mRNA_M-pyrifera_M_contig95938.22117.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig95938.22117.1
Unique NamemRNA_M-pyrifera_M_contig95938.22117.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig95938.22117.1 vs. uniprot
Match: A0A3S1B4U7_ELYCH (Nucleoside diphosphate kinase n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1B4U7_ELYCH)

HSP 1 Score: 152 bits (384), Expect = 3.410e-45
Identity = 66/100 (66.00%), Postives = 81/100 (81.00%), Query Frame = 1 
Query:    1 QDLKDKPFFGGLVEYMTSGPVFAMVWEGEGVIAGGRKLLGATKPSDSAPGTLRGDYCIDVGRNLVHGSDGLESSAKEQALWFNESEICSYTSADEAWVYE 300
            +DL DKPF+ GLV YM SGPVFAMVWEG+ V+A GRK+LGAT P DSAPGT+RGDYCIDVGRN+ HGSD +E++ +E ALWF + E+  Y  AD+ W+YE
Sbjct:   70 KDLADKPFYNGLVAYMASGPVFAMVWEGKAVVATGRKILGATNPLDSAPGTIRGDYCIDVGRNICHGSDAVETAQREIALWFKDDELNDYEFADKKWIYE 169
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BLAST of mRNA_M-pyrifera_M_contig95938.22117.1 vs. uniprot
Match: A0A6A6VYF2_9PEZI (Nucleoside diphosphate kinase n=1 Tax=Pseudovirgaria hyperparasitica TaxID=470096 RepID=A0A6A6VYF2_9PEZI)

HSP 1 Score: 152 bits (383), Expect = 8.320e-45
Identity = 67/99 (67.68%), Postives = 82/99 (82.83%), Query Frame = 1 
Query:    4 DLKDKPFFGGLVEYMTSGPVFAMVWEGEGVIAGGRKLLGATKPSDSAPGTLRGDYCIDVGRNLVHGSDGLESSAKEQALWFNESEICSYTSADEAWVYE 300
            DL DKPFFGGLV YM SG + AMVWEG  V+  GR +LGATKPS+S+PGT+RGDYCIDVGRN+ HGSD +ES+ KE ALWF++SEI S+ SA ++W+YE
Sbjct:   86 DLSDKPFFGGLVSYMASGAICAMVWEGRDVVKTGRAILGATKPSESSPGTIRGDYCIDVGRNVCHGSDAVESAQKEIALWFDKSEITSWKSAQQSWIYE 184
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BLAST of mRNA_M-pyrifera_M_contig95938.22117.1 vs. uniprot
Match: UPI001B88DD03 (nucleoside diphosphate kinase-like isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88DD03)

HSP 1 Score: 150 bits (380), Expect = 1.420e-44
Identity = 67/99 (67.68%), Postives = 78/99 (78.79%), Query Frame = 1 
Query:    4 DLKDKPFFGGLVEYMTSGPVFAMVWEGEGVIAGGRKLLGATKPSDSAPGTLRGDYCIDVGRNLVHGSDGLESSAKEQALWFNESEICSYTSADEAWVYE 300
            DL  KPFF GLV YM SGPVFAMVWEG  V+A GRKLLGATKP DSAPGT+RGD+CIDVGRN+ HGSD +ES+ KE  LWF   E+  + S +++WVYE
Sbjct:   72 DLSSKPFFDGLVNYMNSGPVFAMVWEGRNVVAMGRKLLGATKPDDSAPGTIRGDFCIDVGRNICHGSDAVESAKKEIDLWFGPKEVIEWESCEKSWVYE 170
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BLAST of mRNA_M-pyrifera_M_contig95938.22117.1 vs. uniprot
Match: L1JM45_GUITC (Nucleoside diphosphate kinase (Fragment) n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1JM45_GUITC)

HSP 1 Score: 148 bits (373), Expect = 9.540e-44
Identity = 66/99 (66.67%), Postives = 78/99 (78.79%), Query Frame = 1 
Query:    4 DLKDKPFFGGLVEYMTSGPVFAMVWEGEGVIAGGRKLLGATKPSDSAPGTLRGDYCIDVGRNLVHGSDGLESSAKEQALWFNESEICSYTSADEAWVYE 300
            DL  KPFF GLVEYM SGPV  MVWEG+GV+  GR LLGATKPS+SAPG++RGD+CIDVGRN+ HGSD +ES+ KE ALWF   E+  + S  E+WVYE
Sbjct:   53 DLSSKPFFAGLVEYMKSGPVVPMVWEGDGVVKAGRTLLGATKPSESAPGSIRGDFCIDVGRNICHGSDAVESANKEIALWFKPEELVDWKSHSESWVYE 151
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BLAST of mRNA_M-pyrifera_M_contig95938.22117.1 vs. uniprot
Match: UPI001EE5F744 (LOW QUALITY PROTEIN: nucleoside diphosphate kinase A-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5F744)

