mRNA_M-pyrifera_M_contig96690.22269.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig96690.22269.1
Unique NamemRNA_M-pyrifera_M_contig96690.22269.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig96690.22269.1 vs. uniprot
Match: A0A8H4N2F4_9PEZI (Ubiquinone menaquinone biosynthesis-related protein n=1 Tax=Botryosphaeria dothidea TaxID=55169 RepID=A0A8H4N2F4_9PEZI)

HSP 1 Score: 79.0 bits (193), Expect = 1.670e-15
Identity = 40/81 (49.38%), Postives = 60/81 (74.07%), Query Frame = 1
Query:    1 AETYEEWSKSFDDDLDAEERMLLMPLIRKFLVKKAEGVVLEVSAGTGRNVEYYDAGKVRSVSLLDRSAGMLDVAKRKLDGL 243
            ++ Y+ ++  FD+D+ + E+ + +  +R+ LV KA G VLEVSAGTGRN  +YD GKVR++ LLD+SA ML+VAK+K + L
Sbjct:   99 SDRYDAYAARFDEDVGSTEKTIGIDRLRRKLVSKAHGDVLEVSAGTGRNTAFYDWGKVRALVLLDQSAPMLEVAKKKWEEL 179          
BLAST of mRNA_M-pyrifera_M_contig96690.22269.1 vs. uniprot
Match: R1G6V3_BOTPV (Putative ubiquinone menaquinone biosynthesis-related protein n=1 Tax=Botryosphaeria parva (strain UCR-NP2) TaxID=1287680 RepID=R1G6V3_BOTPV)

HSP 1 Score: 77.0 bits (188), Expect = 2.900e-15
Identity = 38/81 (46.91%), Postives = 60/81 (74.07%), Query Frame = 1
Query:    1 AETYEEWSKSFDDDLDAEERMLLMPLIRKFLVKKAEGVVLEVSAGTGRNVEYYDAGKVRSVSLLDRSAGMLDVAKRKLDGL 243
            ++ Y+  +  FD+++   E+ L +  +RK + ++A+G VLE+SAGTGRN ++YD G+VRS+ LLD+SA ML+VAKRK + L
Sbjct:   99 SDRYDHTAAKFDEEVGGTEKALGLNRLRKKMARQAQGDVLELSAGTGRNTQFYDWGRVRSLVLLDQSAPMLEVAKRKWEEL 179          
BLAST of mRNA_M-pyrifera_M_contig96690.22269.1 vs. uniprot
Match: A0A4S2N6Z2_9PEZI (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Ascodesmis nigricans TaxID=341454 RepID=A0A4S2N6Z2_9PEZI)

HSP 1 Score: 75.9 bits (185), Expect = 9.080e-15
Identity = 35/73 (47.95%), Postives = 56/73 (76.71%), Query Frame = 1
Query:   10 YEEWSKSFDDDLDAEERMLLMPLIRKFLVKKAEGVVLEVSAGTGRNVEYYDAGKVRSVSLLDRSAGMLDVAKR 228
            Y+E + ++D  +   E  + +PL+R+++VKKA G VLE SAGTGRN++YY+ GK+RS++ +D S+ ML+VAK+
Sbjct:   45 YDEIAPTYDSGISTSEFWMGLPLLRRWMVKKATGDVLESSAGTGRNMKYYNVGKLRSITFVDTSSPMLEVAKQ 117          
BLAST of mRNA_M-pyrifera_M_contig96690.22269.1 vs. uniprot
Match: A0A1W5CW41_9LECA (S-adenosyl-L-methionine-dependent methyltransferase-like n=2 Tax=Lasallia pustulata TaxID=136370 RepID=A0A1W5CW41_9LECA)

