mRNA_M-pyrifera_M_contig97589.22480.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig97589.22480.1 vs. uniprot
Match: K4AV60_SOLLC (Uncharacterized protein n=1 Tax=Solanum lycopersicum TaxID=4081 RepID=K4AV60_SOLLC) HSP 1 Score: 69.7 bits (169), Expect = 6.470e-15 Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = -1 Query: 10 QKEGMQHEDFPGGHPS*YYSRPNSLNFGVLMGSGACELV 126 QK G++HEDFPGGHP YYSRPN+LNFGVLMGSGA L+ Sbjct: 13 QKGGIKHEDFPGGHPCYYYSRPNTLNFGVLMGSGAFVLI 51
BLAST of mRNA_M-pyrifera_M_contig97589.22480.1 vs. uniprot
Match: A0A5K1F0N5_9MAGN (Uncharacterized protein (Fragment) n=1 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1F0N5_9MAGN) HSP 1 Score: 66.2 bits (160), Expect = 3.120e-13 Identity = 28/32 (87.50%), Postives = 31/32 (96.88%), Query Frame = -1 Query: 28 KEGMQHEDFPGGHPS*YYSRPNSLNFGVLMGS 123 K+GMQHEDFPGGHPS YYSRP++LNFGVLMGS Sbjct: 49 KKGMQHEDFPGGHPSQYYSRPSTLNFGVLMGS 80
BLAST of mRNA_M-pyrifera_M_contig97589.22480.1 vs. uniprot
Match: A0A2K1IA13_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IA13_PHYPA) HSP 1 Score: 64.3 bits (155), Expect = 1.210e-12 Identity = 31/40 (77.50%), Postives = 33/40 (82.50%), Query Frame = 1 Query: 1 MRSYQLTCTGSHQNSEVKRVWARVVLGWVTSWEVLVLHPF 120 MRSYQ T SHQNSEVKR+WA +VLGWVTS EV VLHPF Sbjct: 1 MRSYQGYYTRSHQNSEVKRLWAGIVLGWVTSREVPVLHPF 40
BLAST of mRNA_M-pyrifera_M_contig97589.22480.1 vs. uniprot
Match: A0A835J590_9ROSI (Uncharacterized protein n=1 Tax=Salix dunnii TaxID=1413687 RepID=A0A835J590_9ROSI) HSP 1 Score: 67.0 bits (162), Expect = 2.140e-12 Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = -2 Query: 21 KKGCNTRTSQEVTHPSTTLAQTRLTSEF*WDPVH 122 K+GCNTRTSQEVTHPSTTLAQ RLTSEF WDPVH Sbjct: 71 KEGCNTRTSQEVTHPSTTLAQARLTSEFGWDPVH 104
BLAST of mRNA_M-pyrifera_M_contig97589.22480.1 vs. uniprot
Match: A0A5K1F893_9MAGN (Uncharacterized protein (Fragment) n=1 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1F893_9MAGN) HSP 1 Score: 64.7 bits (156), Expect = 4.910e-12 Identity = 29/37 (78.38%), Postives = 31/37 (83.78%), Query Frame = -1 Query: 13 KEGMQHEDFPGGHPS*YYSRPNSLNFGVLMGSGACEL 123 K GMQHEDFP GHPS YYS P++LNFGVLMGSGA L Sbjct: 101 KRGMQHEDFPRGHPSQYYSLPSTLNFGVLMGSGALVL 137
BLAST of mRNA_M-pyrifera_M_contig97589.22480.1 vs. uniprot
Match: A0A371FV47_MUCPR (Uncharacterized protein (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371FV47_MUCPR) HSP 1 Score: 62.8 bits (151), Expect = 9.660e-12 Identity = 32/38 (84.21%), Postives = 33/38 (86.84%), Query Frame = 3 Query: 6 IIPTHMHRIPSELRS*ASLGESSTRMGDLLGSPRVASL 119 IIP MHRIPSELRS A LG+SSTRMGDLLGSPRVA L Sbjct: 50 IIPVLMHRIPSELRSQACLGDSSTRMGDLLGSPRVAPL 87
BLAST of mRNA_M-pyrifera_M_contig97589.22480.1 vs. uniprot
