mRNA_M-pyrifera_M_contig97134.22376.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig97134.22376.1
Unique NamemRNA_M-pyrifera_M_contig97134.22376.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig97134.22376.1 vs. uniprot
Match: A0A8J2SRV7_9STRA (alpha-1,2-Mannosidase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRV7_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.500e-43
Identity = 103/238 (43.28%), Postives = 141/238 (59.24%), Query Frame = 1
Query:    1 DEVEPLRCRGRRWDQRERGTLDDSLGGFPLTAIDALASQAQLGDVVGFRESVARVERHLRVDRDVSVSVFETTIRVVGGLLASHGLLRDTNLGPILRGTELPPHHLRALHSHTLEPAEVLALDSPLPYNDSLLHAAEKLGHRIVDAHSMSGTGLPYHLMQLSGISISKGL--EKEVETCTAAAGTAILELGALTAWTGNVSFLDAAADAIHALWTRRSHGTGLVGSTIDVKRGTWRSP 708
            DE+ PL C GRRWD R+RGTLDDSLGG+ +T +D + +Q  +GD   F  S+  +   +  DRDVSVS FE TIRV+GGLL++H L+ +    P+LR     P  LRA  + TL+ + V   D+   +   L   A  LG R++ A   + TG+P H      +++ +GL  ++  ETC AAAGT +LE   L+  TG+  +   A +A+ ALW RRS  T LVGSTI  K G W SP
Sbjct:   50 DELLPLSCEGRRWDARKRGTLDDSLGGYMMTLVDGVDTQLVVGDHEAFARSLDIITSEVSFDRDVSVSTFEATIRVLGGLLSAHYLVTE----PVLR-----PAILRAAANSTLDASPV---DTRRRWARELKGLAADLGARLLPAFR-TPTGIPAHR-----VNLRRGLLNDESRETCAAAAGTMLLEFARLSRLTGDRRYAQKAREAVDALWRRRSARTDLVGSTICAKTGRWLSP 269          
BLAST of mRNA_M-pyrifera_M_contig97134.22376.1 vs. uniprot
Match: A0A7S1G7Y3_9STRA (alpha-1,2-Mannosidase (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G7Y3_9STRA)

HSP 1 Score: 166 bits (419), Expect = 2.550e-43
Identity = 101/239 (42.26%), Postives = 140/239 (58.58%), Query Frame = 1
Query:    1 DEVEPLRCRGRRWDQRERGTLDDSLGGFPLTAIDALASQAQLGDVVGFRESVARVERHLRVDRDVSVSVFETTIRVVGGLLASHGLLRDTNLGPILRGTELPPHHLRALHSHTLEPAEVLALDSPLPYNDSLLHAAEKLGHRIVDAHSMSGTGLPYHLMQLSGISISKGLE--KEVETCTAAAGTAILELGALTAWTGNVSFLDAAADAIHALWTRRSHGTGLVGSTIDVKRGTWRSPH 711
            DE++PL C+GRRWD+R RG LDD+LGGF  T +D+L + A LGD   F+ +V RV++ +R DR+V+VSVFETTIRV+GGLL++H +  D  LG                    + P E         Y+  LL  AE LG R++ A   + TG+P H      +++  G+E  +   TCTAAAG+ ++E G L+  TG   F DAA  A+ ALW RRS    L+G+T+D + G W  PH
Sbjct:  154 DELKPLSCKGRRWDRRVRGDLDDALGGFSTTLVDSLDALAVLGDFGEFQAAVQRVKK-VRFDRNVTVSVFETTIRVLGGLLSAHLIAADAELG-------------------VMPPGE---------YDGELLSMAEDLGERLLPAFD-TPTGIPVHR-----VNLRHGVEPRERGRTCTAAAGSLLVEFGLLSRLTGRPQFEDAARGAVDALWERRS-SIDLIGATVDARSGQWLQPH 356          
BLAST of mRNA_M-pyrifera_M_contig97134.22376.1 vs. uniprot
Match: A0A2R5GE19_9STRA (alpha-1,2-Mannosidase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GE19_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.180e-41