HSP 1 Score: 73.2 bits (178), Expect = 1.160e-13
Identity = 34/81 (41.98%), Postives = 58/81 (71.60%), Query Frame = 1
Query:    1 AETYEEWSKSFDDDLDAEERMLLMPLIRKFLVKKAEGVVLEVSAGTGRNVEYYDAGKVRSVSLLDRSAGMLDVAKRKLDGL 243
            ++ Y   +K FDD ++  E+++ + L+RK L K+A G VLEVS GTGRN++YY+  K +S++++D+S  M+++AK+K   L
Sbjct:   69 SDRYNNTAKEFDDQVNLTEQIMGIGLLRKSLTKRASGDVLEVSVGTGRNMKYYNFKKCKSITMVDQSEEMIEIAKQKFKDL 149          
BLAST of mRNA_M-pyrifera_M_contig96690.22269.1 vs. uniprot
Match: A0A0D2APB7_9PEZI (Uncharacterized protein n=1 Tax=Verruconis gallopava TaxID=253628 RepID=A0A0D2APB7_9PEZI)

HSP 1 Score: 73.6 bits (179), Expect = 1.590e-13
Identity = 36/74 (48.65%), Postives = 55/74 (74.32%), Query Frame = 1
Query:   10 YEEWSKSFDDDLDAEERMLLMPLIRKFLVKKAEGVVLEVSAGTGRNVEYYDAGKVRSVSLLDRSAGMLDVAKRK 231
            Y+E++  FD+D+D  E    +  +R  LVK+A G VLE +AGTGRN EYY + ++RS++++D+SAGML VA++K
Sbjct:  156 YDEYAPHFDEDVDRTEYWNGIHTLRSRLVKQARGDVLESAAGTGRNAEYYVSSRIRSLTIVDKSAGMLAVAEKK 229          
BLAST of mRNA_M-pyrifera_M_contig96690.22269.1 vs. uniprot
Match: A0A3N4LMC2_9PEZI (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Terfezia boudieri ATCC MYA-4762 TaxID=1051890 RepID=A0A3N4LMC2_9PEZI)

HSP 1 Score: 71.2 bits (173), Expect = 6.350e-13
Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 1
Query:   10 YEEWSKSFDDDLDAEERMLLMPLIRKFLVKKAEGVVLEVSAGTGRNVEYYDAGKVRSVSLLDRSAGMLDVAKR 228
            Y+  +K +D ++   E  + MPL+R+ L +K EG VLEVSAGTGRN++YY      S++L+D S+ MLD A+R
Sbjct:   76 YDRIAKDYDSNIKLSEFWMGMPLLRRLLARKLEGHVLEVSAGTGRNIKYYPVNHCGSITLVDSSSSMLDQARR 148          
BLAST of mRNA_M-pyrifera_M_contig96690.22269.1 vs. uniprot
Match: R4XH76_TAPDE (Ubiquinone/menaquinone biosynthesis-related protein n=1 Tax=Taphrina deformans (strain PYCC 5710 / ATCC 11124 / CBS 356.35 / IMI 108563 / JCM 9778 / NBRC 8474) TaxID=1097556 RepID=R4XH76_TAPDE)

HSP 1 Score: 71.2 bits (173), Expect = 6.930e-13
Identity = 35/76 (46.05%), Postives = 54/76 (71.05%), Query Frame = 1
Query:    4 ETYEEWSKSFDDDLDAEERMLLMPLIRKFLVKKAEGVVLEVSAGTGRNVEYYDAGKVRSVSLLDRSAGMLDVAKRK 231
            E Y+E + ++D  +  +E ++ +  +R   +K   G VLEVSAGTGRN+ YYDA KV+S++L+D+S+ MLDVA+ K
Sbjct:   88 EVYDEIASTYDTSISLDETLMGLGWLRWNHIKDVSGDVLEVSAGTGRNLSYYDADKVKSLTLVDQSSPMLDVAREK 163          
BLAST of mRNA_M-pyrifera_M_contig96690.22269.1 vs. uniprot
Match: A0A1B2JIE6_PICPA (BA75_04671T0 n=3 Tax=Komagataella TaxID=460517 RepID=A0A1B2JIE6_PICPA)

