mRNA_M-pyrifera_M_contig98509.22681.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig98509.22681.1
Unique NamemRNA_M-pyrifera_M_contig98509.22681.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig98509.22681.1 vs. uniprot
Match: A0A2E7K7Q2_9PLAN (Probable pectate lyase C n=4 Tax=Gimesia TaxID=1649453 RepID=A0A2E7K7Q2_9PLAN)

HSP 1 Score: 417 bits (1073), Expect = 3.930e-131
Identity = 228/232 (98.28%), Postives = 229/232 (98.71%), Query Frame = 1 
Query:    1 DEVTVDFETSNGTAVAGIDYAFTTGRVTFSAGETTQVVRVIVNGDTLVEDHETFFVNLFNAQGAAIADDQGLGTILNDEASISIDDVTLDEGPVGTTTNFNFTVSLLTPVAGVVTVDLETADISATLADSDYLQLLPQTITFNPGETEKTITVVVNGDSTIESDETFSVNLSNASSNATIADATGIGTIENDDFALLSISDVTLTEDYDGGATTIFTFTVTVSQATSADVTF 696
            DEVTVDFETSNGTA+AGIDYAFTTGRVTFSAGETTQVVRVIVNGDTLVEDHETFFVNLFNAQGAAIADDQGLGTILNDEASISIDDVTLDEGPVGTTTNFNFTVSLLTPVAGVVTVDLETADISATLADSDYLQLLPQTITFNPGETEKTITVVVNGDSTIESDETFSVNLSNAS NATIADATGIGTIENDDFALLSISDVTLTEDYDGG TT FTFTVTVSQATSADVTF
Sbjct: 4518 DEVTVDFETSNGTAIAGIDYAFTTGRVTFSAGETTQVVRVIVNGDTLVEDHETFFVNLFNAQGAAIADDQGLGTILNDEASISIDDVTLDEGPVGTTTNFNFTVSLLTPVAGVVTVDLETADISATLADSDYLQLLPQTITFNPGETEKTITVVVNGDSTIESDETFSVNLSNASGNATIADATGIGTIENDDFALLSISDVTLTEDYDGGPTTTFTFTVTVSQATSADVTF 4749
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BLAST of mRNA_M-pyrifera_M_contig98509.22681.1 vs. uniprot
Match: A0A6I6AI90_9PLAN (Probable pectate lyase C n=1 Tax=Gimesia benthica TaxID=2608982 RepID=A0A6I6AI90_9PLAN)

HSP 1 Score: 410 bits (1055), Expect = 9.950e-129
Identity = 223/232 (96.12%), Postives = 230/232 (99.14%), Query Frame = 1 
Query:    1 DEVTVDFETSNGTAVAGIDYAFTTGRVTFSAGETTQVVRVIVNGDTLVEDHETFFVNLFNAQGAAIADDQGLGTILNDEASISIDDVTLDEGPVGTTTNFNFTVSLLTPVAGVVTVDLETADISATLADSDYLQLLPQTITFNPGETEKTITVVVNGDSTIESDETFSVNLSNASSNATIADATGIGTIENDDFALLSISDVTLTEDYDGGATTIFTFTVTVSQATSADVTF 696
            DEVTVDFETSNGTAVAGIDYAFTTGRVTFSAGETTQVVRV+VNGDTLVEDHETFFVNLFNAQGAAIADDQGLGTILNDEASISIDDV+L+EGPVGTTTNFNFTVSLLTPVAGVVTVDLETADISATLADSDY+QLLPQTITF+PGETEKTITVVVNGD+ IE+DETF VNLSNASSNATIADATGIGTIENDDFALLSISDVTLTEDYDGGATTIFTFTVTVSQATSADVTF
Sbjct: 1202 DEVTVDFETSNGTAVAGIDYAFTTGRVTFSAGETTQVVRVLVNGDTLVEDHETFFVNLFNAQGAAIADDQGLGTILNDEASISIDDVSLEEGPVGTTTNFNFTVSLLTPVAGVVTVDLETADISATLADSDYVQLLPQTITFDPGETEKTITVVVNGDTAIEADETFGVNLSNASSNATIADATGIGTIENDDFALLSISDVTLTEDYDGGATTIFTFTVTVSQATSADVTF 1433
[Close]
BLAST of mRNA_M-pyrifera_M_contig98509.22681.1 vs. uniprot
