mRNA_M-pyrifera_M_contig98103.22592.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig98103.22592.1
Unique NamemRNA_M-pyrifera_M_contig98103.22592.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig98103.22592.1 vs. uniprot
Match: A0A6B1B3B2_9ACTN (Mycofactocin biosynthesis FMN-dependent deaminase MftD n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1B3B2_9ACTN)

HSP 1 Score: 397 bits (1020), Expect = 3.290e-136
Identity = 189/234 (80.77%), Postives = 208/234 (88.89%), Query Frame = 1
Query:    1 KAAGATGLILTLDWSFSHGRDWGSPAIPQSFTLKELLPHAFDVVRKPAWAWSWVKSGDIPRLTVPNFATGDDEPPVFFEAYGTWMGTPPPTWEDVAWLRSQWDGPFMVKGVVRADEARRAVDAGATCLSVSNHGGNNVDGAPASIRMLPEIVAAVGDQVEVVLDGGVRRGSDVVKACALGADAVLIGRAYLWGLAANGQAGVENVLDILRGGIDATLRGIGVDSIADLTPDDLI 702
            KAAGA GLILTLDWSFSHGRDWGSP IPQSF  KE+LPHAF+V+ KPAW WSW++ G IPRL VPNFA  D++ P+FFEAYGTWM TPPPTWEDVAWLRSQWDGPFMVKG+ RADEARRAVDAGAT +SVSNHGGNNVD APASIR+L E+ AAVG+ +E+VLDGG+RRGSDVVKACALGADAVLIGRAYLWGLAANG AGVENVLDIL  GI ATLRGIG  SIA+LTP D++
Sbjct:  158 KAAGAVGLILTLDWSFSHGRDWGSPHIPQSFAPKEILPHAFEVLTKPAWCWSWLREGTIPRLRVPNFAGVDEQAPLFFEAYGTWMTTPPPTWEDVAWLRSQWDGPFMVKGIARADEARRAVDAGATTISVSNHGGNNVDSAPASIRVLAEVAAAVGNDIEIVLDGGIRRGSDVVKACALGADAVLIGRAYLWGLAANGAAGVENVLDILNAGIKATLRGIGKASIAELTPADVV 391          
BLAST of mRNA_M-pyrifera_M_contig98103.22592.1 vs. uniprot
Match: A0A2E6E1S0_9ACTN (Alpha-hydroxy-acid oxidizing enzyme n=8 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E6E1S0_9ACTN)

HSP 1 Score: 388 bits (997), Expect = 6.850e-133
Identity = 187/234 (79.91%), Postives = 204/234 (87.18%), Query Frame = 1
Query:    1 KAAGATGLILTLDWSFSHGRDWGSPAIPQSFTLKELLPHAFDVVRKPAWAWSWVKSGDIPRLTVPNFATGDDEPPVFFEAYGTWMGTPPPTWEDVAWLRSQWDGPFMVKGVVRADEARRAVDAGATCLSVSNHGGNNVDGAPASIRMLPEIVAAVGDQVEVVLDGGVRRGSDVVKACALGADAVLIGRAYLWGLAANGQAGVENVLDILRGGIDATLRGIGVDSIADLTPDDLI 702
            KAAGA G+ILTLDWSFSHGRDWGSP IPQSFT+KELLP    V+RKP + WSW+KSG IP+L VPNF T   +PPVFFEAYG WM T PPTWEDVAWLRSQWDG FMVKGVVRADEARRAVDAG T +SVSNHGGNNVD APASIR+LPEI AAVGD ++VV+DGG+RRGSDVVKA  LGADAVLIGRAYLWGLAANG AGVENVLD++RGGIDAT+RGIGV SI DLT D +I
Sbjct:  146 KAAGAVGMILTLDWSFSHGRDWGSPQIPQSFTIKELLPQVPAVIRKPRFMWSWIKSGSIPKLGVPNFVTDGSKPPVFFEAYGAWMMTSPPTWEDVAWLRSQWDGEFMVKGVVRADEARRAVDAGVTAISVSNHGGNNVDSAPASIRVLPEIAAAVGDDIQVVMDGGIRRGSDVVKALCLGADAVLIGRAYLWGLAANGTAGVENVLDVIRGGIDATMRGIGVGSIHDLTADHVI 379          
BLAST of mRNA_M-pyrifera_M_contig98103.22592.1 vs. uniprot
