mRNA_M-pyrifera_M_contig97232.22395.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig97232.22395.1 vs. uniprot
Match: A0A2E0SYH7_9ACTN (Sugar dehydrogenase n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0SYH7_9ACTN) HSP 1 Score: 335 bits (858), Expect = 2.000e-111 Identity = 161/237 (67.93%), Postives = 180/237 (75.95%), Query Frame = 1 Query: 1 LDLSAETMAGGERGLLGIAVDTENLYVNFTDLDGTTHVDAFALDEAGRPGERHPLLTIEQPFSNHNGGGLAIGPDGHLYVGVGDGGSGGDPLGAGQDPTQILGSLLRIDPTPGAERPYEIPADNPYAQASVDTSGEQPEIFAIGLRNPWRFSFDPITDDLWIADVGQNEWEEINLLLGANGSGLGANLGWNLREATHEFSGERPIGNVDPVFEYPHDGATPSGCSISGGVVYRGLAV 711 LD++ ET A GERGLLG+AVD E LYVNFTDL GTT +DAF D GRPG R PLL I+QPF NHNGG LAIGPDG+LY+GVGDGG+ DPL AGQDP QILGS++RIDPTP PY IPADNPYA PEIF IGLRNPWR +FDP+T+DLW+ADVGQN WEEI LLLG NG G G NLGW LRE F+G+RP N+DPVF YPH PSGCSI+GG VYRG A+ Sbjct: 115 LDINDETTARGERGLLGLAVDDEALYVNFTDLSGTTTIDAFVFDARGRPGNRIPLLKIDQPFGNHNGGALAIGPDGNLYIGVGDGGAADDPLNAGQDPDQILGSIVRIDPTPTEREPYAIPADNPYANGDG-----VPEIFTIGLRNPWRIAFDPMTNDLWVADVGQNRWEEITLLLGTNGWGRGDNLGWRLREGASTFAGDRPENNIDPVFVYPHGNGVPSGCSITGGEVYRGSAI 346
BLAST of mRNA_M-pyrifera_M_contig97232.22395.1 vs. uniprot
Match: A0A6B0ZIK1_9ACTN (PQQ-dependent sugar dehydrogenase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0ZIK1_9ACTN) HSP 1 Score: 293 bits (749), Expect = 1.620e-96 Identity = 148/237 (62.45%), Postives = 172/237 (72.57%), Query Frame = 1 Query: 1 LDLSAETMAGGERGLLGIAVDTENLYVNFTDLDGTTHVDAFALDEAGRPGERHPLLTIEQPFSNHNGGGLAIGPDGHLYVGVGDGGSGGDPLGAGQDPTQILGSLLRIDPTPGAERPYEIPADNPYAQASVDTSGEQPEIFAIGLRNPWRFSFDPITDDLWIADVGQNEWEEINLLLGANGSGLGANLGWNLREATHEFSGERPIGNVDPVFEYPHDGATPSGCSISGGVVYRGLAV 711 +D+ AET A GERGLLGIAV LY NFTDL G T VDAF + G G R +L QPFSNHNGG LAIGPDG LYV GDGGSGGDPL AGQDPT LG++LRI+PTP A PY +P+DNP+A A D +G +PEIF G+RNPWRFSFD T DLWIADVGQ+ +EE+ +LL ANG GLGANLGW LRE H F+G+ P + DPV+EY D GCS++GG VYRG A+ Sbjct: 1 MDIGAETEATGERGLLGIAVTDRWLYANFTDLAGDTRVDAFEREGTGLSGHRRTILFQAQPFSNHNGGDLAIGPDGFLYVAFGDGGSGGDPLNAGQDPTTWLGAILRIEPTPDAAEPYAVPSDNPFA-ADPDKAG-RPEIFLTGVRNPWRFSFDRATGDLWIADVGQDAYEEVTVLLAANGGGLGANLGWRLREGLHRFTGDEPPDHADPVWEYSQD----DGCSVTGGYVYRGSAI 231
BLAST of mRNA_M-pyrifera_M_contig97232.22395.1 vs. uniprot
