mRNA_M-pyrifera_M_contig98188.22612.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig98188.22612.1 vs. uniprot
Match: A0A835WQ62_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WQ62_9CHLO) HSP 1 Score: 211 bits (538), Expect = 1.750e-59 Identity = 119/213 (55.87%), Postives = 145/213 (68.08%), Query Frame = 1 Query: 13 GEDVSKVVELTFLFTGSPGTGKTTVARKFGELFCGLGILSSSEVVETSASDFITGFVGQAAKRTREIFESAAGKVLFVDEAYALSPQKGGQFAGEALDEMTKLLTDEQFHGKMVVILAGYPNEIDLLLNSNPGLKSRFQSTVPFRDMSPADACTLLEKLLAASEFSLSVDA--KEECVELMAQLSAFSDWSNGRDVKTLAKKMAKHLASRLTG 645 G D EL F F GSPGTGKTTVAR+ G LF LG+L+SSEVV SA+DF+TG+V QA+ +TREIF A G VLF+DEAY L+P+KGGQF EALDEM +LLT+ + GKMVVILAGY EI+ L+ NPGLKSRF + F D SPADA LL L E++L +DA E + QL+A +W+NGRDV T AK+ +SR G Sbjct: 2415 GRDPLASFELNFRFVGSPGTGKTTVARRVGLLFESLGLLASSEVVCCSANDFVTGYVNQASGKTREIFAKAVGGVLFIDEAYRLNPKKGGQFMQEALDEMVQLLTEPTYMGKMVVILAGYDKEIEELMGVNPGLKSRFSQRLHFPDFSPADAAQLLA-LQLRKEYALELDAGAAEALPGMTKQLAAAPNWANGRDVGTWAKRAFAAYSSRRFG 2626
BLAST of mRNA_M-pyrifera_M_contig98188.22612.1 vs. uniprot
Match: A0A7S1DUH3_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DUH3_HEMAN) HSP 1 Score: 196 bits (499), Expect = 2.980e-59 Identity = 103/216 (47.69%), Postives = 145/216 (67.13%), Query Frame = 1 Query: 13 GEDVSKVVELTFLFTGSPGTGKTTVARKFGELFCGLGILSSSEVVETSASDFITGFVGQAAKRTREIFESAAGKVLFVDEAYALSPQKGGQFAGEALDEMTKLLTDEQFHGKMVVILAGYPNEIDLLLNSNPGLKSRFQSTVPFRDMSPADACTLLEKLLAASEFSLSVDAKEE----CVELMAQLSAFSDWSNGRDVKTLAKKMAKHLASRLTGV 648 G+D + VE +LFTG+PGTGKTTVAR+ G +F G+L + EVVETSASDF+TG+VGQA K T +I A GKVLF+DEAY L+P+ GG + E +DE+ K LT E KMVVILAGY +++D +L N G++SRF + F D+S A +L L S+ L++D E + L +L+A +++NGRDV+T +K++ +H+ASR G+ Sbjct: 45 GQDHTSGVEFNYLFTGAPGTGKTTVARRMGRMFRSFGLLPTDEVVETSASDFVTGYVGQAGKTTADIMTKAKGKVLFIDEAYQLNPRIGGGYMSEVVDEIVKSLTSENLKNKMVVILAGYESDVDDMLKVNQGMRSRFSEKIAFPDISAETAAAMLTSKLR-SDHGLTLDPPPEDTAALLGLAGRLAAAPNFANGRDVETWSKRVFQHVASRTRGL 259
BLAST of mRNA_M-pyrifera_M_contig98188.22612.1 vs. uniprot
Match: A0A6U2HPZ1_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A6U2HPZ1_9CHLO) HSP 1 Score: 209 bits (532), Expect = 1.120e-58 Identity = 117/206 (56.80%), Postives = 142/206 (68.93%), Query Frame = 1 Query: 13 GEDVSKVVELTFLFTGSPGTGKTTVARKFGELFCGLGILSSSEVVETSASDFITGFVGQAAKRTREIFESAAGKVLFVDEAYALSPQKGGQFAGEALDEMTKLLTDEQFHGKMVVILAGYPNEIDLLLNSNPGLKSRFQSTVPFRDMSPADA----CTLLEKLLAASEFSLS--VDAKEECVELMAQLSAFSDWSNGRDVKTLAKK 612 G+D V+EL F F G PGTGKTTVAR+ GE+F LG+L+SSE V SASDF TGFVGQAA +TR+IF SA G VLFVDEAY L+P+ GGQF EAL+EM ++LT+ +F GKMVVILAGY +I+ L++SNPGLKSRF V F S DA CT LE+ EF L+ A +E LM +L WSNGRD+ TL K+ Sbjct: 2300 GKDPLSVIELNFRFVGPPGTGKTTVARRMGEMFEELGLLASSETVCCSASDFSTGFVGQAAAKTRDIFASALGGVLFVDEAYRLNPRTGGQFMQEALEEMLQILTEPKFQGKMVVILAGYEEQIEDLMDSNPGLKSRFSQKVEFNSFSCEDAAKLFCTQLER-----EFGLAPAAAASDELPRLMQKLIGAPGWSNGRDIGTLVKR 2500