HSP 1 Score: 148 bits (373), Expect = 1.550e-43
Identity = 65/99 (65.66%), Postives = 77/99 (77.78%), Query Frame = 1 
Query:    4 DLKDKPFFGGLVEYMTSGPVFAMVWEGEGVIAGGRKLLGATKPSDSAPGTLRGDYCIDVGRNLVHGSDGLESSAKEQALWFNESEICSYTSADEAWVYE 300
            DL  KPFF GLV+YM SGPV AMVWEG+ V+  GRK+LGAT P DS PGT+RGD+CIDVGRN+ HGSD +ES+ KE  LWF+ SE+C Y S   +WVYE
Sbjct:   70 DLSSKPFFAGLVKYMASGPVVAMVWEGKHVVKMGRKMLGATNPIDSEPGTIRGDFCIDVGRNICHGSDSVESAIKEIGLWFSPSELCDYNSCQASWVYE 168
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BLAST of mRNA_M-pyrifera_M_contig95938.22117.1 vs. uniprot
Match: A0A7S0PAX4_CAFRO (Nucleoside diphosphate kinase n=4 Tax=Sar TaxID=2698737 RepID=A0A7S0PAX4_CAFRO)

HSP 1 Score: 147 bits (372), Expect = 1.730e-43
Identity = 69/99 (69.70%), Postives = 81/99 (81.82%), Query Frame = 1 
Query:    4 DLKDKPFFGGLVEYMTSGPVFAMVWEGEGVIAGGRKLLGATKPSDSAPGTLRGDYCIDVGRNLVHGSDGLESSAKEQALWFNESEICSYTSADEAWVYE 300
            DLKDK FF GL++YMTSGPV AMVW G+GV+AGGR LLGATKPS+SAPGT+RGD CIDVGRN+ HGSD +ES+ KE A WF E  +  +TS  E+WVYE
Sbjct:   62 DLKDKKFFPGLIKYMTSGPVVAMVWVGDGVVAGGRVLLGATKPSESAPGTIRGDLCIDVGRNVCHGSDAVESAEKEIAHWFPEG-VAEWTSHSESWVYE 159
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BLAST of mRNA_M-pyrifera_M_contig95938.22117.1 vs. uniprot
Match: A0A1D3D9Q5_9EIME (Nucleoside diphosphate kinase n=1 Tax=Cyclospora cayetanensis TaxID=88456 RepID=A0A1D3D9Q5_9EIME)

HSP 1 Score: 147 bits (370), Expect = 2.810e-43
Identity = 65/99 (65.66%), Postives = 78/99 (78.79%), Query Frame = 1 
Query:    4 DLKDKPFFGGLVEYMTSGPVFAMVWEGEGVIAGGRKLLGATKPSDSAPGTLRGDYCIDVGRNLVHGSDGLESSAKEQALWFNESEICSYTSADEAWVYE 300
            DLK KPFF GLV YM SGPV  MVW+G  V+  GRKLLG T+P +S PGTLRGD+CIDVGRN+VHGSD +ES+ KE ALWF++ EIC +T A  +W+YE
Sbjct:   55 DLKGKPFFPGLVNYMASGPVVCMVWKGTDVVKQGRKLLGETRPLESNPGTLRGDFCIDVGRNIVHGSDSVESAEKEIALWFSQDEICEWTPAGNSWIYE 153
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BLAST of mRNA_M-pyrifera_M_contig95938.22117.1 vs. uniprot
Match: B9Q287_TOXGV (Nucleoside diphosphate kinase n=17 Tax=Sarcocystidae TaxID=5809 RepID=B9Q287_TOXGV)

HSP 1 Score: 147 bits (370), Expect = 2.990e-43
Identity = 65/99 (65.66%), Postives = 77/99 (77.78%), Query Frame = 1 
Query:    4 DLKDKPFFGGLVEYMTSGPVFAMVWEGEGVIAGGRKLLGATKPSDSAPGTLRGDYCIDVGRNLVHGSDGLESSAKEQALWFNESEICSYTSADEAWVYE 300
            DLK KPFF GL+ YMTSGPV  MVWEG  V+  GR++LG T+P +S PGTLRGD+CIDVGRN+VHGSD +ES+ KE +LWF   EIC +TSA   WVYE
Sbjct:   56 DLKGKPFFPGLISYMTSGPVVCMVWEGTDVVKQGRRMLGETRPLESNPGTLRGDFCIDVGRNIVHGSDSVESANKEISLWFTPEEICEWTSAQHKWVYE 154
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BLAST of mRNA_M-pyrifera_M_contig95938.22117.1 vs. uniprot
Match: A0A2Y9SBB6_PHYMC (Nucleoside diphosphate kinase n=1 Tax=Physeter macrocephalus TaxID=9755 RepID=A0A2Y9SBB6_PHYMC)

