mRNA_M-pyrifera_M_contig98514.22685.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig98514.22685.1
Unique NamemRNA_M-pyrifera_M_contig98514.22685.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig98514.22685.1 vs. uniprot
Match: A0A517W6N3_9PLAN (Cocaine esterase n=10 Tax=Gimesia TaxID=1649453 RepID=A0A517W6N3_9PLAN)

HSP 1 Score: 480 bits (1236), Expect = 9.870e-166
Identity = 229/232 (98.71%), Postives = 232/232 (100.00%), Query Frame = 1
Query:    1 TVDGKLNHGGYWRNEQEWPLERTVYTKFHLQPAGGLATDAPEVQAAKTSLLFDPENPVPTIGGNISSGNDILVQGGWDQKGSEKIWNFTHPTPLSARDDVLVFQTEPLKEDLEVTGELAVKLWISSSAVDTDFTAKLIDVYPPSSDFPGGFDLNIGDGIIRTRFRDSLKEEKLMEPGEIYPVTIKLYPTSNVFKKGHRIRVDISSSNFPRFDVNPNTGEPLNDNRLKQTAVN 696
            TVDGKLNHGGYWRNEQEWPLERTVYTKFHLQPAGGLATDAPEVQAAKTSLLFDPENPVPTIGGNISSGNDILVQGGWDQKGSEKIWNFTHPTPLSARDDVLVFQTEPL+EDLEVTGELAVKLWISSSAVDTDFTAKLIDVYPPSSDFPGGFDLNIGDGIIRTRFRDSLKEEK+MEPGEIYPVTIKLYPTSNVFKKGHRIRVDISSSNFPRFDVNPNTGEPLNDNRLKQTA+N
Sbjct:  381 TVDGKLNHGGYWRNEQEWPLERTVYTKFHLQPAGGLATDAPEVQAAKTSLLFDPENPVPTIGGNISSGNDILVQGGWDQKGSEKIWNFTHPTPLSARDDVLVFQTEPLQEDLEVTGELAVKLWISSSAVDTDFTAKLIDVYPPSSDFPGGFDLNIGDGIIRTRFRDSLKEEKMMEPGEIYPVTIKLYPTSNVFKKGHRIRVDISSSNFPRFDVNPNTGEPLNDNRLKQTAIN 612          
BLAST of mRNA_M-pyrifera_M_contig98514.22685.1 vs. uniprot
Match: A0A517VE01_9PLAN (Cocaine esterase n=8 Tax=Planctomycetaceae TaxID=126 RepID=A0A517VE01_9PLAN)

HSP 1 Score: 416 bits (1068), Expect = 2.430e-140
Identity = 195/232 (84.05%), Postives = 210/232 (90.52%), Query Frame = 1
Query:    1 TVDGKLNHGGYWRNEQEWPLERTVYTKFHLQPAGGLATDAPEVQAAKTSLLFDPENPVPTIGGNISSGNDILVQGGWDQKGSEKIWNFTHPTPLSARDDVLVFQTEPLKEDLEVTGELAVKLWISSSAVDTDFTAKLIDVYPPSSDFPGGFDLNIGDGIIRTRFRDSLKEEKLMEPGEIYPVTIKLYPTSNVFKKGHRIRVDISSSNFPRFDVNPNTGEPLNDNRLKQTAVN 696
            T DGKL HGGYWRNE EWPL+RTVYTK+HLQP GGL+T +P+ + A T+ LFDP NPVPTIGGNISSGNDILVQGGWDQKGSE IWN+T P PLSAR+DV++FQTEPL EDLEVTGELAVKLWISS A DTDFTAKLIDVYPPS+DFPGGFDLNIGDGIIRTRFRDSLK  KLM+PG IYPVTIKLYPTSNVFKKGHRIRVDISSSNFPRFD+NPNTGEPLN+NR  QTA N
Sbjct:  380 TQDGKLQHGGYWRNESEWPLKRTVYTKYHLQPEGGLSTQSPKAEQAATTFLFDPANPVPTIGGNISSGNDILVQGGWDQKGSEHIWNWTQPIPLSARNDVILFQTEPLAEDLEVTGELAVKLWISSDAKDTDFTAKLIDVYPPSADFPGGFDLNIGDGIIRTRFRDSLKTAKLMQPGTIYPVTIKLYPTSNVFKKGHRIRVDISSSNFPRFDINPNTGEPLNNNRRSQTANN 611          
BLAST of mRNA_M-pyrifera_M_contig98514.22685.1 vs. uniprot
Match: A0A7Y5W4X4_9BACT (CocE/NonD family hydrolase n=1 Tax=Pirellulales bacterium TaxID=2715253 RepID=A0A7Y5W4X4_9BACT)

