mRNA_M-pyrifera_M_contig97695.22498.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig97695.22498.1
Unique NamemRNA_M-pyrifera_M_contig97695.22498.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig97695.22498.1 vs. uniprot
Match: A0A7S4M8J5_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4M8J5_9EUKA)

HSP 1 Score: 273 bits (699), Expect = 2.740e-87
Identity = 133/200 (66.50%), Postives = 155/200 (77.50%), Query Frame = 1 
Query:    1 VISSIHSEHVVKFYGGCFEPKICLVMEYCSNGSLYHLQQRENVDIDWGMCFRLLIETVTGIVALHAENPPIVHRDLKSLNLLVNSENRVKVCDFGLSRYTQGSGDNSTLGKLRGTYAYSAPEVYHGKPYSTKSDVYSIGVIMWELVARVINKSYLRPYKEYKHLRIDFQIIIASAKKGIRPTIPAS-CPASLRALIVRCW 597
            ++SS+ S HVVKF+GGC +PKICLVMEYCSNGSLYHL QR+ ++ DW + FRL  ETV G++ALH  +P +VHRDLKSLNLLVN E  VKVCDFGLSR  QGS D STLGKLRGTYAYSAPEVY G  Y+ KSDV+S+GVI+WE +AR+    Y RPYKEY + +IDFQIII SAK G RP +    CP SLR LI  CW
Sbjct:   78 IMSSVDSNHVVKFFGGCLQPKICLVMEYCSNGSLYHLFQRKELNFDWALLFRLCTETVEGVLALHNHHPQVVHRDLKSLNLLVNKEYSVKVCDFGLSRVIQGSQDESTLGKLRGTYAYSAPEVYKGDKYTDKSDVFSLGVILWEAIARIFTGEYQRPYKEYNY-KIDFQIIINSAKHGKRPKLGLDICPESLRNLITVCW 276
[Close]
BLAST of mRNA_M-pyrifera_M_contig97695.22498.1 vs. uniprot
Match: SPKA_DICDI (Stress-activated protein kinase alpha n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=SPKA_DICDI)

HSP 1 Score: 252 bits (644), Expect = 2.640e-77
Identity = 123/199 (61.81%), Postives = 150/199 (75.38%), Query Frame = 1 
Query:    1 VISSIHSEHVVKFYGGCFEPKICLVMEYCSNGSLYHLQQRENVDIDWGMCFRLLIETVTGIVALHAENPPIVHRDLKSLNLLVNSENRVKVCDFGLSRYTQGSGDNSTLGKLRGTYAYSAPEVYHGKPYSTKSDVYSIGVIMWELVARVINKSYLRPYKEYKHLRIDFQIIIASAKKGIRPTIPASCPASLRALIVRCW 597
            ++S+I S+HVV FYG   EPK+C+VME CS GSLYH+    ++DI W   FR  IETV GI  LH  +PPIVHRDLKSLNLLVN +  +KVCDFGLSR+  GS +  TL K+RGT+AY APEVY+G+ +S KSDVYSI VI+WELV R IN  Y RP+ EYK+L+ DFQIII +AKK +RPTIP +CP SL +LI  CW
Sbjct:  398 IMSAIRSKHVVHFYGAVLEPKLCMVMENCSRGSLYHVMDNNSLDIGWERTFRFAIETVRGIECLHKWDPPIVHRDLKSLNLLVNDKWEIKVCDFGLSRFNTGS-NLETLVKMRGTFAYCAPEVYYGEQFSGKSDVYSIAVILWELVTRCINGRYERPFSEYKNLQHDFQIIIQTAKKNLRPTIPNACPESLVSLIQDCW 595
[Close]
BLAST of mRNA_M-pyrifera_M_contig97695.22498.1 vs. uniprot
Match: F4PJM3_CAVFA (Ankyrin repeat-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PJM3_CAVFA)