HSP 1 Score: 145 bits (367), Expect = 8.290e-43
Identity = 66/99 (66.67%), Postives = 75/99 (75.76%), Query Frame = 1 
Query:    4 DLKDKPFFGGLVEYMTSGPVFAMVWEGEGVIAGGRKLLGATKPSDSAPGTLRGDYCIDVGRNLVHGSDGLESSAKEQALWFNESEICSYTSADEAWVYE 300
            DLK KPFF GLV YMTSGPV  MVWEG  V+  GRK+LG T+P DSAPGTLRGD+CI+VGRNLVHGSD +ES+ KE  LWF   EIC +  A   W+YE
Sbjct:   56 DLKGKPFFPGLVAYMTSGPVVCMVWEGTDVVRQGRKMLGETRPLDSAPGTLRGDFCIEVGRNLVHGSDSVESALKEIILWFTPEEICDWKPAQGGWIYE 154
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BLAST of mRNA_M-pyrifera_M_contig95938.22117.1 vs. uniprot
Match: A0A6M2DVW6_9NEOP (Nucleoside diphosphate kinase n=5 Tax=Endopterygota TaxID=33392 RepID=A0A6M2DVW6_9NEOP)

HSP 1 Score: 145 bits (367), Expect = 1.270e-42
Identity = 64/99 (64.65%), Postives = 81/99 (81.82%), Query Frame = 1 
Query:    4 DLKDKPFFGGLVEYMTSGPVFAMVWEGEGVIAGGRKLLGATKPSDSAPGTLRGDYCIDVGRNLVHGSDGLESSAKEQALWFNESEICSYTSADEAWVYE 300
            DL  +PFF GLV+YM+SGPV  MVWEG  V+  GR +LGAT P+DSAPGT+RGD CI+VGRN++HGSDG+ES+ KE +LWF E E+ S+T A+E+WVYE
Sbjct:   70 DLSARPFFPGLVKYMSSGPVVPMVWEGTNVVKTGRVMLGATNPADSAPGTIRGDLCIEVGRNILHGSDGVESAKKEISLWFTEKEVISWTPANESWVYE 168
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95938.22117.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3S1B4U7_ELYCH3.410e-4566.00Nucleoside diphosphate kinase n=1 Tax=Elysia chlor... [more]
A0A6A6VYF2_9PEZI8.320e-4567.68Nucleoside diphosphate kinase n=1 Tax=Pseudovirgar... [more]
UPI001B88DD031.420e-4467.68nucleoside diphosphate kinase-like isoform X1 n=2 ... [more]
L1JM45_GUITC9.540e-4466.67Nucleoside diphosphate kinase (Fragment) n=2 Tax=G... [more]
UPI001EE5F7441.550e-4365.66LOW QUALITY PROTEIN: nucleoside diphosphate kinase... [more]
A0A7S0PAX4_CAFRO1.730e-4369.70Nucleoside diphosphate kinase n=4 Tax=Sar TaxID=26... [more]
A0A1D3D9Q5_9EIME2.810e-4365.66Nucleoside diphosphate kinase n=1 Tax=Cyclospora c... [more]
B9Q287_TOXGV2.990e-4365.66Nucleoside diphosphate kinase n=17 Tax=Sarcocystid... [more]
A0A2Y9SBB6_PHYMC8.290e-4366.67Nucleoside diphosphate kinase n=1 Tax=Physeter mac... [more]
A0A6M2DVW6_9NEOP1.270e-4264.65Nucleoside diphosphate kinase n=5 Tax=Endopterygot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig95938contigM-pyrifera_M_contig95938:58..360 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score148.7
Seed ortholog evalue1.5e-33
Seed eggNOG ortholog55529.EKX49482
Preferred nameNME3
KEGG rclassRC00002
KEGG koko:K00940
KEGG ReactionR00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895
KEGG Pathwayko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016
KEGG ModuleM00049,M00050,M00052,M00053
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000278,GO:0000287,GO:0000976,GO:0000977,GO:0001012,GO:0001067,GO:0001101,GO:0001667,GO:0001678,GO:0001726,GO:0001775,GO:0001882,GO:0001883,GO:0002009,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002682,GO:0002683,GO:0002761,GO:0002762,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003700,GO:0003824,GO:0004518,GO:0004536,GO:0004550,GO:0004672,GO:0004674,GO:0005488,GO:0005504,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005758,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005874,GO:0005880,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006183,GO:0006213,GO:0006220,GO:0006221,GO:0006228,GO:0006241,GO:0006259,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006915,GO:0006928,GO:0006950,GO:0006955,GO:0006974,GO:0006979,GO:0007017,GO:0007049,GO:0007154,GO:0007155,GO:0007163,GO:0007165,GO:0007166,GO:0007186,GO:0007187,GO:0007188,GO:0007189,GO:0007229,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007424,GO:0007427,GO:0007589,GO:0007595,GO:0008017,GO:0008092,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0008284,GO:0008285,GO:0008289,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009132,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009147,GO:0009148,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009653,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009888,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010631,GO:0010720,GO:0010941,GO:0010975,GO:0010976,GO:0012501,GO:0012505,GO:0014070,GO:0014074,GO:0014075,GO:0015630,GO:0015631,GO:0015949,GO:0016020,GO:0016043,GO:0016192,GO:0016301,GO:0016310,GO:0016333,GO:0016334,GO:0016477,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0016787,GO:0016788,GO:0017076,GO:0018105,GO:0018130,GO:0018193,GO:0018209,GO:0019001,GO:0019205,GO:0019215,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019725,GO:0019867,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0019933,GO:0019935,GO:0021537,GO:0021543,GO:0021761,GO:0021766,GO:0022008,GO:0022607,GO:0022610,GO:0023052,GO:0030027,GO:0030141,GO:0030154,GO:0030554,GO:0030856,GO:0030858,GO:0030879,GO:0030900,GO:0031090,GO:0031252,GO:0031253,GO:0031256,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031344,GO:0031346,GO:0031406,GO:0031410,GO:0031966,GO:0031967,GO:0031968,GO:0031970,GO:0031974,GO:0031975,GO:0031982,GO:0031983,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0032587,GO:0032940,GO:0033293,GO:0033500,GO:0033554,GO:0033574,GO:0033993,GO:0034284,GO:0034330,GO:0034332,GO:0034404,GO:0034599,GO:0034641,GO:0034654,GO:0034774,GO:0035152,GO:0035556,GO:0035639,GO:0035690,GO:0036094,GO:0036211,GO:0036230,GO:0040011,GO:0042119,GO:0042127,GO:0042221,GO:0042278,GO:0042451,GO:0042455,GO:0042493,GO:0042592,GO:0042593,GO:0042802,GO:0042981,GO:0042995,GO:0043015,GO:0043021,GO:0043024,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043299,GO:0043312,GO:0043388,GO:0043412,GO:0043434,GO:0043565,GO:0043933,GO:0044085,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0044877,GO:0045055,GO:0045216,GO:0045321,GO:0045595,GO:0045596,GO:0045597,GO:0045604,GO:0045606,GO:0045616,GO:0045618,GO:0045637,GO:0045638,GO:0045664,GO:0045666,GO:0045682,GO:0045684,GO:0045893,GO:0045935,GO:0045944,GO:0046036,GO:0046039,GO:0046051,GO:0046128,GO:0046129,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046683,GO:0046777,GO:0046872,GO:0046903,GO:0046939,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048699,GO:0048729,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048870,GO:0048878,GO:0050678,GO:0050679,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050878,GO:0050896,GO:0051093,GO:0051094,GO:0051098,GO:0051099,GO:0051101,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051252,GO:0051254,GO:0051259,GO:0051591,GO:0051674,GO:0051716,GO:0051960,GO:0051962,GO:0055082,GO:0055086,GO:0060205,GO:0060255,GO:0060284,GO:0060322,GO:0060416,GO:0060429,GO:0060541,GO:0060548,GO:0061508,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070542,GO:0070887,GO:0071229,GO:0071310,GO:0071322,GO:0071326,GO:0071331,GO:0071333,GO:0071396,GO:0071398,GO:0071704,GO:0071840,GO:0071944,GO:0072521,GO:0072522,GO:0072527,GO:0072528,GO:0080090,GO:0090130,GO:0090132,GO:0090304,GO:0090305,GO:0090407,GO:0097159,GO:0097367,GO:0097708,GO:0098588,GO:0098590,GO:0098805,GO:0099080,GO:0099081,GO:0099503,GO:0099512,GO:0099513,GO:0101002,GO:0120025,GO:0120035,GO:0120038,GO:0140096,GO:0140097,GO:0140110,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901652,GO:1901654,GO:1901657,GO:1901659,GO:1901698,GO:1901700,GO:1901701,GO:1902105,GO:1902106,GO:1902680,GO:1903506,GO:1903508,GO:1903706,GO:1903707,GO:1904813,GO:1990837,GO:2000026,GO:2000112,GO:2001141
EggNOG free text desc.Nucleoside diphosphate kinase
EggNOG OGsCOG0105@1,KOG0888@2759
EC2.7.4.6
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Exons1
Model size303
Cds size303
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816874.4048295-CDS-M-pyrifera_M_contig95938:57..3601622816874.4048295-CDS-M-pyrifera_M_contig95938:57..360Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig95938 58..360 +
1692278229.5201328-CDS-M-pyrifera_M_contig95938:57..3601692278229.5201328-CDS-M-pyrifera_M_contig95938:57..360Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig95938 58..360 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig95938.22117.1prot_M-pyrifera_M_contig95938.22117.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig95938 58..360 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig95938.22117.1