HSP 1 Score: 374 bits (960), Expect = 1.250e-123
Identity = 178/236 (75.42%), Postives = 199/236 (84.32%), Query Frame = 1
Query:    1 TVDGKLNHGGYWRNEQEWPLERTVYTKFHLQPAGGLATDAPEVQ----AAKTSLLFDPENPVPTIGGNISSGNDILVQGGWDQKGSEKIWNFTHPTPLSARDDVLVFQTEPLKEDLEVTGELAVKLWISSSAVDTDFTAKLIDVYPPSSDFPGGFDLNIGDGIIRTRFRDSLKEEKLMEPGEIYPVTIKLYPTSNVFKKGHRIRVDISSSNFPRFDVNPNTGEPLNDNRLKQTAVN 696
            T  G LNHGG+WR+E EWP  RT  T+FHL PAG L+T  PE      AA T  LFDP++PVPTIGGNISSGNDIL+QG WDQ G   +WN+  P PLSAR+DVLVFQ+EPL E+LEVTGE+AVKLW+SSSA DTDFTAKLIDVYPP+ DFPGGFDLNIGDGI+R RFR+SLK EKLM+PGEI P+T+KLYPTSNVFKKGHRIRVDISSSNFPRFDVNPNTGEPLNDNR +QTA N
Sbjct:  410 TDKGLLNHGGFWRDEHEWPPARTQSTRFHLLPAGQLSTSPPEAAPGDTAASTRFLFDPKDPVPTIGGNISSGNDILLQGAWDQLGGPHVWNWPKPVPLSARNDVLVFQSEPLAENLEVTGEIAVKLWVSSSAPDTDFTAKLIDVYPPNEDFPGGFDLNIGDGILRARFRESLKSEKLMKPGEICPITVKLYPTSNVFKKGHRIRVDISSSNFPRFDVNPNTGEPLNDNRGRQTATN 645          
BLAST of mRNA_M-pyrifera_M_contig98514.22685.1 vs. uniprot
Match: A0A1T4YGA2_9BACT (PepX_C domain-containing protein n=1 Tax=Prosthecobacter debontii TaxID=48467 RepID=A0A1T4YGA2_9BACT)

HSP 1 Score: 366 bits (940), Expect = 5.360e-121
Identity = 167/232 (71.98%), Postives = 195/232 (84.05%), Query Frame = 1
Query:    1 TVDGKLNHGGYWRNEQEWPLERTVYTKFHLQPAGGLATDAPEVQAAKTSLLFDPENPVPTIGGNISSGNDILVQGGWDQKGSEKIWNFTHPTPLSARDDVLVFQTEPLKEDLEVTGELAVKLWISSSAVDTDFTAKLIDVYPPSSDFPGGFDLNIGDGIIRTRFRDSLKEEKLMEPGEIYPVTIKLYPTSNVFKKGHRIRVDISSSNFPRFDVNPNTGEPLNDNRLKQTAVN 696
            T  G L HGG WR+EQEWPL RT++T F+L   G ++ D P    A TS +FDP NPVPTIGGNISSG+ I++QGGWDQKG   IWN++ P PLSAR+D+LVFQ+EPL ED+EVTGE+  KLW+SSS VDTDFTAKL+DVYP S+D+PGGFDLN+ DGI+R RFR+SLK EKLM PGE+YP+TI+LYPTSNVFKKGHRIRVDISSSNFPRFDVNPNTGEPLNDNR  +TAVN
Sbjct:  385 TEAGLLKHGGSWRDEQEWPLARTLWTNFYLMEGGAISRDQPTAATAHTSYIFDPRNPVPTIGGNISSGDGIMLQGGWDQKGGPHIWNWSKPLPLSARNDILVFQSEPLTEDMEVTGEIVAKLWVSSSVVDTDFTAKLVDVYPASADWPGGFDLNVTDGILRARFRESLKTEKLMTPGEVYPITIRLYPTSNVFKKGHRIRVDISSSNFPRFDVNPNTGEPLNDNRRVETAVN 616          
BLAST of mRNA_M-pyrifera_M_contig98514.22685.1 vs. uniprot
Match: A0A517Z023_9PLAN (Cocaine esterase n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517Z023_9PLAN)