Match: A0A517WHU1_9PLAN (Probable pectate lyase C n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517WHU1_9PLAN)

HSP 1 Score: 401 bits (1031), Expect = 1.740e-125
Identity = 219/232 (94.40%), Postives = 226/232 (97.41%), Query Frame = 1 
Query:    1 DEVTVDFETSNGTAVAGIDYAFTTGRVTFSAGETTQVVRVIVNGDTLVEDHETFFVNLFNAQGAAIADDQGLGTILNDEASISIDDVTLDEGPVGTTTNFNFTVSLLTPVAGVVTVDLETADISATLADSDYLQLLPQTITFNPGETEKTITVVVNGDSTIESDETFSVNLSNASSNATIADATGIGTIENDDFALLSISDVTLTEDYDGGATTIFTFTVTVSQATSADVTF 696
            DEVTVDFETSNGTAVAGIDYAFTTGRVTFSAGETTQVVRVIVNGDTLVEDHETFFVNLFNAQGAAIADDQGLGTILNDEASISIDDV+L+EGPVGTTTNFNFTVSLLTPVAGVVTVDL TAD++ATLADSDY QLLPQTITFNPGETEKTITVVVNGD+ IE+DETFSVNLSNASSNATIADATGIGTIENDDFALLSISDVTLTE+Y GG TT FTFTVTVSQATSADVTF
Sbjct: 4515 DEVTVDFETSNGTAVAGIDYAFTTGRVTFSAGETTQVVRVIVNGDTLVEDHETFFVNLFNAQGAAIADDQGLGTILNDEASISIDDVSLEEGPVGTTTNFNFTVSLLTPVAGVVTVDLATADLTATLADSDYAQLLPQTITFNPGETEKTITVVVNGDTAIEADETFSVNLSNASSNATIADATGIGTIENDDFALLSISDVTLTENYGGGPTTTFTFTVTVSQATSADVTF 4746
[Close]
BLAST of mRNA_M-pyrifera_M_contig98509.22681.1 vs. uniprot
Match: A0A3D3R2U6_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Gimesia maris TaxID=122 RepID=A0A3D3R2U6_9PLAN)

HSP 1 Score: 343 bits (880), Expect = 1.620e-112
Identity = 184/232 (79.31%), Postives = 207/232 (89.22%), Query Frame = 1 
Query:    1 DEVTVDFETSNGTAVAGIDYAFTTGRVTFSAGETTQVVRVIVNGDTLVEDHETFFVNLFNAQGAAIADDQGLGTILNDEASISIDDVTLDEGPVGTTTNFNFTVSLLTPVAGVVTVDLETADISATLADSDYLQLLPQTITFNPGETEKTITVVVNGDSTIESDETFSVNLSNASSNATIADATGIGTIENDDFALLSISDVTLTEDYDGGATTIFTFTVTVSQATSADVTF 696
            DEVTVD+ETSNGTA AG+DYAFTTG+VTF+ GETTQ++ VIVNGDT VEDHETFFVNLFN+ GA I D Q +GTILNDEASI+I DVT  EGPVGTTT+FNF VSL TPVAGVVTVDL+TAD SATLADSDY+QLLPQTITFNPGET KT+TV VNGDS IE DETF+V LSNASSNATIAD++G+GTIENDDFALLS+SDVTLTED+DGGATT F FTV++SQ T++ V F
Sbjct:    7 DEVTVDYETSNGTATAGVDYAFTTGKVTFAPGETTQIIEVIVNGDTTVEDHETFFVNLFNSVGALIGDAQSVGTILNDEASITISDVTALEGPVGTTTSFNFEVSLTTPVAGVVTVDLQTADGSATLADSDYVQLLPQTITFNPGETTKTVTVTVNGDSGIEGDETFTVELSNASSNATIADSSGLGTIENDDFALLSVSDVTLTEDFDGGATTTFNFTVSLSQGTTSIVEF 238
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BLAST of mRNA_M-pyrifera_M_contig98509.22681.1 vs. uniprot
Match: A0A518AB66_9PLAN (Probable pectate lyase C n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518AB66_9PLAN)

HSP 1 Score: 358 bits (919), Expect = 1.970e-110
