mRNA_M-pyrifera_M_contig98596.22700.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig98596.22700.1
Unique NamemRNA_M-pyrifera_M_contig98596.22700.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig98596.22700.1 vs. uniprot
Match: A0A6N9EQL5_9ACTN (UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9EQL5_9ACTN)

HSP 1 Score: 261 bits (666), Expect = 4.990e-82
Identity = 144/230 (62.61%), Postives = 168/230 (73.04%), Query Frame = 1
Query:    1 APDDTEALVLEMGARGPGHIAHLCAIGRPTVGIVTTVGTAHTSEFGSVEAVAEAKGELIESLPAAADGGVAVLNADLPLVTAMASRTAAAIVGFGRDGDVRAESITLDDELVPTFTLVTPQGRAEVVLGARGVHLVDNALAAAAAALAVGVPLETVVDGLAQPVLSPMRMALVTSPRGLRILDDSYNANPMSTEAALRSLVALPVDPGARRVAVLGEMAELGEISAAAHA 690
            APD TEA+V+EMG+RGPGHIA LC I RP++G+VTTVG +HTSE GS+ AV  AK EL+ESLPAAADGGVA LNA +P V AMA  T A +V FG  G V AES+ LDD+L P F L +P G  +V LGARGVH VDNALAAAA  L +GV L  V  GLA P LSP+RM +V S  G R+L+D YNANP+S  AAL +L ALP +   RR+AVLG MAELGE  A  HA
Sbjct:  149 APDGTEAVVVEMGSRGPGHIAELCRIARPSMGVVTTVGLSHTSELGSLAAVVSAKQELVESLPAAADGGVAFLNAGVPEVAAMAETTQARVVTFGDGGQVSAESLELDDDLTPRFVLHSPSGEIDVELGARGVHSVDNALAAAAVGLELGVSLAGVAAGLATPTLSPLRMEVVRSAEGARLLNDCYNANPLSMRAALHALAALPAE---RRIAVLGTMAELGEFEAQEHA 375          
BLAST of mRNA_M-pyrifera_M_contig98596.22700.1 vs. uniprot
Match: A0A6B1E5X9_9ACTN (UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1E5X9_9ACTN)

HSP 1 Score: 258 bits (658), Expect = 7.730e-81
Identity = 143/232 (61.64%), Postives = 167/232 (71.98%), Query Frame = 1
Query:    1 APDDTEALVLEMGARGPGHIAHLCAIGRPTVGIVTTVGTAHTSEFGSVEAVAEAKGELIESLPAAADGGVAVLNADLPLVTAMASRTAAAIVGFGRDGDVRAESITLDDELVPTFTLVTPQGRAEVVLGARGVHLVDNALAAAAAALAVGVPLETVVDGLAQPVLSPMRMALVTSPRGLRILDDSYNANPMSTEAALRSLVALPVDPGARRVAVLGEMAELGEISAAAHARL 696
            APD TEALV+EMG+RGPGHIA LC I RP +G+VT VG +HTSE GS+ AV  AK EL+ESLPA A GGVA LNA +P V AMA  T A +V FG  G V A S+ LDD+L P F L +PQG  +V LGARGVH VDNALAAAA  L +GV LE V  GLA P LSP+RM ++ +  G R+L+DSYNANP+S  AAL +L ALP     RR+AVLG MAELGE  AA HA +
Sbjct:  149 APDGTEALVVEMGSRGPGHIAELCRIARPIMGVVTAVGLSHTSELGSLAAVVSAKQELVESLPAGAAGGVAFLNAGVPEVAAMAEATEARVVTFGDGGQVSARSLELDDKLTPRFVLHSPQGEIDVELGARGVHSVDNALAAAAVGLELGVSLEDVAAGLATPTLSPLRMEVLRTAEGARLLNDSYNANPLSMRAALHALAALPAK---RRIAVLGAMAELGEFEAAEHAAI 377          
BLAST of mRNA_M-pyrifera_M_contig98596.22700.1 vs. uniprot
Match: A0A7K2APD1_9ACTN (UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2APD1_9ACTN)

