mRNA_M-pyrifera_M_contig97637.22491.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig97637.22491.1
Unique NamemRNA_M-pyrifera_M_contig97637.22491.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig97637.22491.1 vs. uniprot
Match: A0A7X6AP19_9ACTN (Hydantoinase B/oxoprolinase family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6AP19_9ACTN)

HSP 1 Score: 426 bits (1094), Expect = 7.070e-147
Identity = 207/234 (88.46%), Postives = 222/234 (94.87%), Query Frame = 1
Query:    1 TLAVTLTVDDDGMHADFAGTSPTSAHGINVPLTYAQAYFTYGMLVALAPELPNNFASLEPFTVSAPPGVILNAEHPEPVAVRHVIGHFVTDLCLGAIAQALPDVVPAEGAGALWNFQASARSASSDDPKPPVEILMFNSGGTGARPLLDGLSATAFPSGVRTMSVEATEQVGPIVVWRKELRPDSGGAGRQRGGLGQVIEVGPSEGYQFEFSAMFDRVANPARGRQGGEPGAPG 702
            TLAVTLTVDDDGMHADF GTSPTS +G+NVPLTYAQAYFTYGMLVALAPELPNNFASL PFTVSAPPGVILNA HP+PVAVRHVIGHFVTDLCLGAIA+ALPDV+PAEG+GALWNFQASARSAS   P PPVE+LMFNSGGTGARP +DGL+ATAFPSGVRTMS EATEQVGPI++WRKE+RPDSGGAGRQRGGLGQ+IEVGP++GY FEFSAMFDRVANPARGRQGGE GAPG
Sbjct:  152 TLAVTLTVDDDGMHADFTGTSPTSRYGVNVPLTYAQAYFTYGMLVALAPELPNNFASLAPFTVSAPPGVILNARHPDPVAVRHVIGHFVTDLCLGAIARALPDVIPAEGSGALWNFQASARSASPAAPLPPVELLMFNSGGTGARPRVDGLTATAFPSGVRTMSAEATEQVGPIIIWRKEIRPDSGGAGRQRGGLGQIIEVGPADGYLFEFSAMFDRVANPARGRQGGEDGAPG 385          
BLAST of mRNA_M-pyrifera_M_contig97637.22491.1 vs. uniprot
Match: A0A7K1Z908_9ACTN (Hydantoinase B/oxoprolinase family protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z908_9ACTN)

HSP 1 Score: 411 bits (1057), Expect = 6.830e-140
Identity = 202/235 (85.96%), Postives = 217/235 (92.34%), Query Frame = 1
Query:    1 TLAVTLTVDDDGMHADFAGTSPTSAHGINVPLTYAQAYFTYGMLVALAPELPNNFASLEPFTVSAPPGVILNAEHPEPVAVRHVIGHFVTDLCLGAIAQALPDVVPAEGAGALWNFQASARSASSDDPKPPVEILMFNSGGTGARPLLDGLSATAFPSGVRTMSVEATEQVGPIVVWRKELRPDSGGAGRQRGGLGQVIEVGPSEGYQFEFSAMFDRVANPARGRQGGEPGAPGA 705
            TL V++TV  DGMHADF GTSP S  G+NVPLTYAQAYFTYGMLVALAPELPNNFASLEPFTVSAPPGVILNA+HP+PVAVRHVIGHFVTDLCLGAIA ALPD +PAEG+GALWNFQASARSA  DDPKPPVE+LMFNSGGTGARP LDGL+ATAFPSGVRTMSVEATEQVGPI++WRKE+R DSGGAGRQRGGLGQ+IEVGP++GY FEFSAMFDRVANPARGR GG  GA GA
Sbjct:  248 TLCVSVTVTADGMHADFTGTSPLSKFGVNVPLTYAQAYFTYGMLVALAPELPNNFASLEPFTVSAPPGVILNAQHPDPVAVRHVIGHFVTDLCLGAIAAALPDRIPAEGSGALWNFQASARSADVDDPKPPVELLMFNSGGTGARPGLDGLTATAFPSGVRTMSVEATEQVGPIIIWRKEIRNDSGGAGRQRGGLGQIIEVGPTDGYLFEFSAMFDRVANPARGRHGGSDGAGGA 482          
BLAST of mRNA_M-pyrifera_M_contig97637.22491.1 vs. uniprot
Match: A0A2D7RWS9_9ACTN (Hydantoinase_B domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D7RWS9_9ACTN)

