mRNA_M-pyrifera_M_contig96673.22263.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig96673.22263.1
Unique NamemRNA_M-pyrifera_M_contig96673.22263.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig96673.22263.1 vs. uniprot
Match: A0A5A8DTA8_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DTA8_CAFRO)

HSP 1 Score: 134 bits (338), Expect = 1.620e-32
Identity = 110/268 (41.04%), Postives = 153/268 (57.09%), Query Frame = 1
Query:   19 DDEGESKEGGARPSQAYFVIKAAQKREELQRKGDELNAAVLHAEREIRALLATLSQVKKRNAVYRESFRRADG-GREGKAVTSLKAKAEEATDAVFRRKRELRRVAADTERALAQTEEARQQRAALESHVASLKESAERVQRERERQAAMLRAHEEQSQRLRSAV---RRAA-------------------ATGDEE--------------------ELCLEERAIRVQSLRTNSHVVLYTLGQLAAEYPELAEPLRTAAQANALKIP 693
            DD+GE K      +QAYFVIKAAQ+REELQR+GDELNAAVL AERE RAL ATL+Q+++RN  YRESF++AD   R+ + V +L+   +++T+A++RRKREL+  AA T  A A+  +  Q+RAAL+S +  L+  A  VQ +R+ Q A +   EE    +R AV   RRAA                   + GD +                    E    E  ++  ++   +  VL+TLGQLA E+P+L  PLR A +   L+IP
Sbjct:  734 DDDGEPK------TQAYFVIKAAQQREELQREGDELNAAVLTAEREARALTATLAQLQRRNTAYRESFQKADPRSRDAETVATLETLGKDSTEAMYRRKRELQDTAAATGEAKARAADLAQRRAALQSQLQRLRGIAADVQAQRDDQVAAV---EEAKAAVRQAVQELRRAAPPSSVPARVAPSGGDGGDDSDGDRDGAAGAEAEGKEAVGDVGVGAEATAGELRVKAAAMEHGNASVLFTLGQLAREFPQLTAPLRAALRRKGLQIP 992          
BLAST of mRNA_M-pyrifera_M_contig96673.22263.1 vs. uniprot
Match: A0A6T6VX58_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A6T6VX58_9STRA)

HSP 1 Score: 134 bits (337), Expect = 2.060e-32
Identity = 96/228 (42.11%), Postives = 141/228 (61.84%), Query Frame = 1
Query:   13 DSDDEGESKEGGARPSQAYFVIKAAQKREELQRKGDELNAAVLHAEREIRALLATLSQVKKRNAVYRESFRRAD-GGREGKAVTSLKAKAEEATDAVFRRKRELRRVAADTERALAQTEEARQQRAALESHVASLKESAERVQRERERQAAMLRAHEEQSQRLRSAVRRAAATGDEEELCLEERAIRVQSLRTNSHVVLYTLGQLAAEYPELAEPLRTAAQANALKIP 693
            DSDD+GE        +QAY+VIKAAQKREELQR+GDEL+  +  AEREIRAL  TL  +  RN  YR SF +AD G RE +   +L+ + + A DA+FR+K+EL+R+  D E    +  +  +Q A++E+H+  L ++  +V+RE   Q A +     + ++L +A R A+      E  L+E+A   Q++R  ++ VL+TLGQLA E+PEL   L  A Q   L++P
Sbjct:  600 DSDDDGEEH------TQAYYVIKAAQKREELQREGDELDGLIRKAEREIRALENTLKHLNVRNTEYRASFHKADLGSREAQQARNLEEQVKTAKDALFRKKKELQRMQTDLEEDRRRVAQLDEQIASMEAHIEHLSQTQAQVEREEAEQRAAIEKAARRVEQLSTAHRVASGVPAATET-LDEKAFMAQAVRDTNNNVLFTLGQLAREFPELQGSLAMAVQRYGLRMP 820          
BLAST of mRNA_M-pyrifera_M_contig96673.22263.1 vs. uniprot