HSP 1 Score: 257 bits (656), Expect = 1.590e-80
Identity = 138/230 (60.00%), Postives = 168/230 (73.04%), Query Frame = 1
Query:    1 APDDTEALVLEMGARGPGHIAHLCAIGRPTVGIVTTVGTAHTSEFGSVEAVAEAKGELIESLPAAADGGVAVLNADLPLVTAMASRTAAAIVGFGRDGDVRAESITLDDELVPTFTLVTPQGRAEVVLGARGVHLVDNALAAAAAALAVGVPLETVVDGLAQPVLSPMRMALVTSPRGLRILDDSYNANPMSTEAALRSLVALPVDPGARRVAVLGEMAELGEISAAAHA 690
            APDD EALV+EMG+RGPGHIA LC + RPT+G++TTVG +HTSE GS+ AV  AK EL+E LPAAADGGVA LNA +P V AMA  T A +V +G  G+V A+S+ LDDEL P F L +P G   V LGARG H VDNALAAAA  + +GV L+ V  GLA+P LSP+RM ++ +  G R+L+D YNANP+S  AAL +L ALP     RR+AVLG MAELG+  AA HA
Sbjct:  149 APDDAEALVVEMGSRGPGHIAELCRVARPTMGVITTVGLSHTSELGSLGAVVSAKRELVEGLPAAADGGVAFLNAGVPEVAAMAHGTEARVVTYGDGGEVSAQSLELDDELTPRFVLHSPSGEVAVELGARGAHSVDNALAAAAVGIELGVSLDDVAAGLAEPTLSPLRMEVMRTAGGARLLNDCYNANPLSMRAALHALAALPAQ---RRIAVLGTMAELGDFEAAEHA 375          
BLAST of mRNA_M-pyrifera_M_contig98596.22700.1 vs. uniprot
Match: A0A7K2BSX9_9ACTN (UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2BSX9_9ACTN)

HSP 1 Score: 254 bits (649), Expect = 1.790e-79
Identity = 139/232 (59.91%), Postives = 167/232 (71.98%), Query Frame = 1
Query:    1 APDDTEALVLEMGARGPGHIAHLCAIGRPTVGIVTTVGTAHTSEFGSVEAVAEAKGELIESLPAAADGGVAVLNADLPLVTAMASRTAAAIVGFGRDGDVRAESITLDDELVPTFTLVTPQGRAEVVLGARGVHLVDNALAAAAAALAVGVPLETVVDGLAQPVLSPMRMALVTSPRGLRILDDSYNANPMSTEAALRSLVALPVDPGARRVAVLGEMAELGEISAAAHARL 696
            APDD EALV+EMG+RGP HI  LC + RPT+G++TTVG +HTSE GS+ AV  AK EL+ESLPAAADGGVA LNA +P V AMA+ T A +V FG  GDV A ++ LDD+L   F L +P G  +V LGARGVH VDNALAAAA  L +GV LE V  GLA P LSP+RM +V +  G ++L+D YNANP+S  AAL SL ALP     RR+AVLG M ELG+  AA HA +
Sbjct:  149 APDDAEALVVEMGSRGPSHITELCRVARPTMGVITTVGLSHTSELGSLAAVVSAKRELVESLPAAADGGVAFLNAGVPEVAAMATATEARMVTFGDGGDVSARNLELDDDLTTRFVLHSPSGEIDVALGARGVHSVDNALAAAAVGLELGVCLEDVAAGLAAPTLSPLRMEVVRTAGGAQLLNDCYNANPVSMRAALHSLAALPAQ---RRIAVLGPMVELGDFEAAEHAAI 377          
BLAST of mRNA_M-pyrifera_M_contig98596.22700.1 vs. uniprot
Match: A0A354BAS4_9ACTN (UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A354BAS4_9ACTN)

HSP 1 Score: 251 bits (640), Expect = 2.970e-78
Identity = 142/232 (61.21%), Postives = 171/232 (73.71%), Query Frame = 1
Query:    1 APDDTEALVLEMGARGPGHIAHLCAIGRPTVGIVTTVGTAHTSEFGSVEAVAEAKGELIESLPAAADGGVAVLNADLPLVTAMASRTAAAIVGFGRDGDVRAESITLDDELVPTFTLVTPQGRAEVVLGARGVHLVDNALAAAAAALAVGVPLETVVDGLAQPVLSPMRMALVTSPRGLRILDDSYNANPMSTEAALRSLVALPVDPGARRVAVLGEMAELGEISAAAHARL 696