Identity = 102/236 (43.22%), Postives = 134/236 (56.78%), Query Frame = 1
Query:    1 DEVEPLRCRGRRWDQRERGTLDDSLGGFPLTAIDALASQAQLGDVVGFRESVARVERHLRVDRDVSVSVFETTIRVVGGLLASHGLLRDTNLGPILRGTELPPHHLRALHSHTLEPAEVLALDSPLPYNDSLLHAAEKLGHRIVDAHSMSGTGLPYHLMQLSGISISKGLE--KEVETCTAAAGTAILELGALTAWTGNVSFLDAAADAIHALWTRRSHGTGLVGSTIDVKRGTWR 702
            DE++PL C GRRWD+RERGT+DD+LGGF LT IDAL S A +G    F +SV  V R +  DRDV+VSVFETTIRV+GGLL++H LL +        GT                   V        Y   LL  A  LG R++ A   + TG+PYH      +++ +G+E  +   TCTAAAGT ++E G L+  +    F   A  A+ ALW R+   TGLVG+TI V+ G W+
Sbjct:   69 DELKPLSCSGRRWDRRERGTIDDTLGGFSLTLIDALDSLAVMGRYEAFYDSVDLVRRDVSFDRDVTVSVFETTIRVLGGLLSAHLLLEN--------GT-------------------VPQAPQDWAYKGELLDLAVDLGERLLPAFE-TATGIPYHR-----VNLLRGVEPRETTFTCTAAAGTLLMEFGLLSRLSARPEFEAKARRAMLALWNRKHPDTGLVGNTICVRTGKWQ 271          
BLAST of mRNA_M-pyrifera_M_contig97134.22376.1 vs. uniprot
Match: A0A5A8DIV3_CAFRO (alpha-1,2-Mannosidase n=6 Tax=Sar TaxID=2698737 RepID=A0A5A8DIV3_CAFRO)

HSP 1 Score: 157 bits (396), Expect = 3.540e-40
Identity = 113/291 (38.83%), Postives = 142/291 (48.80%), Query Frame = 1
Query:    1 DEVEPLRCRGRRWDQRERGTLDDSLGGFPLTAIDALASQAQLGDVVGFRESVARVERHLRVDRDVSVSVFETTIRVVGGLLASHGLLRDTNLGPILRGTEL---PPHHLRALHSHTLEPAEVLALDSPLP-----YNDSLLHAAEKLGHRIVDAHS--------------------------------------------------MSGTGLPYHLMQLSGISISKGLEKEVETCTAAAGTAILELGALTAWTGNVSFLDAAADAIHALWTRRSHGTGLVGSTIDVKRGTW 699
            DE+ PL CR R+W++RERGTLDDSLGGF LTA+D L S A LGD  GF      +   +RVDRDVSVSVFE TIRV+GGL+ SH +  +      L   E    PP            P  V AL S +P     Y+  LL  A  LGHR+  A++                                                   SG  LP HL+ L+  +  + L  E  TC+AAAGTA+LE   L+A+TGN S    AA +  AL+  R+ GTGLVGS++DV    W
Sbjct:   72 DELRPLSCRPRKWNERERGTLDDSLGGFALTAVDGLQSLALLGDAAGFERHGRHICETVRVDRDVSVSVFEATIRVLGGLVTSHAIAEEGEAAAELLAAEAEGRPP-----------APWAVGALAS-VPRLWPGYDGCLLRLAADLGHRLAPAYTDAELSDSRLPSRLAAAELRALQQARARASGNASAAAMQPLPGPVTPAIAAHSGAPLPRHLVNLARGTTPR-LRAEASTCSAAAGTALLEAVLLSAFTGNQSLAILAARSTAALFAARAPGTGLVGSSVDVLSAQW 349          
BLAST of mRNA_M-pyrifera_M_contig97134.22376.1 vs. uniprot
Match: F0YJE6_AURAN (alpha-1,2-Mannosidase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJE6_AURAN)

HSP 1 Score: 149 bits (376), Expect = 8.140e-39
Identity = 99/238 (41.60%), Postives = 137/238 (57.56%), Query Frame = 1