Identity = 200/231 (86.58%), Postives = 212/231 (91.77%), Query Frame = 1 
Query:    1 DEVTVDFETSNGTAVAGIDYAFTTGRVTFSAGETTQVVRVIVNGDTLVEDHETFFVNLFNAQGAAIADDQGLGTILNDEASISIDDVTLDEGPVGTTTNFNFTVSLLTPVAGVVTVDLETADISATLADSDYLQLLPQTITFNPGETEKTITVVVNGDSTIESDETFSVNLSNASSNATIADATGIGTIENDDFALLSISDVTLTEDYDGGATTIFTFTVTVSQATSADVT 693
            DEV+VDFETSNGTAVAGIDYAFTTGRVTFSAGETTQVVRV+VNGDT VEDHETFFVNLFNA GAAIADDQGLGTILNDEASISIDDV+  EGPVG +TNF FTVSL TPVAGVVTVDL+TAD SATLAD DY QL  QTITFNPGETEKT+TVVVNGD+ IE+DETFSV LSNASSNATIADATGIGTIENDD+ALLSISDVTLTE+Y GGATT FTFTV++SQA  A VT
Sbjct: 4395 DEVSVDFETSNGTAVAGIDYAFTTGRVTFSAGETTQVVRVLVNGDTDVEDHETFFVNLFNANGAAIADDQGLGTILNDEASISIDDVSEMEGPVGLSTNFTFTVSLATPVAGVVTVDLQTADGSATLADLDYDQLPLQTITFNPGETEKTVTVVVNGDTAIEADETFSVELSNASSNATIADATGIGTIENDDYALLSISDVTLTENYGGGATTAFTFTVSLSQAAGAPVT 4625
[Close]
BLAST of mRNA_M-pyrifera_M_contig98509.22681.1 vs. uniprot
Match: A0A2D5H3Q9_9PLAN (Uncharacterized protein (Fragment) n=2 Tax=Gimesia TaxID=1649453 RepID=A0A2D5H3Q9_9PLAN)

HSP 1 Score: 343 bits (880), Expect = 3.370e-105
Identity = 184/232 (79.31%), Postives = 207/232 (89.22%), Query Frame = 1 
Query:    1 DEVTVDFETSNGTAVAGIDYAFTTGRVTFSAGETTQVVRVIVNGDTLVEDHETFFVNLFNAQGAAIADDQGLGTILNDEASISIDDVTLDEGPVGTTTNFNFTVSLLTPVAGVVTVDLETADISATLADSDYLQLLPQTITFNPGETEKTITVVVNGDSTIESDETFSVNLSNASSNATIADATGIGTIENDDFALLSISDVTLTEDYDGGATTIFTFTVTVSQATSADVTF 696
            DEVTVD+ETSNGTA AG+DYAFTTG+VTF+ GETTQ++ VIVNGDT VEDHETFFVNLFN+ GA I D Q +GTILNDEASI+I DVT  EGPVGTTT+FNF VSL TPVAGVVTVDL+TAD SATLADSDY+QLLPQTITFNPGET KT+TV VNGDS IE DETF+V LSNASSNATIAD++G+GTIENDDFALLS+SDVTLTED+DGGATT F FTV++SQ T++ V F
Sbjct: 2645 DEVTVDYETSNGTATAGVDYAFTTGKVTFAPGETTQIIEVIVNGDTTVEDHETFFVNLFNSVGALIGDAQSVGTILNDEASITISDVTALEGPVGTTTSFNFEVSLTTPVAGVVTVDLQTADGSATLADSDYVQLLPQTITFNPGETTKTVTVTVNGDSGIEGDETFTVELSNASSNATIADSSGLGTIENDDFALLSVSDVTLTEDFDGGATTTFNFTVSLSQGTTSIVEF 2876
[Close]
BLAST of mRNA_M-pyrifera_M_contig98509.22681.1 vs. uniprot
Match: A0A518FU83_9PLAN (Probable pectate lyase C n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FU83_9PLAN)

HSP 1 Score: 339 bits (869), Expect = 1.030e-103
Identity = 187/217 (86.18%), Postives = 198/217 (91.24%), Query Frame = 1 
Query:    1 DEVTVDFETSNGTAVAGIDYAFTTGRVTFSAGETTQVVRVIVNGDTLVEDHETFFVNLFNAQGAAIADDQGLGTILNDEASISIDDVTLDEGPVGTTTNFNFTVSLLTPVAGVVTVDLETADISATLADSDYLQLLPQTITFNPGETEKTITVVVNGDSTIESDETFSVNLSNASSNATIADATGIGTIENDDFALLSISDVTLTEDYDGGATTIFT 651
