mRNA_M-pyrifera_M_contig97691.22495.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig97691.22495.1
Unique NamemRNA_M-pyrifera_M_contig97691.22495.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig97691.22495.1 vs. uniprot
Match: Q4E602_TRYCC (6-phosphofructo-2-kinase/fructose-2, 6-biphosphatase, putative n=8 Tax=Trypanosoma cruzi TaxID=5693 RepID=Q4E602_TRYCC)

HSP 1 Score: 56.2 bits (134), Expect = 1.270e-6
Identity = 34/81 (41.98%), Postives = 49/81 (60.49%), Query Frame = 1
Query:   94 QMIPILSKAAAKRMFEATREGKSSVLQTLIEEYSLDVNQKDEHQQTPLHVAMECGNEGVVQILISCGADDHAKNGDGLTPI 336
            Q+  I  + +A+ +F   R   +S LQ L+E    DVN++D +  TPLHVA   GNE +V++LIS GAD  A +  G TP+
Sbjct:  259 QLKEIRKELSAQNIFSLVRASNASQLQYLLENKICDVNKRDYNGCTPLHVAALEGNEVIVRVLISFGADLMAVDNTGRTPL 339          
BLAST of mRNA_M-pyrifera_M_contig97691.22495.1 vs. uniprot
Match: Q582Y3_TRYB2 (6-phosphofructo-2-kinase/fructose-2, 6-biphosphatase, putative n=3 Tax=Trypanosoma brucei TaxID=5691 RepID=Q582Y3_TRYB2)

HSP 1 Score: 55.5 bits (132), Expect = 2.360e-6
Identity = 33/68 (48.53%), Postives = 42/68 (61.76%), Query Frame = 1
Query:  133 MFEATREGKSSVLQTLIEEYSLDVNQKDEHQQTPLHVAMECGNEGVVQILISCGADDHAKNGDGLTPI 336
            +F   R   SS L  L+E   +DVNQ+D +  TPLHVA   GNE VV++LIS GAD  A +  G TP+
Sbjct:  287 IFALVRACNSSELHYLLERKLVDVNQRDYNGCTPLHVAALGGNESVVRVLISFGADITAIDNTGRTPL 354          
BLAST of mRNA_M-pyrifera_M_contig97691.22495.1 vs. uniprot
Match: UPI0004F46E9F (putative 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase n=1 Tax=Trypanosoma grayi TaxID=71804 RepID=UPI0004F46E9F)

HSP 1 Score: 53.9 bits (128), Expect = 8.160e-6
Identity = 36/112 (32.14%), Postives = 60/112 (53.57%), Query Frame = 1
Query:    1 AEHLLEAGADLLVSDSKGRSPLAIAKATKHSQMIPILSKAAAKRMFEATREGKSSVLQTLIEEYSLDVNQKDEHQQTPLHVAMECGNEGVVQILISCGADDHAKNGDGLTPI 336
            A  +LE   + L+++ + R      K +   Q+  +  + +A  +F   R   +S +  L+E    DVN++D +  TPLHVA   GN+ +V++LIS GAD  A +  G TP+
Sbjct:  240 ASAVLEHNRNTLIAELERR------KKSLQRQLAKMRKEVSANNIFALVRASNASQIMHLLENKLCDVNKRDYNGCTPLHVAALEGNQAIVRVLISFGADIMATDNIGRTPL 345          
BLAST of mRNA_M-pyrifera_M_contig97691.22495.1 vs. uniprot
Match: A0A1V9ZMX1_9STRA (Protein kinase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZMX1_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 1.070e-5
Identity = 28/71 (39.44%), Postives = 45/71 (63.38%), Query Frame = 1
Query:  145 TREGKSSVLQTLIEEYSLDVNQKDEHQQTPLHVAMECGNEGVVQILISCGADDHAKNGDGLTPIALAESLG 357
            T +  ++ + +++  +  +V+  D    T LHVA++ GNE VVQ+L+  GAD   +N D LTP+AL+E LG
Sbjct:   10 TADVNAATVVSILLAHHANVDAVDGEGNTSLHVAVQHGNESVVQLLVDAGADLGIENQDNLTPLALSEKLG 80          
BLAST of mRNA_M-pyrifera_M_contig97691.22495.1 vs. uniprot
Match: A0A1X0P8W5_9TRYP (Putative 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase n=1 Tax=Trypanosoma theileri TaxID=67003 RepID=A0A1X0P8W5_9TRYP)