>prot_M-pyrifera_M_contig95938.22117.1 ID=prot_M-pyrifera_M_contig95938.22117.1|Name=mRNA_M-pyrifera_M_contig95938.22117.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=101bp
QDLKDKPFFGGLVEYMTSGPVFAMVWEGEGVIAGGRKLLGATKPSDSAPG
TLRGDYCIDVGRNLVHGSDGLESSAKEQALWFNESEICSYTSADEAWVYE
*
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mRNA from alignment at M-pyrifera_M_contig95938:58..360+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig95938.22117.1 ID=mRNA_M-pyrifera_M_contig95938.22117.1|Name=mRNA_M-pyrifera_M_contig95938.22117.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=303bp|location=Sequence derived from alignment at M-pyrifera_M_contig95938:58..360+ (Macrocystis pyrifera P11B4 male)
CAGGACCTCAAAGACAAGCCATTCTTCGGTGGACTCGTCGAATACATGAC
CTCTGGCCCAGTTTTCGCCATGGTTTGGGAAGGTGAGGGCGTCATTGCTG
GCGGCCGCAAGCTTCTCGGAGCCACCAAGCCAAGTGACAGCGCACCAGGT
ACCCTCCGTGGTGACTACTGCATCGATGTGGGCCGCAACTTGGTCCATGG
ATCTGATGGCCTTGAGAGCTCTGCCAAGGAGCAAGCTCTTTGGTTCAACG
AGTCTGAAATCTGCAGTTACACTTCCGCAGATGAAGCATGGGTGTACGAG
TAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig95938:58..360+

>mRNA_M-pyrifera_M_contig95938.22117.1 ID=mRNA_M-pyrifera_M_contig95938.22117.1|Name=mRNA_M-pyrifera_M_contig95938.22117.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=606bp|location=Sequence derived from alignment at M-pyrifera_M_contig95938:58..360+ (Macrocystis pyrifera P11B4 male)
CAGGACCTCAAAGACAAGCCATTCTTCGGTGGACTCGTCGAATACATGAC
CTCTGGCCCAGTTTTCGCCATGGTTTGGGAAGGTGAGGGCGTCATTGCTG
GCGGCCGCAAGCTTCTCGGAGCCACCAAGCCAAGTGACAGCGCACCAGGT
ACCCTCCGTGGTGACTACTGCATCGATGTGGGCCGCAACTTGGTCCATGG
ATCTGATGGCCTTGAGAGCTCTGCCAAGGAGCAAGCTCTTTGGTTCAACG
AGTCTGAAATCTGCAGTTACACTTCCGCAGATGAAGCATGGGTGTACGAG
TAACAGGACCTCAAAGACAAGCCATTCTTCGGTGGACTCGTCGAATACAT
GACCTCTGGCCCAGTTTTCGCCATGGTTTGGGAAGGTGAGGGCGTCATTG
CTGGCGGCCGCAAGCTTCTCGGAGCCACCAAGCCAAGTGACAGCGCACCA
GGTACCCTCCGTGGTGACTACTGCATCGATGTGGGCCGCAACTTGGTCCA
TGGATCTGATGGCCTTGAGAGCTCTGCCAAGGAGCAAGCTCTTTGGTTCA
ACGAGTCTGAAATCTGCAGTTACACTTCCGCAGATGAAGCATGGGTGTAC
GAGTAA
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