HSP 1 Score: 247 bits (630), Expect = 2.040e-76
Identity = 119/199 (59.80%), Postives = 146/199 (73.37%), Query Frame = 1 
Query:    1 VISSIHSEHVVKFYGGCFEPKICLVMEYCSNGSLYHLQQRENVDIDWGMCFRLLIETVTGIVALHAENPPIVHRDLKSLNLLVNSENRVKVCDFGLSRYTQGSGDNSTLGKLRGTYAYSAPEVYHGKPYSTKSDVYSIGVIMWELVARVINKSYLRPYKEYKHLRIDFQIIIASAKKGIRPTIPASCPASLRALIVRCW 597
            ++S+I S++VV FYG    P++C+VME C  GSLYH+   E  DI W   FR  IET  GI  LH  NP IVHRDLKSLNLLVN +  VKVCDFGLSR+  GS +  TL K+RGT+AY APEVY G+ +S KSDVYSIG+I+WELV R IN  Y RP+ E+K+L+ DFQIII +AK+G+RPTIP +CPA+  ALI  CW
Sbjct:  273 IMSAIRSKYVVNFYGAVLTPRLCMVMENCGRGSLYHVMNNEKYDIGWDSTFRFAIETARGIECLHKWNPQIVHRDLKSLNLLVNDKWEVKVCDFGLSRFNTGS-NMETLTKMRGTFAYCAPEVYFGEQFSVKSDVYSIGMILWELVTRCINCRYERPFSEFKNLQHDFQIIIQTAKRGLRPTIPPACPANFAALINNCW 470
[Close]
BLAST of mRNA_M-pyrifera_M_contig97695.22498.1 vs. uniprot
Match: D3B860_POLPP (Ankyrin repeat-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B860_POLPP)

HSP 1 Score: 243 bits (621), Expect = 1.930e-75
Identity = 116/199 (58.29%), Postives = 144/199 (72.36%), Query Frame = 1 
Query:    1 VISSIHSEHVVKFYGGCFEPKICLVMEYCSNGSLYHLQQRENVDIDWGMCFRLLIETVTGIVALHAENPPIVHRDLKSLNLLVNSENRVKVCDFGLSRYTQGSGDNSTLGKLRGTYAYSAPEVYHGKPYSTKSDVYSIGVIMWELVARVINKSYLRPYKEYKHLRIDFQIIIASAKKGIRPTIPASCPASLRALIVRCW 597
            ++S+I S+HVV FYG   EPK C+VME CSNGSLYH+   E +DI W   FR  +ET  G+  LH+ NP IVHRDLKSLNLLVN +  +KVCDFGLSR+  GS +  TL K+RGT AY APE+Y G+ +S KSDVYSIG+I+WELV R ++  Y RP+ EY +L+ DFQIII ++KK +RPTIPA CP     LI  CW
Sbjct:  244 IMSAIRSKHVVHFYGAVLEPKPCMVMENCSNGSLYHVMNNEKLDIRWEKTFRFALETARGLDCLHSWNPQIVHRDLKSLNLLVNDKWEIKVCDFGLSRFNTGS-NMETLAKMRGTMAYCAPEIYFGEQFSIKSDVYSIGMILWELVTRCVHGRYERPFSEYTNLQHDFQIIIQTSKKALRPTIPAECPPKFAQLIRECW 441
[Close]
BLAST of mRNA_M-pyrifera_M_contig97695.22498.1 vs. uniprot
Match: A0A8J4PR25_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PR25_9MYCE)

HSP 1 Score: 245 bits (626), Expect = 1.370e-74
Identity = 120/199 (60.30%), Postives = 148/199 (74.37%), Query Frame = 1 
Query:    1 VISSIHSEHVVKFYGGCFEPKICLVMEYCSNGSLYHLQQRENVDIDWGMCFRLLIETVTGIVALHAENPPIVHRDLKSLNLLVNSENRVKVCDFGLSRYTQGSGDNSTLGKLRGTYAYSAPEVYHGKPYSTKSDVYSIGVIMWELVARVINKSYLRPYKEYKHLRIDFQIIIASAKKGIRPTIPASCPASLRALIVRCW 597
            ++S+I S+HVV FYG   EPK+C+VME C  GSLYH+ + E++DI W   FR  +ETV GI  LH   P IVHRDLKSLNLLVN +  VKVCDFGLSR+  GS +  TL K+RGT+AY APEVY G+ +S+KSDVYSI +I+WELV R IN  Y RP+ E+K+L  DFQIII +AKKG+RP+IP +CP SL  LI  CW
Sbjct:  404 IMSAIRSKHVVLFYGAVLEPKLCMVMENCGRGSLYHVMKDESLDIRWEKTFRFALETVKGIECLHNWEPSIVHRDLKSLNLLVNDKWEVKVCDFGLSRFNTGS-NLETLVKMRGTFAYCAPEVYFGEQFSSKSDVYSIAMILWELVTRCINGRYERPFSEFKNLHHDFQIIIQTAKKGLRPSIPKACPQSLALLIQDCW 601
[Close]
BLAST of mRNA_M-pyrifera_M_contig97695.22498.1 vs. uniprot
Match: A0A152A133_9MYCE (Ankyrin repeat-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A133_9MYCE)