HSP 1 Score: 399 bits (1025), Expect = 2.080e-137
Identity = 193/234 (82.48%), Postives = 213/234 (91.03%), Query Frame = 1
Query:    1 TLAVTLTVDDDGMHADFAGTSPTSAHGINVPLTYAQAYFTYGMLVALAPELPNNFASLEPFTVSAPPGVILNAEHPEPVAVRHVIGHFVTDLCLGAIAQALPDVVPAEGAGALWNFQASARSASSDDPKPPVEILMFNSGGTGARPLLDGLSATAFPSGVRTMSVEATEQVGPIVVWRKELRPDSGGAGRQRGGLGQVIEVGPSEGYQFEFSAMFDRVANPARGRQGGEPGAPG 702
            TLAVTLTV DDGMHADF GTSP S +GINVPL YA+AYFTY MLVALAPELPNNFASL PFTVSAP GVILNAE P+PV+VRHV+GHFVTDL LGAIA ALP++VPAEGAGALWNFQASAR AS DDPKPP+E+LMFNSGG+GARP LDGL+ATAFPSGVRTMS EATEQVGPI++WRKE+R +SGG GRQRGG+GQ++EVGP++GYQFEFSAMFDRV NPARGR GGE G PG
Sbjct:   83 TLAVTLTVTDDGMHADFTGTSPISRYGINVPLGYAEAYFTYAMLVALAPELPNNFASLAPFTVSAPKGVILNAEPPDPVSVRHVVGHFVTDLTLGAIAHALPEIVPAEGAGALWNFQASARQASPDDPKPPIELLMFNSGGSGARPSLDGLTATAFPSGVRTMSAEATEQVGPIIIWRKEIRENSGGPGRQRGGMGQILEVGPTDGYQFEFSAMFDRVTNPARGRNGGEDGEPG 316          
BLAST of mRNA_M-pyrifera_M_contig97637.22491.1 vs. uniprot
Match: A0A358A5P4_9ACTN (5-oxoprolinase n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A5P4_9ACTN)

HSP 1 Score: 404 bits (1038), Expect = 5.830e-137
Identity = 196/234 (83.76%), Postives = 215/234 (91.88%), Query Frame = 1
Query:    1 TLAVTLTVDDDGMHADFAGTSPTSAHGINVPLTYAQAYFTYGMLVALAPELPNNFASLEPFTVSAPPGVILNAEHPEPVAVRHVIGHFVTDLCLGAIAQALPDVVPAEGAGALWNFQASARSASSDDPKPPVEILMFNSGGTGARPLLDGLSATAFPSGVRTMSVEATEQVGPIVVWRKELRPDSGGAGRQRGGLGQVIEVGPSEGYQFEFSAMFDRVANPARGRQGGEPGAPG 702
            TLAVTLTV DDGMHADF GTSP S +GINVPL YA+AYFTY MLV LAPELPNNFASL PFTVSAP GVILNAEHP+PV+VRHVIGHFVTDL LGAIA ALP+VVPAEGAGALWNFQASAR AS+DDP+PPVE+LMFNSGG+GARP LDGL+ATAFPSGVRTMS EATEQ+GPIV+WRKE+R +SGGAGRQRGG+GQ++EVGP++GYQFEFSAMFDRV NPARGR GGE G PG
Sbjct:  253 TLAVTLTVTDDGMHADFTGTSPISRYGINVPLGYAEAYFTYAMLVTLAPELPNNFASLAPFTVSAPKGVILNAEHPDPVSVRHVIGHFVTDLTLGAIAHALPEVVPAEGAGALWNFQASARQASADDPRPPVELLMFNSGGSGARPSLDGLTATAFPSGVRTMSAEATEQIGPIVIWRKEIRENSGGAGRQRGGMGQILEVGPTDGYQFEFSAMFDRVTNPARGRNGGEDGEPG 486          
BLAST of mRNA_M-pyrifera_M_contig97637.22491.1 vs. uniprot
Match: A0A520Y2N2_9ACTN (Hydantoinase B/oxoprolinase family protein n=3 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520Y2N2_9ACTN)