            D VTVDFETSNGTAVAGIDYAFTTGRVTFSAGETTQVVRV+VNGDT VEDHETFFVNLFNA GAAIADDQGLGTILNDEASISI+DVTLDEGPVG TTNF FTVSL TPVA +VTVDL+T D SATLAD DY +L  QTITFNPGETEKT+TVVVNGD+ IESDETF+V LSNASSNATIADA G+GTI+NDD ALLSISDVTLTE+Y GGATT FT
Sbjct: 4513 DVVTVDFETSNGTAVAGIDYAFTTGRVTFSAGETTQVVRVLVNGDTDVEDHETFFVNLFNANGAAIADDQGLGTILNDEASISINDVTLDEGPVGVTTNFTFTVSLSTPVADIVTVDLKTVDGSATLADLDYDELPLQTITFNPGETEKTVTVVVNGDTNIESDETFNVELSNASSNATIADAIGVGTIDNDDLALLSISDVTLTENYGGGATTAFT 4729
[Close]
BLAST of mRNA_M-pyrifera_M_contig98509.22681.1 vs. uniprot
Match: A0A517XGD9_9PLAN (Probable pectate lyase C n=1 Tax=Gimesia maris TaxID=122 RepID=A0A517XGD9_9PLAN)

HSP 1 Score: 327 bits (838), Expect = 1.520e-99
Identity = 178/232 (76.72%), Postives = 201/232 (86.64%), Query Frame = 1 
Query:    1 DEVTVDFETSNGTAVAGIDYAFTTGRVTFSAGETTQVVRVIVNGDTLVEDHETFFVNLFNAQGAAIADDQGLGTILNDEASISIDDVTLDEGPVGTTTNFNFTVSLLTPVAGVVTVDLETADISATLADSDYLQLLPQTITFNPGETEKTITVVVNGDSTIESDETFSVNLSNASSNATIADATGIGTIENDDFALLSISDVTLTEDYDGGATTIFTFTVTVSQATSADVTF 696
            DEVTVD+ETSNGTA AG+DYAFTTGRVTF+ GETTQ++ VIVNGDT VEDHETFFVNLFN+ GA I D Q +GTI NDEASI+I DVT  EGPVGTTT+FNF VSL TPVAGVVTVDL+TAD SATLAD DY+Q L QTITF+P ET KT+TV VNGDS IE DETF+V LSN SSNATIAD++G+GTIENDDFALLS+SDVTLTED+DGGATT F FTV++SQ T++ V F
Sbjct: 4525 DEVTVDYETSNGTATAGVDYAFTTGRVTFAPGETTQIIEVIVNGDTTVEDHETFFVNLFNSVGALIGDAQSVGTIYNDEASITISDVTALEGPVGTTTSFNFEVSLTTPVAGVVTVDLQTADGSATLADLDYVQELLQTITFDPDETTKTVTVTVNGDSGIEGDETFTVELSNPSSNATIADSSGLGTIENDDFALLSVSDVTLTEDFDGGATTTFNFTVSLSQGTTSIVEF 4756
[Close]
BLAST of mRNA_M-pyrifera_M_contig98509.22681.1 vs. uniprot
Match: UPI00118D2B58 (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Gimesia maris TaxID=122 RepID=UPI00118D2B58)

HSP 1 Score: 327 bits (838), Expect = 1.520e-99
Identity = 178/232 (76.72%), Postives = 201/232 (86.64%), Query Frame = 1 
Query:    1 DEVTVDFETSNGTAVAGIDYAFTTGRVTFSAGETTQVVRVIVNGDTLVEDHETFFVNLFNAQGAAIADDQGLGTILNDEASISIDDVTLDEGPVGTTTNFNFTVSLLTPVAGVVTVDLETADISATLADSDYLQLLPQTITFNPGETEKTITVVVNGDSTIESDETFSVNLSNASSNATIADATGIGTIENDDFALLSISDVTLTEDYDGGATTIFTFTVTVSQATSADVTF 696
            DEVTVD+ETSNGTA AG+DYAFTTGRVTF+ GETTQ++ VIVNGDT VEDHETFFVNLFN+ GA I D Q +GTI NDEASI+I DVT  EGPVGTTT+FNF VSL TPVAGVVTVDL+TAD SATLAD DY+Q L QTITF+P ET KT+TV VNGDS IE DETF+V LSN SSNATIAD++G+GTIENDDFALLS+SDVTLTED+DGGATT F FTV++SQ T++ V F
