mRNA_M-pyrifera_M_contig95596.22039.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig95596.22039.1
Unique NamemRNA_M-pyrifera_M_contig95596.22039.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig95596.22039.1 vs. uniprot
Match: A0A1X2GGT8_9FUNG (U3 small nucleolar RNA-associated protein 10 n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GGT8_9FUNG)

HSP 1 Score: 142 bits (357), Expect = 6.190e-35
Identity = 89/251 (35.46%), Postives = 146/251 (58.17%), Query Frame = 1
Query:    1 EKENEVLAEFVNATVVVQCIRVSKSPQIHNKALLFLSSMASVFPEQVLENVMPVFTVMGATTMAQDDNYSFQVIQKIVQTIVP---RIRHRKGSEA------LLPLMRIFSDALHRVPSHRRLLLFTVFMSSLSSQQYHCP-LAMLLAKSTQQTTGTLPSGAETDVLGFCLALCHRLPAAAVVEAFTRLINALNSLAAEPESD-------GVVALQKHMPVRVRNQPRLQAAALALVERFLTSREFVAQVL 702
            E+  ++    +   VVVQCIRV+ +PQ HN+ALL ++++ASVFPE+VL N+MPVFT MGA  M  DDNYSFQVIQ+ ++ ++P    +R  + ++A      + P++++F DAL  +P HRRL LFTV +S+L   ++    +A LL K T++ +    S A+T +  F L +C +      ++A   L   L  L  + + D        V  +  H   ++R   + +   + L+ ++L+SR F+A+V+
Sbjct: 1230 EEAAKIDESTLRVDVVVQCIRVTGNPQTHNQALLLMATIASVFPERVLHNIMPVFTFMGANVMRLDDNYSFQVIQQTLEKVIPPLVAVRRLETTDATALSLHVKPIIKVFVDALFHIPKHRRLRLFTVLVSTLGQDEFLATVMAQLLEKFTEKKSKGDRSDADT-LFEFALVVCQQFGVTTQLKAMLSLFQGLLHLPNDKDDDMQDDNDSSVFNVADHSSKQLR---QYKLVTMNLIHQWLSSRHFLAKVM 1476          
BLAST of mRNA_M-pyrifera_M_contig95596.22039.1 vs. uniprot
Match: A0A4P9Z677_9FUNG (U3 small nucleolar RNA-associated protein 10 n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z677_9FUNG)

HSP 1 Score: 138 bits (348), Expect = 9.410e-34
Identity = 78/180 (43.33%), Postives = 115/180 (63.89%), Query Frame = 1
Query:   22 AEFVNATVVVQCIRVSKSPQIHNKALLFLSSMASVFPEQVLENVMPVFTVMGATTMAQDDNYSFQVIQKIVQTIVPRIRHRKGSEALLPLMRIFSDALHRVPSHRRLLLFTVFMSSLSSQQ-YHCPLAMLLAKSTQQTTGTLPSGAETDVL-GFCLALCHRLPAAAVVEAFTRLINALNS 555
            A  V   +VVQC+R + +PQIH +ALL L+S+ASV P+ VL+N+MPVFT MGA+ + QDDNYSF +IQ+ ++ I+P +      + +  LM IF DAL  +P HRRL LFTV +++L ++   H  L +LL K  ++ +    S  +TD L  FCL L  +  AA  ++   +L+ ALN+
Sbjct: 1175 ASRVRVDLVVQCLRSTSNPQIHGQALLLLASLASVQPDLVLQNIMPVFTFMGASVLRQDDNYSFHIIQQTLERIIPPLLSTHSEQNMRGLMGIFVDALFHIPRHRRLPLFTVLVNTLGAEHSLHQVLLLLLVKYAERMS---KSTEDTDTLMAFCLHLSEQCSAATQLKMLHQLVTALNT 1351          
BLAST of mRNA_M-pyrifera_M_contig95596.22039.1 vs. uniprot
Match: A0A1C7NG14_9FUNG (U3 small nucleolar RNA-associated protein 10 (Fragment) n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NG14_9FUNG)

HSP 1 Score: 137 bits (344), Expect = 3.360e-33
Identity = 88/251 (35.06%), Postives = 139/251 (55.38%), Query Frame = 1
Query:    1 EKENEVLAEFVNATVVVQCIRVSKSPQIHNKALLFLSSMASVFPEQVLENVMPVFTVMGATTMAQDDNYSFQVIQKIVQTIVPRI-----RHRKGSEALL-----PLMRIFSDALHRVPSHRRLLLFTVFMSSLSSQQY-HCPLAMLLAKSTQQTTGTLPSGAETDVLGFCLALCHRLPAAAVVEAFTRLINALNSLAAEPESDGVVALQKHMPV------RVRNQPRLQAAALALVERFLTSREFVAQVL 702
            EK   V    +   +VVQCIR++ +PQ HN+ALL ++++AS+FPE VL N+MPVFT MGA  + QDDNYSFQVIQ+ ++ I+P +     +     EA L     P++++F DAL  +P HRRL LFTV + +L   ++ +  +++LL K T++      S AE+ +  F L +C        + A   L+N L  L  E   D  +   K + +        +   + + A L  + + LTS+ F+ +V+
Sbjct: 1105 EKGATVEESDLRVDIVVQCIRITGNPQTHNQALLLMATIASMFPECVLHNIMPVFTFMGANVLRQDDNYSFQVIQQTLEKILPPLVVSSRKSNNDDEAALVLEVKPIIKVFVDALFHIPKHRRLRLFTVLIQTLGENEFLYAIISLLLEKLTERLAKGARSEAES-LTEFSLVICQHFNPETQMNAVLALLNGLLVLPNEKPEDQEMTSTKDVHLFNVSEHSAKQLRQYKLATLNFIGQLLTSKGFLNKVM 1354          
BLAST of mRNA_M-pyrifera_M_contig95596.22039.1 vs. uniprot
Match: A0A8H7SGA3_9FUNG (U3 small nucleolar RNA-associated protein 10 n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SGA3_9FUNG)

