDSWVGCLGP DYRR VLP+ Q I A L   VP I+FA GNPAL+P + E GG V+G+DWR+ LD
Sbjct:   94 RAKTGFLQLCKSPSLCSEVMCTAVARLGVDAAIIFSDLLPILEPMGLDLEFAAGEGPVIHNPVREAADVDRVRELESVAALDFVVETVRQTRRDLPAHLPLIGFAGAPFTLASYVIEGGSSRSYLHTKTLMYCDGGAWRELMQRLARAITRYLNAQIEAGAQCVQLFDSWVGCLGPDDYRRCVLPYVQQIIAGLTPGVPVINFATGNPALIPLLAEGGGSVVGVDWRVRLD 324
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BLAST of mRNA_M-pyrifera_M_contig98599.22701.1 vs. uniprot
Match: A0A2E3DHZ5_9PLAN (Uroporphyrinogen decarboxylase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E3DHZ5_9PLAN)

HSP 1 Score: 365 bits (938), Expect = 1.250e-120
Identity = 177/231 (76.62%), Postives = 202/231 (87.45%), Query Frame = 1 
Query:    1 RAKTTFLELCKNPQLCAEIMLTAVERLGVDAAIIFSDLLPILEPMGLDLEFAKGEGPLIHNPVRESTDVDRVIELDSVESLDFVMETVRLTREQLPADIPLIGFAGAPFTLASYAIEGGSSRTFLHTKTLMYRDEGAWNELMERLSRSVTRYLNAQIAAGAQVVQLFDSWVGCLGPVDYRRYVLPHTQAIFAALPADVPAIHFAAGNPALLPSVVEAGGQVIGIDWRIDLD 693
            R KTTFLELCK P LCAEIM+TAV +LGVDAAIIFSDLLPILEPMGLDLEFAKGEGP+IHNP+RES D+DRV+EL+SVESLDFVMETV+ TR +LPAD+PLIGF+GAPFTLASYAIEGGSSR +L+TKT+MYRDEGAW +LM+R  R++TRYLNAQIAAG Q VQLFDSW GCLG  DYRRYVLP+ Q I A +   VP I+FA GNPALLP + EAG +V+G+DWRI LD
Sbjct:  338 RNKTTFLELCKRPDLCAEIMVTAVTKLGVDAAIIFSDLLPILEPMGLDLEFAKGEGPVIHNPIRESKDIDRVMELESVESLDFVMETVKQTRLELPADMPLIGFSGAPFTLASYAIEGGSSRNYLNTKTIMYRDEGAWRKLMQRFVRAITRYLNAQIAAGVQCVQLFDSWAGCLGTDDYRRYVLPYLQEIIAGITPGVPVINFATGNPALLPLLAEAGTRVVGVDWRIRLD 568
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BLAST of mRNA_M-pyrifera_M_contig98599.22701.1 vs. uniprot
Match: A0A7Z9ICV3_9PLAN (Uroporphyrinogen decarboxylase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7Z9ICV3_9PLAN)

HSP 1 Score: 363 bits (933), Expect = 7.270e-120
Identity = 172/231 (74.46%), Postives = 201/231 (87.01%), Query Frame = 1 
Query:    1 RAKTTFLELCKNPQLCAEIMLTAVERLGVDAAIIFSDLLPILEPMGLDLEFAKGEGPLIHNPVRESTDVDRVIELDSVESLDFVMETVRLTREQLPADIPLIGFAGAPFTLASYAIEGGSSRTFLHTKTLMYRDEGAWNELMERLSRSVTRYLNAQIAAGAQVVQLFDSWVGCLGPVDYRRYVLPHTQAIFAALPADVPAIHFAAGNPALLPSVVEAGGQVIGIDWRIDLD 693
            R+KTTFLELCK+P+LC+EIM+TAV RLGVDAAIIFSDLLPILEPMGLDLEFAKGEGP+IHNP+RE+ D+DRV+EL+SVE+LDFVMETV+LTR++LPAD+PLIGF+GAPFTLASYAIEGGSSR +L+TKT+MYRD GAW ELM R  R++TRYLNAQIAAG Q VQLFDSW GCLG  DYR YVLP+ Q I A L   +P I+FA GNP LLP + E G  V+G+DWR+ LD