HSP 1 Score: 243 bits (619), Expect = 1.420e-73
Identity = 117/199 (58.79%), Postives = 144/199 (72.36%), Query Frame = 1 
Query:    1 VISSIHSEHVVKFYGGCFEPKICLVMEYCSNGSLYHLQQRENVDIDWGMCFRLLIETVTGIVALHAENPPIVHRDLKSLNLLVNSENRVKVCDFGLSRYTQGSGDNSTLGKLRGTYAYSAPEVYHGKPYSTKSDVYSIGVIMWELVARVINKSYLRPYKEYKHLRIDFQIIIASAKKGIRPTIPASCPASLRALIVRCW 597
            ++S+I S++VV FYG   EPK+C+VME CS GSLYH+   +  DI W   FR  IE V GI  LH   PPI HRDLKSLNLLVN +  +KVCDFGLSR+  GS +  TL ++RGT+AY  PEVYHG+ +S KSDVYSI +I+WELV R IN  Y RP+ E+K+L+ DFQIII +AKK +RPTIP +CP SL  LI  CW
Sbjct:  402 IMSAIRSKYVVHFYGAVLEPKLCMVMENCSRGSLYHVMNSDKYDIGWDKTFRFAIEMVKGIECLHKWEPPIFHRDLKSLNLLVNEKWEIKVCDFGLSRFNTGS-NLQTLVQMRGTFAYCGPEVYHGQQFSAKSDVYSIAMILWELVTRCINARYERPFSEFKNLQHDFQIIIQTAKKNLRPTIPPTCPPSLVELIKTCW 599
[Close]
BLAST of mRNA_M-pyrifera_M_contig97695.22498.1 vs. uniprot
Match: F0ZY14_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZY14_DICPU)

HSP 1 Score: 237 bits (604), Expect = 2.170e-71
Identity = 114/199 (57.29%), Postives = 142/199 (71.36%), Query Frame = 1 
Query:    1 VISSIHSEHVVKFYGGCFEPKICLVMEYCSNGSLYHLQQRENVDIDWGMCFRLLIETVTGIVALHAENPPIVHRDLKSLNLLVNSENRVKVCDFGLSRYTQGSGDNSTLGKLRGTYAYSAPEVYHGKPYSTKSDVYSIGVIMWELVARVINKSYLRPYKEYKHLRIDFQIIIASAKKGIRPTIPASCPASLRALIVRCW 597
            ++S+I S+HVV FYG   +PK+C+VME C  GSLYH+   E +DI W   FR   E   GI  LH   P IVHRDLKSLNLLVN +  VKVCDFGLSR+  GS +  TL K+RGT+AY APEVY G+ +S +SDVYS+G+I+WELV R IN  Y RP+ E+K+L+ DFQIII +AK+ +RPTIP +CP S   LI  CW
Sbjct:  398 IMSAIRSKHVVHFYGAVLQPKLCMVMENCIRGSLYHVMNDEKLDIGWDKTFRFATEAARGIACLHMWEPMIVHRDLKSLNLLVNDKWEVKVCDFGLSRFNTGS-NLETLVKMRGTFAYCAPEVYFGEQFSARSDVYSMGMILWELVTRCINGRYERPFSEFKNLQHDFQIIIQTAKRNLRPTIPKACPVSFSQLIQDCW 595
[Close]
BLAST of mRNA_M-pyrifera_M_contig97695.22498.1 vs. uniprot
Match: A0A6B2L9F5_9EUKA (Protein kinase domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L9F5_9EUKA)