Match: A0A7S4D4Q2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4Q2_HETAK)

HSP 1 Score: 131 bits (329), Expect = 2.490e-31
Identity = 92/212 (43.40%), Postives = 133/212 (62.74%), Query Frame = 1
Query:   61 QAYFVIKAAQKREELQRKGDELNAAVLHAEREIRALLATLSQVKKRNAVYRESFRRAD-GGREGKAVTSLKAKAEEATDAVFRRKRELRRVAADTERALAQTEEARQQRAALESHVASLKESAERVQRERERQAAMLRAHEEQSQRLRSAVRRAAATGDEEELCLEERAIRVQSLRTNSHVVLYTLGQLAAEYPELAEPLRTAAQANALKIP 693
            QAY+VI+AAQ+REELQR+GDEL+AA+   ERE+RAL +TL  +  RNA YR +F++AD   ++  A+ +L+ KA  A DA+FR+K+EL+R   D E   A+ E+  +Q   LE   + L+ +  +V  E   QA  L   + +  RLR A R AA T +E    L E+A R ++L   +  VLYTLGQL  E+PE+ + L+   Q + L+IP
Sbjct:  651 QAYYVIQAAQRREELQREGDELDAAIRTTERELRALQSTLDHLNDRNAAYRGAFQKADMSSQDADALRALEEKARLAADALFRQKKELQRAQTDWEEDAARLEQVTEQAERLEEQNSHLETARRQVDAEVSAQALTLERAQARLARLREAHRHAAGTTEE---TLAEKAFRGEALGETAATVLYTLGQLGREFPEIHDVLQMQVQKSGLQIP 859          
BLAST of mRNA_M-pyrifera_M_contig96673.22263.1 vs. uniprot
Match: A0A8J2SE05_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SE05_9STRA)

HSP 1 Score: 119 bits (297), Expect = 4.680e-27
Identity = 93/218 (42.66%), Postives = 130/218 (59.63%), Query Frame = 1
Query:   34 SKEGGARPSQAYFVIKAAQKREELQRKGDELNAAVLHAEREIRALLATLSQVKKRNAVYRESFRRAD-GGREGKAVTSLKAKAEEATDAVFRRKRELRRVAADTERALAQTEEARQQRAALESHVASLKESAERVQRERERQAAMLRAHEEQSQRLRSAVRRAAATGDEEELCLEERAIRVQSLRTNSHVVLYTLGQLAAEYPELAEPLRTAAQANAL 684
            S+EGG   SQAY++I+AAQKREELQR+GDEL+  +   ERE+RAL ATL  V  RN  YR SF++A+    E + +  L+ +A+ A DA+FRRK+EL+R+A D E    +  +   Q   LE     L E+ ++++ E   Q   L  H+E+  RL SA+ R    GD EE  ++E+  R + LR  +  VL TLG LA  YPEL + L    Q + L
Sbjct:  675 SEEGGEPKSQAYYMIQAAQKREELQRQGDELDQEIRRREREMRALEATLRHVNVRNTKYRTSFQKANMKSGEAEDMKQLEEQAKLAADALFRRKKELQRLATDFEEDDRRLRQVEGQCTRLEERNGHLAEAKQQMEVELAAQDEALEKHDERLSRL-SALHR----GDGEEETVQEKHFRAEGLRDATKSVLRTLGDLAKAYPELKDVLNATLQDHGL 887          
BLAST of mRNA_M-pyrifera_M_contig96673.22263.1 vs. uniprot
Match: H3H5S2_PHYRM (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=H3H5S2_PHYRM)

HSP 1 Score: 115 bits (287), Expect = 1.050e-25
Identity = 86/236 (36.44%), Postives = 140/236 (59.32%), Query Frame = 1
Query:   16 SDDEGESKEGGARPSQAYFVIKAAQKREELQRKGDELNAAVLHAEREIRALLATLSQVKKRNAVYRESFRRAD-GGREGKAVTSLKAKAEEATDAVFRRKRELRRVAADTERALAQTEEARQQRAALESHVASLKESAERVQRERERQAA----MLRAHEEQSQRLRSAVRRAAATGDEEELC-----LEERAIRVQSLRTNSHVVLYTLGQLAAEYPELAEPLRTAAQANALKIP 693