HSP 1 Score: 389 bits (1000), Expect = 3.270e-131
Identity = 189/235 (80.43%), Postives = 210/235 (89.36%), Query Frame = 1
Query:    1 TLAVTLTVDDDGMHADFAGTSPTSAHGINVPLTYAQAYFTYGMLVALAPELPNNFASLEPFTVSAPPGVILNAEHPEPVAVRHVIGHFVTDLCLGAIAQALPDVVPAEGAGALWNFQASARSASSDDPKPPVEILMFNSGGTGARPLLDGLSATAFPSGVRTMSVEATEQVGPIVVWRKELRPDSGGAGRQRGGLGQVIEVGPSEGYQFEFSAMFDRVANPARGRQGGEPGAPGA 705
            TLAV +TV DDGMHADF GTS  S  G+NVPL YA+AYFTYGMLVALAPELPNN+ASL PFTVSAPPGVILNA+ P+PVAVRHV GHFVTDLCLGA+AQALP+V+PAEGAGALWNFQASARSA  +   PP+E+LMFNSGGTGARP LDGL+ATAFPSGVRTMS EATEQVGPI++WRKE+R +SGG G+QRGGLGQVIE+GP++GY FEF AMFDRV NPARGRQGG  GAPGA
Sbjct:  253 TLAVNVTVSDDGMHADFTGTSSLSPFGVNVPLRYAEAYFTYGMLVALAPELPNNYASLLPFTVSAPPGVILNAQDPDPVAVRHVFGHFVTDLCLGAVAQALPEVIPAEGAGALWNFQASARSADPETLLPPIEMLMFNSGGTGARPTLDGLTATAFPSGVRTMSAEATEQVGPIIIWRKEIRENSGGEGKQRGGLGQVIEIGPTDGYLFEFGAMFDRVENPARGRQGGGDGAPGA 487          
BLAST of mRNA_M-pyrifera_M_contig97637.22491.1 vs. uniprot
Match: UPI00034CB552 (hydantoinase B/oxoprolinase family protein n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI00034CB552)

HSP 1 Score: 390 bits (1001), Expect = 3.340e-131
Identity = 189/235 (80.43%), Postives = 212/235 (90.21%), Query Frame = 1
Query:    1 TLAVTLTVDDDGMHADFAGTSPTSAHGINVPLTYAQAYFTYGMLVALAPELPNNFASLEPFTVSAPPGVILNAEHPEPVAVRHVIGHFVTDLCLGAIAQALPDVVPAEGAGALWNFQASARSASSDDPKPPVEILMFNSGGTGARPLLDGLSATAFPSGVRTMSVEATEQVGPIVVWRKELRPDSGGAGRQRGGLGQVIEVGPSEGYQFEFSAMFDRVANPARGRQGGEPGAPGA 705
            TLAV +TV +DGMHADF GTSP    GINVPL YA AYFTYGMLVALAPELPNN+ASL  FTVSAP GVILNA+HP+PVAVRHV+GHFVTDLCLGA+AQA+P+ +PAEG+GALWNFQASARS+   DP+PPVEILMFNSGGTGARP LDGL++TAFPSGVRTMSVEATEQVGPIV+WRKE+RPDSGG G QRGGLGQVIE+GP+EGY+F+FSAMFDR+ +PARGR GG  GAPGA
Sbjct:  265 TLAVEITVTEDGMHADFTGTSPVCPLGINVPLGYAHAYFTYGMLVALAPELPNNYASLATFTVSAPDGVILNAKHPDPVAVRHVLGHFVTDLCLGAVAQAIPERIPAEGSGALWNFQASARSSDPMDPRPPVEILMFNSGGTGARPTLDGLTSTAFPSGVRTMSVEATEQVGPIVIWRKEIRPDSGGVGAQRGGLGQVIELGPTEGYRFDFSAMFDRIDHPARGRAGGGDGAPGA 499          
BLAST of mRNA_M-pyrifera_M_contig97637.22491.1 vs. uniprot
Match: A0A7K1YWF1_9ACTN (Hydantoinase B/oxoprolinase family protein n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1YWF1_9ACTN)