            APDD+ A+VLEMGARG GHIA LC   RPTVGIVTTVG AHTSEFGSVEAVA  KGEL+ESLP     G AVLNAD P V +MA RT A++V FG  G+VRAESIT+ ++L+P+F LV+P G   V LG +G HL+ NALAAA+AAL +GV LE +  GL +P  SPMRMA+ T+P G RI+DD+YNANP+S   A+ +L A+      R+VAVLG MAELGE S   H R+
Sbjct:  151 APDDSRAVVLEMGARGVGHIATLCRTARPTVGIVTTVGKAHTSEFGSVEAVALGKGELVESLPVE---GFAVLNADNPAVASMADRTEASVVTFGDAGEVRAESITIAEDLIPSFRLVSPWGAVNVRLGVQGDHLIPNALAAASAALPLGVSLEHLAAGLEEPDRSPMRMAMKTAPSGARIIDDTYNANPLSVAGAIEALAAVTAG---RKVAVLGVMAELGESSRTDHERM 376          
BLAST of mRNA_M-pyrifera_M_contig98596.22700.1 vs. uniprot
Match: A0A6B0WMR7_9ACTN (UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0WMR7_9ACTN)

HSP 1 Score: 253 bits (646), Expect = 3.460e-78
Identity = 137/231 (59.31%), Postives = 168/231 (72.73%), Query Frame = 1
Query:    4 PDDTEALVLEMGARGPGHIAHLCAIGRPTVGIVTTVGTAHTSEFGSVEAVAEAKGELIESLPAAADGGVAVLNADLPLVTAMASRTAAAIVGFGRDGDVRAESITLDDELVPTFTLVTPQGRAEVVLGARGVHLVDNALAAAAAALAVGVPLETVVDGLAQPVLSPMRMALVTSPRGLRILDDSYNANPMSTEAALRSLVALPVDPGARRVAVLGEMAELGEISAAAHARL 696
            PDD EALV+EMG+RGPGHIA LC   RPT+G++TTVG +HTSE GS+ AV  AK EL+ESLPAAADGGVA LNA +P V AMA+ T A +V FG  G+V A  + LDD+L P F L +  G  EV LGARG+H VDNALAAAA  + +GV L+ V  GLA+P LSP+RM ++ +  G R+L+D YNANP+S  AAL +L ALP     RR+AVLG MAELG+  AA HA +
Sbjct:  224 PDDAEALVVEMGSRGPGHIAELCRAARPTMGVITTVGLSHTSELGSLAAVVSAKRELVESLPAAADGGVAFLNAGVPEVAAMAAATDARVVTFGDGGEVSARGLKLDDDLTPRFVLHSRLGEVEVKLGARGLHSVDNALAAAAVGIELGVSLKDVAAGLAEPTLSPLRMEILRTAGGARLLNDCYNANPLSMRAALHALAALPAQ---RRIAVLGTMAELGDFEAAEHAAI 451          
BLAST of mRNA_M-pyrifera_M_contig98596.22700.1 vs. uniprot
Match: A0A7K2A314_9ACTN (UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2A314_9ACTN)

HSP 1 Score: 248 bits (632), Expect = 6.360e-77
Identity = 137/230 (59.57%), Postives = 166/230 (72.17%), Query Frame = 1
Query:    1 APDDTEALVLEMGARGPGHIAHLCAIGRPTVGIVTTVGTAHTSEFGSVEAVAEAKGELIESLPAAADGGVAVLNADLPLVTAMASRTAAAIVGFGRDGDVRAESITLDDELVPTFTLVTPQGRAEVVLGARGVHLVDNALAAAAAALAVGVPLETVVDGLAQPVLSPMRMALVTSPRGLRILDDSYNANPMSTEAALRSLVALPVDPGARRVAVLGEMAELGEISAAAHA 690
            APDD EALV+EMG+RG GHIA LC + +PT+G+VTTVG +HTS  GS+ AV  AK EL+E LPAAADGGVA LNA +P V AMA  TAA +V +G  G+V+A  +TLDDEL P F L +P G   V LGARG H VDNALAAAA    +GV L+ V  GLA+P LSP+RM ++ +  G R+L+D YNANP+S  AAL +L ALP     RR+AVLG MAELG+  AA HA