            +DD+G++ E G   SQAYFVI+AAQ+REELQR+GDEL+  +  AE+++RAL  TL+ +++RN+ YR+SF RAD  G + + + +L+A+A+ A D  F++K+EL RV  D      +  E   QR    ++   L  +  +V+RE + + A    +++  E Q +  R     A+   D++         E+  +    L+  S  +LYTLGQLA+E+PE+ +PL+ A +   + IP
Sbjct:  782 ADDDGDTGEAGKERSQAYFVIRAAQRREELQREGDELDDKIRVAEKDVRALKKTLAHLEERNSAYRKSFHRADLAGDDAQRLATLEAQAKMAEDTFFKKKKELARVELDVMSETQRLREVETQRDFARANATQLDGALSQVEREVQTERAKWGKVVKKLERQMREHRQFAVSASGFDDDDGKADSWRTKEQVMLDALELKEISASLLYTLGQLASEFPEIGDPLQMAVRDAGMHIP 1017          
BLAST of mRNA_M-pyrifera_M_contig96673.22263.1 vs. uniprot
Match: A0A3R7FY08_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7FY08_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.420e-25
Identity = 90/235 (38.30%), Postives = 138/235 (58.72%), Query Frame = 1
Query:   13 DSDDEGESKEGGARPSQAYFVIKAAQKREELQRKGDELNAAVLHAEREIRALLATLSQVKKRNAVYRESFRRAD-GGREGKAVTSLKAKAEEATDAVFRRKRELRRVAADTERALAQTEEARQQRAALESHVASLKESAERVQRERERQAA----MLRAHEEQSQRLRSAVRRAAATGDEEEL---CLEERAIRVQSLRTNSHVVLYTLGQLAAEYPELAEPLRTAAQANALKIP 693
            DSDD GE+   G   SQAYFVI+AAQ+REELQR+GDEL+  +  AE+++RAL  TL+ ++ RN+ YR+SF RAD  G + + + +L+A+A+ A D  F++K+EL RV  D      +  E   QR    ++   L+ +  +V+RE + + A    +++  E Q +  R     A+   D +       E+ A+    L+  S  +LYTLGQLA E+PE+ + L+TA Q   + IP
Sbjct:  762 DSDDAGEA---GKERSQAYFVIRAAQRREELQREGDELDDKIRIAEKDVRALKKTLAHLEDRNSAYRKSFHRADLAGDDAQRLAALEAQAKMAEDNFFKKKKELTRVELDVTSETQRLHEVETQRDFARANTTQLEGALSQVEREVQMERAKWGKVVKKLERQMREHRQYAVNASGYDDAKSSNWRTKEQVALEALELKEISASLLYTLGQLANEFPEIGDTLQTAVQEAGMHIP 993          
BLAST of mRNA_M-pyrifera_M_contig96673.22263.1 vs. uniprot
Match: A0A7S2B6P8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B6P8_9STRA)

HSP 1 Score: 111 bits (277), Expect = 2.130e-24
Identity = 82/226 (36.28%), Postives = 135/226 (59.73%), Query Frame = 1
Query:   19 DDEGESKEGGARPSQAYFVIKAAQKREELQRKGDELNAAVLHAEREIRALLATLSQVKKRNAVYRESFRRADGGREGK-AVTSLKAKAEEATDAVFRRKRELRRVAADTERALAQTEEARQQRAALESHVASLKESAERVQRERERQAAMLRAHEEQSQRLRSAVRRAAATGDEEELCLEERAIRVQSLRTNSHVVLYTLGQLAAEYPELAEPLRTAAQANALKIP 693
            DDEG    GG   SQA+++I+AAQ+REELQR+GD+L+ A+  AE+E RA+  TL  +  +N  +R S ++AD  RE +  + S + +++ A D +F++K+EL+R+  D E    + E+ +QQ   L+     L+ +  +++ E E Q  M+     +  R+  + R    + +E    L+E+  RV+S + ++  VLYTLGQLA EYPE  + L+   Q+ +L IP
Sbjct:  566 DDEG----GGEPKSQAFYLIQAAQRREELQREGDDLDQAIRKAEKETRAMDHTLKHLNDKNGAFRMSHQKADMSREEQDRIRSFEEQSKLAQDVLFKKKKELQRLQTDFEEDSRRLEQVQQQAQRLDDRAQHLENAQNQMESELEAQKEMVDKTTRRVHRMSGSHREKQGSIEE---TLQEKQFRVESTQESTQNVLYTLGQLAKEYPETKDVLQVLLQSMSLSIP 784          