HSP 1 Score: 389 bits (1000), Expect = 3.480e-131
Identity = 193/235 (82.13%), Postives = 207/235 (88.09%), Query Frame = 1
Query:    1 TLAVTLTVDDDGMHADFAGTSPTSAHGINVPLTYAQAYFTYGMLVALAPELPNNFASLEPFTVSAPPGVILNAEHPEPVAVRHVIGHFVTDLCLGAIAQALPDVVPAEGAGALWNFQASARSASSDDPKPPVEILMFNSGGTGARPLLDGLSATAFPSGVRTMSVEATEQVGPIVVWRKELRPDSGGAGRQRGGLGQVIEVGPSEGYQFEFSAMFDRVANPARGRQGGEPGAPGA 705
            TL   +TV DDGMHAD  GTSP S  GINVPLTYAQAYFTYGMLVALAPELPNN+ASL PFTVSAPPG ILNA  P PVA+RHVIGHFVTDLCLGAIA ALPDVVPAEG+GALWNFQASARSA   DP+PPVE+LMFNSGG+GARP LDGL+ATAFPSGVRTMSVEATEQVGPI+VWRKE+RP SGGAGR RGGLGQ+IE+ P++GY FEFSAMFDRV NPARGR GG  GA GA
Sbjct:  255 TLVAAVTVTDDGMHADLTGTSPVSPFGINVPLTYAQAYFTYGMLVALAPELPNNYASLLPFTVSAPPGAILNAVEPNPVAIRHVIGHFVTDLCLGAIAHALPDVVPAEGSGALWNFQASARSADPGDPRPPVEMLMFNSGGSGARPGLDGLTATAFPSGVRTMSVEATEQVGPIIVWRKEIRPGSGGAGRFRGGLGQIIEIAPADGYLFEFSAMFDRVDNPARGRAGGLDGAAGA 489          
BLAST of mRNA_M-pyrifera_M_contig97637.22491.1 vs. uniprot
Match: A0A351XDQ8_9ACTN (5-oxoprolinase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351XDQ8_9ACTN)

HSP 1 Score: 380 bits (975), Expect = 1.090e-130
Identity = 190/234 (81.20%), Postives = 201/234 (85.90%), Query Frame = 1
Query:    1 TLAVTLTVDDDGMHADFAGTSPTSAHGINVPLTYAQAYFTYGMLVALAPELPNNFASLEPFTVSAPPGVILNAEHPEPVAVRHVIGHFVTDLCLGAIAQALPDVVPAEGAGALWNFQASARSASSDDPKPPVEILMFNSGGTGARPLLDGLSATAFPSGVRTMSVEATEQVGPIVVWRKELRPDSGGAGRQRGGLGQVIEVGPSEGYQFEFSAMFDRVANPARGRQGGEPGAPG 702
            TLAVTLTV DDG HADFAGTS T AHG+NVPLTYA AYF+Y MLVALAPE+P+N ASL  FTVSAP G ILNA+HPEPVAVRHVIGHFVTDLCLGAIA ALPD+VPAEGAGALWNFQ SAR+       PP EILMFNSGGTGARP LDGLSATAFPSGVRTM  EATEQ GPIVVWRKELRPDSGG GR+RGGLGQVIE+GP+EGY+F FS MFDRV NPARGR GG  GA G
Sbjct:   24 TLAVTLTVTDDGAHADFAGTSATCAHGVNVPLTYAHAYFSYAMLVALAPEMPSNHASLAVFTVSAPEGCILNAKHPEPVAVRHVIGHFVTDLCLGAIADALPDIVPAEGAGALWNFQVSARATDPTSGLPPREILMFNSGGTGARPTLDGLSATAFPSGVRTMPAEATEQAGPIVVWRKELRPDSGGPGRRRGGLGQVIELGPTEGYEFAFSCMFDRVQNPARGRHGGGDGATG 257          
BLAST of mRNA_M-pyrifera_M_contig97637.22491.1 vs. uniprot
Match: A0A6B1ECP6_9ACTN (Hydantoinase B/oxoprolinase family protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1ECP6_9ACTN)