Sbjct:  149 APDDAEALVVEMGSRGAGHIAELCRVAQPTMGVVTTVGLSHTSALGSLAAVVSAKRELVEGLPAAADGGVAFLNAGVPEVAAMAQGTAARVVTYGDGGEVQAGDLTLDDELTPRFVLRSPGGEVPVRLGARGAHSVDNALAAAAVGGELGVSLKDVAAGLAEPTLSPLRMEVLKTVGGARLLNDCYNANPLSMRAALHALAALPAR---RRIAVLGVMAELGDFEAAEHA 375          
BLAST of mRNA_M-pyrifera_M_contig98596.22700.1 vs. uniprot
Match: A0A6J4IIV1_9ACTN (UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=uncultured Acidimicrobiales bacterium TaxID=310071 RepID=A0A6J4IIV1_9ACTN)

HSP 1 Score: 242 bits (618), Expect = 5.070e-75
Identity = 138/232 (59.48%), Postives = 166/232 (71.55%), Query Frame = 1
Query:    4 PDDTEALVLEMGARGPGHIAHLCAIGRPTVGIVTTVGTAHTSEFGSVEAVAEAKGELIESLPAAADGGVAVLNADLPLVTAMASRTAAAIVGFG-RDGDVRAESITLDDELVPTFTLVTPQGRAEVVLGARGVHLVDNALAAAAAALAVGVPLETVVDGLAQPVLSPMRMALVTSPRGLRILDDSYNANPMSTEAALRSLVALPVDPGARRVAVLGEMAELGEISAAAHARL 696
            PDDTE +V+EMGARG GH+A LCA+ RP VG+VTTVG +H   FG+VE +A AKGEL+E+LP   + G AVLNAD+PLV AMA R AA +V FG   GDVRAE +TLD++L P+F L +P G A V L  RG H V NALAAAAAALA   P+E V  GL    LSP RM L  +P G  +L+D+YNANP+S EAALR L ALP +   RR A+LG MAELGE+  A HAR+
Sbjct:  146 PDDTEVVVVEMGARGKGHVAALCAVARPLVGVVTTVGVSHAEFFGTVEDIARAKGELVEALP---EEGTAVLNADVPLVAAMAMRAAARVVTFGLATGDVRAERVTLDEDLRPSFLLRSPWGDAPVSLAVRGHHQVANALAAAAAALACETPMEDVAAGLGDAHLSPWRMQLERAPSGALVLNDTYNANPLSMEAALRGLAALPAE---RRTALLGVMAELGEVGPAEHARV 371          
BLAST of mRNA_M-pyrifera_M_contig98596.22700.1 vs. uniprot
Match: A0A6L7K579_9ACTN (UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6L7K579_9ACTN)

HSP 1 Score: 241 bits (615), Expect = 1.430e-74
Identity = 140/232 (60.34%), Postives = 171/232 (73.71%), Query Frame = 1
Query:    4 PDDTEALVLEMGARGPGHIAHLCAIGRPTVGIVTTVGTAHTSEFGSVEAVAEAKGELIESLPAAADGGVAVLNADLPLVTAMASRTAAAIVGFGR-DGDVRAESITLDDELVPTFTLVTPQGRAEVVLGARGVHLVDNALAAAAAALAVGVPLETVVDGLAQPVLSPMRMALVTSPRGLRILDDSYNANPMSTEAALRSLVALPVDPGARRVAVLGEMAELGEISAAAHARL 696
            P++ EA+V+EMGARG GHIA LC++ RPTVG+VT+VG AHT  FG+VEAVAEAKGEL+ESL A+   GVAVLNAD PLV AMA RT AA++ FGR  GDVRA +++LDD L P F L TP+G+A+V L   G H+VDNALAAAAAALAVG  +E +  GL    LSP RM +     G  +++D+YNANPMS  A LRSL A+      RRVAVLG MAELG+ +AA HA +
Sbjct:  146 PEEAEAVVVEMGARGKGHIAWLCSMARPTVGVVTSVGAAHTELFGTVEAVAEAKGELVESLDAS---GVAVLNADQPLVAAMADRTEAAVLAFGRAGGDVRASAVSLDDGLCPRFRLETPRGQADVALAVCGEHMVDNALAAAAAALAVGEGVEEIAAGLGSAQLSPWRMEVTELASGAVLINDAYNANPMSMAAGLRSLAAVDRP---RRVAVLGVMAELGDRAAAEHAAI 371          