Query:    1 DEVEPLRCRGRRWDQRERGTLDDSLGGFPLTAIDALASQAQLGDVVGFRESVARVERHLRVDRDVSVSVFETTIRVVGGLLASHGLLRDTNLGPILRGTELPPHHLRALHSHTLEPAEVLALDSPLPYNDSLLHAAEKLGHRIVDAHSMSGTGLPYHLMQLS-GISISKGLEKEVETCTAAAGTAILELGALTAWTGNVSFLDAAADAIHALWTRRSHGTGLVGSTIDVKRGTWRSPH 711
            DE+ PL C+GRRWD+R RGTLDD LGG+ +T +D   +   +GD   F  ++  +   L  DRDV+VS FE  IRV+GGLL++H L+    L P +         LRA  + T +PA   A+D    +  SL   A  LG R++ A   + TG+P H + L  G++ S+  E    TC+AAAGT +LE+  L+A TG+  F  AA  A+  LW RRS  T LVGST+    G W +P+
Sbjct:   49 DELMPLSCQGRRWDKRRRGTLDDVLGGYLMTLVDGADTMLTIGDYESFAATLDVIAATLTFDRDVTVSTFEACIRVLGGLLSAHYLVTADALRPAV---------LRAAANAT-DPAA--AVDR---WARSLRSLATDLGRRLLPAFD-TPTGIPAHRVNLRRGVATSESRE----TCSAAAGTMLLEMSKLSALTGDGRFEAAARRALDELWRRRSKVTDLVGSTVHTHTGQWLAPN 266          
BLAST of mRNA_M-pyrifera_M_contig97134.22376.1 vs. uniprot
Match: A0A7S3K5T7_9STRA (alpha-1,2-Mannosidase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K5T7_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.150e-38
Identity = 97/237 (40.93%), Postives = 132/237 (55.70%), Query Frame = 1
Query:    1 DEVEPLRCRGRRWDQRERGTLDDSLGGFPLTAIDALASQAQLGDVVGFRESVARVERHLRVDRDVSVSVFETTIRVVGGLLASHGLLRDTNLGPILRGTELPPHHLRALHSHTLEPAEVLALDSPLPYNDSLLHAAEKLGHRIVDAHSMSGTGLPYHLMQLSGISISKGLEKEVETCTAAAGTAILELGALTAWTGNVSFLDAAADAIHALWTRRSHGTGLVGSTIDVKRGTWRSPH 711
            DE+ P+ C+GRRWD+++RGTLDDSLGG+ LT ID L + A +G    F E +  V   L  +R+V VS FE TIRV+GGLL+ H L+ +  L   +  +       R   S   +   + AL+        LL  A +LG R++ A     TGLP HL+ L      K   ++ ETCTAAAGT ILE   L+  TG+  F   A  +I A+W+RRS    L+GS+ID   G W + H
Sbjct:   51 DELLPISCKGRRWDKKKRGTLDDSLGGYMLTLIDGLDTLAVMGKYDEFEEKIKLVAAELSFNRNVKVSTFEATIRVLGGLLSLHTLISEPRLRQRIFFSYKEDMQ-RNKKSIIKKKKNLDALER------RLLELARELGERLLPAFETE-TGLPVHLINLK---TGKAKNEQRETCTAAAGTYILEFARLSRLTGDTRFEQVAIRSIQAIWSRRSE-RNLIGSSIDTSSGKWLAKH 275          
BLAST of mRNA_M-pyrifera_M_contig97134.22376.1 vs. uniprot
Match: A0A7S1UF79_9STRA (alpha-1,2-Mannosidase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UF79_9STRA)

HSP 1 Score: 146 bits (369), Expect = 5.670e-37
Identity = 97/237 (40.93%), Postives = 131/237 (55.27%), Query Frame = 1
Query:    1 DEVEPLRCRGRRWDQRERGTLDDSLGGFPLTAIDALASQAQLGDVVGFRESVARVERHLRVDRDVSVSVFETTIRVVGGLLASHGLLRDTNLGPILRGTELPPHHLRALHSHTLEPAEVLALDSPLPYNDSLLHAAEKLGHRIVDAHSMSGTGLPYHLMQLSGISISKGLEKEVETCTAAAGTAILELGALTAWTGNVSFLDAAADAIHALWTRRSHGTGLVGSTIDVKRGTWRSPH 711
            DE+ PL CRGR  + R+RGTLDDSLGGF LT +D+L + A  G+   F E++  V   +R D +V VSVFET IRV+GGLLA+H L             E     LR      L             Y+  LL  A+ LG R++ A + + TG+P+H + L   S +    ++  TCTAAAG+ ++E+G L+  TG+  F + A  A+ ALW RRS    LVGS IDV  G W + H