Sbjct:  339 RSKTTFLELCKSPELCSEIMVTAVNRLGVDAAIIFSDLLPILEPMGLDLEFAKGEGPVIHNPIREAADIDRVVELESVEALDFVMETVKLTRQELPADMPLIGFSGAPFTLASYAIEGGSSRNYLNTKTIMYRDPGAWKELMGRFVRAITRYLNAQIAAGVQCVQLFDSWAGCLGTDDYREYVLPYVQEIIAGLVPGIPVINFATGNPGLLPMLAEGGNCVVGVDWRVRLD 569
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BLAST of mRNA_M-pyrifera_M_contig98599.22701.1 vs. uniprot
Match: A0A2E6WBR3_9BACT (Uroporphyrinogen decarboxylase n=3 Tax=Planctomycetia TaxID=203683 RepID=A0A2E6WBR3_9BACT)

HSP 1 Score: 363 bits (931), Expect = 1.410e-119
Identity = 176/231 (76.19%), Postives = 201/231 (87.01%), Query Frame = 1 
Query:    1 RAKTTFLELCKNPQLCAEIMLTAVERLGVDAAIIFSDLLPILEPMGLDLEFAKGEGPLIHNPVRESTDVDRVIELDSVESLDFVMETVRLTREQLPADIPLIGFAGAPFTLASYAIEGGSSRTFLHTKTLMYRDEGAWNELMERLSRSVTRYLNAQIAAGAQVVQLFDSWVGCLGPVDYRRYVLPHTQAIFAALPADVPAIHFAAGNPALLPSVVEAGGQVIGIDWRIDLD 693
            R KTTFLELCK P LCAEIM+TAV +LGVDAAIIFSDLLPILEPMGLDLEFAKGEGP+IHNP+RE  D++R++EL+SVESLDFVMETV+ TR +LPAD+PLIGF+GAPFTLASYAIEGGSSR +L+TKT+MYRDEGAW ELM R  R++TRYLNAQIAAGAQ VQLFDSW GCLG  DYRRYVLP+ Q I A L   VP I+FA GNPALLP + EAG +V+G+DWR+ LD
Sbjct:  338 RNKTTFLELCKRPDLCAEIMVTAVTKLGVDAAIIFSDLLPILEPMGLDLEFAKGEGPVIHNPIREIKDIERIMELESVESLDFVMETVKQTRLELPADMPLIGFSGAPFTLASYAIEGGSSRNYLNTKTIMYRDEGAWKELMLRFVRAITRYLNAQIAAGAQCVQLFDSWAGCLGTDDYRRYVLPYIQEIIAGLTPGVPVINFATGNPALLPLLAEAGTRVVGVDWRVRLD 568
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98599.22701.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D4A3T0_9PLAN3.150e-12577.06Uroporphyrinogen decarboxylase n=1 Tax=Planctomyce... [more]
A0A2E0AU43_9BACT3.190e-12377.92Uroporphyrinogen decarboxylase n=2 Tax=Planctomyce... [more]
A0A257U602_9BACT5.580e-12377.92Uroporphyrinogen decarboxylase n=1 Tax=Planctomyce... [more]
UPI0019A3C0E82.620e-12278.79Uroporphyrinogen decarboxylase n=1 Tax=Pirellulace... [more]
A0A2E8DBF1_9PLAN3.610e-12277.06Uroporphyrinogen decarboxylase n=1 Tax=Planctomyce... [more]
A0A3D2V2W5_9PLAN3.320e-12177.06Uroporphyrinogen decarboxylase n=5 Tax=Planctomyce... [more]
A0A847GUU2_9BACT1.140e-12075.32Uroporphyrinogen decarboxylase n=1 Tax=Candidatus ... [more]
A0A2E3DHZ5_9PLAN1.250e-12076.62Uroporphyrinogen decarboxylase n=1 Tax=Planctomyce... [more]
A0A7Z9ICV3_9PLAN7.270e-12074.46Uroporphyrinogen decarboxylase n=1 Tax=Planctomyce... [more]
A0A2E6WBR3_9BACT1.410e-11976.19Uroporphyrinogen decarboxylase n=3 Tax=Planctomyce... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig98599contigM-pyrifera_M_contig98599:2..694 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score358.6