HSP 1 Score: 387 bits (995), Expect = 1.410e-130
Identity = 192/234 (82.05%), Postives = 209/234 (89.32%), Query Frame = 1
Query:    1 TLAVTLTVDDDGMHADFAGTSPTSAHGINVPLTYAQAYFTYGMLVALAPELPNNFASLEPFTVSAPPGVILNAEHPEPVAVRHVIGHFVTDLCLGAIAQALPDVVPAEGAGALWNFQASARSASSDDPKPPVEILMFNSGGTGARPLLDGLSATAFPSGVRTMSVEATEQVGPIVVWRKELRPDSGGAGRQRGGLGQVIEVGPSEGYQFEFSAMFDRVANPARGRQGGEPGAPG 702
            TL+  +TV   GMHADF GTSP S+ GINVP+TYAQAYFTYGMLVALAPELPNNFASLEPFTVS+P G ILNA  P+PVAVRHVIGHFVTDLC+GAIA+ALP+VVPAEG+GALWNFQASARSA   DP+PPVE+LMFNSGGTGARP LDGL+ATAFPSGVRTMSVEATEQVGP+VVWRKE+R DSGG GR RGGLGQVIE+GP+EGY FEFSAMFDRV NPARGR GG  GA G
Sbjct:  244 TLSAAVTVTGTGMHADFTGTSPVSSFGINVPITYAQAYFTYGMLVALAPELPNNFASLEPFTVSSPQGSILNAVEPDPVAVRHVIGHFVTDLCMGAIAEALPEVVPAEGSGALWNFQASARSADPTDPRPPVEMLMFNSGGTGARPGLDGLTATAFPSGVRTMSVEATEQVGPVVVWRKEIRDDSGGEGRFRGGLGQVIEIGPAEGYLFEFSAMFDRVDNPARGRAGGADGARG 477          
BLAST of mRNA_M-pyrifera_M_contig97637.22491.1 vs. uniprot
Match: A0A382B7X3_9ZZZZ (Hydantoinase_B domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382B7X3_9ZZZZ)

HSP 1 Score: 381 bits (978), Expect = 1.180e-129
Identity = 189/233 (81.12%), Postives = 201/233 (86.27%), Query Frame = 1
Query:    4 LAVTLTVDDDGMHADFAGTSPTSAHGINVPLTYAQAYFTYGMLVALAPELPNNFASLEPFTVSAPPGVILNAEHPEPVAVRHVIGHFVTDLCLGAIAQALPDVVPAEGAGALWNFQASARSASSDDPKPPVEILMFNSGGTGARPLLDGLSATAFPSGVRTMSVEATEQVGPIVVWRKELRPDSGGAGRQRGGLGQVIEVGPSEGYQFEFSAMFDRVANPARGRQGGEPGAPG 702
            L VTLTV DDG HADFAGTSPT AHG+NVPLTYA AYF+Y MLVALAPE+P+N ASL  F+VSAP G ILNA HPEPVAVRHVIGHFVTDLCLGAIA ALPDVVPAEGAGALWNFQ SAR+       PP EILMFNSGGTGARP LDGL++TAFPSGVRTM  EATEQ GPIVVWRKELRPDSGGAGRQRGGLGQVIE+GP++GY F FS MFDRV NPARGR+GG  GAPG
Sbjct:  126 LVVTLTVTDDGAHADFAGTSPTCAHGVNVPLTYAHAYFSYAMLVALAPEMPSNHASLAAFSVSAPEGCILNARHPEPVAVRHVIGHFVTDLCLGAIADALPDVVPAEGAGALWNFQVSARAVDPSAGLPPREILMFNSGGTGARPALDGLNSTAFPSGVRTMPAEATEQAGPIVVWRKELRPDSGGAGRQRGGLGQVIELGPTDGYHFAFSCMFDRVENPARGRRGGGDGAPG 358          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97637.22491.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X6AP19_9ACTN7.070e-14788.46Hydantoinase B/oxoprolinase family protein n=1 Tax... [more]
A0A7K1Z908_9ACTN6.830e-14085.96Hydantoinase B/oxoprolinase family protein n=2 Tax... [more]
A0A2D7RWS9_9ACTN2.080e-13782.48Hydantoinase_B domain-containing protein n=1 Tax=A... [more]
A0A358A5P4_9ACTN5.830e-13783.765-oxoprolinase n=6 Tax=Acidimicrobiaceae bacterium... [more]
A0A520Y2N2_9ACTN3.270e-13180.43Hydantoinase B/oxoprolinase family protein n=3 Tax... [more]
UPI00034CB5523.340e-13180.43hydantoinase B/oxoprolinase family protein n=1 Tax... [more]
A0A7K1YWF1_9ACTN3.480e-13182.13Hydantoinase B/oxoprolinase family protein n=5 Tax... [more]
A0A351XDQ8_9ACTN1.090e-13081.205-oxoprolinase (Fragment) n=1 Tax=Acidimicrobiacea... [more]
A0A6B1ECP6_9ACTN1.410e-13082.05Hydantoinase B/oxoprolinase family protein n=2 Tax... [more]
A0A382B7X3_9ZZZZ1.180e-12981.12Hydantoinase_B domain-containing protein (Fragment... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97637contigM-pyrifera_M_contig97637:2..706 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score386.0
Seed ortholog evalue1.3e-104
Seed eggNOG ortholog1313172.YM304_20040
KEGG rclassRC00553,RC00632
KEGG koko:K01469,ko:K01474
KEGG ReactionR00251,R03187
KEGG Pathwayko00330,ko00480,ko01100,map00330,map00480,map01100
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Protein synonym hydantoin utilization protein B
EggNOG OGs2HWA8@201174,4CNVH@84992,COG0146@1,COG0146@2
EC3.5.2.14,3.5.2.9
COG Functional cat.EQ
Best tax levelAcidimicrobiia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size705
Cds size705
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816893.5791209-CDS-M-pyrifera_M_contig97637:1..7061622816893.5791209-CDS-M-pyrifera_M_contig97637:1..706Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97637 2..706 -
1692278240.835433-CDS-M-pyrifera_M_contig97637:1..7061692278240.835433-CDS-M-pyrifera_M_contig97637:1..706Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97637 2..706 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97637.22491.1prot_M-pyrifera_M_contig97637.22491.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig97637 2..706 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig97637.22491.1