Match: A0A7X6ANZ8_9ACTN (Mycofactocin biosynthesis FMN-dependent deaminase MftD n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6ANZ8_9ACTN)

HSP 1 Score: 374 bits (961), Expect = 1.940e-127
Identity = 181/234 (77.35%), Postives = 202/234 (86.32%), Query Frame = 1
Query:    1 KAAGATGLILTLDWSFSHGRDWGSPAIPQSFTLKELLPHAFDVVRKPAWAWSWVKSGDIPRLTVPNFATGDDEPPVFFEAYGTWMGTPPPTWEDVAWLRSQWDGPFMVKGVVRADEARRAVDAGATCLSVSNHGGNNVDGAPASIRMLPEIVAAVGDQVEVVLDGGVRRGSDVVKACALGADAVLIGRAYLWGLAANGQAGVENVLDILRGGIDATLRGIGVDSIADLTPDDLI 702
            + AGA GLILTLDWSFSHGRDWGSP IPQ+F L+ +L HA +V+ +P W  SW+++G +P L VPNF  GD   P FFEAYGTWMGTPP TW+DVAWLR QWDGPFMVKGV R DEARRAV+AGATC+SVSNHGGNNVDGAPA IR+LPEIVA VGD+VEVVLDGG+RRGSDVVKA ALGA AVLIGRAYLWGLAANGQAGVENVLDILR GIDAT+RGIG  S+ +LTPDDL+
Sbjct:  146 ERAGAVGLILTLDWSFSHGRDWGSPDIPQAFDLRTILRHAPEVLARPRWLASWLRTGRLPMLGVPNFPVGDQPVPGFFEAYGTWMGTPPATWDDVAWLRGQWDGPFMVKGVHRPDEARRAVEAGATCISVSNHGGNNVDGAPAPIRVLPEIVAEVGDEVEVVLDGGIRRGSDVVKAVALGARAVLIGRAYLWGLAANGQAGVENVLDILRNGIDATMRGIGRASLEELTPDDLV 379          
BLAST of mRNA_M-pyrifera_M_contig98103.22592.1 vs. uniprot
Match: A0A848UF17_9ACTN (Mycofactocin biosynthesis FMN-dependent deaminase MftD n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A848UF17_9ACTN)

HSP 1 Score: 358 bits (918), Expect = 6.990e-121
Identity = 177/235 (75.32%), Postives = 196/235 (83.40%), Query Frame = 1
Query:    1 KAAGATGLILTLDWSFSHGRDWGSPAIPQSFTLKELLPHAFDVVRKPAWAWSWVKSGDIPRLTVPNFATGDDEPPVFFEAYGTWMGTPPPTWEDVAWLRSQW-DGPFMVKGVVRADEARRAVDAGATCLSVSNHGGNNVDGAPASIRMLPEIVAAVGDQVEVVLDGGVRRGSDVVKACALGADAVLIGRAYLWGLAANGQAGVENVLDILRGGIDATLRGIGVDSIADLTPDDLI 702
            KAAGA GLILTLDWSF H RDWGSP IPQS  L+ ++  A +VVRKP W   WV+SG +P L VPNFA GD   P FFEAYGTWMGTPPPTW+DVAWLR QW D PFMVKG+ R DEARRAVDAGA+ +SVSNHGGNN+DG PA IR+LPEI AAVGDQ+EVV+DGGVRRGSDVVKA ALGA AVLIGRAYLWGLAANGQAGVENVLD+LR GID++L G+G  SI +L PDDLI
Sbjct:  146 KAAGAVGLILTLDWSFVHSRDWGSPTIPQSIDLRTMVQFAPEVVRKPQWLLEWVRSGSLPDLGVPNFAVGDQPVPGFFEAYGTWMGTPPPTWDDVAWLREQWGDLPFMVKGIGRPDEARRAVDAGASAISVSNHGGNNLDGTPAPIRVLPEIAAAVGDQIEVVMDGGVRRGSDVVKALALGARAVLIGRAYLWGLAANGQAGVENVLDVLRMGIDSSLLGLGKASIGELGPDDLI 380          
BLAST of mRNA_M-pyrifera_M_contig98103.22592.1 vs. uniprot
Match: A0A7Y2DUD9_9ACTN (Mycofactocin biosynthesis FMN-dependent deaminase MftD n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DUD9_9ACTN)

HSP 1 Score: 353 bits (906), Expect = 3.670e-119
