mRNA_M-pyrifera_M_contig9810.22591.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig9810.22591.1
Unique NamemRNA_M-pyrifera_M_contig9810.22591.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig9810.22591.1 vs. uniprot
Match: D8LQA7_ECTSI (N-acetyltransferase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQA7_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 1.190e-22
Identity = 43/57 (75.44%), Postives = 50/57 (87.72%), Query Frame = 1 
Query:    1 PYLSDLAVANRFKRRGAGTELVRACEAACLRWGYDSMYLKVKARNVAAVKLYENLGY 171
            PYLSDLAVA+R++R G GTELV+ACE AC+ WGYD+MYLKV+  NVAA KLYENLGY
Sbjct:  185 PYLSDLAVADRYRRMGIGTELVKACEDACIEWGYDNMYLKVREGNVAAEKLYENLGY 241
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BLAST of mRNA_M-pyrifera_M_contig9810.22591.1 vs. uniprot
Match: A0A856MQW7_9CYAN (GNAT family N-acetyltransferase n=6 Tax=Scytonemataceae TaxID=1182 RepID=A0A856MQW7_9CYAN)

HSP 1 Score: 62.4 bits (150), Expect = 1.360e-10
Identity = 27/57 (47.37%), Postives = 38/57 (66.67%), Query Frame = 1 
Query:    1 PYLSDLAVANRFKRRGAGTELVRACEAACLRWGYDSMYLKVKARNVAAVKLYENLGY 171
            PYLS+LA+  +++R+GA + L+ ACE  CL WG+  +YL V   N  A +LY  LGY
Sbjct:   91 PYLSNLAIDPKYRRQGAASGLLTACEKVCLSWGFQDLYLHVLENNYQARQLYFKLGY 147
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BLAST of mRNA_M-pyrifera_M_contig9810.22591.1 vs. uniprot
Match: A0A7S2WDB0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDB0_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 2.290e-10
Identity = 30/58 (51.72%), Postives = 39/58 (67.24%), Query Frame = 1 
Query:    1 PYLSDLAVANRFKRRGAGTELVRACEA-ACLRWGYDSMYLKVKARNVAAVKLYENLGY 171
            PYL ++AV  RF+RRG G  LVRACEA A  +W Y ++YL V   N  A++LY+  GY
Sbjct:   46 PYLCNVAVDRRFRRRGLGVRLVRACEALAQFQWRYSAIYLHVDKSNRGALELYQQRGY 103
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BLAST of mRNA_M-pyrifera_M_contig9810.22591.1 vs. uniprot
Match: A0A846ADR3_9CYAN (GNAT family N-acetyltransferase n=1 Tax=Leptolyngbya sp. SIO4C5 TaxID=2607774 RepID=A0A846ADR3_9CYAN)

HSP 1 Score: 62.0 bits (149), Expect = 2.680e-10
Identity = 27/57 (47.37%), Postives = 39/57 (68.42%), Query Frame = 1 
Query:    1 PYLSDLAVANRFKRRGAGTELVRACEAACLRWGYDSMYLKVKARNVAAVKLYENLGY 171
            PY+S+LAV  +F+RRGA  +L++ACE A   WG+ ++YL V   N  A +LY  +GY
Sbjct:  113 PYVSNLAVDQKFRRRGAARQLLQACEQAARSWGFHTLYLHVMEDNQQARQLYSKMGY 169
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BLAST of mRNA_M-pyrifera_M_contig9810.22591.1 vs. uniprot
Match: UPI001F552BC4 (GNAT family N-acetyltransferase n=2 Tax=Nostoc sp. FACHB-110 TaxID=2692834 RepID=UPI001F552BC4)

HSP 1 Score: 61.2 bits (147), Expect = 6.560e-10
Identity = 27/57 (47.37%), Postives = 38/57 (66.67%), Query Frame = 1 
Query:    1 PYLSDLAVANRFKRRGAGTELVRACEAACLRWGYDSMYLKVKARNVAAVKLYENLGY 171
            PYLS+LAVA++++R G  ++L+ +CE  C  WGY  +YL V   N  A +LY  LGY
Sbjct:  127 PYLSNLAVAHKYRRHGVASKLLTSCEDICREWGYQDLYLHVLEDNHQARQLYCKLGY 183
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BLAST of mRNA_M-pyrifera_M_contig9810.22591.1 vs. uniprot
Match: UPI001FBB370F (GNAT family N-acetyltransferase n=1 Tax=Aetokthonos hydrillicola TaxID=1550245 RepID=UPI001FBB370F)