Sbjct: 4525 DEVTVDYETSNGTATAGVDYAFTTGRVTFAPGETTQIIEVIVNGDTTVEDHETFFVNLFNSVGALIGDAQSVGTIYNDEASITISDVTALEGPVGTTTSFNFEVSLTTPVAGVVTVDLQTADGSATLADLDYVQELLQTITFDPDETTKTVTVTVNGDSGIEGDETFTVELSNPSSNATIADSSGLGTIENDDFALLSVSDVTLTEDFDGGATTTFNFTVSLSQGTTSIVEF 4756
[Close]
BLAST of mRNA_M-pyrifera_M_contig98509.22681.1 vs. uniprot
Match: A0A517RKF3_9PLAN (Probable pectate lyase C n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RKF3_9PLAN)

HSP 1 Score: 326 bits (836), Expect = 2.820e-99
Identity = 184/231 (79.65%), Postives = 200/231 (86.58%), Query Frame = 1 
Query:    1 DEVTVDFETSNGTAVAGIDYAFTTGRVTFSAGETTQVVRVIVNGDTLVEDHETFFVNLFNAQGAAIADDQGLGTILNDEASISIDDVTLDEGPVGTTTNFNFTVSLLTPVAGVVTVDLETADISATLADSDYLQLLPQTITFNPGETEKTITVVVNGDSTIESDETFSVNLSNASSNATIADATGIGTIENDDFALLSISDVTLTEDYDGGATTIFTFTVTVSQATSADVT 693
            DEVTVDFETSNGTAVAGIDYAFTTG VTFS GETTQ++ V+VNGDT VEDHETFFVNLFNA GA IADDQ LGTILNDEA ISI DVT  EGPVGTTTNFNF VSL + VA VVTVDL+T D SATLAD+DY+QL  QTITFNPGET K +TVVVNGDS+IESDETFSV LSN S+NATI+D+ G GTI+NDDFALLSISDVTLTE + GGATT FTFTV++SQA  A VT
Sbjct: 4385 DEVTVDFETSNGTAVAGIDYAFTTGTVTFSPGETTQIIEVLVNGDTDVEDHETFFVNLFNAVGAQIADDQSLGTILNDEADISISDVTALEGPVGTTTNFNFVVSLASAVADVVTVDLQTLDGSATLADADYVQLPLQTITFNPGETSKMVTVVVNGDSSIESDETFSVELSNQSANATISDSIGTGTIDNDDFALLSISDVTLTESF-GGATTDFTFTVSLSQAAGAPVT 4614
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98509.22681.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7K7Q2_9PLAN3.930e-13198.28Probable pectate lyase C n=4 Tax=Gimesia TaxID=164... [more]
A0A6I6AI90_9PLAN9.950e-12996.12Probable pectate lyase C n=1 Tax=Gimesia benthica ... [more]
A0A517WHU1_9PLAN1.740e-12594.40Probable pectate lyase C n=1 Tax=Gimesia chilikens... [more]
A0A3D3R2U6_9PLAN1.620e-11279.31Uncharacterized protein (Fragment) n=1 Tax=Gimesia... [more]
A0A518AB66_9PLAN1.970e-11086.58Probable pectate lyase C n=2 Tax=Gimesia panareens... [more]
A0A2D5H3Q9_9PLAN3.370e-10579.31Uncharacterized protein (Fragment) n=2 Tax=Gimesia... [more]
A0A518FU83_9PLAN1.030e-10386.18Probable pectate lyase C n=1 Tax=Gimesia panareens... [more]
A0A517XGD9_9PLAN1.520e-9976.72Probable pectate lyase C n=1 Tax=Gimesia maris Tax... [more]
UPI00118D2B581.520e-9976.72right-handed parallel beta-helix repeat-containing... [more]
A0A517RKF3_9PLAN2.820e-9979.65Probable pectate lyase C n=1 Tax=Gimesia alba TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig98509contigM-pyrifera_M_contig98509:2..697 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score328.6