Match: A0A7K2EA08_9ACTN (PQQ-dependent sugar dehydrogenase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2EA08_9ACTN) HSP 1 Score: 294 bits (752), Expect = 1.150e-95 Identity = 151/237 (63.71%), Postives = 170/237 (71.73%), Query Frame = 1 Query: 1 LDLSAETMAGGERGLLGIAVDTENLYVNFTDLDGTTHVDAFALDEAGRPGERHPLLTIEQPFSNHNGGGLAIGPDGHLYVGVGDGGSGGDPLGAGQDPTQILGSLLRIDPTPGAERPYEIPADNPYAQASVDTSGEQPEIFAIGLRNPWRFSFDPITDDLWIADVGQNEWEEINLLLGANGSGLGANLGWNLREATHEFSGERPIGNVDPVFEYPHDGATPSGCSISGGVVYRGLAV 711 LD+ AET A GERGLLGIAV LY NFTDL G T VDAF D G G R +L QP+SNHNGG LAIGPDG LYV GDGGSGGDPL AGQDPT LG++LRI PTP A PY +PADNP+A A D +G PEIF G+RNPWRFSFD T DLWIADVGQN +EE+ +LL ANG GLGANLGW LRE H F+G+ P + DPV+EY D GCS++GG VYRG A+ Sbjct: 95 LDIGAETRATGERGLLGIAVTDRWLYANFTDLAGDTRVDAFERDGTGLSGHRRTILFQAQPYSNHNGGDLAIGPDGFLYVAFGDGGSGGDPLDAGQDPTTWLGAVLRIQPTPDAAEPYAVPADNPFA-AGQDRAG-LPEIFLTGVRNPWRFSFDRATGDLWIADVGQNAYEEVTVLLAANGGGLGANLGWRLREGLHYFTGDEPPDHADPVWEYSQD----DGCSVTGGYVYRGSAI 325
BLAST of mRNA_M-pyrifera_M_contig97232.22395.1 vs. uniprot
Match: A0A6N9EP91_9ACTN (PQQ-dependent sugar dehydrogenase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9EP91_9ACTN) HSP 1 Score: 295 bits (754), Expect = 1.660e-95 Identity = 146/237 (61.60%), Postives = 172/237 (72.57%), Query Frame = 1 Query: 1 LDLSAETMAGGERGLLGIAVDTENLYVNFTDLDGTTHVDAFALDEAGRPGERHPLLTIEQPFSNHNGGGLAIGPDGHLYVGVGDGGSGGDPLGAGQDPTQILGSLLRIDPTPGAERPYEIPADNPYAQASVDTSGEQPEIFAIGLRNPWRFSFDPITDDLWIADVGQNEWEEINLLLGANGSGLGANLGWNLREATHEFSGERPIGNVDPVFEYPHDGATPSGCSISGGVVYRGLAV 711 LD++AET A GE+GLLGIAV L+VNFTDL G T V+AF D +G G R +LT +QPF NHNGG LAIG DG LY+G GDGGSGGDPL AGQDPT LG++LRI+PTP PY IP DNP+ A +PEIF IG+RNPWRFSFD T DLWIADVGQ+ +EE+ +LL ANG GLGANLGW LRE H F+G+ P G+ DPV+EY D GCS++GG VYRG A+ Sbjct: 128 LDITAETRATGEQGLLGIAVADHWLFVNFTDLAGDTRVEAFERDGSGLSGRRRTILTQQQPFRNHNGGDLAIGEDGLLYIGFGDGGSGGDPLNAGQDPTTWLGAVLRIEPTPEGVEPYAIPPDNPFVAADGQDPAGRPEIFLIGVRNPWRFSFDRATGDLWIADVGQDSYEEVTVLLAANGGGLGANLGWRLREGLHVFAGDEPPGHADPVWEYGQD----DGCSVTGGFVYRGAAI 360
BLAST of mRNA_M-pyrifera_M_contig97232.22395.1 vs. uniprot