Sbjct:  104 DELMPLSCRGRHHEDRKRGTLDDSLGGFALTLVDSLDALALQGNFTAFAEAIYEVRDSVRFDNNVYVSVFETNIRVLGGLLAAHQL------------AERFRDRLRDRDGRLLG------------YDGFLLRQAQDLGSRLLPAFN-TPTGIPFHRINLRTRSAAP--REKRHTCTAAAGSLLVEMGLLSRLTGDSRFEEKAQRAVDALWERRSD-IQLVGSLIDVDTGKWMTSH 312          
BLAST of mRNA_M-pyrifera_M_contig97134.22376.1 vs. uniprot
Match: A9UPZ7_MONBE (alpha-1,2-Mannosidase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UPZ7_MONBE)

HSP 1 Score: 146 bits (368), Expect = 1.310e-36
Identity = 94/238 (39.50%), Postives = 130/238 (54.62%), Query Frame = 1
Query:    1 DEVEPLRCRGR-RWDQRERGTLDDSLGGFPLTAIDALASQAQLGDVVGFRESVARVERHLRVDRDVSVSVFETTIRVVGGLLASHGLLRDTNLGPILRGTELPPHHLRALHSHTLEPAEVLALDSPLPYNDSLLHAAEKLGHRIVDAHSMSGTGLPYHLMQLSGISISKGLEKEVE----TCTAAAGTAILELGALTAWTGNVSFLDAAADAIHALWTRRSHGTGLVGSTIDVKRGTW 699
            DE+ PL C+GR R   + RG +DD+LG F LT ID L +   L ++  F+ ++  VE+H++ D DV VS FET IRV+GGLLA+H L+ D    P  R                    E+LA      Y+D LL  A  LG R++ A   + TG+PY     S I++  G+  EV     TCTA AGT I+E  AL+ + GN  +  AA  A+ A+W RR   + LVG+TI++  G W
Sbjct:   17 DELMPLSCKGRVRGRDKSRGDIDDALGHFSLTLIDTLDTLVILNNITEFKRAIGLVEQHVKFDTDVVVSTFETNIRVLGGLLAAHALMLDLRGQPTYR--------------------ELLA-----SYDDGLLKLAVDLGDRLMKAFD-TPTGIPY-----SKINLRHGVTPEVRSSDVTCTACAGTLIMEFAALSRFAGNPVYEQAARRALEAIWIRRGSPSDLVGTTINISSGAW 223          
BLAST of mRNA_M-pyrifera_M_contig97134.22376.1 vs. uniprot
Match: A0A4E0RJ32_FASHE (alpha-1,2-Mannosidase n=2 Tax=Fasciola hepatica TaxID=6192 RepID=A0A4E0RJ32_FASHE)

HSP 1 Score: 146 bits (369), Expect = 1.430e-36
Identity = 100/238 (42.02%), Postives = 131/238 (55.04%), Query Frame = 1
Query:    1 DEVEPLRCRGR-RWDQRERGTLDDSLGGFPLTAIDALASQAQLGDVVGFRESVARVERHLRVDRDVSVSVFETTIRVVGGLLASH---GLLRDTNLGPILRGTELPPHHLRALHSHTLEPAEVLALDSPLPYNDSLLHAAEKLGHRIVDAHSMSGTGLPYHLMQLSGISISKGLEK-EVETCTAAAGTAILELGALTAWTGNVSFLDAAADAIHALWTRRSHGTGLVGSTIDVKRGTW 699
            DE+ PL CRGR R+    RG +DD+LG F LT IDAL S   LG++  F  +V+ V R +  D DV VSVFET IRV+GGLL  H    L+R  N                  HS  +             YND LLH A  +G+R++ A   S TG+P+  + L     ++GL+K EV TCTA AGT ILE  AL+  TGN  + + AA A++ LW +RS  + LVG  I+V+ G W
Sbjct:   54 DELMPLSCRGRHRYTHVSRGDVDDALGNFSLTMIDALDSLFLLGELDEFESAVSLVVRDVSFDSDVDVSVFETNIRVLGGLLGGHVAASLVRKAN------------------HSRLMW------------YNDDLLHMAVDIGNRLLPAFDTS-TGIPFPRVNLK--YGNRGLKKQEVNTCTACAGTMILEFAALSRLTGNAVYEEKAAHALNYLWKQRSRYSNLVGRVINVQSGEW 258          
BLAST of mRNA_M-pyrifera_M_contig97134.22376.1 vs. uniprot