Identity = 171/232 (73.71%), Postives = 198/232 (85.34%), Query Frame = 1
Query:    7 AGATGLILTLDWSFSHGRDWGSPAIPQSFTLKELLPHAFDVVRKPAWAWSWVKSGDIPRLTVPNFATGDDEPPVFFEAYGTWMGTPPPTWEDVAWLRSQWDGPFMVKGVVRADEARRAVDAGATCLSVSNHGGNNVDGAPASIRMLPEIVAAVGDQVEVVLDGGVRRGSDVVKACALGADAVLIGRAYLWGLAANGQAGVENVLDILRGGIDATLRGIGVDSIADLTPDDLI 702
            AG+ G ILTLDWSFSHGRDWGSP IPQS  LK  + HA +V+ +P W + W++SG +P+L VPNF  GD   P FFEAYGTWMGTPPPTW+DVAWLRSQ +GPFMVKG+ RADEARRAV+AGAT +SVSNHGGNN+DGA + +R+LPEIVAAVGD VEV++DGG+RRGSDVVKA ALGA+AVLIGRAYLWGLAANGQAGVENVLDILR GID+TL G+G  SI DL+ DDL+
Sbjct:  147 AGSVGTILTLDWSFSHGRDWGSPDIPQSLDLKTAVTHAPEVLMRPRWLYDWLRSGSLPQLGVPNFKVGD-RIPGFFEAYGTWMGTPPPTWDDVAWLRSQVEGPFMVKGIHRADEARRAVEAGATAISVSNHGGNNLDGAVSPLRVLPEIVAAVGDDVEVLMDGGIRRGSDVVKAVALGANAVLIGRAYLWGLAANGQAGVENVLDILRNGIDSTLYGLGTSSIGDLSSDDLV 377          
BLAST of mRNA_M-pyrifera_M_contig98103.22592.1 vs. uniprot
Match: A0A6C7EC43_ILUCY (Putative FMN-dependent alpha-hydroxy acid dehydrogenase n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7EC43_ILUCY)

HSP 1 Score: 352 bits (904), Expect = 1.060e-118
Identity = 171/235 (72.77%), Postives = 192/235 (81.70%), Query Frame = 1
Query:    1 KAAGATGLILTLDWSFSHGRDWGSPAIPQSFTLKELLPHAFDVVRKPAWAWSWVKSGDIPRLTVPNFATGDDEP-PVFFEAYGTWMGTPPPTWEDVAWLRSQWDGPFMVKGVVRADEARRAVDAGATCLSVSNHGGNNVDGAPASIRMLPEIVAAVGDQVEVVLDGGVRRGSDVVKACALGADAVLIGRAYLWGLAANGQAGVENVLDILRGGIDATLRGIGVDSIADLTPDDLI 702
            K AGA G ILTLDWSF H RDWGSP IP S  L  +L H  +V  +P W   WV+SG +P L VPNF T    P P FFEAYG WMGTPPPTW+D+AWLR QWDGPFMVKG+ RADEARRAVDAGAT +SVS HGGNN+DGAPA IR+LPE+VAAVGDQVEV++DGG+RRGSDVVKA ALGA AVLIGRAYLWGLAANGQAGVENVLD+LR GID+ L G+G  SIA+L+PDDL+
Sbjct:  150 KEAGAVGAILTLDWSFVHSRDWGSPPIPASIDLMTMLRHGPEVALRPRWLLDWVRSGALPALGVPNFPTDPSAPVPGFFEAYGVWMGTPPPTWDDIAWLREQWDGPFMVKGIARADEARRAVDAGATAISVSTHGGNNLDGAPAPIRVLPEVVAAVGDQVEVLMDGGIRRGSDVVKAVALGAKAVLIGRAYLWGLAANGQAGVENVLDVLRMGIDSYLLGMGKSSIAELSPDDLV 384          
BLAST of mRNA_M-pyrifera_M_contig98103.22592.1 vs. uniprot
Match: UPI00034AB7E8 (mycofactocin biosynthesis FMN-dependent deaminase MftD n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI00034AB7E8)

HSP 1 Score: 345 bits (886), Expect = 5.510e-116
Identity = 161/235 (68.51%), Postives = 195/235 (82.98%), Query Frame = 1
Query:    1 KAAGATGLILTLDWSFSHGRDWGSPAIPQSFTLKELLPHAFDVVRKPAWAWSWVKSGDIPRLTVPNFATGDDEP-PVFFEAYGTWMGTPPPTWEDVAWLRSQWDGPFMVKGVVRADEARRAVDAGATCLSVSNHGGNNVDGAPASIRMLPEIVAAVGDQVEVVLDGGVRRGSDVVKACALGADAVLIGRAYLWGLAANGQAGVENVLDILRGGIDATLRGIGVDSIADLTPDDLI 702