HSP 1 Score: 217 bits (553), Expect = 1.530e-67
Identity = 104/204 (50.98%), Postives = 139/204 (68.14%), Query Frame = 1 
Query:    1 VISSIHSEHVVKFYGGCFEPKICLVMEYCSNGSLYHLQQRENVDIDWGMCFRLLIETVTGIVALHAENPPIVHRDLKSLNLLVNSENRVKVCDFGLSRYTQGSGD-----NSTLGKLRGTYAYSAPEVYHGKPYSTKSDVYSIGVIMWELVARVINKSYLRPYKEYKHLRIDFQIIIASAKKGIRPTIPASCPASLRALIVRCW 597
            ++S +   ++V FYG   EPK+C+VME C NGSLYH       +I W   F+   E  +GI  LH   P IVHRDLKSLNLL+N +  +KVCDFGLSRY    G+     + TL KLRGTYAY+APE+YH K Y+TKSDV+SIG+I+WE+ + VIN+ + +PY EY  ++ D+QII   A++G RPTIP  CP S+ A++ +CW
Sbjct:   59 IMSQVSDTNIVHFYGATLEPKLCIVMELCPNGSLYHYMVAN--EITWDNFFKWSCEMCSGINVLHRWKPTIVHRDLKSLNLLLNKDLTIKVCDFGLSRYVPPEGEKPQECDQTLQKLRGTYAYTAPEMYHSKIYTTKSDVFSIGIIIWEMSSCVINRQFRKPYSEYSDIKHDYQIIYQVAEQGRRPTIPVDCPKSVAAVMQQCW 260
[Close]
BLAST of mRNA_M-pyrifera_M_contig97695.22498.1 vs. uniprot
Match: UPI00064488DC (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064488DC)

HSP 1 Score: 225 bits (573), Expect = 9.260e-67
Identity = 108/199 (54.27%), Postives = 140/199 (70.35%), Query Frame = 1 
Query:    1 VISSIHSEHVVKFYGGCFEPKICLVMEYCSNGSLYHLQQRENVDIDWGMCFRLLIETVTGIVALHAENPPIVHRDLKSLNLLVNSENRVKVCDFGLSRYTQGSGDNSTLGKLRGTYAYSAPEVYHGKPYSTKSDVYSIGVIMWELVARVINKSYLRPYKEYKHLRIDFQIIIASAKKGIRPTIPASCPASLRALIVRCW 597
            ++S+I S++VV FYG   EP+  +VME+C+ GSLYH+   + +DI W   F+   E V GI  LH  NP IVHRDLKSLNLLVN +  VKVCDFGLSR+  GS +  TL K+RGT A+ APE+Y  + +STK DVYSIG+I+WELV RV++  Y RP+ E+ +L  D+QIII +AKKG+RPT+P  CP     LI  CW
Sbjct:  410 IMSAIRSKYVVHFYGAVVEPRPSMVMEHCAKGSLYHVMNNDRLDIGWEKLFKFATEMVRGIECLHGWNPQIVHRDLKSLNLLVNDKWEVKVCDFGLSRFNTGS-NMETLAKMRGTLAFCAPEIYFNEQFSTKCDVYSIGIILWELVTRVVHSRYERPFSEFSNLHHDYQIIIQTAKKGLRPTMP-DCPPKFAQLIKECW 606
[Close]
BLAST of mRNA_M-pyrifera_M_contig97695.22498.1 vs. uniprot
Match: A0A6B2L552_9EUKA (Protein kinase domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L552_9EUKA)