BLAST of mRNA_M-pyrifera_M_contig96673.22263.1 vs. uniprot
Match: A0A067CMC9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CMC9_SAPPC)

HSP 1 Score: 110 bits (276), Expect = 3.000e-24
Identity = 88/229 (38.43%), Postives = 130/229 (56.77%), Query Frame = 1
Query:   28 GESKEGGARPSQAYFVIKAAQKREELQRKGDELNAAVLHAEREIRALLATLSQVKKRNAVYRESFRRADG-GREGKAVTSLKAKAEEATDAVFRRKRELRRVAADTERALAQTEEARQQRAALESHVASLKESAERV----QRERERQAAMLRAHEEQSQRLRSAVR--RAAATGDEEELCLEERAIRVQSLRTNSHVVLYTLGQLAAEYPELAEPLRTAAQANALKIP 693
            G   E G   SQAYFVIKAAQ+REELQR+GD+L+  +  AE+E+RAL  TL+ ++ RN  YR+SF RAD  G +   +  L+ + + A D +F+RK+EL+R+  D E    +  E   Q    + H  +L  +  +V    + ER+R   +       ++RL   VR  RA     E E  +EE  +   + +  +H +LYTLGQLA E+PEL++PL  + +   L IP
Sbjct:  688 GNIDEDGQERSQAYFVIKAAQRREELQREGDDLDDKIRVAEKEVRALTKTLAHLEGRNTEYRKSFHRADMVGEDAIKMNQLEDQVKVAEDTLFKRKKELQRLEMDMEAEQHRIAELEMQARHFKDHNENLHAAQAQVLKELETERDRGVKI-------TKRLDRLVRDHRANRIVSEHEKTIEEVVLETYNAKEVNHSLLYTLGQLAHEFPELSDPLHESVKGQNLHIP 909          
BLAST of mRNA_M-pyrifera_M_contig96673.22263.1 vs. uniprot
Match: A0A1V9YGC4_9STRA (Flagella associated protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGC4_9STRA)

HSP 1 Score: 110 bits (274), Expect = 5.550e-24
Identity = 89/230 (38.70%), Postives = 134/230 (58.26%), Query Frame = 1
Query:   28 GESKEGGARPSQAYFVIKAAQKREELQRKGDELNAAVLHAEREIRALLATLSQVKKRNAVYRESFRRADG-GREGKAVTSLKAKAEEATDAVFRRKRELRRVAADTERALAQTEEARQQRAA-LESHVASLKESAERVQRERERQAAMLRAHEEQ----SQRLRSAVR--RAAATGDEEELCLEERAIRVQSLRTNSHVVLYTLGQLAAEYPELAEPLRTAAQANALKIP 693
            G + + G   SQAYFVIKAAQ+REELQR+GD+L+  +  AE+E+RAL  TL+ ++ RN  YR+SF RAD  G E   +  L+ + + A D +F+RK+EL+R+  + E        A Q R A LE+     K+  E +   + +    L A +++    ++RL   VR  R A    + E  +EE  + +   +  +H +LYTLGQLA E+PEL++PL    +A+ L IP
Sbjct:  692 GNTDQDGQERSQAYFVIKAAQRREELQRQGDDLDDKIRVAEKEVRALTKTLAHLEGRNTEYRKSFHRADMVGEEAVKMNQLEDQVKTAEDTLFKRKKELQRLEMEME--------AEQHRIAELETQARHFKDHNENLHAAQTQVLKELDAEKDKGLKATKRLDRLVRDHRTARGVPDGEKSIEEHVLDLCHAKELNHSLLYTLGQLAQEFPELSDPLHEGVKAHNLHIP 913          
BLAST of mRNA_M-pyrifera_M_contig96673.22263.1 vs. uniprot
Match: A0A3R7AD39_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7AD39_9STRA)

HSP 1 Score: 109 bits (273), Expect = 7.730e-24
Identity = 82/219 (37.44%), Postives = 131/219 (59.82%), Query Frame = 1