Match: A0A2H9ZRU7_9ASPA (Uncharacterized protein n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2H9ZRU7_9ASPA) HSP 1 Score: 60.8 bits (146), Expect = 2.200e-11 Identity = 28/38 (73.68%), Postives = 29/38 (76.32%), Query Frame = -1 Query: 1 MQHEDFPGGHPS*YYSRPNSLNFGVLMGSGACELV*SH 114 MQHEDFP GHPS YYSRP+ LN GVLMGSG LV H Sbjct: 1 MQHEDFPRGHPSQYYSRPSMLNCGVLMGSGTLVLVWLH 38
BLAST of mRNA_M-pyrifera_M_contig97589.22480.1 vs. uniprot
Match: A0A834WXI1_9FABA (Protein NRT1/ PTR FAMILY 6.1 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834WXI1_9FABA) HSP 1 Score: 62.4 bits (150), Expect = 3.520e-11 Identity = 27/28 (96.43%), Postives = 27/28 (96.43%), Query Frame = 1 Query: 40 NSEVKRVWARVVLGWVTSWEVLVLHPFF 123 NSEVKR WARVVLGWVTSWEVLVLHPFF Sbjct: 19 NSEVKRAWARVVLGWVTSWEVLVLHPFF 46
BLAST of mRNA_M-pyrifera_M_contig97589.22480.1 vs. uniprot
Match: A0A438GIP5_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GIP5_VITVI) HSP 1 Score: 62.8 bits (151), Expect = 4.140e-11 Identity = 29/40 (72.50%), Postives = 31/40 (77.50%), Query Frame = 1 Query: 1 MRSYQLTCTGSHQNSEVKRVWARVVLGWVTSWEVLVLHPF 120 +RSYQ TGSHQNS VKR WA+VVLGWVTSWEVL F Sbjct: 54 LRSYQHQRTGSHQNSTVKRSWAKVVLGWVTSWEVLTRKQF 93
BLAST of mRNA_M-pyrifera_M_contig97589.22480.1 vs. uniprot
Match: A0A0B2P045_GLYSO (Uncharacterized protein (Fragment) n=1 Tax=Glycine soja TaxID=3848 RepID=A0A0B2P045_GLYSO) HSP 1 Score: 59.3 bits (142), Expect = 6.350e-11 Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = -1 Query: 13 MQHEDFPGGHPS*YYSRPNSLNFGVLMGSGACEL 114 +QHEDFPGGHP YYSRP++LN GVLMGSGA L Sbjct: 3 VQHEDFPGGHPFEYYSRPSTLNCGVLMGSGALVL 36 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97589.22480.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig97589.22480.1 >prot_M-pyrifera_M_contig97589.22480.1 ID=prot_M-pyrifera_M_contig97589.22480.1|Name=mRNA_M-pyrifera_M_contig97589.22480.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=45bp MRSYQLTCTGSHQNSEVKRVWARVVLGWVTSWEVLVLHPFFLCF*back to top mRNA from alignment at M-pyrifera_M_contig97589:412..546+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig97589.22480.1 ID=mRNA_M-pyrifera_M_contig97589.22480.1|Name=mRNA_M-pyrifera_M_contig97589.22480.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=135bp|location=Sequence derived from alignment at M-pyrifera_M_contig97589:412..546+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig97589:412..546+ >mRNA_M-pyrifera_M_contig97589.22480.1 ID=mRNA_M-pyrifera_M_contig97589.22480.1|Name=mRNA_M-pyrifera_M_contig97589.22480.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=270bp|location=Sequence derived from alignment at M-pyrifera_M_contig97589:412..546+ (Macrocystis pyrifera P11B4 male)back to top |