HSP 1 Score: 215 bits (548), Expect = 2.120e-65
Identity = 102/200 (51.00%), Postives = 137/200 (68.50%), Query Frame = 1 
Query:    1 VISSIHSEHVVKFYGGCFEPKICLVMEYCSNGSLYHLQQRENVDIDWGMCFRLLIETVTGIVALHAENPPIVHRDLKSLNLLVNSENRVKVCDFGLSRYTQGSG-DNSTLGKLRGTYAYSAPEVYHGKPYSTKSDVYSIGVIMWELVARVINKSYLRPYKEYKHLRIDFQIIIASAKKGIRPTIPASCPASLRALIVRCW 597
            ++S + +  +V FYG   EPK  +VME+C NGSLYH   + N ++ W    +  IE   GI +LH   PP+VHRDLK+LNLL++ +  +K+CDFGLSRYTQG   D++TL KLRGTYAY+APE+   K Y+ KSD+YS GVIMWELV R+I   + +PY E+  L+ DFQ+ I ++K   RPTIP  CP  ++ LI RCW
Sbjct:  164 IMSQLKAHEIVHFYGVVLEPKWMIVMEFCPNGSLYHYIIKPNSEVTWERILKWCIELARGINSLHNCKPPLVHRDLKTLNLLLDRDFNIKICDFGLSRYTQGKQCDDATLVKLRGTYAYTAPELNSSKQYTAKSDIYSCGVIMWELVNRLIKGKHSKPYAEFPDLKYDFQVFIQASKNNRRPTIPPECPNKVQELIERCW 363
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97695.22498.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4M8J5_9EUKA2.740e-8766.50Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
SPKA_DICDI2.640e-7761.81Stress-activated protein kinase alpha n=1 Tax=Dict... [more]
F4PJM3_CAVFA2.040e-7659.80Ankyrin repeat-containing protein n=1 Tax=Cavender... [more]
D3B860_POLPP1.930e-7558.29Ankyrin repeat-containing protein n=1 Tax=Polyspho... [more]
A0A8J4PR25_9MYCE1.370e-7460.30Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
A0A152A133_9MYCE1.420e-7358.79Ankyrin repeat-containing protein n=1 Tax=Tieghemo... [more]
F0ZY14_DICPU2.170e-7157.29Uncharacterized protein n=1 Tax=Dictyostelium purp... [more]
A0A6B2L9F5_9EUKA1.530e-6750.98Protein kinase domain-containing protein n=1 Tax=A... [more]
UPI00064488DC9.260e-6754.27hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A6B2L552_9EUKA2.120e-6551.00Protein kinase domain-containing protein n=1 Tax=A... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97695contigM-pyrifera_M_contig97695:54..707 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score256.1
Seed ortholog evalue1.3e-65
Seed eggNOG ortholog44689.DDB0185206
KEGG rclassRC02233
KEGG koko:K00485,ko:K08838,ko:K16288
KEGG ReactionR08266
KEGG Pathwayko00982,ko01120,map00982,map01120
Hectar predicted targeting categoryother localisation
GOsGO:0000278,GO:0000281,GO:0000910,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005938,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006935,GO:0006950,GO:0006970,GO:0006996,GO:0007010,GO:0007049,GO:0007154,GO:0007165,GO:0007275,GO:0008150,GO:0008152,GO:0009605,GO:0009628,GO:0009987,GO:0015629,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0022402,GO:0023052,GO:0030029,GO:0030036,GO:0030863,GO:0032501,GO:0032502,GO:0035556,GO:0036211,GO:0040011,GO:0042221,GO:0042330,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044448,GO:0044464,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051301,GO:0051716,GO:0061640,GO:0065007,GO:0071704,GO:0071840,GO:0071944,GO:0099568,GO:0140096,GO:1901564,GO:1903047
EggNOG free text desc.Ankyrin repeat
EggNOG OGs3X85P@554915,COG0515@1,KOG0192@2759
EC1.14.13.8,2.7.11.1
COG Functional cat.T
Best tax levelAmoebozoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko04131
Exons2
Model size597
Cds size597
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816893.8839028-CDS-M-pyrifera_M_contig97695:53..2991622816893.8839028-CDS-M-pyrifera_M_contig97695:53..299Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97695 54..299 +
1692278240.973702-CDS-M-pyrifera_M_contig97695:53..2991692278240.973702-CDS-M-pyrifera_M_contig97695:53..299Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97695 54..299 +
1622816893.8955328-CDS-M-pyrifera_M_contig97695:356..7071622816893.8955328-CDS-M-pyrifera_M_contig97695:356..707Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97695 357..707 +
1692278240.9870903-CDS-M-pyrifera_M_contig97695:356..7071692278240.9870903-CDS-M-pyrifera_M_contig97695:356..707Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97695 357..707 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97695.22498.1prot_M-pyrifera_M_contig97695.22498.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig97695 54..707 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig97695.22498.1

>prot_M-pyrifera_M_contig97695.22498.1 ID=prot_M-pyrifera_M_contig97695.22498.1|Name=mRNA_M-pyrifera_M_contig97695.22498.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=199bp
VISSIHSEHVVKFYGGCFEPKICLVMEYCSNGSLYHLQQRENVDIDWGMC
FRLLIETVTGIVALHAENPPIVHRDLKSLNLLVNSENRVKVCDFGLSRYT
QGSGDNSTLGKLRGTYAYSAPEVYHGKPYSTKSDVYSIGVIMWELVARVI
NKSYLRPYKEYKHLRIDFQIIIASAKKGIRPTIPASCPASLRALIVRCW
back to top

