mRNA_M-pyrifera_M_contig97693.22497.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig97693.22497.1 vs. uniprot
Match: D2VZJ6_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VZJ6_NAEGR) HSP 1 Score: 83.2 bits (204), Expect = 1.970e-17 Identity = 37/83 (44.58%), Postives = 54/83 (65.06%), Query Frame = 1 Query: 1 FSYLEEEVEEELLCSICMDAFTSPVEHSACGNVFCAECVEGATITACPLCRGDCRGGF---VPVKNRVLLNMLAKVKVRCDDC 240 F Y+E+E++E+L+CSIC+ F P+ H++CGN FCA+C+E T+ CPLC GGF + + NML K+KV+C C Sbjct: 34 FDYVEKEIDEDLICSICLHPFVDPISHNSCGNTFCAKCIENVTV--CPLCN---EGGFKKNCAASAKTIRNMLDKLKVKCGMC 111
BLAST of mRNA_M-pyrifera_M_contig97693.22497.1 vs. uniprot
Match: A0A7G2CKC1_9TRYP (Zinc finger, C3HC4 type (RING finger)/RING-type zinc-finger/zinc-RING finger domain/EF hand/EF-hand domain pair, putative n=1 Tax=Angomonas deanei TaxID=59799 RepID=A0A7G2CKC1_9TRYP) HSP 1 Score: 68.2 bits (165), Expect = 1.260e-11 Identity = 30/76 (39.47%), Postives = 45/76 (59.21%), Query Frame = 1 Query: 16 EEVEEELLCSICMDAFTSPVEHSACGNVFCAECVEGATITACPLCRGDCRGGFVPVKNRVLLNMLAKVKVRCDDCG 243 E V +EL+C +C+D+F PVE CG+++C +C+ G + CP CR P NR ++NM V+V+C CG Sbjct: 7 ENVNDELVCGVCLDSFNDPVEIRRCGHIYCRKCLTG--MKDCPTCREPIESTVAP--NRAIVNMALNVQVKCMKCG 78
BLAST of mRNA_M-pyrifera_M_contig97693.22497.1 vs. uniprot
Match: D2W263_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2W263_NAEGR) HSP 1 Score: 67.8 bits (164), Expect = 2.130e-11 Identity = 34/83 (40.96%), Postives = 52/83 (62.65%), Query Frame = 1 Query: 1 FSYLEEEVEEELLCSICMDAFTSPVEHS--ACGNVFCAECVEGATITACPLCRG-DCRGGFVPVKNRVLLNMLAKVKVRCDDC 240 F Y+E+E++E+L+CSIC+ F P+ H+ ACGN FC +CVE ++ CP+CR D + K + +L K+KV+C C Sbjct: 31 FDYVEKEIDEDLICSICLLPFVDPISHNSDACGNTFCLKCVE--KVSDCPMCREVDFKKNCSSAKT--IAKLLDKLKVKCGMC 109
BLAST of mRNA_M-pyrifera_M_contig97693.22497.1 vs. uniprot
Match: D2VR88_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VR88_NAEGR) HSP 1 Score: 65.9 bits (159), Expect = 9.880e-11 Identity = 30/81 (37.04%), Postives = 46/81 (56.79%), Query Frame = 1 Query: 1 FSYLEEE-VEEELLCSICMDAFTSPVEHSACGNVFCAECVEGATITACPLCRGDCRGGFVPVKNRVLLNMLAKVKVRCDDC 240 + YL+E +E++L+CS+C F P+ HS C N+FC+ CV+ CPLC+G+ R + N L ++KV C C Sbjct: 52 YIYLDENNIEKDLICSLCYHPFIDPIMHSTCENMFCSSCVKKVIGNKCPLCKGENFTSNCSSVPRFVTNKLLQLKVECSMC 132
BLAST of mRNA_M-pyrifera_M_contig97693.22497.1 vs. uniprot
Match: A0A0L0DPL0_THETB (Rac2 protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DPL0_THETB) HSP 1 Score: 62.4 bits (150), Expect = 1.680e-9 Identity = 28/81 (34.57%), Postives = 46/81 (56.79%), Query Frame = 1 Query: 7 YLEEEVEEELLCSICMDAFTSPVEHSACGNVFCAECVEGATI--TACPLCRGDCRGGFVPVKNRVLLNMLAKVKVRCDDCG 243 Y++E++++ELLCSIC F PV C ++FCA C++ CP CRG V +R++ N++ K++ C + G Sbjct: 355 YVDEDIDDELLCSICTLPFLEPVAVPGCEHIFCATCLKDWLFQHANCPACRGTVAASAVAPASRIIRNLVDKLEAHCPEDG 435
BLAST of mRNA_M-pyrifera_M_contig97693.22497.1 vs. uniprot
Match: A0A816BM77_9BILA (Hypothetical protein n=4 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A816BM77_9BILA) HSP 1 Score: 57.8 bits (138), Expect = 6.800e-8 Identity = 30/85 (35.29%), Postives = 46/85 (54.12%), Query Frame = 1 Query: 1 FSYLEE-EVEEELLCSICMDAFTSPVEHSACGNVFCAECVEG--ATITACPLCRGDC-RGGFVPVKNRVLLNMLAKVKVRCDDCG 243 + YL E ++E LLC +C F P+ S C + C +C++ + CP+CR PV R+LL ML ++KV+C +CG Sbjct: 7 YEYLNETSIDELLLCPLCKSPFVDPMS-SPCQHTVCCQCIKKWLKKSSTCPICRKSLVENDLKPVTERILLQMLHRLKVKCTECG 90