            K+ GA G+ILTLDWSF H RDWGSP+IP++  L+ ++ HA + + +P W   WV+SG +P+L VPNF   +D+P P FF+AYG WMGTPPPTW+DVAWLRSQWDGPFMVKG+ RADEARRA DAGAT +SVS H GNN+DG PA IR+LPE+V AVGD++EVV+D G+RRGSDVVKA ALGA AV+IGRAYLWGLAANGQAGVENVLD+LR GID+ + G+G  SIADL+ DD+I
Sbjct:  150 KSNGAVGMILTLDWSFVHSRDWGSPSIPEAIDLQTMVKHAPEAILRPRWLLDWVRSGSLPQLGVPNFPVSEDDPVPGFFDAYGVWMGTPPPTWDDVAWLRSQWDGPFMVKGINRADEARRAADAGATAISVSTHAGNNIDGTPAPIRVLPEVVDAVGDEIEVVMDSGIRRGSDVVKALALGAKAVMIGRAYLWGLAANGQAGVENVLDVLRMGIDSNMLGLGKASIADLSADDII 384          
BLAST of mRNA_M-pyrifera_M_contig98103.22592.1 vs. uniprot
Match: A0A4R7I729_9ACTN (L-lactate dehydrogenase (Cytochrome) n=2 Tax=Acidimicrobiales TaxID=84993 RepID=A0A4R7I729_9ACTN)

HSP 1 Score: 345 bits (884), Expect = 8.540e-116
Identity = 162/234 (69.23%), Postives = 190/234 (81.20%), Query Frame = 1
Query:    1 KAAGATGLILTLDWSFSHGRDWGSPAIPQSFTLKELLPHAFDVVRKPAWAWSWVKSGDIPRLTVPNFATGDDEPPVFFEAYGTWMGTPPPTWEDVAWLRSQWDGPFMVKGVVRADEARRAVDAGATCLSVSNHGGNNVDGAPASIRMLPEIVAAVGDQVEVVLDGGVRRGSDVVKACALGADAVLIGRAYLWGLAANGQAGVENVLDILRGGIDATLRGIGVDSIADLTPDDLI 702
            KA GA GLI+TLDWSF H RDWGSP IPQ  +L+ +  HA +V  KP W W WV++G +P L VPNF    +  P FFEAYGTWMGTPPPTW+D+AWLR QW G FMVKG++R DEA+RAVDAGAT +SVSNHGGNN+DG P+ +R+LP I AAVGDQV+VV+DGG+RRGSDVVKA ALGA A +IGRAYLWGLAANGQAGVENVLDILR GID+ + G+G  SI DL+PDDL+
Sbjct:  146 KANGAVGLIVTLDWSFVHSRDWGSPDIPQDMSLRTMAKHAPEVAVKPLWLWEWVRTGALPGLGVPNFVQPGERVPGFFEAYGTWMGTPPPTWDDIAWLREQWGGEFMVKGIMRVDEAKRAVDAGATAISVSNHGGNNLDGTPSPMRVLPGIAAAVGDQVDVVMDGGIRRGSDVVKALALGAKATMIGRAYLWGLAANGQAGVENVLDILRMGIDSAMLGLGRSSIDDLSPDDLL 379          
BLAST of mRNA_M-pyrifera_M_contig98103.22592.1 vs. uniprot
Match: A0A4V3FT41_9PSEU (L-lactate dehydrogenase (Cytochrome)/glycolate oxidase n=1 Tax=Actinophytocola oryzae TaxID=502181 RepID=A0A4V3FT41_9PSEU)

HSP 1 Score: 344 bits (883), Expect = 1.130e-115
Identity = 160/234 (68.38%), Postives = 192/234 (82.05%), Query Frame = 1
Query:    1 KAAGATGLILTLDWSFSHGRDWGSPAIPQSFTLKELLPHAFDVVRKPAWAWSWVKSGDIPRLTVPNFATGDDEPPVFFEAYGTWMGTPPPTWEDVAWLRSQWDGPFMVKGVVRADEARRAVDAGATCLSVSNHGGNNVDGAPASIRMLPEIVAAVGDQVEVVLDGGVRRGSDVVKACALGADAVLIGRAYLWGLAANGQAGVENVLDILRGGIDATLRGIGVDSIADLTPDDLI 702
            +AAG  G+ILTLDWSFSH RDWGSP IP+  T++E L  A   + +P W W++++SG +P LTVPN ATG   PP FF AYG WM TPPP+WEDV WLR QWDGPF++KGV R DEARRAVDAG + +SVSNHGGNN+DG PA+IR LP +VAAVGDQVEV+LDGG+RRGSDVVKA ALGA AV+IGRAYLWGLAA GQAGVENVLD+LR GID+T+  +G D++ DL+PDD++