HSP 1 Score: 363 bits (932), Expect = 2.390e-120
Identity = 169/228 (74.12%), Postives = 193/228 (84.65%), Query Frame = 1
Query:   10 GKLNHGGYWRNEQEWPLERTVYTKFHLQPAGGLATDAPEVQAAKTSLLFDPENPVPTIGGNISSGNDILVQGGWDQKGSEKIWNFTHPTPLSARDDVLVFQTEPLKEDLEVTGELAVKLWISSSAVDTDFTAKLIDVYPPSSDFPGGFDLNIGDGIIRTRFRDSLKEEKLMEPGEIYPVTIKLYPTSNVFKKGHRIRVDISSSNFPRFDVNPNTGEPLNDNRLKQTAV 693
            G+L HGGYWRNE EWPL RT YT + LQP GGL+T  P+V  A +   FDPE+PVPTIGGN+SSGNDILVQG W+QKG   +WNF  P P+SAR+DVLVFQ+EPL +DLEVTGE+ V+L+ SSSAVDTDFTAKLIDVYPPS D+PGGFDLNIGDGI+R RFR+SL++E LMEPGE+Y  TIKLYPTSNVFKKGHRIRVDISSSNFPRFDVNPNTGEPLN +R  + A 
Sbjct:  340 GRLQHGGYWRNEHEWPLARTRYTDYFLQPDGGLSTTRPQVDEATSQYQFDPEDPVPTIGGNVSSGNDILVQGAWNQKGGPHLWNFQEPIPISARNDVLVFQSEPLAQDLEVTGEIEVRLFASSSAVDTDFTAKLIDVYPPSDDWPGGFDLNIGDGIVRARFRESLEKEVLMEPGEVYEFTIKLYPTSNVFKKGHRIRVDISSSNFPRFDVNPNTGEPLNRHRRTEVAT 567          
BLAST of mRNA_M-pyrifera_M_contig98514.22685.1 vs. uniprot
Match: A0A3D3R1P8_9PLAN (Antibiotic hydrolase (Fragment) n=1 Tax=Gimesia maris TaxID=122 RepID=A0A3D3R1P8_9PLAN)

HSP 1 Score: 350 bits (897), Expect = 2.890e-120
Identity = 170/199 (85.43%), Postives = 179/199 (89.95%), Query Frame = 1
Query:  100 GGLATDAPEVQAAKTSLLFDPENPVPTIGGNISSGNDILVQGGWDQKGSEKIWNFTHPTPLSARDDVLVFQTEPLKEDLEVTGELAVKLWISSSAVDTDFTAKLIDVYPPSSDFPGGFDLNIGDGIIRTRFRDSLKEEKLMEPGEIYPVTIKLYPTSNVFKKGHRIRVDISSSNFPRFDVNPNTGEPLNDNRLKQTAVN 696
            GGL+T AP+ + A T+ LFDP NPVPTIGGNISSGNDILVQGGWDQKGSE IWN+T P PLSAR DV+VFQTEPL EDLEVTGEL VKLW SS A DTDFTAKLIDVYPPSSDFPGGF+LNIGDGIIRTRFRDSLK EKLMEPG IYPVTIKLYPTSNVFKKGHRIRVDISSSNFPRFD+NPNTGEPLN+NR  QTA N
Sbjct:    1 GGLSTQAPKAEQAATTYLFDPANPVPTIGGNISSGNDILVQGGWDQKGSEHIWNWTQPIPLSARKDVIVFQTEPLAEDLEVTGELTVKLWSSSDAKDTDFTAKLIDVYPPSSDFPGGFNLNIGDGIIRTRFRDSLKTEKLMEPGTIYPVTIKLYPTSNVFKKGHRIRVDISSSNFPRFDINPNTGEPLNNNRRTQTANN 199          
BLAST of mRNA_M-pyrifera_M_contig98514.22685.1 vs. uniprot
Match: A0A1P8WNU2_9PLAN (Cocaine esterase n=1 Tax=Fuerstiella marisgermanici TaxID=1891926 RepID=A0A1P8WNU2_9PLAN)