Seed ortholog evalue2.4e-87
Seed eggNOG ortholog344747.PM8797T_21028
Preferred namepmp20
KEGG koko:K01173,ko:K07004
KEGG Pathwayko04210,map04210
Hectar predicted targeting categoryother localisation
EggNOG free text desc.DNA RNA non-specific endonuclease
EggNOG OGs2IY9M@203682,COG1520@1,COG1520@2,COG1864@1,COG1864@2,COG2911@1,COG2911@2,COG2931@1,COG2931@2,COG3210@1,COG3210@2,COG3391@1,COG3391@2,COG4935@1,COG4935@2,COG5492@1,COG5492@2
COG Functional cat.Q
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03029
Exons1
Model size696
Cds size696
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816902.3223674-CDS-M-pyrifera_M_contig98509:1..6971622816902.3223674-CDS-M-pyrifera_M_contig98509:1..697Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig98509 2..697 +
1692278245.6375408-CDS-M-pyrifera_M_contig98509:1..6971692278245.6375408-CDS-M-pyrifera_M_contig98509:1..697Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig98509 2..697 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig98509.22681.1prot_M-pyrifera_M_contig98509.22681.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig98509 2..697 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig98509.22681.1

>prot_M-pyrifera_M_contig98509.22681.1 ID=prot_M-pyrifera_M_contig98509.22681.1|Name=mRNA_M-pyrifera_M_contig98509.22681.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=232bp
DEVTVDFETSNGTAVAGIDYAFTTGRVTFSAGETTQVVRVIVNGDTLVED
HETFFVNLFNAQGAAIADDQGLGTILNDEASISIDDVTLDEGPVGTTTNF
NFTVSLLTPVAGVVTVDLETADISATLADSDYLQLLPQTITFNPGETEKT
ITVVVNGDSTIESDETFSVNLSNASSNATIADATGIGTIENDDFALLSIS
DVTLTEDYDGGATTIFTFTVTVSQATSADVTF
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mRNA from alignment at M-pyrifera_M_contig98509:2..697+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig98509.22681.1 ID=mRNA_M-pyrifera_M_contig98509.22681.1|Name=mRNA_M-pyrifera_M_contig98509.22681.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=696bp|location=Sequence derived from alignment at M-pyrifera_M_contig98509:2..697+ (Macrocystis pyrifera P11B4 male)
GACGAAGTGACTGTCGACTTCGAGACGTCCAACGGCACCGCAGTCGCCGG
TATCGACTATGCCTTCACAACCGGTCGGGTGACCTTCTCTGCTGGAGAAA
CTACCCAGGTAGTCCGGGTGATTGTCAATGGTGACACGCTTGTCGAAGAT
CACGAAACCTTCTTCGTCAATCTGTTCAATGCCCAGGGAGCAGCCATTGC