Match: A0A7K1ZDV0_9ACTN (PQQ-dependent sugar dehydrogenase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZDV0_9ACTN) HSP 1 Score: 291 bits (745), Expect = 7.480e-94 Identity = 145/241 (60.17%), Postives = 175/241 (72.61%), Query Frame = 1 Query: 1 LDLSAETMAGGERGLLGIAVDTENLYVNFTDLDGTTHVDAFALDEAGRPGERHPLLTIEQPFSNHNGGGLAIGPDGHLYVGVGDGGSGGDPLGAGQDPTQILGSLLRIDPTPGAERPYEIPADNPYAQASV---DTSGEQPEIFAIGLRNPWRFSFDPITDDLWIADVGQNEWEEINLLLGANGSGLGANLGWNLREATHEFSGERPIGNVDPVFEY-PHDGATPSGCSISGGVVYRGLAV 711 LDLSAET+A GE+GLLGIAV + LY NFTD + T ++AF + GER +L QP+ NHNGG + IGPDGHLYV GDGG+GGDPL GQ+PT LGS+LRI PTP + PY +PADNP+A A D S PE+F G+RNPWRFSFDP T DLWIADVGQ+ +EE+ +LL ANG G+GANLGW LRE HEF+G++P GNVDPV+EY PHDG CS++GG VYRG + Sbjct: 148 LDLSAETIAVGEQGLLGIAVSDDWLYANFTDKNSNTQLEAFKREGTSLSGERRTILRQTQPYRNHNGGAVVIGPDGHLYVAFGDGGAGGDPLDHGQNPTTWLGSILRITPTPDSTEPYAVPADNPFASAQGAQGDASLGSPEVFLFGVRNPWRFSFDPGTGDLWIADVGQDLYEEVTVLLAANGGGVGANLGWRLREGLHEFTGDKPPGNVDPVWEYGPHDG-----CSVTGGFVYRGSEI 383
BLAST of mRNA_M-pyrifera_M_contig97232.22395.1 vs. uniprot
Match: A0A6L7XDC5_9ACTN (Sugar dehydrogenase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6L7XDC5_9ACTN) HSP 1 Score: 292 bits (747), Expect = 9.140e-94 Identity = 149/237 (62.87%), Postives = 170/237 (71.73%), Query Frame = 1 Query: 1 LDLSAETMAGGERGLLGIAVDTENLYVNFTDLDGTTHVDAFALDEAGRPGERHPLLTIEQPFSNHNGGGLAIGPDGHLYVGVGDGGSGGDPLGAGQDPTQILGSLLRIDPTPGAERPYEIPADNPYAQASVDTSGEQPEIFAIGLRNPWRFSFDPITDDLWIADVGQNEWEEINLLLGANGSGLGANLGWNLREATHEFSGERPIGNVDPVFEYPHDGATPSGCSISGGVVYRGLAV 711 LD+ AET A GERGLLGIAV LY NFTDL G T VDAF D G G R +L QPFSNHNGG LAIGPDG LYV GDGGSGGDPL AGQDPT LG++LRI+PTP A PY +P DNP+A A D +G +PEIF G+RNPWR SFD T DLWIADVGQ+ +EE+ +LL ANG GLGANLGW LRE H F+G+ P + DPV+EY D GCS++GG VYRG A+ Sbjct: 184 LDIGAETEATGERGLLGIAVTDRWLYANFTDLAGNTRVDAFERDGTGLGGHRRTILFQPQPFSNHNGGDLAIGPDGFLYVAFGDGGSGGDPLNAGQDPTTWLGAVLRIEPTPDAAEPYAVPTDNPFA-AGQDGAG-RPEIFLTGVRNPWRLSFDRATGDLWIADVGQDAYEEVTVLLAANGGGLGANLGWRLREGLHRFTGDEPPNHADPVWEYSQD----DGCSVTGGYVYRGSAI 414
BLAST of mRNA_M-pyrifera_M_contig97232.22395.1 vs. uniprot
Match: A0A7K2ARC1_9ACTN (Sugar dehydrogenase n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2ARC1_9ACTN) HSP 1 Score: 290 bits (743), Expect = 2.000e-93 Identity = 148/237 (62.45%), Postives = 170/237 (71.73%), Query Frame = 1 Query: 1 LDLSAETMAGGERGLLGIAVDTENLYVNFTDLDGTTHVDAFALDEAGRPGERHPLLTIEQPFSNHNGGGLAIGPDGHLYVGVGDGGSGGDPLGAGQDPTQILGSLLRIDPTPGAERPYEIPADNPYAQASVDTSGEQPEIFAIGLRNPWRFSFDPITDDLWIADVGQNEWEEINLLLGANGSGLGANLGWNLREATHEFSGERPIGNVDPVFEYPHDGATPSGCSISGGVVYRGLAV 711 LD+ AET A GE+GLLGIAV LY NFTDL G T VDAF D G G R +L QPFSNHNGG