BLAST of mRNA_M-pyrifera_M_contig98188.22612.1 vs. uniprot
Match: A0A2K3DU41_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DU41_CHLRE) HSP 1 Score: 208 bits (529), Expect = 2.830e-58 Identity = 115/213 (53.99%), Postives = 145/213 (68.08%), Query Frame = 1 Query: 13 GEDVSKVVELTFLFTGSPGTGKTTVARKFGELFCGLGILSSSEVVETSASDFITGFVGQAAKRTREIFESAAGKVLFVDEAYALSPQKGGQFAGEALDEMTKLLTDEQFHGKMVVILAGYPNEIDLLLNSNPGLKSRFQSTVPFRDMSPADACTLLEKLLAASEFSLSVD--AKEECVELMAQLSAFSDWSNGRDVKTLAKKMAKHLASRLTG 645 G D EL F F G+PGTGKTTVAR+ G LF LG+L++SEVV SASDF+TG+V QA+ +TRE+F A G VLF+DEAY LSP+KGG F EALDEM +LLT+ + GKMVVILAGY NEI+ L++ NPGLKSRF + F D +PADA LL L E+ L + A E + +L+A +W+NGRDV T AK++ +SR G Sbjct: 2384 GRDPLASFELNFRFVGAPGTGKTTVARRVGLLFESLGLLATSEVVSCSASDFVTGYVNQASGKTREVFAKAVGGVLFIDEAYRLSPKKGGPFMQEALDEMVQLLTEPAYMGKMVVILAGYDNEIEELMSVNPGLKSRFSQRLHFPDFTPADAAQLLV-LQLRKEYGLELGGGAVEALPGMAQELAAAPNWANGRDVGTWAKRVFAAYSSRCFG 2595
BLAST of mRNA_M-pyrifera_M_contig98188.22612.1 vs. uniprot
Match: A0A835SB85_CHLIN (RabBD domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SB85_CHLIN) HSP 1 Score: 208 bits (529), Expect = 2.830e-58 Identity = 115/213 (53.99%), Postives = 144/213 (67.61%), Query Frame = 1 Query: 13 GEDVSKVVELTFLFTGSPGTGKTTVARKFGELFCGLGILSSSEVVETSASDFITGFVGQAAKRTREIFESAAGKVLFVDEAYALSPQKGGQFAGEALDEMTKLLTDEQFHGKMVVILAGYPNEIDLLLNSNPGLKSRFQSTVPFRDMSPADACTLLEKLLAASEFSLSV--DAKEECVELMAQLSAFSDWSNGRDVKTLAKKMAKHLASRLTG 645 G D EL F F G+PGTGKTTVAR+ G LF LG+L+SSEVV SASDF+TG+V QA+ +TRE+F A G VLF+DEAY L+P+KGG F EALDEM +LLT+ + GKMVVILAGY NEI+ L++ NPGLKSRF + F D SPADA LL L E+ L + DA + L+A +W+NGRDV T AK++ ++R G Sbjct: 2378 GRDPLASFELNFRFVGAPGTGKTTVARRVGLLFESLGLLASSEVVSCSASDFVTGYVNQASGKTREVFAKAVGGVLFIDEAYRLNPKKGGAFMQEALDEMVQLLTEPAYMGKMVVILAGYDNEIEELMSVNPGLKSRFSQRLHFPDFSPADAAQLLA-LQLRKEYGLELGGDAAAALPGMAQDLAAAPNWANGRDVVTWAKRIFAAYSTRRFG 2589
BLAST of mRNA_M-pyrifera_M_contig98188.22612.1 vs. uniprot
Match: A0A2K3DU35_CHLRE (Uncharacterized protein n=3 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DU35_CHLRE) HSP 1 Score: 207 bits (527), Expect = 5.250e-58 Identity = 114/213 (53.52%), Postives = 145/213 (68.08%), Query Frame = 1 Query: 13 GEDVSKVVELTFLFTGSPGTGKTTVARKFGELFCGLGILSSSEVVETSASDFITGFVGQAAKRTREIFESAAGKVLFVDEAYALSPQKGGQFAGEALDEMTKLLTDEQFHGKMVVILAGYPNEIDLLLNSNPGLKSRFQSTVPFRDMSPADACTLLEKLLAASEFSLSVD--AKEECVELMAQLSAFSDWSNGRDVKTLAKKMAKHLASRLTG 