BLAST of mRNA_M-pyrifera_M_contig97693.22497.1 vs. uniprot
Match: A0A814Q4S7_9BILA (Hypothetical protein n=3 Tax=Rotaria TaxID=231623 RepID=A0A814Q4S7_9BILA) HSP 1 Score: 56.6 bits (135), Expect = 7.450e-8 Identity = 29/85 (34.12%), Postives = 46/85 (54.12%), Query Frame = 1 Query: 1 FSYLEE-EVEEELLCSICMDAFTSPVEHSACGNVFCAECVEG--ATITACPLCRGDC-RGGFVPVKNRVLLNMLAKVKVRCDDCG 243 + YL E ++E L+C IC P+ S C + C +C++ ++CP+CR PV R+LL ML ++KV+C +CG Sbjct: 7 YEYLNETSIDELLICHICRSPLVDPIS-SPCQHTACCQCIKRWLKNTSSCPVCRKSLVENDLKPVTERILLQMLNRLKVKCTECG 90
BLAST of mRNA_M-pyrifera_M_contig97693.22497.1 vs. uniprot
Match: A0A820GRX8_9BILA (Hypothetical protein n=5 Tax=Rotaria socialis TaxID=392032 RepID=A0A820GRX8_9BILA) HSP 1 Score: 56.6 bits (135), Expect = 1.740e-7 Identity = 29/85 (34.12%), Postives = 46/85 (54.12%), Query Frame = 1 Query: 1 FSYLEE-EVEEELLCSICMDAFTSPVEHSACGNVFCAECVEG--ATITACPLCRGDC-RGGFVPVKNRVLLNMLAKVKVRCDDCG 243 + YL E ++E L+C IC P+ S C + C +C++ ++CP+CR PV R+LL ML ++KV+C +CG Sbjct: 7 YEYLNETSIDELLICHICRSPLVDPIS-SPCQHTACCQCIKRWLKNTSSCPVCRKSLVENDLKPVTERILLQMLNRLKVKCTECG 90
BLAST of mRNA_M-pyrifera_M_contig97693.22497.1 vs. uniprot
Match: A0A817KJ66_9BILA (Hypothetical protein n=3 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817KJ66_9BILA) HSP 1 Score: 56.2 bits (134), Expect = 2.000e-7 Identity = 29/84 (34.52%), Postives = 44/84 (52.38%), Query Frame = 1 Query: 1 FSYLEEE-VEEELLCSICMDAFTSPVEHSACGNVFCAECVEG--ATITACPLCRGDCR-GGFVPVKNRVLLNMLAKVKVRCDDC 240 F Y+ E+ ++EEL C+IC F P S CG+ FC +C+ CP CR +P+ R++LN L ++ V+C C Sbjct: 21 FEYINEDNIDEELKCTICAQPFQMPTTSSKCGHTFCHQCIIEWLNKQNTCPTCRNRMSLQELLPIATRIILNQLDRLLVQCTLC 104
BLAST of mRNA_M-pyrifera_M_contig97693.22497.1 vs. uniprot
Match: A0A815JAF9_9BILA (Hypothetical protein n=6 Tax=Rotaria sordida TaxID=392033 RepID=A0A815JAF9_9BILA) HSP 1 Score: 55.8 bits (133), Expect = 2.630e-7 Identity = 32/95 (33.68%), Postives = 48/95 (50.53%), Query Frame = 1 Query: 1 FSYLEE-EVEEELLCSICMDAFTSPVEHSACGNVFCAECVE--GATITACPLCRGDCR------------GGFVPVKNRVLLNMLAKVKVRCDDC 240 + Y+ E E+++EL C+IC F PV S C + FC EC++ CP+CR R +VP+ R++LN L ++ VRC C Sbjct: 9 YEYINENEIDDELKCTICKQPFEYPVSLSLCHHTFCKECIKIWFYQNQTCPICRQIIRHCYERINQSFEYSLYVPINTRIVLNQLDRLLVRCLLC 103 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97693.22497.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig97693.22497.1 >prot_M-pyrifera_M_contig97693.22497.1 ID=prot_M-pyrifera_M_contig97693.22497.1|Name=mRNA_M-pyrifera_M_contig97693.22497.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=81bp FSYLEEEVEEELLCSICMDAFTSPVEHSACGNVFCAECVEGATITACPLCback to top mRNA from alignment at M-pyrifera_M_contig97693:463..705+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig97693.22497.1 ID=mRNA_M-pyrifera_M_contig97693.22497.1|Name=mRNA_M-pyrifera_M_contig97693.22497.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=243bp|location=Sequence derived from alignment at M-pyrifera_M_contig97693:463..705+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig97693:463..705+ >mRNA_M-pyrifera_M_contig97693.22497.1 ID=mRNA_M-pyrifera_M_contig97693.22497.1|Name=mRNA_M-pyrifera_M_contig97693.22497.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=486bp|location=Sequence derived from alignment at M-pyrifera_M_contig97693:463..705+ (Macrocystis pyrifera P11B4 male)back to top |