LAIGPDG LYV GDGGSGGDPL AGQDPT LG++LRI+PTP A PY +P DNP+A A D +G +PEIF G+RNPWR SFD T DLWIADVGQ+ +EE+ +LL ANG GLGANLGW LRE H F+G+ P + DPV+EY D GCS++GG VYRG A+ Sbjct: 163 LDIGAETEATGEQGLLGIAVTDRWLYANFTDLAGNTRVDAFERDGTGLGGHRRTILFQPQPFSNHNGGDLAIGPDGFLYVAFGDGGSGGDPLNAGQDPTTWLGAVLRIEPTPDAAEPYAVPTDNPFA-AGQDGAG-RPEIFLTGVRNPWRLSFDRATGDLWIADVGQDAYEEVTVLLAANGGGLGANLGWRLREGLHRFTGDEPPNHADPVWEYSQD----DGCSVTGGYVYRGSAI 393
BLAST of mRNA_M-pyrifera_M_contig97232.22395.1 vs. uniprot
Match: A0A7K2BVL9_9ACTN (PQQ-dependent sugar dehydrogenase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2BVL9_9ACTN) HSP 1 Score: 285 bits (728), Expect = 6.400e-92 Identity = 147/231 (63.64%), Postives = 165/231 (71.43%), Query Frame = 1 Query: 1 LDLSAETMAGGERGLLGIAVDTENLYVNFTDLDGTTHVDAFALDEAGRPGERHPLLTIEQPFSNHNGGGLAIGPDGHLYVGVGDGGSGGDPLGAGQDPTQILGSLLRIDPTPGAERPYEIPADNPYAQASVDTSGEQPEIFAIGLRNPWRFSFDPITDDLWIADVGQNEWEEINLLLGANGSGLGANLGWNLREATHEFSGERPIGNVDPVFEYPHDGATPSGCSISGGVV 693 LD+ AET A GERGLLGIAV LY NFTDL G T VDAF D G G R +L QP+SNHNGG LAIGPDG LYV GDGGSGGDPL AGQDPT LG++LRI PTP A PY +PADNP+A A D +G PEIF G+RNPWRFSFD T DLWIADVGQN +EE+ +LL ANG GLGANLGW LRE H F+G+ P + DPV+EY D GCS++GG V Sbjct: 177 LDIGAETRATGERGLLGIAVTDRWLYANFTDLAGDTRVDAFERDGTGLSGHRRTILFQAQPYSNHNGGDLAIGPDGFLYVAFGDGGSGGDPLDAGQDPTTWLGAVLRIQPTPDAAEPYAVPADNPFA-AGQDRAG-LPEIFLTGVRNPWRFSFDRATGDLWIADVGQNAYEEVTVLLAANGGGLGANLGWRLREGLHYFTGDEPPDHADPVWEYSQD----DGCSVTGGYV 401
BLAST of mRNA_M-pyrifera_M_contig97232.22395.1 vs. uniprot
Match: A0A6I3WWN2_9ACTN (Sugar dehydrogenase n=2 Tax=root TaxID=1 RepID=A0A6I3WWN2_9ACTN) HSP 1 Score: 256 bits (654), Expect = 1.400e-80 Identity = 130/242 (53.72%), Postives = 167/242 (69.01%), Query Frame = 1 Query: 1 LDLSAETMAGGERGLLGIA--VDTENLYVNFTDLDGTTHVDAFALDEAGR--PGERHPLLTIEQPFSNHNGGGLAIGPDGHLYVGVGDGGSGGDPLGAGQDPTQILGSLLRIDPTPGAERPYEIPADNPYAQASVDTSGEQPEIFAIGLRNPWRFSFDPITDDLWIADVGQNEWEEINLLLGANGSGLGANLGWNLREATHEFSGERPIGNVD-PVFEYPHDGATPSGCSISGGVVYRGLAV 711 LD+S+ ++G E+GLLG+A D E+ YV++TD DG T + FA+ G P R LLTI QP+ NHNGG + GPDG LY+G+GDGGSGGDP D +LG +LRIDPTP A RPY IPADNP+ ++ G +PEI++IGLRNPWRF+FD DLWIADVGQ++WEEI++ + G+G GAN GW+ E TH F+ ++P V P+FEYPH A GCSI+GGV YRG A+ Sbjct: 112 LDISSIIVSGNEQGLLGMAFAADGEHAYVDYTDRDGNTVIAEFAVGSNGTFDPASRRELLTINQPYPNHNGGAIRFGPDGLLYIGMGDGGSGGDPDRRALDTGDLLGKILRIDPTPSAGRPYTIPADNPF----INVPGARPEIWSIGLRNPWRFNFDRTNGDLWIADVGQDQWEEIDVATASTGAGRGANFGWSAFEGTHRFNEDQPADGVTMPIFEYPHGSA---GCSIAGGVRYRGSAI 346