HSP 1 Score: 71.2 bits (173), Expect = 1.210e-12
Identity = 35/76 (46.05%), Postives = 52/76 (68.42%), Query Frame = 1
Query:    4 ETYEEWSKSFDDDLDAEERMLLMPLIRKFLVKKAEGVVLEVSAGTGRNVEYYDAGKVRSVSLLDRSAGMLDVAKRK 231
            E Y E + ++D D++ EE +  M   RK+L+K+ EG VLEV+ GTGRN++Y D  +V S++ LD S  ML++AK K
Sbjct:  206 ELYNELAPNYDSDINLEETLSFMGSKRKWLMKEIEGDVLEVACGTGRNIKYLDPTQVSSITFLDTSTKMLEIAKEK 281          
BLAST of mRNA_M-pyrifera_M_contig96690.22269.1 vs. uniprot
Match: A0A165GR13_XYLHT (Ubiquinone/menaquinone biosynthesis-related protein n=1 Tax=Xylona heveae (strain CBS 132557 / TC161) TaxID=1328760 RepID=A0A165GR13_XYLHT)

HSP 1 Score: 69.7 bits (169), Expect = 1.500e-12
Identity = 34/77 (44.16%), Postives = 54/77 (70.13%), Query Frame = 1
Query:    1 AETYEEWSKSFDDDLDAEERMLLMPLIRKFLVKKAEGVVLEVSAGTGRNVEYYDAGKVRSVSLLDRSAGMLDVAKRK 231
            ++ Y E ++ FD D+   E M+ +  +RK L K+AEG VLEVS GTGRN+EYY   K +S++++D S  M+++A++K
Sbjct:   22 SDRYNESAEHFDSDVGTIEWMMGLLKMRKKLAKEAEGDVLEVSVGTGRNIEYYSLDKCKSITMVDLSPEMVEIARKK 98          
BLAST of mRNA_M-pyrifera_M_contig96690.22269.1 vs. uniprot
Match: A0A2T3AQ48_AMORE (Uncharacterized protein (Fragment) n=1 Tax=Amorphotheca resinae ATCC 22711 TaxID=857342 RepID=A0A2T3AQ48_AMORE)

HSP 1 Score: 70.1 bits (170), Expect = 1.890e-12
Identity = 40/99 (40.40%), Postives = 60/99 (60.61%), Query Frame = 1
Query:   10 YEEWSKSFDDDLDAEERMLLMPLIRKFLVKKAEGVVLEVSAGTGRNVEYYD---------------------AGKVRSVSLLDRSAGMLDVAKRKLDGL 243
            Y+  +++FD  +D+ ER+L +  +R+ L  +A+G VLEVS GTGRN+EYY+                      GKV+S++ LD+SA MLDVA+ KL+ L
Sbjct:   59 YDSIARTFDTSVDSTERVLRIAALRRKLAARAQGDVLEVSIGTGRNLEYYEWDXXXXXXXXXXXPGKAGEKGKGKVKSLTALDKSAEMLDVARAKLETL 157          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig96690.22269.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8H4N2F4_9PEZI1.670e-1549.38Ubiquinone menaquinone biosynthesis-related protei... [more]
R1G6V3_BOTPV2.900e-1546.91Putative ubiquinone menaquinone biosynthesis-relat... [more]
A0A4S2N6Z2_9PEZI9.080e-1547.95S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A1W5CW41_9LECA1.160e-1341.98S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A0D2APB7_9PEZI1.590e-1348.65Uncharacterized protein n=1 Tax=Verruconis gallopa... [more]
A0A3N4LMC2_9PEZI6.350e-1346.58S-adenosyl-L-methionine-dependent methyltransferas... [more]
R4XH76_TAPDE6.930e-1346.05Ubiquinone/menaquinone biosynthesis-related protei... [more]
A0A1B2JIE6_PICPA1.210e-1246.05BA75_04671T0 n=3 Tax=Komagataella TaxID=460517 Rep... [more]
A0A165GR13_XYLHT1.500e-1244.16Ubiquinone/menaquinone biosynthesis-related protei... [more]
A0A2T3AQ48_AMORE1.890e-1240.40Uncharacterized protein (Fragment) n=1 Tax=Amorpho... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig96690contigM-pyrifera_M_contig96690:474..716 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score77.8
Seed ortholog evalue2.6e-12
Seed eggNOG ortholog310453.XP_007588691.1
KEGG koko:K17803
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0031967,GO:0031975,GO:0032259,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464
EggNOG free text desc.Methyltransferase domain
EggNOG OGs202HN@147541,3A122@33154,3P2D4@4751,3QUCI@4890,COG0500@1,KOG4300@2759
COG Functional cat.Q
Best tax levelDothideomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03029
Exons1
Model size243
Cds size243
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816881.8168497-CDS-M-pyrifera_M_contig96690:473..7161622816881.8168497-CDS-M-pyrifera_M_contig96690:473..716Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig96690 474..716 +
1692278233.8826535-CDS-M-pyrifera_M_contig96690:473..7161692278233.8826535-CDS-M-pyrifera_M_contig96690:473..716Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig96690 474..716 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig96690.22269.1prot_M-pyrifera_M_contig96690.22269.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig96690 474..716 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig96690.22269.1