Sbjct:  144 RAAGVVGVILTLDWSFSHSRDWGSPHIPERLTVREALRFAPQALARPRWLWAYLRSGRVPDLTVPNMATGGQAPPAFFGAYGQWMQTPPPSWEDVRWLREQWDGPFLLKGVYRPDEARRAVDAGVSAISVSNHGGNNLDGTPATIRALPAVVAAVGDQVEVLLDGGIRRGSDVVKAVALGARAVMIGRAYLWGLAAGGQAGVENVLDVLRAGIDSTVLALGHDNVHDLSPDDVL 377          
BLAST of mRNA_M-pyrifera_M_contig98103.22592.1 vs. uniprot
Match: UPI0013D827ED (mycofactocin biosynthesis FMN-dependent deaminase MftD n=1 Tax=Fodinicola acaciae TaxID=2681555 RepID=UPI0013D827ED)

HSP 1 Score: 340 bits (871), Expect = 8.000e-114
Identity = 162/234 (69.23%), Postives = 188/234 (80.34%), Query Frame = 1
Query:    1 KAAGATGLILTLDWSFSHGRDWGSPAIPQSFTLKELLPHAFDVVRKPAWAWSWVKSGDIPRLTVPNFATGDDEPPVFFEAYGTWMGTPPPTWEDVAWLRSQWDGPFMVKGVVRADEARRAVDAGATCLSVSNHGGNNVDGAPASIRMLPEIVAAVGDQVEVVLDGGVRRGSDVVKACALGADAVLIGRAYLWGLAANGQAGVENVLDILRGGIDATLRGIGVDSIADLTPDDLI 702
            + AGA G+ILTLDWSFSH RDWGSP IP+   ++E L  A + + +P W WS+V++G IP LTVPN A   + PP FF AYG WM TPPPTW+DV WLR QWDGPFM+KGV R DEARRAVDAG T +SVSNHGGNN+DG PA+IR LP +  AVGDQVEV+LDGG+RRGSDVVKA ALGA AV+IGRAYLWGLAANGQAGVENVLDILR GID+TL  +G  SI DL+ DD++
Sbjct:  146 RKAGAVGIILTLDWSFSHSRDWGSPHIPERLNVREALRFAPETLARPGWLWSYVRTGHIPDLTVPNMAAPGEPPPTFFGAYGQWMMTPPPTWDDVRWLREQWDGPFMLKGVYRPDEARRAVDAGVTAISVSNHGGNNLDGTPATIRTLPAVAEAVGDQVEVLLDGGIRRGSDVVKAVALGARAVMIGRAYLWGLAANGQAGVENVLDILRNGIDSTLLALGHRSIHDLSSDDVL 379          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98103.22592.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6B1B3B2_9ACTN3.290e-13680.77Mycofactocin biosynthesis FMN-dependent deaminase ... [more]
A0A2E6E1S0_9ACTN6.850e-13379.91Alpha-hydroxy-acid oxidizing enzyme n=8 Tax=Acidim... [more]
A0A7X6ANZ8_9ACTN1.940e-12777.35Mycofactocin biosynthesis FMN-dependent deaminase ... [more]
A0A848UF17_9ACTN6.990e-12175.32Mycofactocin biosynthesis FMN-dependent deaminase ... [more]
A0A7Y2DUD9_9ACTN3.670e-11973.71Mycofactocin biosynthesis FMN-dependent deaminase ... [more]
A0A6C7EC43_ILUCY1.060e-11872.77Putative FMN-dependent alpha-hydroxy acid dehydrog... [more]
UPI00034AB7E85.510e-11668.51mycofactocin biosynthesis FMN-dependent deaminase ... [more]
A0A4R7I729_9ACTN8.540e-11669.23L-lactate dehydrogenase (Cytochrome) n=2 Tax=Acidi... [more]
A0A4V3FT41_9PSEU1.130e-11568.38L-lactate dehydrogenase (Cytochrome)/glycolate oxi... [more]