Seed ortholog evalue2.2e-96
Seed eggNOG ortholog530564.Psta_0166
Preferred namehemE
KEGG rclassRC00003,RC00871,RC00872,RC01861
KEGG koko:K01599,ko:K01719,ko:K13542
KEGG ReactionR03165,R03194,R03197,R04972
KEGG Pathwayko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120
KEGG ModuleM00121
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
EggNOG OGs2IXZG@203682,COG0407@1,COG0407@2,COG1587@1,COG1587@2
EC2.1.1.107,4.1.1.37,4.2.1.75
COG Functional cat.H
BiGG ReactioniAF987.Gmet_0016
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size693
Cds size693
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816903.2710176-CDS-M-pyrifera_M_contig98599:1..6941622816903.2710176-CDS-M-pyrifera_M_contig98599:1..694Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig98599 2..694 +
1692278246.2132063-CDS-M-pyrifera_M_contig98599:1..6941692278246.2132063-CDS-M-pyrifera_M_contig98599:1..694Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig98599 2..694 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig98599.22701.1prot_M-pyrifera_M_contig98599.22701.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig98599 2..694 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig98599.22701.1

>prot_M-pyrifera_M_contig98599.22701.1 ID=prot_M-pyrifera_M_contig98599.22701.1|Name=mRNA_M-pyrifera_M_contig98599.22701.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=231bp
RAKTTFLELCKNPQLCAEIMLTAVERLGVDAAIIFSDLLPILEPMGLDLE
FAKGEGPLIHNPVRESTDVDRVIELDSVESLDFVMETVRLTREQLPADIP
LIGFAGAPFTLASYAIEGGSSRTFLHTKTLMYRDEGAWNELMERLSRSVT
RYLNAQIAAGAQVVQLFDSWVGCLGPVDYRRYVLPHTQAIFAALPADVPA
IHFAAGNPALLPSVVEAGGQVIGIDWRIDLD
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mRNA from alignment at M-pyrifera_M_contig98599:2..694+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig98599.22701.1 ID=mRNA_M-pyrifera_M_contig98599.22701.1|Name=mRNA_M-pyrifera_M_contig98599.22701.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=693bp|location=Sequence derived from alignment at M-pyrifera_M_contig98599:2..694+ (Macrocystis pyrifera P11B4 male)
CGGGCAAAGACAACCTTTCTAGAGTTGTGCAAGAACCCGCAACTGTGCGC
CGAAATCATGCTCACGGCCGTCGAACGCTTGGGCGTCGATGCGGCCATCA
TTTTTTCAGACTTACTCCCCATCCTCGAACCGATGGGGTTGGATCTGGAG
TTTGCCAAGGGCGAAGGACCGCTGATCCACAACCCGGTGCGCGAGTCGAC