HSP 1 Score: 362 bits (930), Expect = 1.810e-119
Identity = 171/230 (74.35%), Postives = 192/230 (83.48%), Query Frame = 1
Query:    4 VDGKLNHGGYWRNEQEWPLERTVYTKFHLQPAGGLATDAPEVQAAKTSLLFDPENPVPTIGGNISSGNDILVQGGWDQKGSEKIWNFTHPTPLSARDDVLVFQTEPLKEDLEVTGELAVKLWISSSAVDTDFTAKLIDVYPPSSDFPGGFDLNIGDGIIRTRFRDSLKEEKLMEPGEIYPVTIKLYPTSNVFKKGHRIRVDISSSNFPRFDVNPNTGEPLNDNRLKQTAV 693
            V G+L HGG+WRNE EWPL RT YT F+LQP GGL+ D    + + T   FDP+NPVPTIGGN+SSGNDIL+QG W+QKG   +WNF  P P+SAR+DVLVFQ+EPL EDLEVTG + V+L+ SSSAVDTDFTAKLIDVYPPSSD+PGGFDLNIGDGIIR RFR+SLK+E LM PGE Y  TIKLYPTSNVFKKGHRIRVDISSSNFPRFDVNPNTGEPLN NRL + A 
Sbjct:  386 VKGRLQHGGFWRNENEWPLARTQYTDFYLQPDGGLSQDKAATKKSVTQFQFDPKNPVPTIGGNVSSGNDILLQGAWNQKGGSHVWNFQEPIPISARNDVLVFQSEPLAEDLEVTGVIEVRLFASSSAVDTDFTAKLIDVYPPSSDWPGGFDLNIGDGIIRGRFRESLKKEVLMTPGEAYEFTIKLYPTSNVFKKGHRIRVDISSSNFPRFDVNPNTGEPLNRNRLTKVAT 615          
BLAST of mRNA_M-pyrifera_M_contig98514.22685.1 vs. uniprot
Match: UPI001E311A92 (CocE/NonD family hydrolase n=1 Tax=unclassified Blastopirellula TaxID=2647022 RepID=UPI001E311A92)

HSP 1 Score: 361 bits (927), Expect = 3.370e-119
Identity = 172/227 (75.77%), Postives = 192/227 (84.58%), Query Frame = 1
Query:   10 GKLNHGGYWRNEQEWPLERTVYTKFHLQPAGGLATDAPEVQAAKTSLLFDPENPVPTIGGNISSGNDILVQGGWDQKGSEKIWNFTHPTPLSARDDVLVFQTEPLKEDLEVTGELAVKLWISSSAVDTDFTAKLIDVYPPSSDFPGGFDLNIGDGIIRTRFRDSLKEEKLMEPGEIYPVTIKLYPTSNVFKKGHRIRVDISSSNFPRFDVNPNTGEPLNDNRLKQTA 690
            G L HGGYWR+EQEWPL RT YT F+LQP GGLAT A     + T   FDP +PVPTIGGNISSG+DILVQG W+QKG   IWNF  P P+S+R DVLVFQTEPL+EDLEVTGE+ VKL+ SSSAVDTDFTAKLIDVYPPS+D+PGGFDLN+GDGI+R RFR+SL +EKLM PGE+Y  TIKLYPTSNVFK+GHRIRVDISSSNFPRFDVNPNTGEPLN NRL + A
Sbjct:  374 GCLVHGGYWRDEQEWPLARTKYTSFYLQPGGGLATKAATAPNSVTQFQFDPADPVPTIGGNISSGDDILVQGAWNQKGGPHIWNFQQPVPISSRRDVLVFQTEPLEEDLEVTGEIEVKLYASSSAVDTDFTAKLIDVYPPSTDWPGGFDLNLGDGIVRGRFRESLTKEKLMTPGEVYEFTIKLYPTSNVFKQGHRIRVDISSSNFPRFDVNPNTGEPLNRNRLTKVA 600          
BLAST of mRNA_M-pyrifera_M_contig98514.22685.1 vs. uniprot
Match: A0A3L7VP44_9BACT (CocE/NonD family hydrolase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7VP44_9BACT)