645 G D EL F F G+PGTGKTTVAR+ G LF LG+L++SEVV SASDF+TG+V QA+ +TRE+F A G VLF+DEAY L+P+KGG F EALDEM +LLT+ + GKMVVILAGY NEI+ L++ NPGLKSRF + F D +PADA LL L E+ L + A E + +L+A +W+NGRDV T AK++ +SR G Sbjct: 2368 GRDPLASFELNFRFVGAPGTGKTTVARRVGLLFESLGLLATSEVVSCSASDFVTGYVNQASGKTREVFAKAVGGVLFIDEAYRLNPKKGGPFMQEALDEMVQLLTEPAYMGKMVVILAGYDNEIEELMSVNPGLKSRFSQRLHFPDFTPADAAQLLV-LQLRKEYGLELGGGAAEALPGMAQELAAAPNWANGRDVGTWAKRVFAAYSSRCFG 2579
BLAST of mRNA_M-pyrifera_M_contig98188.22612.1 vs. uniprot
Match: A0A835WSI6_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WSI6_9CHLO) HSP 1 Score: 207 bits (527), Expect = 5.250e-58 Identity = 117/213 (54.93%), Postives = 143/213 (67.14%), Query Frame = 1 Query: 13 GEDVSKVVELTFLFTGSPGTGKTTVARKFGELFCGLGILSSSEVVETSASDFITGFVGQAAKRTREIFESAAGKVLFVDEAYALSPQKGGQFAGEALDEMTKLLTDEQFHGKMVVILAGYPNEIDLLLNSNPGLKSRFQSTVPFRDMSPADACTLLEKLLAASEFSLSVDA--KEECVELMAQLSAFSDWSNGRDVKTLAKKMAKHLASRLTG 645 G D EL F F GSPGTGKTTVAR+ G LF LG+L+SSEVV SA+DF+TG+V QA+ +TREIF A G VLF+DEAY L+P+ GG F EALDEM +LLT+ + GKMVVILAGY EI+ L+ NPGLKSRF + F D SPADA LL L E++L +DA E + QL+A +W+NGRDV T AK+ +SR G Sbjct: 2434 GRDPLASFELNFRFVGSPGTGKTTVARRVGLLFESLGLLASSEVVCCSANDFVTGYVNQASGKTREIFAKAVGGVLFIDEAYRLNPKNGGPFMQEALDEMVQLLTEPTYMGKMVVILAGYDKEIEELMGVNPGLKSRFSQRLHFPDFSPADAAQLLA-LQLRKEYALELDAGAAEALPGMAEQLAAAPNWANGRDVGTWAKRAFAAYSSRRFG 2645
BLAST of mRNA_M-pyrifera_M_contig98188.22612.1 vs. uniprot
Match: A0A835Y7R3_9CHLO (Uncharacterized protein n=2 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y7R3_9CHLO) HSP 1 Score: 207 bits (526), Expect = 7.190e-58 Identity = 107/201 (53.23%), Postives = 139/201 (69.15%), Query Frame = 1 Query: 13 GEDVSKVVELTFLFTGSPGTGKTTVARKFGELFCGLGILSSSEVVETSASDFITGFVGQAAKRTREIFESAAGKVLFVDEAYALSPQKGGQFAGEALDEMTKLLTDEQFHGKMVVILAGYPNEIDLLLNSNPGLKSRFQSTVPFRDMSPADACTLLEKLLAASEFSLSVDAKEECVELMAQ-LSAFSDWSNGRDVKTLAKK 612 G D + VEL F FTG+PGTGKTTVAR+ G+LF LG+L S+E+V SASDF+TG+ QA+ +TRE+F+ A G VLF+DEAY L+P+KGG E LDE+ +LLT+ F KMVVILAGY NEI+ L+ NPGLKSRF + F D S DA LL + L L+ + +E + MAQ L++ +W+NGRDV T AK+ Sbjct: 2752 GRDPLQAVELNFRFTGAPGTGKTTVARRVGKLFASLGLLGSAEMVSCSASDFVTGYANQASGKTRELFKKAVGGVLFIDEAYRLNPRKGGPMMAEVLDEIVQLLTEPAFKDKMVVILAGYDNEIEELMAVNPGLKSRFSQVLHFPDFSAEDAAALLRQQLGRDGLELAAEVTQEALVGMAQQLASAPNWANGRDVGTWAKR 2952
BLAST of mRNA_M-pyrifera_M_contig98188.22612.1 vs. uniprot