BLAST of mRNA_M-pyrifera_M_contig98596.22700.1 vs. uniprot
Match: A0A3M2GTI5_ACTSX (UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GTI5_ACTSX)

HSP 1 Score: 239 bits (610), Expect = 4.420e-74
Identity = 140/231 (60.61%), Postives = 164/231 (71.00%), Query Frame = 1
Query:    4 PDDTEALVLEMGARGPGHIAHLCAIGRPTVGIVTTVGTAHTSEFGSVEAVAEAKGELIESLPAAADGGVAVLNADLPLVTAMASRTAAAIVGFGRDGDVRAESITLDDELVPTFTLVTPQGRAEVVLGARGVHLVDNALAAAAAALAVGVPLETVVDGLAQPVLSPMRMALVTSPRGLRILDDSYNANPMSTEAALRSLVALPVDPGARRVAVLGEMAELGEISAAAHARL 696
            P D EA+V+EMGARG GHIA LCA+ RP +G+VTTVG AHT EFGSV+AVA AK EL+E+LP+    G AVLNAD+  V AMA RTAA +V FG  G+VRA  + LDDEL P F L +P G AEV L  RG HLV NALAAAA  L +G+  ETV  GLA  V+S  RM LV +  G R+LDD+YNANP+S  AALR+L  LP    ARRVAVLG MAELG+   A HA +
Sbjct:  153 PGDVEAVVVEMGARGRGHIADLCAVARPRIGVVTTVGAAHTGEFGSVDAVATAKAELVEALPSE---GCAVLNADVAAVAAMADRTAAEVVTFGDRGEVRARELVLDDELRPRFRLESPWGGAEVRLTTRGAHLVPNALAAAAVGLHLGLGPETVAAGLADAVVSAGRMHLVRTSTGARVLDDTYNANPLSVAAALRALAHLPA---ARRVAVLGVMAELGDRGPADHAAM 377          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98596.22700.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6N9EQL5_9ACTN4.990e-8262.61UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin... [more]
A0A6B1E5X9_9ACTN7.730e-8161.64UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin... [more]
A0A7K2APD1_9ACTN1.590e-8060.00UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin... [more]
A0A7K2BSX9_9ACTN1.790e-7959.91UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin... [more]
A0A354BAS4_9ACTN2.970e-7861.21UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin... [more]
A0A6B0WMR7_9ACTN3.460e-7859.31UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin... [more]
A0A7K2A314_9ACTN6.360e-7759.57UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin... [more]
A0A6J4IIV1_9ACTN5.070e-7559.48UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin... [more]
A0A6L7K579_9ACTN1.430e-7460.34UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin... [more]
A0A3M2GTI5_ACTSX4.420e-7460.61UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig98596contigM-pyrifera_M_contig98596:2..697 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score228.4
Seed ortholog evalue3.4e-57