>prot_M-pyrifera_M_contig96690.22269.1 ID=prot_M-pyrifera_M_contig96690.22269.1|Name=mRNA_M-pyrifera_M_contig96690.22269.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=81bp
AETYEEWSKSFDDDLDAEERMLLMPLIRKFLVKKAEGVVLEVSAGTGRNV
EYYDAGKVRSVSLLDRSAGMLDVAKRKLDGL
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mRNA from alignment at M-pyrifera_M_contig96690:474..716+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig96690.22269.1 ID=mRNA_M-pyrifera_M_contig96690.22269.1|Name=mRNA_M-pyrifera_M_contig96690.22269.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=243bp|location=Sequence derived from alignment at M-pyrifera_M_contig96690:474..716+ (Macrocystis pyrifera P11B4 male)
GCAGAAACGTATGAGGAATGGAGTAAATCGTTTGATGACGACCTGGACGC GGAGGAAAGGATGCTTCTGATGCCATTGATCCGAAAATTTCTTGTGAAAA AGGCTGAAGGTGTGGTATTAGAGGTGTCGGCGGGAACAGGGAGGAACGTG GAGTACTATGATGCTGGAAAAGTGCGTTCTGTTTCTTTATTGGACCGTTC TGCGGGGATGTTGGATGTTGCAAAGAGAAAACTGGATGGGTTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig96690:474..716+

>mRNA_M-pyrifera_M_contig96690.22269.1 ID=mRNA_M-pyrifera_M_contig96690.22269.1|Name=mRNA_M-pyrifera_M_contig96690.22269.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=486bp|location=Sequence derived from alignment at M-pyrifera_M_contig96690:474..716+ (Macrocystis pyrifera P11B4 male)
GCAGAAACGTATGAGGAATGGAGTAAATCGTTTGATGACGACCTGGACGC
GGAGGAAAGGATGCTTCTGATGCCATTGATCCGAAAATTTCTTGTGAAAA
AGGCTGAAGGTGTGGTATTAGAGGTGTCGGCGGGAACAGGGAGGAACGTG
GAGTACTATGATGCTGGAAAAGTGCGTTCTGTTTCTTTATTGGACCGTTC
TGCGGGGATGTTGGATGTTGCAAAGAGAAAACTGGATGGGTTGGCAGAAA
CGTATGAGGAATGGAGTAAATCGTTTGATGACGACCTGGACGCGGAGGAA
AGGATGCTTCTGATGCCATTGATCCGAAAATTTCTTGTGAAAAAGGCTGA
AGGTGTGGTATTAGAGGTGTCGGCGGGAACAGGGAGGAACGTGGAGTACT
ATGATGCTGGAAAAGTGCGTTCTGTTTCTTTATTGGACCGTTCTGCGGGG
ATGTTGGATGTTGCAAAGAGAAAACTGGATGGGTTG
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