Match: A0A7J7PQ89_9CHLO (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PQ89_9CHLO) HSP 1 Score: 206 bits (523), Expect = 1.800e-57 Identity = 109/211 (51.66%), Postives = 144/211 (68.25%), Query Frame = 1 Query: 13 GEDVSKVVELTFLFTGSPGTGKTTVARKFGELFCGLGILSSSEVVETSASDFITGFVGQAAKRTREIFESAAGKVLFVDEAYALSPQKGGQFAGEALDEMTKLLTDEQFHGKMVVILAGYPNEIDLLLNSNPGLKSRFQSTVPFRDMSPADACTLLEKLLAASEFSL--SVDAKEECVELMAQLSAFSDWSNGRDVKTLAKKMAKHLASRL 639 G+D EL F F G+PGTGKTTVAR+ G LF LG+L + +VVE SA DF+TG+V QA+ +TR++FE A G VLF+DEAY L+P+ GG F E LDE+ ++LTD+QF GKMVV+LAGY +++ LL NPGLKSRF + F D S ADA LL L ++ L S +A+++ LM +L A WSNGRDV T AK++ + + RL Sbjct: 2314 GKDPLDSFELNFAFVGAPGTGKTTVARRVGLLFQQLGLLGTDQVVECSAGDFVTGYVNQASGKTRQMFEKALGGVLFIDEAYRLNPKHGGAFMSEVLDEICQILTDQQFMGKMVVVLAGYEQQVEELLAVNPGLKSRFSERLAFPDFSVADAVQLLVLQLTGKQYGLELSPEAQQQLPGLMQELVAAPGWSNGRDVGTWAKRIFRAYSLRL 2524
BLAST of mRNA_M-pyrifera_M_contig98188.22612.1 vs. uniprot
Match: A0A150GQH9_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GQH9_GONPE) HSP 1 Score: 201 bits (511), Expect = 7.350e-56 Identity = 110/210 (52.38%), Postives = 144/210 (68.57%), Query Frame = 1 Query: 13 GEDVSKVVELTFLFTGSPGTGKTTVARKFGELFCGLGILSSSEVVETSASDFITGFVGQAAKRTREIFESAAGKVLFVDEAYALSPQKGGQFAGEALDEMTKLLTDEQFHGKMVVILAGYPNEIDLLLNSNPGLKSRFQSTVPFRDMSPADACTLLEKLLAASEFSLSVDAKEEC--VELMAQLSAFSDWSNGRDVKTLAKKMAKHLASR 636 G D + EL F F G+PGTGKTTVAR+ G+LF LG+L+ SE+V SASDF+TG+V QA+ +TRE+F+ A G VLF+DEAY L+P+ GG F EALDE+ +LLT+ F GKMVVILAGY ++I+ L++ NPGLKSRF + F D S ADA LL +L E+ L + A+ E L A+L A +WSNGRDV T K+ ++R Sbjct: 2135 GRDPLQSFELNFRFVGAPGTGKTTVARRVGQLFESLGLLAGSEMVSCSASDFVTGYVNQASGKTRELFKKAVGGVLFIDEAYRLNPKVGGPFMQEALDEIVQLLTEPAFMGKMVVILAGYEHQIEDLMSVNPGLKSRFSQRLHFPDFSAADAAALL-RLQLRKEYGLELVAEAEAGLEGLAAELVAAPNWSNGRDVGTWVKRAFTAFSTR 2343 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98188.22612.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig98188.22612.1 >prot_M-pyrifera_M_contig98188.22612.1 ID=prot_M-pyrifera_M_contig98188.22612.1|Name=mRNA_M-pyrifera_M_contig98188.22612.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=216bp MKGEDVSKVVELTFLFTGSPGTGKTTVARKFGELFCGLGILSSSEVVETSback to top mRNA from alignment at M-pyrifera_M_contig98188:9..662- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig98188.22612.1 ID=mRNA_M-pyrifera_M_contig98188.22612.1|Name=mRNA_M-pyrifera_M_contig98188.22612.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig98188:9..662- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig98188:9..662- >mRNA_M-pyrifera_M_contig98188.22612.1 ID=mRNA_M-pyrifera_M_contig98188.22612.1|Name=mRNA_M-pyrifera_M_contig98188.22612.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1296bp|location=Sequence derived from alignment at M-pyrifera_M_contig98188:9..662- (Macrocystis pyrifera P11B4 male)back to top |