Query:   40 EGGARPSQAYFVIKAAQKREELQRKGDELNAAVLHAEREIRALLATLSQVKKRNAVYRESFRRADG-GREGKAVTSLKAKAEEATDAVFRRKRELRRVAADTERALAQTEEARQQRAALESHVASLKESAERVQRERERQAAMLRAHEEQSQRLRSAVRRAAATGDEEELCLEERAIRVQSLRTNSHVVLYTLGQLAAEYPELAEPLRTAAQANALKIP 693
            E G   SQAYFVIKAAQ+REELQR+GDEL+  +  AE+E+RAL  TL  ++ RN  YR+SF RAD  G E   +  L+ + + A D +F+RK+E++R+  + E    + +E   Q    + H  +L  +  +V +E + +   +    + ++R+   VR   +  D   + +EE A+   + +  ++ +LYTLGQLA E+PEL++ L+T+ +A  L IP
Sbjct:  700 EDGQERSQAYFVIKAAQRREELQREGDELDDKIRVAEKEVRALTKTLQHLEGRNTEYRKSFHRADMVGEEAAKMNQLEDQVKAAEDTLFKRKKEMQRLQMEIESEHNRIQEMEIQHRHFKEHNENLTAAHTQVMKELDLEKEKV---NKVTKRMDKLVRDYRSKRDVASVTIEEVALDAHTAKEINNGLLYTLGQLAHEFPELSDVLQTSVKALNLHIP 915          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig96673.22263.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DTA8_CAFRO1.620e-3241.04Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A6T6VX58_9STRA2.060e-3242.11Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S4D4Q2_HETAK2.490e-3143.40Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J2SE05_9STRA4.680e-2742.66Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
H3H5S2_PHYRM1.050e-2536.44Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]
A0A3R7FY08_9STRA1.420e-2538.30Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A7S2B6P8_9STRA2.130e-2436.28Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A067CMC9_SAPPC3.000e-2438.43Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9YGC4_9STRA5.550e-2438.70Flagella associated protein n=1 Tax=Achlya hypogyn... [more]
A0A3R7AD39_9STRA7.730e-2437.44Uncharacterized protein n=3 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig96673contigM-pyrifera_M_contig96673:21..713 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score120.6
Seed ortholog evalue1e-24
Seed eggNOG ortholog164328.Phyra86001
Preferred nameCCDC39
KEGG koko:K13675
KEGG ReactionR09316
KEGG Pathwayko00514,map00514
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0001539,GO:0001578,GO:0001889,GO:0001947,GO:0002009,GO:0003007,GO:0003143,GO:0003341,GO:0003351,GO:0003352,GO:0003356,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007275,GO:0007368,GO:0007389,GO:0007507,GO:0008150,GO:0009653,GO:0009790,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0030317,GO:0030323,GO:0030324,GO:0031016,GO:0032501,GO:0032502,GO:0032838,GO:0032879,GO:0032886,GO:0034622,GO:0035050,GO:0035082,GO:0035