Match: K8Z9W4_NANGC (alpha-1,2-Mannosidase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z9W4_NANGC)

HSP 1 Score: 135 bits (339), Expect = 1.030e-34
Identity = 81/197 (41.12%), Postives = 112/197 (56.85%), Query Frame = 1
Query:    1 DEVEPLRCRGRRWDQRERGTLDDSLGGFPLTAIDALASQAQLGDVVGFRESVARVERHLRVDRDVSVSVFETTIRVVGGLLASHGLLRDTNLGPILRGTELPPHHLRALHSHTLEPAEVLALDSPLPYNDSLLHAAEKLGHRIVDAHSMSGTGLPYHLMQLSGISISKGLEKEVETCTAAAGTAILELGALTAWTGN 591
            DE+ PL C+GR W +R+RGTLDD LGG+ LT +D+L   A +GD + F ++V  V R LR DR+V+VSVFE TIRV+GGLL++H +L    + P+ R                         ++  PY   LL  A  LG R++ A     TG+P H + L    + +G  +E  TCTAAAGT +LE G L+  TG+
Sbjct:  138 DELMPLSCKGRDWRKRDRGTLDDPLGGYALTLVDSLDMLAVIGDYLDFYQAVQEVIRTLRFDRNVTVSVFEATIRVLGGLLSAHSILLSEEMAPVFR-------------------------NATPPYQGELLRLAYDLGQRLLPAFETQ-TGIPIHRVNLEH-GVPRGETRE--TCTAAAGTLLLEFGLLSRLTGD 305          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97134.22376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J2SRV7_9STRA1.500e-4343.28alpha-1,2-Mannosidase n=1 Tax=Pelagomonas calceola... [more]
A0A7S1G7Y3_9STRA2.550e-4342.26alpha-1,2-Mannosidase (Fragment) n=1 Tax=Bicosoeci... [more]
A0A2R5GE19_9STRA1.180e-4143.22alpha-1,2-Mannosidase n=1 Tax=Hondaea fermentalgia... [more]
A0A5A8DIV3_CAFRO3.540e-4038.83alpha-1,2-Mannosidase n=6 Tax=Sar TaxID=2698737 Re... [more]
F0YJE6_AURAN8.140e-3941.60alpha-1,2-Mannosidase (Fragment) n=1 Tax=Aureococc... [more]
A0A7S3K5T7_9STRA1.150e-3840.93alpha-1,2-Mannosidase n=1 Tax=Aureoumbra lagunensi... [more]
A0A7S1UF79_9STRA5.670e-3740.93alpha-1,2-Mannosidase n=1 Tax=Phaeomonas parva Tax... [more]
A9UPZ7_MONBE1.310e-3639.50alpha-1,2-Mannosidase n=1 Tax=Monosiga brevicollis... [more]
A0A4E0RJ32_FASHE1.430e-3642.02alpha-1,2-Mannosidase n=2 Tax=Fasciola hepatica Ta... [more]
K8Z9W4_NANGC1.030e-3441.12alpha-1,2-Mannosidase (Fragment) n=1 Tax=Nannochlo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97134contigM-pyrifera_M_contig97134:3..713 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score154.1
Seed ortholog evalue8.3e-35
Seed eggNOG ortholog4792.ETI40930
Preferred nameEDEM3
KEGG koko:K10086
KEGG Pathwayko04141,map04141