HSP 1 Score: 360 bits (925), Expect = 4.050e-119
Identity = 170/243 (69.96%), Postives = 197/243 (81.07%), Query Frame = 1
Query:    7 DGKLNHGGYWRNEQEWPLERTVYTKFHLQPAGGLATDAPEV-------------QAAKTSLLFDPENPVPTIGGNISSGNDILVQGGWDQKGSEKIWNFTHPTPLSARDDVLVFQTEPLKEDLEVTGELAVKLWISSSAVDTDFTAKLIDVYPPSSDFPGGFDLNIGDGIIRTRFRDSLKEEKLMEPGEIYPVTIKLYPTSNVFKKGHRIRVDISSSNFPRFDVNPNTGEPLNDNRLKQTAVN 696
            +G+LNHGGYWRNEQ WP  R V  K +L   G L T APE              +A  TS  FDP NPVPTIGGNISSGNDI++QG WDQ+G   IWN+  P PLSAR+DVLVFQ+EPL E++EVTGE+ V+LW+SSSAVDTDFTAKLIDVYPPS DFPGGFDLNIGDGI R RFRDSL++E+LM+PGE+YP+T+KLYPT+NVFK+GHRIRVDISSSNFPRFDVNPNTGEPL ++RL+QT VN
Sbjct:  340 EGRLNHGGYWRNEQAWPPARAVSVKHYLTAGGRLTTVAPETTDDEXXXXXXXGDEATSTSFAFDPANPVPTIGGNISSGNDIMLQGAWDQRGGPHIWNWLKPIPLSARNDVLVFQSEPLTENVEVTGEIEVRLWVSSSAVDTDFTAKLIDVYPPSGDFPGGFDLNIGDGIARARFRDSLQKEQLMKPGEVYPITVKLYPTANVFKRGHRIRVDISSSNFPRFDVNPNTGEPLANHRLQQTCVN 582          
BLAST of mRNA_M-pyrifera_M_contig98514.22685.1 vs. uniprot
Match: UPI0013DD07D8 (CocE/NonD family hydrolase n=1 Tax=Candidatus Laterigemmans baculatus TaxID=2770505 RepID=UPI0013DD07D8)