>prot_M-pyrifera_M_contig97637.22491.1 ID=prot_M-pyrifera_M_contig97637.22491.1|Name=mRNA_M-pyrifera_M_contig97637.22491.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=235bp
TLAVTLTVDDDGMHADFAGTSPTSAHGINVPLTYAQAYFTYGMLVALAPE
LPNNFASLEPFTVSAPPGVILNAEHPEPVAVRHVIGHFVTDLCLGAIAQA
LPDVVPAEGAGALWNFQASARSASSDDPKPPVEILMFNSGGTGARPLLDG
LSATAFPSGVRTMSVEATEQVGPIVVWRKELRPDSGGAGRQRGGLGQVIE
VGPSEGYQFEFSAMFDRVANPARGRQGGEPGAPGA
back to top

mRNA from alignment at M-pyrifera_M_contig97637:2..706-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig97637.22491.1 ID=mRNA_M-pyrifera_M_contig97637.22491.1|Name=mRNA_M-pyrifera_M_contig97637.22491.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=705bp|location=Sequence derived from alignment at M-pyrifera_M_contig97637:2..706- (Macrocystis pyrifera P11B4 male)
ACCCTCGCGGTCACCCTCACCGTCGACGACGACGGTATGCACGCCGATTT CGCCGGCACCTCGCCGACCAGCGCCCACGGCATCAATGTGCCGCTCACCT ATGCCCAGGCGTACTTCACCTACGGCATGCTCGTGGCGCTCGCGCCCGAG CTCCCGAACAACTTCGCGTCGCTCGAACCCTTCACCGTGTCGGCCCCTCC CGGGGTCATCCTCAACGCCGAGCACCCCGAGCCGGTGGCCGTTCGCCATG TCATCGGCCACTTCGTCACCGACCTGTGTCTGGGGGCGATCGCCCAGGCG CTTCCCGACGTGGTCCCGGCCGAAGGAGCGGGGGCGCTCTGGAACTTCCA GGCCAGTGCTCGCAGCGCGTCGTCGGACGACCCGAAGCCACCGGTCGAGA TCCTGATGTTCAACAGTGGTGGCACCGGAGCCCGCCCCTTGCTCGATGGC CTCTCCGCCACCGCCTTTCCGTCCGGGGTGCGCACGATGTCGGTGGAAGC AACCGAACAGGTCGGCCCGATCGTCGTGTGGCGCAAGGAACTCCGGCCCG ACTCGGGCGGCGCCGGCCGTCAACGGGGCGGACTCGGCCAGGTCATCGAG GTCGGTCCGAGCGAGGGCTACCAGTTCGAGTTCTCGGCCATGTTCGACCG CGTCGCCAACCCGGCCCGCGGTCGCCAGGGCGGCGAGCCCGGCGCGCCGG GCGCG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig97637:2..706-