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004553,GO:0004559,GO:0004571,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0006464,GO:0006491,GO:0006508,GO:0006511,GO:0006516,GO:0006517,GO:0006807,GO:0006950,GO:0006986,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009100,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0012505,GO:0015923,GO:0015924,GO:0016787,GO:0016798,GO:0019538,GO:0019941,GO:0023052,GO:0030163,GO:0030433,GO:0030968,GO:0031974,GO:0033554,GO:0034620,GO:0034976,GO:0035966,GO:0035967,GO:0035977,GO:0036211,GO:0036503,GO:0036507,GO:0036508,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044322,GO:0044422,GO:0044424,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051603,GO:0051716,GO:0065007,GO:0070013,GO:0070887,GO:0071310,GO:0071704,GO:0097466,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901700,GO:1904382,GO:1904587
EggNOG free text desc.Glycosyl hydrolase family 47
EggNOG OGs3QCTX@4776,KOG2430@1,KOG2430@2759
Ec32 ortholog descriptionER degradation-enhancing alpha-mannosidase-like 1, family GH47
Ec32 orthologEc-12_004080.1
COG Functional cat.G
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04091
Exons1
Model size711
Cds size711
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816887.9404514-CDS-M-pyrifera_M_contig97134:2..7131622816887.9404514-CDS-M-pyrifera_M_contig97134:2..713Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97134 3..713 -
1692278237.474671-CDS-M-pyrifera_M_contig97134:2..7131692278237.474671-CDS-M-pyrifera_M_contig97134:2..713Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig97134 3..713 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97134.22376.1prot_M-pyrifera_M_contig97134.22376.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig97134 3..713 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig97134.22376.1

>prot_M-pyrifera_M_contig97134.22376.1 ID=prot_M-pyrifera_M_contig97134.22376.1|Name=mRNA_M-pyrifera_M_contig97134.22376.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=237bp
DEVEPLRCRGRRWDQRERGTLDDSLGGFPLTAIDALASQAQLGDVVGFRE
SVARVERHLRVDRDVSVSVFETTIRVVGGLLASHGLLRDTNLGPILRGTE
LPPHHLRALHSHTLEPAEVLALDSPLPYNDSLLHAAEKLGHRIVDAHSMS
GTGLPYHLMQLSGISISKGLEKEVETCTAAAGTAILELGALTAWTGNVSF
LDAAADAIHALWTRRSHGTGLVGSTIDVKRGTWRSPH
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mRNA from alignment at M-pyrifera_M_contig97134:3..713-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig97134.22376.1 ID=mRNA_M-pyrifera_M_contig97134.22376.1|Name=mRNA_M-pyrifera_M_contig97134.22376.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=711bp|location=Sequence derived from alignment at M-pyrifera_M_contig97134:3..713- (Macrocystis pyrifera P11B4 male)