HSP 1 Score: 53.5 bits (127), Expect = 1.110e-5
Identity = 29/68 (42.65%), Postives = 43/68 (63.24%), Query Frame = 1
Query:  133 MFEATREGKSSVLQTLIEEYSLDVNQKDEHQQTPLHVAMECGNEGVVQILISCGADDHAKNGDGLTPI 336
            +F   R   +S LQ L+E+   +VN++D +  TPLHVA   GNE +V++L+S GAD  A +  G TP+
Sbjct:  269 IFSLVRASNASQLQYLLEKKLCNVNERDYNGGTPLHVAAFEGNEAIVRVLVSFGADIMAMDNMGRTPL 336          
BLAST of mRNA_M-pyrifera_M_contig97691.22495.1 vs. uniprot
Match: A0A061J4M2_TRYRA (6-phosphofructo-2-kinase/fructose-2, 6-biphosphatase n=1 Tax=Trypanosoma rangeli SC58 TaxID=429131 RepID=A0A061J4M2_TRYRA)

HSP 1 Score: 53.5 bits (127), Expect = 1.110e-5
Identity = 30/68 (44.12%), Postives = 42/68 (61.76%), Query Frame = 1
Query:  133 MFEATREGKSSVLQTLIEEYSLDVNQKDEHQQTPLHVAMECGNEGVVQILISCGADDHAKNGDGLTPI 336
            +F   R  K+S LQ L++    DVN++D +  TPLHVA   GNE +V++LIS GAD    +  G TP+
Sbjct:  286 IFSVVRASKASQLQYLLDRKLCDVNKRDYNGCTPLHVAALEGNEVIVRLLISFGADIMVMDNTGRTPL 353          
BLAST of mRNA_M-pyrifera_M_contig97691.22495.1 vs. uniprot
Match: V5GG81_ANOGL (Potassium channel AKT6 (Fragment) n=1 Tax=Anoplophora glabripennis TaxID=217634 RepID=V5GG81_ANOGL)

HSP 1 Score: 51.2 bits (121), Expect = 1.380e-5
Identity = 43/119 (36.13%), Postives = 61/119 (51.26%), Query Frame = 1
Query:    1 AEHLLEAGADLLVSDSKGRSPLAIAKATKHSQMIPILSKAAAKRMFEATR---EGKS-SVLQTLIEEYSLDVNQKDEHQQTPLHVAMECGNEGVVQILISCGADDHAKNGDGLTPIALA 345
            A  LL+ G DL V D  G +PL +A A  H  +I  L K A    F A     EG+  +V+++L+     DVN +D + +TPLH A   G   +V+ L   GAD   ++ D  T + LA
Sbjct:    1 ARFLLKQGDDLYVGDDDGSTPLHLAAANGHLDIINCLLKLA--EDFYAANLVMEGQLLTVMESLVRACG-DVNLQDSNGRTPLHFAASKGRLDIVKFLHEMGADSRIRDKDDNTALQLA 116          
BLAST of mRNA_M-pyrifera_M_contig97691.22495.1 vs. uniprot
Match: J7S5X6_9APHY (ACB domain-containing protein n=1 Tax=Fibroporia radiculosa TaxID=599839 RepID=J7S5X6_9APHY)

HSP 1 Score: 52.8 bits (125), Expect = 1.900e-5
Identity = 26/54 (48.15%), Postives = 35/54 (64.81%), Query Frame = 1
Query:  196 LDVNQKDEHQQTPLHVAMECGNEGVVQILISCGADDHAKNGDGLTPIALAESLG 357
            +D+N  DE+  TPLH+A + GN GVV+ L+  GAD H K+ D  T + LAE  G
Sbjct:  419 IDINALDENGYTPLHLACDRGNLGVVEFLLKRGADVHLKDADNTTALELAEVAG 472          
BLAST of mRNA_M-pyrifera_M_contig97691.22495.1 vs. uniprot
Match: A0A422QAM3_9TRYP (Putative 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase n=1 Tax=Trypanosoma conorhini TaxID=83891 RepID=A0A422QAM3_9TRYP)