>mRNA_M-pyrifera_M_contig97637.22491.1 ID=mRNA_M-pyrifera_M_contig97637.22491.1|Name=mRNA_M-pyrifera_M_contig97637.22491.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1410bp|location=Sequence derived from alignment at M-pyrifera_M_contig97637:2..706- (Macrocystis pyrifera P11B4 male)
ACCCTCGCGGTCACCCTCACCGTCGACGACGACGGTATGCACGCCGATTT
CGCCGGCACCTCGCCGACCAGCGCCCACGGCATCAATGTGCCGCTCACCT
ATGCCCAGGCGTACTTCACCTACGGCATGCTCGTGGCGCTCGCGCCCGAG
CTCCCGAACAACTTCGCGTCGCTCGAACCCTTCACCGTGTCGGCCCCTCC
CGGGGTCATCCTCAACGCCGAGCACCCCGAGCCGGTGGCCGTTCGCCATG
TCATCGGCCACTTCGTCACCGACCTGTGTCTGGGGGCGATCGCCCAGGCG
CTTCCCGACGTGGTCCCGGCCGAAGGAGCGGGGGCGCTCTGGAACTTCCA
GGCCAGTGCTCGCAGCGCGTCGTCGGACGACCCGAAGCCACCGGTCGAGA
TCCTGATGTTCAACAGTGGTGGCACCGGAGCCCGCCCCTTGCTCGATGGC
CTCTCCGCCACCGCCTTTCCGTCCGGGGTGCGCACGATGTCGGTGGAAGC
AACCGAACAGGTCGGCCCGATCGTCGTGTGGCGCAAGGAACTCCGGCCCG
ACTCGGGCGGCGCCGGCCGTCAACGGGGCGGACTCGGCCAGGTCATCGAG
GTCGGTCCGAGCGAGGGCTACCAGTTCGAGTTCTCGGCCATGTTCGACCG
CGTCGCCAACCCGGCCCGCGGTCGCCAGGGCGGCGAGCCCGGCGCGCCGG
GCGCGACCCTCGCGGTCACCCTCACCGTCGACGACGACGGTATGCACGCC
GATTTCGCCGGCACCTCGCCGACCAGCGCCCACGGCATCAATGTGCCGCT
CACCTATGCCCAGGCGTACTTCACCTACGGCATGCTCGTGGCGCTCGCGC
CCGAGCTCCCGAACAACTTCGCGTCGCTCGAACCCTTCACCGTGTCGGCC
CCTCCCGGGGTCATCCTCAACGCCGAGCACCCCGAGCCGGTGGCCGTTCG
CCATGTCATCGGCCACTTCGTCACCGACCTGTGTCTGGGGGCGATCGCCC
AGGCGCTTCCCGACGTGGTCCCGGCCGAAGGAGCGGGGGCGCTCTGGAAC
TTCCAGGCCAGTGCTCGCAGCGCGTCGTCGGACGACCCGAAGCCACCGGT
CGAGATCCTGATGTTCAACAGTGGTGGCACCGGAGCCCGCCCCTTGCTCG
ATGGCCTCTCCGCCACCGCCTTTCCGTCCGGGGTGCGCACGATGTCGGTG
GAAGCAACCGAACAGGTCGGCCCGATCGTCGTGTGGCGCAAGGAACTCCG
GCCCGACTCGGGCGGCGCCGGCCGTCAACGGGGCGGACTCGGCCAGGTCA
TCGAGGTCGGTCCGAGCGAGGGCTACCAGTTCGAGTTCTCGGCCATGTTC
GACCGCGTCGCCAACCCGGCCCGCGGTCGCCAGGGCGGCGAGCCCGGCGC
GCCGGGCGCG
back to top