GATGAAGTGGAGCCTCTGCGTTGCAGGGGACGGCGTTGGGACCAACGAGA GAGAGGAACTTTGGATGACTCTTTGGGTGGATTTCCTCTTACTGCCATCG ACGCACTTGCGTCACAGGCCCAGCTTGGGGACGTGGTTGGGTTTCGGGAG AGCGTGGCACGTGTAGAGCGGCACCTTAGGGTTGATCGGGACGTGTCCGT CAGTGTCTTTGAGACCACCATTCGAGTCGTGGGGGGACTACTTGCCTCGC ATGGCCTGCTGCGTGATACCAACCTTGGCCCAATTTTGCGCGGGACAGAA TTACCTCCACATCACCTAAGAGCGCTTCATTCTCATACTCTCGAACCTGC AGAGGTGTTGGCACTCGATTCTCCATTGCCTTACAACGATTCACTCCTGC ATGCTGCAGAAAAGCTTGGGCACCGCATTGTTGATGCTCATTCCATGTCT GGTACGGGTCTTCCGTATCATCTCATGCAGTTATCAGGTATCTCTATTTC AAAGGGTCTTGAGAAAGAGGTTGAAACCTGTACAGCCGCTGCAGGGACTG CAATTTTAGAGCTTGGAGCCCTGACTGCTTGGACTGGCAATGTGTCTTTC CTTGATGCTGCTGCAGATGCCATCCATGCACTATGGACTCGGAGATCCCA TGGTACTGGACTCGTTGGTAGCACAATTGATGTAAAAAGAGGCACATGGC GATCACCACAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig97134:3..713-

>mRNA_M-pyrifera_M_contig97134.22376.1 ID=mRNA_M-pyrifera_M_contig97134.22376.1|Name=mRNA_M-pyrifera_M_contig97134.22376.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1422bp|location=Sequence derived from alignment at M-pyrifera_M_contig97134:3..713- (Macrocystis pyrifera P11B4 male)
GATGAAGTGGAGCCTCTGCGTTGCAGGGGACGGCGTTGGGACCAACGAGA
GAGAGGAACTTTGGATGACTCTTTGGGTGGATTTCCTCTTACTGCCATCG
ACGCACTTGCGTCACAGGCCCAGCTTGGGGACGTGGTTGGGTTTCGGGAG
AGCGTGGCACGTGTAGAGCGGCACCTTAGGGTTGATCGGGACGTGTCCGT
CAGTGTCTTTGAGACCACCATTCGAGTCGTGGGGGGACTACTTGCCTCGC
ATGGCCTGCTGCGTGATACCAACCTTGGCCCAATTTTGCGCGGGACAGAA
TTACCTCCACATCACCTAAGAGCGCTTCATTCTCATACTCTCGAACCTGC
AGAGGTGTTGGCACTCGATTCTCCATTGCCTTACAACGATTCACTCCTGC
ATGCTGCAGAAAAGCTTGGGCACCGCATTGTTGATGCTCATTCCATGTCT
GGTACGGGTCTTCCGTATCATCTCATGCAGTTATCAGGTATCTCTATTTC
AAAGGGTCTTGAGAAAGAGGTTGAAACCTGTACAGCCGCTGCAGGGACTG
CAATTTTAGAGCTTGGAGCCCTGACTGCTTGGACTGGCAATGTGTCTTTC
CTTGATGCTGCTGCAGATGCCATCCATGCACTATGGACTCGGAGATCCCA
TGGTACTGGACTCGTTGGTAGCACAATTGATGTAAAAAGAGGCACATGGC
GATCACCACACGATGAAGTGGAGCCTCTGCGTTGCAGGGGACGGCGTTGG
GACCAACGAGAGAGAGGAACTTTGGATGACTCTTTGGGTGGATTTCCTCT
TACTGCCATCGACGCACTTGCGTCACAGGCCCAGCTTGGGGACGTGGTTG
GGTTTCGGGAGAGCGTGGCACGTGTAGAGCGGCACCTTAGGGTTGATCGG
GACGTGTCCGTCAGTGTCTTTGAGACCACCATTCGAGTCGTGGGGGGACT
ACTTGCCTCGCATGGCCTGCTGCGTGATACCAACCTTGGCCCAATTTTGC
GCGGGACAGAATTACCTCCACATCACCTAAGAGCGCTTCATTCTCATACT
CTCGAACCTGCAGAGGTGTTGGCACTCGATTCTCCATTGCCTTACAACGA
TTCACTCCTGCATGCTGCAGAAAAGCTTGGGCACCGCATTGTTGATGCTC
ATTCCATGTCTGGTACGGGTCTTCCGTATCATCTCATGCAGTTATCAGGT
ATCTCTATTTCAAAGGGTCTTGAGAAAGAGGTTGAAACCTGTACAGCCGC
TGCAGGGACTGCAATTTTAGAGCTTGGAGCCCTGACTGCTTGGACTGGCA
ATGTGTCTTTCCTTGATGCTGCTGCAGATGCCATCCATGCACTATGGACT
CGGAGATCCCATGGTACTGGACTCGTTGGTAGCACAATTGATGTAAAAAG
AGGCACATGGCGATCACCACAC
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