Seed eggNOG ortholog1075090.GOAMR_20_02510
Preferred namemurF
KEGG rclassRC00064,RC00141,RC01012
KEGG koko:K01772,ko:K01929
KEGG ReactionR00310,R04573,R04617,R11329
KEGG Pathwayko00300,ko00550,ko00860,ko01100,ko01110,ko01502,map00300,map00550,map00860,map01100,map01110,map01502
KEGG ModuleM00121
Hectar predicted targeting categoryother localisation
GOsGO:0008150,GO:0040007
EggNOG free text desc.Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
EggNOG OGs2GK0Y@201174,4GA43@85026,COG0770@1,COG0770@2
EC4.99.1.1,4.99.1.9,6.3.2.10
COG Functional cat.M
Best tax levelGordoniaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01011
Exons1
Model size696
Cds size696
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816903.2305737-CDS-M-pyrifera_M_contig98596:1..6971622816903.2305737-CDS-M-pyrifera_M_contig98596:1..697Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig98596 2..697 +
1692278246.1974874-CDS-M-pyrifera_M_contig98596:1..6971692278246.1974874-CDS-M-pyrifera_M_contig98596:1..697Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig98596 2..697 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig98596.22700.1prot_M-pyrifera_M_contig98596.22700.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig98596 2..697 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig98596.22700.1

>prot_M-pyrifera_M_contig98596.22700.1 ID=prot_M-pyrifera_M_contig98596.22700.1|Name=mRNA_M-pyrifera_M_contig98596.22700.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=232bp
APDDTEALVLEMGARGPGHIAHLCAIGRPTVGIVTTVGTAHTSEFGSVEA
VAEAKGELIESLPAAADGGVAVLNADLPLVTAMASRTAAAIVGFGRDGDV
RAESITLDDELVPTFTLVTPQGRAEVVLGARGVHLVDNALAAAAAALAVG
VPLETVVDGLAQPVLSPMRMALVTSPRGLRILDDSYNANPMSTEAALRSL
VALPVDPGARRVAVLGEMAELGEISAAAHARL
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mRNA from alignment at M-pyrifera_M_contig98596:2..697+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig98596.22700.1 ID=mRNA_M-pyrifera_M_contig98596.22700.1|Name=mRNA_M-pyrifera_M_contig98596.22700.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=696bp|location=Sequence derived from alignment at M-pyrifera_M_contig98596:2..697+ (Macrocystis pyrifera P11B4 male)