HSP 1 Score: 52.4 bits (124), Expect = 2.800e-5
Identity = 29/75 (38.67%), Postives = 45/75 (60.00%), Query Frame = 1
Query:   76 KATKHSQMIPILSKAAAKRMFEATREGKSSVLQTLIEEYSLDVNQKDEHQQTPLHVAMECGNEGVVQILISCGAD 300
            K + H Q+  +  + + + +F   R   +S LQ L+E    D+N++D +  TPLHVA   GNE +V++LIS GAD
Sbjct:  262 KLSLHRQLEEMRKELSGQNIFSLVRASNASQLQYLLENKLCDLNKRDYNGCTPLHVAALEGNEAIVRVLISFGAD 336          
BLAST of mRNA_M-pyrifera_M_contig97691.22495.1 vs. uniprot
Match: E9ACM5_LEIMA (Putative 6-phosphofructo-2-kinase/fructose-2,6-bipho sphatase n=2 Tax=Leishmania TaxID=38568 RepID=E9ACM5_LEIMA)

HSP 1 Score: 52.4 bits (124), Expect = 2.930e-5
Identity = 28/71 (39.44%), Postives = 44/71 (61.97%), Query Frame = 1
Query:   88 HSQMIPILSKAAAKRMFEATREGKSSVLQTLIEEYSLDVNQKDEHQQTPLHVAMECGNEGVVQILISCGAD 300
            H Q+  +  +A A+ +F   R   +S LQ L++E   +VN +D +  TPLHVA   GN+ +V++L+S GAD
Sbjct:  888 HKQLELLQKEATARNIFALVRASNASQLQYLLQEGLCNVNDRDYNGCTPLHVAAGEGNQAIVRVLLSFGAD 958          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97691.22495.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
Q4E602_TRYCC1.270e-641.986-phosphofructo-2-kinase/fructose-2, 6-biphosphata... [more]
Q582Y3_TRYB22.360e-648.536-phosphofructo-2-kinase/fructose-2, 6-biphosphata... [more]
UPI0004F46E9F8.160e-632.14putative 6-phosphofructo-2-kinase/fructose-2,6-bip... [more]
A0A1V9ZMX1_9STRA1.070e-539.44Protein kinase n=1 Tax=Achlya hypogyna TaxID=12027... [more]
A0A1X0P8W5_9TRYP1.110e-542.65Putative 6-phosphofructo-2-kinase/fructose-2,6-bip... [more]
A0A061J4M2_TRYRA1.110e-544.126-phosphofructo-2-kinase/fructose-2, 6-biphosphata... [more]
V5GG81_ANOGL1.380e-536.13Potassium channel AKT6 (Fragment) n=1 Tax=Anoploph... [more]
J7S5X6_9APHY1.900e-548.15ACB domain-containing protein n=1 Tax=Fibroporia r... [more]
A0A422QAM3_9TRYP2.800e-538.67Putative 6-phosphofructo-2-kinase/fructose-2,6-bip... [more]
E9ACM5_LEIMA2.930e-539.44Putative 6-phosphofructo-2-kinase/fructose-2,6-bip... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97691contigM-pyrifera_M_contig97691:84..464 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score61.2
Seed ortholog evalue3.9e-07
Seed eggNOG ortholog400682.PAC_15717261
Preferred nameANKRD13C
KEGG koko:K21437
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006621,GO:0008104,GO:0008150,GO:0009889,GO:0009987,GO:0010556,GO:0010869,GO:0010941,GO:0012505,GO:0019222,GO:0031323,GO:0032507,GO:0033036,GO:0033365,GO:0034613,GO:0035437,GO:0042981,GO:0043067,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045185,GO:0048471,GO:0050789,GO:0050794,GO:0051179,GO:0051235,GO:0051641,GO:0051651,GO:0060255,GO:0065007,GO:0065008,GO:0070727,GO:0070972,GO:0072595,GO:2000209
EggNOG free text desc.protein retention in ER lumen
EggNOG OGsKOG0522@1,KOG0522@2759
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-15_001350.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons1
Model size381
Cds size381
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816893.771789-CDS-M-pyrifera_M_contig97691:83..4641622816893.771789-CDS-M-pyrifera_M_contig97691:83..464Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97691 84..464 +
1692278240.921517-CDS-M-pyrifera_M_contig97691:83..4641692278240.921517-CDS-M-pyrifera_M_contig97691:83..464Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97691 84..464 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97691.22495.1prot_M-pyrifera_M_contig97691.22495.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig97691 84..464 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig97691.22495.1