HSP 1 Score: 361 bits (927), Expect = 4.980e-119
Identity = 170/228 (74.56%), Postives = 195/228 (85.53%), Query Frame = 1
Query:   10 GKLNHGGYWRNEQEWPLERTVYTKFHLQPAGGLATDAPEVQAAKTSLLFDPENPVPTIGGNISSGNDILVQGGWDQKGSEKIWNFTHPTPLSARDDVLVFQTEPLKEDLEVTGELAVKLWISSSAVDTDFTAKLIDVYPPSSDFPGGFDLNIGDGIIRTRFRDSLKEEKLMEPGEIYPVTIKLYPTSNVFKKGHRIRVDISSSNFPRFDVNPNTGEPLNDNRLKQTAV 693
            G++ HGGYWR+E EWPL RTVYT ++L   GGLAT  P+  ++ T   FDP +PVPTIGGNISS NDIL+QG WDQKG   +WNF  P PLSAR+DVLVFQ+EPL+EDLEVTGE+ V+L  SSSAVDTDFTAKLIDVYPPS+++PGGFDLNIGDGI+R RFR+SLKEEKLMEPGE+Y  TIKLYPTSNVFKKGHRIRVDISSSNFPRFDVNPN+GEPLN +RL +TA 
Sbjct:  383 GRIEHGGYWRDEHEWPLARTVYTDYYLHGDGGLATKPPKGDSSTTQFQFDPNDPVPTIGGNISSHNDILLQGAWDQKGGPHVWNFFDPIPLSARNDVLVFQSEPLQEDLEVTGEIEVRLHASSSAVDTDFTAKLIDVYPPSAEWPGGFDLNIGDGIVRGRFRESLKEEKLMEPGEVYEFTIKLYPTSNVFKKGHRIRVDISSSNFPRFDVNPNSGEPLNRHRLIKTAT 610          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98514.22685.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517W6N3_9PLAN9.870e-16698.71Cocaine esterase n=10 Tax=Gimesia TaxID=1649453 Re... [more]
A0A517VE01_9PLAN2.430e-14084.05Cocaine esterase n=8 Tax=Planctomycetaceae TaxID=1... [more]
A0A7Y5W4X4_9BACT1.250e-12375.42CocE/NonD family hydrolase n=1 Tax=Pirellulales ba... [more]
A0A1T4YGA2_9BACT5.360e-12171.98PepX_C domain-containing protein n=1 Tax=Prostheco... [more]
A0A517Z023_9PLAN2.390e-12074.12Cocaine esterase n=1 Tax=Maioricimonas rarisocia T... [more]
A0A3D3R1P8_9PLAN2.890e-12085.43Antibiotic hydrolase (Fragment) n=1 Tax=Gimesia ma... [more]
A0A1P8WNU2_9PLAN1.810e-11974.35Cocaine esterase n=1 Tax=Fuerstiella marisgermanic... [more]
UPI001E311A923.370e-11975.77CocE/NonD family hydrolase n=1 Tax=unclassified Bl... [more]
A0A3L7VP44_9BACT4.050e-11969.96CocE/NonD family hydrolase n=1 Tax=Planctomycetes ... [more]
UPI0013DD07D84.980e-11974.56CocE/NonD family hydrolase n=1 Tax=Candidatus Late... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig98514contigM-pyrifera_M_contig98514:3..698 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score417.2
Seed ortholog evalue5.2e-114
Seed eggNOG ortholog344747.PM8797T_06205
KEGG koko:K06978
Hectar predicted targeting categoryother localisation
EggNOG free text desc.X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
EggNOG OGs2J2G5@203682,COG2936@1,COG2936@2
COG Functional cat.S
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons1
Model size696
Cds size696
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816902.4679327-CDS-M-pyrifera_M_contig98514:2..6981622816902.4679327-CDS-M-pyrifera_M_contig98514:2..698Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig98514 3..698 -
1692278245.7192729-CDS-M-pyrifera_M_contig98514:2..6981692278245.7192729-CDS-M-pyrifera_M_contig98514:2..698Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig98514 3..698 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig98514.22685.1prot_M-pyrifera_M_contig98514.22685.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig98514 3..698 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig98514.22685.1

>prot_M-pyrifera_M_contig98514.22685.1 ID=prot_M-pyrifera_M_contig98514.22685.1|Name=mRNA_M-pyrifera_M_contig98514.22685.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=232bp
TVDGKLNHGGYWRNEQEWPLERTVYTKFHLQPAGGLATDAPEVQAAKTSL
LFDPENPVPTIGGNISSGNDILVQGGWDQKGSEKIWNFTHPTPLSARDDV
LVFQTEPLKEDLEVTGELAVKLWISSSAVDTDFTAKLIDVYPPSSDFPGG
FDLNIGDGIIRTRFRDSLKEEKLMEPGEIYPVTIKLYPTSNVFKKGHRIR
VDISSSNFPRFDVNPNTGEPLNDNRLKQTAVN
back to top

mRNA from alignment at M-pyrifera_M_contig98514:3..698-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig98514.22685.1 ID=mRNA_M-pyrifera_M_contig98514.22685.1|Name=mRNA_M-pyrifera_M_contig98514.22685.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=696bp|location=Sequence derived from alignment at M-pyrifera_M_contig98514:3..698- (Macrocystis pyrifera P11B4 male)
ACCGTGGACGGGAAGTTGAATCATGGCGGTTACTGGAGGAACGAGCAGGA GTGGCCACTGGAACGGACCGTATACACCAAATTTCATCTGCAACCTGCAG GCGGGCTCGCGACTGATGCTCCTGAAGTACAGGCTGCGAAGACCAGCCTG CTGTTCGATCCGGAGAATCCGGTGCCGACGATCGGGGGAAACATTTCCAG TGGAAATGACATCCTGGTGCAGGGGGGCTGGGATCAGAAGGGGAGTGAGA AGATCTGGAATTTCACGCATCCGACGCCGCTGTCAGCCCGGGATGACGTG CTGGTCTTTCAGACGGAACCTCTGAAAGAGGATCTGGAAGTCACAGGGGA ACTGGCAGTGAAGCTCTGGATTTCGTCTTCTGCAGTCGATACCGACTTTA CGGCGAAGCTGATTGACGTGTATCCGCCGAGCAGTGACTTCCCGGGCGGG TTTGATCTGAACATCGGCGACGGGATTATCCGAACGCGGTTCCGCGATTC ACTGAAGGAAGAAAAGCTGATGGAGCCGGGGGAGATTTATCCGGTGACGA TCAAGCTGTATCCGACATCGAACGTGTTCAAGAAGGGGCATCGGATTCGC GTGGATATTTCGAGCAGTAACTTTCCACGGTTTGACGTGAACCCGAATAC GGGGGAGCCATTGAATGACAATCGGTTGAAGCAGACCGCGGTCAAT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig98514:3..698-