CGACGTCGATCGCGTAATCGAGCTGGATAGCGTCGAGTCGCTGGACTTCG
TGATGGAAACAGTTCGATTAACCCGCGAACAACTTCCCGCCGACATTCCA
TTGATTGGATTCGCGGGAGCCCCGTTCACGCTGGCCAGCTATGCGATCGA
GGGTGGTTCAAGTCGCACCTTTCTGCACACCAAGACGCTGATGTACAGGG
ACGAGGGTGCCTGGAATGAGTTGATGGAGCGATTGAGCCGCTCGGTGACT
CGCTACCTTAACGCACAAATCGCTGCCGGCGCGCAGGTCGTGCAGTTGTT
CGACAGTTGGGTCGGCTGTTTGGGGCCCGTCGATTATCGCCGCTATGTTT
TGCCGCACACGCAAGCAATCTTCGCCGCACTTCCGGCAGATGTTCCGGCC
ATTCACTTCGCGGCGGGCAACCCGGCGCTGTTACCGTCGGTTGTCGAGGC
CGGAGGGCAAGTGATCGGCATCGATTGGCGAATCGATCTCGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig98599:2..694+

>mRNA_M-pyrifera_M_contig98599.22701.1 ID=mRNA_M-pyrifera_M_contig98599.22701.1|Name=mRNA_M-pyrifera_M_contig98599.22701.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1386bp|location=Sequence derived from alignment at M-pyrifera_M_contig98599:2..694+ (Macrocystis pyrifera P11B4 male)
CGGGCAAAGACAACCTTTCTAGAGTTGTGCAAGAACCCGCAACTGTGCGC
CGAAATCATGCTCACGGCCGTCGAACGCTTGGGCGTCGATGCGGCCATCA
TTTTTTCAGACTTACTCCCCATCCTCGAACCGATGGGGTTGGATCTGGAG
TTTGCCAAGGGCGAAGGACCGCTGATCCACAACCCGGTGCGCGAGTCGAC
CGACGTCGATCGCGTAATCGAGCTGGATAGCGTCGAGTCGCTGGACTTCG
TGATGGAAACAGTTCGATTAACCCGCGAACAACTTCCCGCCGACATTCCA
TTGATTGGATTCGCGGGAGCCCCGTTCACGCTGGCCAGCTATGCGATCGA
GGGTGGTTCAAGTCGCACCTTTCTGCACACCAAGACGCTGATGTACAGGG
ACGAGGGTGCCTGGAATGAGTTGATGGAGCGATTGAGCCGCTCGGTGACT
CGCTACCTTAACGCACAAATCGCTGCCGGCGCGCAGGTCGTGCAGTTGTT
CGACAGTTGGGTCGGCTGTTTGGGGCCCGTCGATTATCGCCGCTATGTTT
TGCCGCACACGCAAGCAATCTTCGCCGCACTTCCGGCAGATGTTCCGGCC
ATTCACTTCGCGGCGGGCAACCCGGCGCTGTTACCGTCGGTTGTCGAGGC
CGGAGGGCAAGTGATCGGCATCGATTGGCGAATCGATCTCGACCGGGCAA
AGACAACCTTTCTAGAGTTGTGCAAGAACCCGCAACTGTGCGCCGAAATC
ATGCTCACGGCCGTCGAACGCTTGGGCGTCGATGCGGCCATCATTTTTTC
AGACTTACTCCCCATCCTCGAACCGATGGGGTTGGATCTGGAGTTTGCCA
AGGGCGAAGGACCGCTGATCCACAACCCGGTGCGCGAGTCGACCGACGTC
GATCGCGTAATCGAGCTGGATAGCGTCGAGTCGCTGGACTTCGTGATGGA
AACAGTTCGATTAACCCGCGAACAACTTCCCGCCGACATTCCATTGATTG
GATTCGCGGGAGCCCCGTTCACGCTGGCCAGCTATGCGATCGAGGGTGGT
TCAAGTCGCACCTTTCTGCACACCAAGACGCTGATGTACAGGGACGAGGG
TGCCTGGAATGAGTTGATGGAGCGATTGAGCCGCTCGGTGACTCGCTACC
TTAACGCACAAATCGCTGCCGGCGCGCAGGTCGTGCAGTTGTTCGACAGT
TGGGTCGGCTGTTTGGGGCCCGTCGATTATCGCCGCTATGTTTTGCCGCA
CACGCAAGCAATCTTCGCCGCACTTCCGGCAGATGTTCCGGCCATTCACT
TCGCGGCGGGCAACCCGGCGCTGTTACCGTCGGTTGTCGAGGCCGGAGGG
CAAGTGATCGGCATCGATTGGCGAATCGATCTCGAC
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