HSP 1 Score: 60.1 bits (144), Expect = 1.730e-9
Identity = 28/57 (49.12%), Postives = 38/57 (66.67%), Query Frame = 1 
Query:    1 PYLSDLAVANRFKRRGAGTELVRACEAACLRWGYDSMYLKVKARNVAAVKLYENLGY 171
            PYLS+LAV  +++R+GA +EL+ ACE   L WG+  +YL V   N  A +LY  LGY
Sbjct:  127 PYLSNLAVHPKYRRQGAASELLAACEKVALSWGFHDLYLHVLEDNHQARELYFKLGY 183
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BLAST of mRNA_M-pyrifera_M_contig9810.22591.1 vs. uniprot
Match: A0A0D8ZZ74_9CYAN (N-acetyltransferase domain-containing protein n=1 Tax=Aliterella atlantica CENA595 TaxID=1618023 RepID=A0A0D8ZZ74_9CYAN)

HSP 1 Score: 59.7 bits (143), Expect = 2.220e-9
Identity = 28/57 (49.12%), Postives = 36/57 (63.16%), Query Frame = 1 
Query:    1 PYLSDLAVANRFKRRGAGTELVRACEAACLRWGYDSMYLKVKARNVAAVKLYENLGY 171
            PYLS+LAV +R +RRG G +L+  CE   L WG+  +YL V   N  A +LY  LGY
Sbjct:  122 PYLSNLAVHSRDRRRGIGEQLLLTCERTALEWGFHDIYLHVLENNYQARQLYFKLGY 178
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BLAST of mRNA_M-pyrifera_M_contig9810.22591.1 vs. uniprot
Match: UPI001F39BD3B (GNAT family N-acetyltransferase n=1 Tax=Calothrix rhizosoleniae TaxID=888997 RepID=UPI001F39BD3B)

HSP 1 Score: 59.3 bits (142), Expect = 3.680e-9
Identity = 26/57 (45.61%), Postives = 37/57 (64.91%), Query Frame = 1 
Query:    1 PYLSDLAVANRFKRRGAGTELVRACEAACLRWGYDSMYLKVKARNVAAVKLYENLGY 171
            PYLS+LAV  +++R+GA + L++AC+   L WG+  +YL V   N  A  LY  LGY
Sbjct:  133 PYLSNLAVNPQYRRQGAASSLLKACDQMALNWGFQDLYLHVLENNYQAQHLYFKLGY 189
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BLAST of mRNA_M-pyrifera_M_contig9810.22591.1 vs. uniprot
Match: UPI00145F2C41 (GNAT family N-acetyltransferase n=1 Tax=Brasilonema sp. UFV-L1 TaxID=2234130 RepID=UPI00145F2C41)

HSP 1 Score: 58.9 bits (141), Expect = 4.280e-9
Identity = 27/57 (47.37%), Postives = 38/57 (66.67%), Query Frame = 1 
Query:    1 PYLSDLAVANRFKRRGAGTELVRACEAACLRWGYDSMYLKVKARNVAAVKLYENLGY 171
            PYLS+LAV  +++R+GA + L++ACE   L WG+  +YL V   N  A +LY  LGY
Sbjct:  116 PYLSNLAVNPQYRRQGAASGLLKACEKVSLSWGFQDLYLHVLENNNQARQLYFKLGY 172
[Close]
BLAST of mRNA_M-pyrifera_M_contig9810.22591.1 vs. uniprot
Match: A0A8J6XF80_9CYAN (GNAT family N-acetyltransferase n=1 Tax=Iningainema tapete BLCC-T55 TaxID=2748662 RepID=A0A8J6XF80_9CYAN)