>mRNA_M-pyrifera_M_contig98514.22685.1 ID=mRNA_M-pyrifera_M_contig98514.22685.1|Name=mRNA_M-pyrifera_M_contig98514.22685.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1392bp|location=Sequence derived from alignment at M-pyrifera_M_contig98514:3..698- (Macrocystis pyrifera P11B4 male)
ACCGTGGACGGGAAGTTGAATCATGGCGGTTACTGGAGGAACGAGCAGGA
GTGGCCACTGGAACGGACCGTATACACCAAATTTCATCTGCAACCTGCAG
GCGGGCTCGCGACTGATGCTCCTGAAGTACAGGCTGCGAAGACCAGCCTG
CTGTTCGATCCGGAGAATCCGGTGCCGACGATCGGGGGAAACATTTCCAG
TGGAAATGACATCCTGGTGCAGGGGGGCTGGGATCAGAAGGGGAGTGAGA
AGATCTGGAATTTCACGCATCCGACGCCGCTGTCAGCCCGGGATGACGTG
CTGGTCTTTCAGACGGAACCTCTGAAAGAGGATCTGGAAGTCACAGGGGA
ACTGGCAGTGAAGCTCTGGATTTCGTCTTCTGCAGTCGATACCGACTTTA
CGGCGAAGCTGATTGACGTGTATCCGCCGAGCAGTGACTTCCCGGGCGGG
TTTGATCTGAACATCGGCGACGGGATTATCCGAACGCGGTTCCGCGATTC
ACTGAAGGAAGAAAAGCTGATGGAGCCGGGGGAGATTTATCCGGTGACGA
TCAAGCTGTATCCGACATCGAACGTGTTCAAGAAGGGGCATCGGATTCGC
GTGGATATTTCGAGCAGTAACTTTCCACGGTTTGACGTGAACCCGAATAC
GGGGGAGCCATTGAATGACAATCGGTTGAAGCAGACCGCGGTCAATACCG
TGGACGGGAAGTTGAATCATGGCGGTTACTGGAGGAACGAGCAGGAGTGG
CCACTGGAACGGACCGTATACACCAAATTTCATCTGCAACCTGCAGGCGG
GCTCGCGACTGATGCTCCTGAAGTACAGGCTGCGAAGACCAGCCTGCTGT
TCGATCCGGAGAATCCGGTGCCGACGATCGGGGGAAACATTTCCAGTGGA
AATGACATCCTGGTGCAGGGGGGCTGGGATCAGAAGGGGAGTGAGAAGAT
CTGGAATTTCACGCATCCGACGCCGCTGTCAGCCCGGGATGACGTGCTGG
TCTTTCAGACGGAACCTCTGAAAGAGGATCTGGAAGTCACAGGGGAACTG
GCAGTGAAGCTCTGGATTTCGTCTTCTGCAGTCGATACCGACTTTACGGC
GAAGCTGATTGACGTGTATCCGCCGAGCAGTGACTTCCCGGGCGGGTTTG
ATCTGAACATCGGCGACGGGATTATCCGAACGCGGTTCCGCGATTCACTG
AAGGAAGAAAAGCTGATGGAGCCGGGGGAGATTTATCCGGTGACGATCAA
GCTGTATCCGACATCGAACGTGTTCAAGAAGGGGCATCGGATTCGCGTGG
ATATTTCGAGCAGTAACTTTCCACGGTTTGACGTGAACCCGAATACGGGG
GAGCCATTGAATGACAATCGGTTGAAGCAGACCGCGGTCAAT
back to top