UPI0013D827ED8.000e-11469.23mycofactocin biosynthesis FMN-dependent deaminase ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig98103contigM-pyrifera_M_contig98103:2..703 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score354.4
Seed ortholog evalue4.2e-95
Seed eggNOG ortholog1313172.YM304_36360
KEGG rclassRC00042,RC00044
KEGG koko:K00101,ko:K00104
KEGG ReactionR00196,R00475
KEGG Pathwayko00620,ko00630,ko01100,ko01110,ko01120,ko01130,map00620,map00630,map01100,map01110,map01120,map01130
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.FMN-dependent dehydrogenase
EggNOG OGs2GJA5@201174,4CNJE@84992,COG1304@1,COG1304@2
EC1.1.2.3,1.1.3.15
COG Functional cat.C
Best tax levelAcidimicrobiia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size702
Cds size702
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816898.5291312-CDS-M-pyrifera_M_contig98103:1..7031622816898.5291312-CDS-M-pyrifera_M_contig98103:1..703Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig98103 2..703 +
1692278243.614519-CDS-M-pyrifera_M_contig98103:1..7031692278243.614519-CDS-M-pyrifera_M_contig98103:1..703Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig98103 2..703 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig98103.22592.1prot_M-pyrifera_M_contig98103.22592.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig98103 2..703 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig98103.22592.1

>prot_M-pyrifera_M_contig98103.22592.1 ID=prot_M-pyrifera_M_contig98103.22592.1|Name=mRNA_M-pyrifera_M_contig98103.22592.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=234bp
KAAGATGLILTLDWSFSHGRDWGSPAIPQSFTLKELLPHAFDVVRKPAWA
WSWVKSGDIPRLTVPNFATGDDEPPVFFEAYGTWMGTPPPTWEDVAWLRS
QWDGPFMVKGVVRADEARRAVDAGATCLSVSNHGGNNVDGAPASIRMLPE
IVAAVGDQVEVVLDGGVRRGSDVVKACALGADAVLIGRAYLWGLAANGQA
GVENVLDILRGGIDATLRGIGVDSIADLTPDDLI
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mRNA from alignment at M-pyrifera_M_contig98103:2..703+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig98103.22592.1 ID=mRNA_M-pyrifera_M_contig98103.22592.1|Name=mRNA_M-pyrifera_M_contig98103.22592.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=702bp|location=Sequence derived from alignment at M-pyrifera_M_contig98103:2..703+ (Macrocystis pyrifera P11B4 male)