239,GO:0035295,GO:0035469,GO:0036159,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044458,GO:0044463,GO:0044464,GO:0044782,GO:0048513,GO:0048562,GO:0048565,GO:0048568,GO:0048598,GO:0048729,GO:0048731,GO:0048732,GO:0048856,GO:0048870,GO:0050789,GO:0050794,GO:0051179,GO:0051270,GO:0051674,GO:0055123,GO:0060271,GO:0060285,GO:0060287,GO:0060429,GO:0060541,GO:0060562,GO:0060632,GO:0061008,GO:0061371,GO:0065003,GO:0065007,GO:0070286,GO:0070925,GO:0071840,GO:0071907,GO:0071910,GO:0072359,GO:0097014,GO:0097722,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038
EggNOG free text desc.inner dynein arm assembly
EggNOG OGs2C32D@1,2QS0D@2759,3QDY5@4776
COG Functional cat.S
CAZyGT31
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003
Exons1
Model size693
Cds size693
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816881.596372-CDS-M-pyrifera_M_contig96673:20..7131622816881.596372-CDS-M-pyrifera_M_contig96673:20..713Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig96673 21..713 +
1692278233.7971413-CDS-M-pyrifera_M_contig96673:20..7131692278233.7971413-CDS-M-pyrifera_M_contig96673:20..713Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig96673 21..713 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig96673.22263.1prot_M-pyrifera_M_contig96673.22263.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig96673 21..713 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig96673.22263.1

>prot_M-pyrifera_M_contig96673.22263.1 ID=prot_M-pyrifera_M_contig96673.22263.1|Name=mRNA_M-pyrifera_M_contig96673.22263.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=231bp
MRLPDSDDEGESKEGGARPSQAYFVIKAAQKREELQRKGDELNAAVLHAE
REIRALLATLSQVKKRNAVYRESFRRADGGREGKAVTSLKAKAEEATDAV
FRRKRELRRVAADTERALAQTEEARQQRAALESHVASLKESAERVQRERE
RQAAMLRAHEEQSQRLRSAVRRAAATGDEEELCLEERAIRVQSLRTNSHV
VLYTLGQLAAEYPELAEPLRTAAQANALKIP
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mRNA from alignment at M-pyrifera_M_contig96673:21..713+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig96673.22263.1 ID=mRNA_M-pyrifera_M_contig96673.22263.1|Name=mRNA_M-pyrifera_M_contig96673.22263.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=693bp|location=Sequence derived from alignment at M-pyrifera_M_contig96673:21..713+ (Macrocystis pyrifera P11B4 male)