BLAST of mRNA_M-pyrifera_M_contig97232.22395.1 vs. uniprot
Match: A0A838PXM6_9ACTN (PQQ-dependent sugar dehydrogenase n=1 Tax=Euzebyaceae bacterium TaxID=2740542 RepID=A0A838PXM6_9ACTN) HSP 1 Score: 256 bits (653), Expect = 4.840e-80 Identity = 138/240 (57.50%), Postives = 164/240 (68.33%), Query Frame = 1 Query: 1 LDLSAETMAGGERGLLGIAV--DTENLYVNFTDLDGTTHVDAFAL-DEAGRPGERHPLLTIEQPFSNHNGGGLAIGPDGHLYVGVGDGGSGGDPLGAGQDPTQILGSLLRIDPTPGAERPYEIPADNPYAQASVDTSGEQPEIFAIGLRNPWRFSFDPITDDLWIADVGQNEWEEINLLLGANGSGLGANLGWNLREATHEFSGERPIGNVDPVFEYPHDGATPSGCSISGGVVYRGLAV 711 LDLS +T+A ERGLLGIA D LY ++T+LDG T +DA+ D P R LL ++QPF+NHNGG +AIGPD LY+G+GDGGS GDP G GQDP +LGSLLRIDP G+ PY IP DNP+ +D +G QPEI+A GLRNPWRFSFD T DLWIADVGQ EEI+ +G G AN GWNLRE +SGE P NV+PVF+Y DG CS++GG VYRG AV Sbjct: 153 LDLSEQTVAESERGLLGIAFSPDGRTLYASYTNLDGDTRLDAYDFADATADPSSRRELLAVDQPFANHNGGNVAIGPDDLLYLGLGDGGSAGDPHGHGQDPGTLLGSLLRIDP--GSGDPYAIPEDNPF----LDRAGAQPEIYAYGLRNPWRFSFDRDTGDLWIADVGQGAREEIDYA--PSGQGARANYGWNLREGAISYSGEPPADNVEPVFDYGRDGGR---CSVTGGYVYRGAAV 381 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97232.22395.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig97232.22395.1 >prot_M-pyrifera_M_contig97232.22395.1 ID=prot_M-pyrifera_M_contig97232.22395.1|Name=mRNA_M-pyrifera_M_contig97232.22395.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=230bp MAGGERGLLGIAVDTENLYVNFTDLDGTTHVDAFALDEAGRPGERHPLLTback to top mRNA from alignment at M-pyrifera_M_contig97232:1..711- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig97232.22395.1 ID=mRNA_M-pyrifera_M_contig97232.22395.1|Name=mRNA_M-pyrifera_M_contig97232.22395.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=711bp|location=Sequence derived from alignment at M-pyrifera_M_contig97232:1..711- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig97232:1..711- >mRNA_M-pyrifera_M_contig97232.22395.1 ID=mRNA_M-pyrifera_M_contig97232.22395.1|Name=mRNA_M-pyrifera_M_contig97232.22395.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1380bp|location=Sequence derived from alignment at M-pyrifera_M_contig97232:1..711- (Macrocystis pyrifera P11B4 male)back to top |