GCGCCCGACGACACCGAGGCGTTGGTGCTCGAGATGGGCGCCCGCGGGCC GGGCCACATCGCCCACCTGTGTGCGATCGGTCGCCCCACGGTCGGCATCG TGACCACCGTCGGCACCGCCCACACCAGCGAGTTCGGCTCGGTCGAGGCG GTCGCCGAAGCCAAGGGCGAGCTCATCGAGTCGCTCCCCGCGGCCGCCGA CGGGGGAGTGGCCGTGCTCAACGCCGACCTCCCCCTGGTGACGGCGATGG CCTCGCGCACCGCCGCCGCCATCGTGGGGTTCGGCCGCGACGGCGACGTG CGGGCCGAGTCGATCACCCTCGACGACGAGCTGGTCCCGACCTTCACCCT CGTCACGCCCCAGGGTCGAGCCGAGGTCGTGCTCGGCGCCCGTGGCGTGC ACCTGGTCGACAACGCACTCGCCGCTGCTGCCGCCGCCCTCGCCGTGGGT GTGCCTCTCGAGACCGTGGTGGACGGGCTGGCACAGCCGGTCTTGTCGCC GATGCGAATGGCGCTGGTGACCTCGCCCCGCGGCCTGCGGATCCTCGACG ACTCCTACAACGCCAACCCGATGTCGACCGAGGCCGCCCTGCGCTCCCTG GTGGCCCTCCCCGTCGACCCCGGCGCCCGCCGGGTGGCCGTCCTCGGCGA GATGGCCGAACTCGGTGAGATCTCCGCCGCCGCCCATGCCCGGCTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig98596:2..697+

>mRNA_M-pyrifera_M_contig98596.22700.1 ID=mRNA_M-pyrifera_M_contig98596.22700.1|Name=mRNA_M-pyrifera_M_contig98596.22700.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1392bp|location=Sequence derived from alignment at M-pyrifera_M_contig98596:2..697+ (Macrocystis pyrifera P11B4 male)
GCGCCCGACGACACCGAGGCGTTGGTGCTCGAGATGGGCGCCCGCGGGCC
GGGCCACATCGCCCACCTGTGTGCGATCGGTCGCCCCACGGTCGGCATCG
TGACCACCGTCGGCACCGCCCACACCAGCGAGTTCGGCTCGGTCGAGGCG
GTCGCCGAAGCCAAGGGCGAGCTCATCGAGTCGCTCCCCGCGGCCGCCGA
CGGGGGAGTGGCCGTGCTCAACGCCGACCTCCCCCTGGTGACGGCGATGG
CCTCGCGCACCGCCGCCGCCATCGTGGGGTTCGGCCGCGACGGCGACGTG
CGGGCCGAGTCGATCACCCTCGACGACGAGCTGGTCCCGACCTTCACCCT
CGTCACGCCCCAGGGTCGAGCCGAGGTCGTGCTCGGCGCCCGTGGCGTGC
ACCTGGTCGACAACGCACTCGCCGCTGCTGCCGCCGCCCTCGCCGTGGGT
GTGCCTCTCGAGACCGTGGTGGACGGGCTGGCACAGCCGGTCTTGTCGCC
GATGCGAATGGCGCTGGTGACCTCGCCCCGCGGCCTGCGGATCCTCGACG
ACTCCTACAACGCCAACCCGATGTCGACCGAGGCCGCCCTGCGCTCCCTG
GTGGCCCTCCCCGTCGACCCCGGCGCCCGCCGGGTGGCCGTCCTCGGCGA
GATGGCCGAACTCGGTGAGATCTCCGCCGCCGCCCATGCCCGGCTGGCGC
CCGACGACACCGAGGCGTTGGTGCTCGAGATGGGCGCCCGCGGGCCGGGC
CACATCGCCCACCTGTGTGCGATCGGTCGCCCCACGGTCGGCATCGTGAC
CACCGTCGGCACCGCCCACACCAGCGAGTTCGGCTCGGTCGAGGCGGTCG
CCGAAGCCAAGGGCGAGCTCATCGAGTCGCTCCCCGCGGCCGCCGACGGG
GGAGTGGCCGTGCTCAACGCCGACCTCCCCCTGGTGACGGCGATGGCCTC
GCGCACCGCCGCCGCCATCGTGGGGTTCGGCCGCGACGGCGACGTGCGGG
CCGAGTCGATCACCCTCGACGACGAGCTGGTCCCGACCTTCACCCTCGTC
ACGCCCCAGGGTCGAGCCGAGGTCGTGCTCGGCGCCCGTGGCGTGCACCT
GGTCGACAACGCACTCGCCGCTGCTGCCGCCGCCCTCGCCGTGGGTGTGC
CTCTCGAGACCGTGGTGGACGGGCTGGCACAGCCGGTCTTGTCGCCGATG
CGAATGGCGCTGGTGACCTCGCCCCGCGGCCTGCGGATCCTCGACGACTC
CTACAACGCCAACCCGATGTCGACCGAGGCCGCCCTGCGCTCCCTGGTGG
CCCTCCCCGTCGACCCCGGCGCCCGCCGGGTGGCCGTCCTCGGCGAGATG
GCCGAACTCGGTGAGATCTCCGCCGCCGCCCATGCCCGGCTG
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