ATGCGTTTGCCCGATTCTGACGACGAAGGCGAGTCGAAAGAGGGCGGTGC TCGGCCTTCGCAGGCCTACTTTGTGATCAAGGCGGCCCAGAAGCGCGAGG AGCTGCAGAGGAAAGGAGACGAGTTGAATGCCGCAGTGTTGCATGCCGAG CGAGAAATTCGAGCGCTGCTGGCCACTCTGTCCCAAGTCAAAAAACGCAA CGCAGTCTATCGTGAGTCGTTTCGTCGCGCAGACGGCGGTAGAGAAGGAA AAGCGGTGACGTCACTCAAGGCCAAAGCCGAAGAAGCAACGGATGCTGTG TTTCGACGTAAGAGAGAACTGAGGCGTGTTGCGGCCGATACGGAGAGAGC ATTGGCGCAGACCGAAGAGGCCAGACAGCAACGGGCGGCGTTGGAAAGCC ACGTAGCTTCGCTGAAAGAGAGTGCGGAACGGGTGCAGCGGGAGAGGGAG AGACAGGCGGCAATGCTTCGAGCGCACGAAGAGCAGAGCCAACGGTTGCG AAGCGCTGTGCGACGAGCAGCCGCCACTGGAGATGAAGAAGAGCTGTGTC TCGAAGAACGGGCGATCCGAGTGCAATCTCTGCGCACAAACAGCCACGTG GTGCTCTACACGCTCGGACAGCTCGCAGCAGAATACCCAGAACTCGCAGA GCCACTCAGAACAGCGGCACAAGCAAATGCCCTAAAAATCCCA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig96673:21..713+

>mRNA_M-pyrifera_M_contig96673.22263.1 ID=mRNA_M-pyrifera_M_contig96673.22263.1|Name=mRNA_M-pyrifera_M_contig96673.22263.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1386bp|location=Sequence derived from alignment at M-pyrifera_M_contig96673:21..713+ (Macrocystis pyrifera P11B4 male)
ATGCGTTTGCCCGATTCTGACGACGAAGGCGAGTCGAAAGAGGGCGGTGC
TCGGCCTTCGCAGGCCTACTTTGTGATCAAGGCGGCCCAGAAGCGCGAGG
AGCTGCAGAGGAAAGGAGACGAGTTGAATGCCGCAGTGTTGCATGCCGAG
CGAGAAATTCGAGCGCTGCTGGCCACTCTGTCCCAAGTCAAAAAACGCAA
CGCAGTCTATCGTGAGTCGTTTCGTCGCGCAGACGGCGGTAGAGAAGGAA
AAGCGGTGACGTCACTCAAGGCCAAAGCCGAAGAAGCAACGGATGCTGTG
TTTCGACGTAAGAGAGAACTGAGGCGTGTTGCGGCCGATACGGAGAGAGC
ATTGGCGCAGACCGAAGAGGCCAGACAGCAACGGGCGGCGTTGGAAAGCC
ACGTAGCTTCGCTGAAAGAGAGTGCGGAACGGGTGCAGCGGGAGAGGGAG
AGACAGGCGGCAATGCTTCGAGCGCACGAAGAGCAGAGCCAACGGTTGCG
AAGCGCTGTGCGACGAGCAGCCGCCACTGGAGATGAAGAAGAGCTGTGTC
TCGAAGAACGGGCGATCCGAGTGCAATCTCTGCGCACAAACAGCCACGTG
GTGCTCTACACGCTCGGACAGCTCGCAGCAGAATACCCAGAACTCGCAGA
GCCACTCAGAACAGCGGCACAAGCAAATGCCCTAAAAATCCCAATGCGTT
TGCCCGATTCTGACGACGAAGGCGAGTCGAAAGAGGGCGGTGCTCGGCCT
TCGCAGGCCTACTTTGTGATCAAGGCGGCCCAGAAGCGCGAGGAGCTGCA
GAGGAAAGGAGACGAGTTGAATGCCGCAGTGTTGCATGCCGAGCGAGAAA
TTCGAGCGCTGCTGGCCACTCTGTCCCAAGTCAAAAAACGCAACGCAGTC
TATCGTGAGTCGTTTCGTCGCGCAGACGGCGGTAGAGAAGGAAAAGCGGT
GACGTCACTCAAGGCCAAAGCCGAAGAAGCAACGGATGCTGTGTTTCGAC
GTAAGAGAGAACTGAGGCGTGTTGCGGCCGATACGGAGAGAGCATTGGCG
CAGACCGAAGAGGCCAGACAGCAACGGGCGGCGTTGGAAAGCCACGTAGC
TTCGCTGAAAGAGAGTGCGGAACGGGTGCAGCGGGAGAGGGAGAGACAGG
CGGCAATGCTTCGAGCGCACGAAGAGCAGAGCCAACGGTTGCGAAGCGCT
GTGCGACGAGCAGCCGCCACTGGAGATGAAGAAGAGCTGTGTCTCGAAGA
ACGGGCGATCCGAGTGCAATCTCTGCGCACAAACAGCCACGTGGTGCTCT
ACACGCTCGGACAGCTCGCAGCAGAATACCCAGAACTCGCAGAGCCACTC
AGAACAGCGGCACAAGCAAATGCCCTAAAAATCCCA
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