AAGGCGGCCGGTGCCACCGGCCTGATCCTCACGCTCGACTGGTCGTTCTC TCATGGCCGCGACTGGGGGAGTCCGGCGATCCCGCAGTCGTTCACGCTCA AGGAACTGCTGCCCCACGCGTTCGACGTCGTCCGCAAGCCCGCGTGGGCC TGGAGCTGGGTGAAGTCCGGCGACATCCCCCGCCTCACCGTGCCCAACTT CGCGACCGGCGACGACGAGCCGCCCGTGTTCTTCGAGGCCTACGGCACCT GGATGGGCACGCCGCCCCCCACCTGGGAGGACGTGGCGTGGCTGCGTTCG CAGTGGGACGGACCGTTCATGGTCAAGGGCGTCGTGCGCGCCGACGAAGC CCGCCGGGCCGTCGATGCCGGCGCCACCTGTCTGTCGGTGTCCAACCACG GCGGCAACAATGTCGACGGCGCCCCGGCGTCGATTCGCATGCTCCCCGAG ATCGTGGCCGCCGTCGGCGACCAGGTCGAGGTCGTGCTCGACGGCGGCGT CCGCCGCGGGTCCGACGTGGTCAAGGCGTGCGCCCTCGGCGCCGACGCCG TCCTCATCGGCCGGGCCTACCTCTGGGGTCTCGCCGCCAACGGCCAGGCC GGTGTCGAGAACGTCCTCGACATCCTCCGCGGCGGCATCGACGCCACCCT GCGCGGGATCGGCGTCGACTCCATCGCCGACCTCACCCCCGACGACCTCA TC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig98103:2..703+

>mRNA_M-pyrifera_M_contig98103.22592.1 ID=mRNA_M-pyrifera_M_contig98103.22592.1|Name=mRNA_M-pyrifera_M_contig98103.22592.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1404bp|location=Sequence derived from alignment at M-pyrifera_M_contig98103:2..703+ (Macrocystis pyrifera P11B4 male)
AAGGCGGCCGGTGCCACCGGCCTGATCCTCACGCTCGACTGGTCGTTCTC
TCATGGCCGCGACTGGGGGAGTCCGGCGATCCCGCAGTCGTTCACGCTCA
AGGAACTGCTGCCCCACGCGTTCGACGTCGTCCGCAAGCCCGCGTGGGCC
TGGAGCTGGGTGAAGTCCGGCGACATCCCCCGCCTCACCGTGCCCAACTT
CGCGACCGGCGACGACGAGCCGCCCGTGTTCTTCGAGGCCTACGGCACCT
GGATGGGCACGCCGCCCCCCACCTGGGAGGACGTGGCGTGGCTGCGTTCG
CAGTGGGACGGACCGTTCATGGTCAAGGGCGTCGTGCGCGCCGACGAAGC
CCGCCGGGCCGTCGATGCCGGCGCCACCTGTCTGTCGGTGTCCAACCACG
GCGGCAACAATGTCGACGGCGCCCCGGCGTCGATTCGCATGCTCCCCGAG
ATCGTGGCCGCCGTCGGCGACCAGGTCGAGGTCGTGCTCGACGGCGGCGT
CCGCCGCGGGTCCGACGTGGTCAAGGCGTGCGCCCTCGGCGCCGACGCCG
TCCTCATCGGCCGGGCCTACCTCTGGGGTCTCGCCGCCAACGGCCAGGCC
GGTGTCGAGAACGTCCTCGACATCCTCCGCGGCGGCATCGACGCCACCCT
GCGCGGGATCGGCGTCGACTCCATCGCCGACCTCACCCCCGACGACCTCA
TCAAGGCGGCCGGTGCCACCGGCCTGATCCTCACGCTCGACTGGTCGTTC
TCTCATGGCCGCGACTGGGGGAGTCCGGCGATCCCGCAGTCGTTCACGCT
CAAGGAACTGCTGCCCCACGCGTTCGACGTCGTCCGCAAGCCCGCGTGGG
CCTGGAGCTGGGTGAAGTCCGGCGACATCCCCCGCCTCACCGTGCCCAAC
TTCGCGACCGGCGACGACGAGCCGCCCGTGTTCTTCGAGGCCTACGGCAC
CTGGATGGGCACGCCGCCCCCCACCTGGGAGGACGTGGCGTGGCTGCGTT
CGCAGTGGGACGGACCGTTCATGGTCAAGGGCGTCGTGCGCGCCGACGAA
GCCCGCCGGGCCGTCGATGCCGGCGCCACCTGTCTGTCGGTGTCCAACCA
CGGCGGCAACAATGTCGACGGCGCCCCGGCGTCGATTCGCATGCTCCCCG
AGATCGTGGCCGCCGTCGGCGACCAGGTCGAGGTCGTGCTCGACGGCGGC
GTCCGCCGCGGGTCCGACGTGGTCAAGGCGTGCGCCCTCGGCGCCGACGC
CGTCCTCATCGGCCGGGCCTACCTCTGGGGTCTCGCCGCCAACGGCCAGG
CCGGTGTCGAGAACGTCCTCGACATCCTCCGCGGCGGCATCGACGCCACC
CTGCGCGGGATCGGCGTCGACTCCATCGCCGACCTCACCCCCGACGACCT
CATC
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