AGATGACCAGGGATTGGGGACGATCCTGAACGATGAGGCTTCGATCTCCA
TCGACGATGTAACGCTGGACGAAGGTCCGGTTGGAACGACAACCAACTTC
AACTTTACCGTTTCGCTGTTGACTCCTGTCGCCGGCGTAGTAACGGTCGA
TCTGGAAACGGCTGACATCTCCGCAACTCTGGCAGATTCGGACTATCTCC
AACTCCTGCCACAGACGATTACTTTCAATCCGGGAGAAACGGAAAAGACA
ATTACGGTTGTCGTAAATGGTGACAGCACGATCGAATCAGATGAAACCTT
CAGTGTGAATCTGTCGAATGCCAGCAGCAATGCTACTATCGCCGATGCGA
CCGGTATCGGGACCATCGAAAATGATGACTTCGCCCTGCTGTCGATCAGT
GATGTTACCCTGACGGAAGACTACGACGGAGGAGCAACGACCATATTCAC
ATTTACTGTGACGGTGTCGCAGGCGACCAGTGCAGATGTTACTTTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig98509:2..697+

>mRNA_M-pyrifera_M_contig98509.22681.1 ID=mRNA_M-pyrifera_M_contig98509.22681.1|Name=mRNA_M-pyrifera_M_contig98509.22681.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1392bp|location=Sequence derived from alignment at M-pyrifera_M_contig98509:2..697+ (Macrocystis pyrifera P11B4 male)
GACGAAGTGACTGTCGACTTCGAGACGTCCAACGGCACCGCAGTCGCCGG
TATCGACTATGCCTTCACAACCGGTCGGGTGACCTTCTCTGCTGGAGAAA
CTACCCAGGTAGTCCGGGTGATTGTCAATGGTGACACGCTTGTCGAAGAT
CACGAAACCTTCTTCGTCAATCTGTTCAATGCCCAGGGAGCAGCCATTGC
AGATGACCAGGGATTGGGGACGATCCTGAACGATGAGGCTTCGATCTCCA
TCGACGATGTAACGCTGGACGAAGGTCCGGTTGGAACGACAACCAACTTC
AACTTTACCGTTTCGCTGTTGACTCCTGTCGCCGGCGTAGTAACGGTCGA
TCTGGAAACGGCTGACATCTCCGCAACTCTGGCAGATTCGGACTATCTCC
AACTCCTGCCACAGACGATTACTTTCAATCCGGGAGAAACGGAAAAGACA
ATTACGGTTGTCGTAAATGGTGACAGCACGATCGAATCAGATGAAACCTT
CAGTGTGAATCTGTCGAATGCCAGCAGCAATGCTACTATCGCCGATGCGA
CCGGTATCGGGACCATCGAAAATGATGACTTCGCCCTGCTGTCGATCAGT
GATGTTACCCTGACGGAAGACTACGACGGAGGAGCAACGACCATATTCAC
ATTTACTGTGACGGTGTCGCAGGCGACCAGTGCAGATGTTACTTTTGACG
AAGTGACTGTCGACTTCGAGACGTCCAACGGCACCGCAGTCGCCGGTATC
GACTATGCCTTCACAACCGGTCGGGTGACCTTCTCTGCTGGAGAAACTAC
CCAGGTAGTCCGGGTGATTGTCAATGGTGACACGCTTGTCGAAGATCACG
AAACCTTCTTCGTCAATCTGTTCAATGCCCAGGGAGCAGCCATTGCAGAT
GACCAGGGATTGGGGACGATCCTGAACGATGAGGCTTCGATCTCCATCGA
CGATGTAACGCTGGACGAAGGTCCGGTTGGAACGACAACCAACTTCAACT
TTACCGTTTCGCTGTTGACTCCTGTCGCCGGCGTAGTAACGGTCGATCTG
GAAACGGCTGACATCTCCGCAACTCTGGCAGATTCGGACTATCTCCAACT
CCTGCCACAGACGATTACTTTCAATCCGGGAGAAACGGAAAAGACAATTA
CGGTTGTCGTAAATGGTGACAGCACGATCGAATCAGATGAAACCTTCAGT
GTGAATCTGTCGAATGCCAGCAGCAATGCTACTATCGCCGATGCGACCGG
TATCGGGACCATCGAAAATGATGACTTCGCCCTGCTGTCGATCAGTGATG
TTACCCTGACGGAAGACTACGACGGAGGAGCAACGACCATATTCACATTT
ACTGTGACGGTGTCGCAGGCGACCAGTGCAGATGTTACTTTT
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