mRNA from alignment at M-pyrifera_M_contig97695:54..707+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig97695.22498.1 ID=mRNA_M-pyrifera_M_contig97695.22498.1|Name=mRNA_M-pyrifera_M_contig97695.22498.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig97695:54..707+ (Macrocystis pyrifera P11B4 male)
GTAATCAGCTCGATCCACTCGGAGCACGTGGTGAAGTTCTATGGAGGCTG
CTTTGAGCCAAAGATTTGCTTGGTGATGGAGTACTGCTCGAACGGCAGCC
TGTACCACCTGCAACAGCGGGAGAACGTGGACATCGACTGGGGGATGTGC
TTCAGGCTCCTCATCGAGACAGTGACTGGCATCGTTGCCCTCCACGCCGA
GAACCCGCCCATCGTTCATCGGGACTTGAAGAGCCTCAACTTGCTGGTAT
GTCGCTCATCGCACAGACCCCGGCAGAACACAGGGCACTGACAGGTTGTG
CAGGTCAACAGCGAGAACAGGGTAAAGGTGTGCGACTTTGGCCTCTCCCG
CTACACCCAAGGCTCTGGAGACAACTCGACACTGGGGAAGCTGCGTGGCA
CTTATGCCTACAGCGCCCCCGAGGTCTACCACGGCAAGCCATATAGCACC
AAGTCAGATGTGTACAGTATAGGAGTGATCATGTGGGAGCTTGTGGCGAG
GGTCATCAACAAGTCGTACCTGCGGCCTTACAAGGAGTACAAGCACCTGC
GCATCGACTTTCAGATCATCATTGCCTCTGCGAAGAAGGGCATCAGGCCG
ACGATCCCTGCCTCGTGCCCCGCCTCACTGCGAGCGCTCATTGTTCGGTG
TTGG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig97695:54..707+

>mRNA_M-pyrifera_M_contig97695.22498.1 ID=mRNA_M-pyrifera_M_contig97695.22498.1|Name=mRNA_M-pyrifera_M_contig97695.22498.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1194bp|location=Sequence derived from alignment at M-pyrifera_M_contig97695:54..707+ (Macrocystis pyrifera P11B4 male)
GTAATCAGCTCGATCCACTCGGAGCACGTGGTGAAGTTCTATGGAGGCTG
CTTTGAGCCAAAGATTTGCTTGGTGATGGAGTACTGCTCGAACGGCAGCC
TGTACCACCTGCAACAGCGGGAGAACGTGGACATCGACTGGGGGATGTGC
TTCAGGCTCCTCATCGAGACAGTGACTGGCATCGTTGCCCTCCACGCCGA
GAACCCGCCCATCGTTCATCGGGACTTGAAGAGCCTCAACTTGCTGGTAA
TCAGCTCGATCCACTCGGAGCACGTGGTGAAGTTCTATGGAGGCTGCTTT
GAGCCAAAGATTTGCTTGGTGATGGAGTACTGCTCGAACGGCAGCCTGTA
CCACCTGCAACAGCGGGAGAACGTGGACATCGACTGGGGGATGTGCTTCA
GGCTCCTCATCGAGACAGTGACTGGCATCGTTGCCCTCCACGCCGAGAAC
CCGCCCATCGTTCATCGGGACTTGAAGAGCCTCAACTTGCTGGTCAACAG
CGAGAACAGGGTAAAGGTGTGCGACTTTGGCCTCTCCCGCTACACCCAAG
GCTCTGGAGACAACTCGACACTGGGGAAGCTGCGTGGCACTTATGCCTAC
AGCGCCCCCGAGGTCTACCACGGCAAGCCATATAGCACCAAGTCAGATGT
GTACAGTATAGGAGTGATCATGTGGGAGCTTGTGGCGAGGGTCATCAACA
AGTCGTACCTGCGGCCTTACAAGGAGTACAAGCACCTGCGCATCGACTTT
CAGATCATCATTGCCTCTGCGAAGAAGGGCATCAGGCCGACGATCCCTGC
CTCGTGCCCCGCCTCACTGCGAGCGCTCATTGTTCGGTGTTGGGTCAACA
GCGAGAACAGGGTAAAGGTGTGCGACTTTGGCCTCTCCCGCTACACCCAA
GGCTCTGGAGACAACTCGACACTGGGGAAGCTGCGTGGCACTTATGCCTA
CAGCGCCCCCGAGGTCTACCACGGCAAGCCATATAGCACCAAGTCAGATG
TGTACAGTATAGGAGTGATCATGTGGGAGCTTGTGGCGAGGGTCATCAAC
AAGTCGTACCTGCGGCCTTACAAGGAGTACAAGCACCTGCGCATCGACTT
TCAGATCATCATTGCCTCTGCGAAGAAGGGCATCAGGCCGACGATCCCTG
CCTCGTGCCCCGCCTCACTGCGAGCGCTCATTGTTCGGTGTTGG
back to top