>prot_M-pyrifera_M_contig97691.22495.1 ID=prot_M-pyrifera_M_contig97691.22495.1|Name=mRNA_M-pyrifera_M_contig97691.22495.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=127bp
AEHLLEAGADLLVSDSKGRSPLAIAKATKHSQMIPILSKAAAKRMFEATR
EGKSSVLQTLIEEYSLDVNQKDEHQQTPLHVAMECGNEGVVQILISCGAD
DHAKNGDGLTPIALAESLGKRAAISGL
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mRNA from alignment at M-pyrifera_M_contig97691:84..464+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig97691.22495.1 ID=mRNA_M-pyrifera_M_contig97691.22495.1|Name=mRNA_M-pyrifera_M_contig97691.22495.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=381bp|location=Sequence derived from alignment at M-pyrifera_M_contig97691:84..464+ (Macrocystis pyrifera P11B4 male)
GCAGAGCACTTGCTCGAGGCAGGCGCAGATCTCCTGGTGTCGGACAGCAA GGGCAGAAGTCCGCTGGCGATTGCCAAGGCGACGAAACACAGCCAAATGA TCCCCATCCTCTCCAAGGCTGCGGCAAAGCGGATGTTCGAAGCGACACGA GAGGGAAAGTCCTCTGTGCTGCAGACGCTGATCGAGGAGTACAGCCTGGA CGTGAACCAGAAGGACGAGCACCAGCAGACGCCCCTGCACGTGGCCATGG AGTGCGGCAACGAGGGCGTCGTGCAGATCCTCATCTCGTGCGGCGCAGAC GACCATGCGAAGAACGGCGACGGCCTCACGCCCATTGCCCTGGCAGAGAG CCTGGGCAAGAGGGCGGCGATCTCCGGCCTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig97691:84..464+

>mRNA_M-pyrifera_M_contig97691.22495.1 ID=mRNA_M-pyrifera_M_contig97691.22495.1|Name=mRNA_M-pyrifera_M_contig97691.22495.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=762bp|location=Sequence derived from alignment at M-pyrifera_M_contig97691:84..464+ (Macrocystis pyrifera P11B4 male)
GCAGAGCACTTGCTCGAGGCAGGCGCAGATCTCCTGGTGTCGGACAGCAA
GGGCAGAAGTCCGCTGGCGATTGCCAAGGCGACGAAACACAGCCAAATGA
TCCCCATCCTCTCCAAGGCTGCGGCAAAGCGGATGTTCGAAGCGACACGA
GAGGGAAAGTCCTCTGTGCTGCAGACGCTGATCGAGGAGTACAGCCTGGA
CGTGAACCAGAAGGACGAGCACCAGCAGACGCCCCTGCACGTGGCCATGG
AGTGCGGCAACGAGGGCGTCGTGCAGATCCTCATCTCGTGCGGCGCAGAC
GACCATGCGAAGAACGGCGACGGCCTCACGCCCATTGCCCTGGCAGAGAG
CCTGGGCAAGAGGGCGGCGATCTCCGGCCTCGCAGAGCACTTGCTCGAGG
CAGGCGCAGATCTCCTGGTGTCGGACAGCAAGGGCAGAAGTCCGCTGGCG
ATTGCCAAGGCGACGAAACACAGCCAAATGATCCCCATCCTCTCCAAGGC
TGCGGCAAAGCGGATGTTCGAAGCGACACGAGAGGGAAAGTCCTCTGTGC
TGCAGACGCTGATCGAGGAGTACAGCCTGGACGTGAACCAGAAGGACGAG
CACCAGCAGACGCCCCTGCACGTGGCCATGGAGTGCGGCAACGAGGGCGT
CGTGCAGATCCTCATCTCGTGCGGCGCAGACGACCATGCGAAGAACGGCG
ACGGCCTCACGCCCATTGCCCTGGCAGAGAGCCTGGGCAAGAGGGCGGCG
ATCTCCGGCCTC
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