HSP 1 Score: 58.9 bits (141), Expect = 4.330e-9
Identity = 26/57 (45.61%), Postives = 38/57 (66.67%), Query Frame = 1 
Query:    1 PYLSDLAVANRFKRRGAGTELVRACEAACLRWGYDSMYLKVKARNVAAVKLYENLGY 171
            PYLS+LA+  +++R+GA ++L+ ACE   L WG+  +YL V   N  A +LY  LGY
Sbjct:  117 PYLSNLAIHPQYRRQGAASQLLAACEKVVLSWGFQDLYLHVLENNHQAWQLYFKLGY 173
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9810.22591.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQA7_ECTSI1.190e-2275.44N-acetyltransferase domain-containing protein n=2 ... [more]
A0A856MQW7_9CYAN1.360e-1047.37GNAT family N-acetyltransferase n=6 Tax=Scytonemat... [more]
A0A7S2WDB0_9STRA2.290e-1051.72Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A846ADR3_9CYAN2.680e-1047.37GNAT family N-acetyltransferase n=1 Tax=Leptolyngb... [more]
UPI001F552BC46.560e-1047.37GNAT family N-acetyltransferase n=2 Tax=Nostoc sp.... [more]
UPI001FBB370F1.730e-949.12GNAT family N-acetyltransferase n=1 Tax=Aetokthono... [more]
A0A0D8ZZ74_9CYAN2.220e-949.12N-acetyltransferase domain-containing protein n=1 ... [more]
UPI001F39BD3B3.680e-945.61GNAT family N-acetyltransferase n=1 Tax=Calothrix ... [more]
UPI00145F2C414.280e-947.37GNAT family N-acetyltransferase n=1 Tax=Brasilonem... [more]
A0A8J6XF80_9CYAN4.330e-945.61GNAT family N-acetyltransferase n=1 Tax=Iningainem... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9810contigM-pyrifera_M_contig9810:4405..4575 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score96.7
Seed ortholog evalue3.8e-18
Seed eggNOG ortholog2880.D8LQA7
Hectar predicted targeting categoryno signal peptide or anchor
EggNOG free text desc.FR47-like protein
EggNOG OGs2E48C@1,2SB6B@2759
Ec32 ortholog descriptionSecreted acetyltransferase (GNAT) domain protein
Ec32 orthologEc-26_005500.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size171
Cds size171
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816898.492627-CDS-M-pyrifera_M_contig9810:4404..45751622816898.492627-CDS-M-pyrifera_M_contig9810:4404..4575Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9810 4405..4575 +
1692278243.6028662-CDS-M-pyrifera_M_contig9810:4404..45751692278243.6028662-CDS-M-pyrifera_M_contig9810:4404..4575Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig9810 4405..4575 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9810.22591.1prot_M-pyrifera_M_contig9810.22591.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig9810 4405..4575 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig9810.22591.1

>prot_M-pyrifera_M_contig9810.22591.1 ID=prot_M-pyrifera_M_contig9810.22591.1|Name=mRNA_M-pyrifera_M_contig9810.22591.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=57bp
PYLSDLAVANRFKRRGAGTELVRACEAACLRWGYDSMYLKVKARNVAAVK
LYENLGY
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mRNA from alignment at M-pyrifera_M_contig9810:4405..4575+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig9810.22591.1 ID=mRNA_M-pyrifera_M_contig9810.22591.1|Name=mRNA_M-pyrifera_M_contig9810.22591.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=171bp|location=Sequence derived from alignment at M-pyrifera_M_contig9810:4405..4575+ (Macrocystis pyrifera P11B4 male)
CCATACTTGTCGGACCTCGCCGTAGCCAATCGGTTCAAGCGCAGGGGCGC
CGGGACTGAGCTGGTGCGAGCTTGCGAGGCGGCGTGCTTGCGGTGGGGGT
ATGACTCCATGTATCTCAAGGTTAAGGCGCGAAATGTTGCGGCCGTGAAG
CTGTACGAGAACCTCGGATAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig9810:4405..4575+

>mRNA_M-pyrifera_M_contig9810.22591.1 ID=mRNA_M-pyrifera_M_contig9810.22591.1|Name=mRNA_M-pyrifera_M_contig9810.22591.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=342bp|location=Sequence derived from alignment at M-pyrifera_M_contig9810:4405..4575+ (Macrocystis pyrifera P11B4 male)
CCATACTTGTCGGACCTCGCCGTAGCCAATCGGTTCAAGCGCAGGGGCGC
CGGGACTGAGCTGGTGCGAGCTTGCGAGGCGGCGTGCTTGCGGTGGGGGT
ATGACTCCATGTATCTCAAGGTTAAGGCGCGAAATGTTGCGGCCGTGAAG
CTGTACGAGAACCTCGGATACCCATACTTGTCGGACCTCGCCGTAGCCAA
TCGGTTCAAGCGCAGGGGCGCCGGGACTGAGCTGGTGCGAGCTTGCGAGG
CGGCGTGCTTGCGGTGGGGGTATGACTCCATGTATCTCAAGGTTAAGGCG
CGAAATGTTGCGGCCGTGAAGCTGTACGAGAACCTCGGATAC
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