HSP 1 Score: 136 bits (343), Expect = 4.600e-33
Identity = 90/248 (36.29%), Postives = 141/248 (56.85%), Query Frame = 1
Query:    1 EKENEVLAEFVNATVVVQCIRVSKSPQIHNKALLFLSSMASVFPEQVLENVMPVFTVMGATTMAQDDNYSFQVIQKIVQTIVPR--IRHRKGSE----ALL----PLMRIFSDALHRVPSHRRLLLFTVFMSSLSSQQY-HCPLAMLLAKSTQQTTGTLPSGAETDVLGFCLALCHRLPAAAVVEAFTRLINALNSLAAEPESDGVVALQKHMPVRVRNQPRLQA---AALALVERFLTSREFVAQVL 702
            EK + +    +   +VVQCIR++ +PQ HN+ALL ++++AS+FPE VL N+MPVFT MGA  + QDDNYSFQVIQ+ ++ I+P   +  RK +     AL+    P++++F DAL  +P HRRL LFTV + +L   ++ +  +++LL K T++      S AE+ +  F L +         ++A   L+N L  L  E   D  +       V   N  +L+    A L  V + LTS+ F+ +V+
Sbjct: 1243 EKGSTIEESALRVDIVVQCIRITGNPQTHNQALLLMATIASMFPECVLHNIMPVFTFMGANVLRQDDNYSFQVIQQTLEKILPPLVVSSRKSNNDDEIALVLEVKPILKVFVDALFHIPKHRRLRLFTVLIHTLGEDEFLYAIISLLLEKFTERLAKGAHSEAES-LTEFSLLISQHFGPETQMKAILALLNGLLVLPNEKPEDEAMVESHLFNVSEHNAKQLRQYKLATLNFVGQLLTSKGFLNKVM 1489          
BLAST of mRNA_M-pyrifera_M_contig95596.22039.1 vs. uniprot
Match: A0A367KX49_RHIST (U3 small nucleolar RNA-associated protein 10 n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367KX49_RHIST)

HSP 1 Score: 136 bits (342), Expect = 6.260e-33
Identity = 86/250 (34.40%), Postives = 142/250 (56.80%), Query Frame = 1
Query:    1 EKENEVLAEFVNATVVVQCIRVSKSPQIHNKALLFLSSMASVFPEQVLENVMPVFTVMGATTMAQDDNYSFQVIQKIVQTIVPRI-----RHRKGSEALL-----PLMRIFSDALHRVPSHRRLLLFTVFMSSLSSQQY-HCPLAMLLAKSTQQTTGTLPSGAETDVLGFCLALCHRLPAAAVVEAFTRLINALNSLAAE-PESDGVVALQKHM----PVRVRNQPRLQAAALALVERFLTSREFVAQVL 702
            EK   +    +   +VVQCIR++ +PQ HN+ALL ++++AS+FPE VL N+MPVFT MGA  + QDDNYSFQVIQ+ ++ I+P +     +     EA L     P++++F DAL  +P HRRL LFTV + +L   ++ +  +++LL K T++      S AE+ +  F L +         + A   L+N + +L  E PE + +   + H+        +   + + A L  + + LTS+ F+++V+
Sbjct: 1243 EKGATIEESDLRVDIVVQCIRITGNPQTHNQALLLMATIASMFPECVLHNIMPVFTFMGANVLRQDDNYSFQVIQQTLEKILPPLVVSSRKSNNDDEAALVLEVKPIIKVFVDALFHIPKHRRLRLFTVLIHTLGENEFLYAIISLLLEKFTERLAKGARSEAES-LTEFSLVISQHFSPETQMNAILALLNGMLALPNEKPEDEDMSEKEAHLFNLSEHSAKQLRQYKLATLNFIGQLLTSKGFLSKVM 1491          
BLAST of mRNA_M-pyrifera_M_contig95596.22039.1 vs. uniprot
Match: A0A167PRH3_PHYB8 (U3 small nucleolar RNA-associated protein 10 n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167PRH3_PHYB8)

HSP 1 Score: 136 bits (342), Expect = 6.260e-33
Identity = 89/250 (35.60%), Postives = 141/250 (56.40%), Query Frame = 1
Query:    1 EKENEVLAEFVNATVVVQCIRVSKSPQIHNKALLFLSSMASVFPEQVLENVMPVFTVMGATTMAQDDNYSFQVIQKIVQTIVPRI----RHRKGSEALL-----PLMRIFSDALHRVPSHRRLLLFTVFMSSLSSQQY-HCPLAMLLAKSTQQTTGTLPSGAETD---VLGFCLALCHRLPAAAVVEAFTRLINALNSLAAEPESDGVVALQKHMPVRVRNQPRLQA---AALALVERFLTSREFVAQVL 702
            EK+  V    +   VVVQCIRV+ +PQ HN+ALL ++++AS++PE VL N+MPVFT MGA  + QDDNYSFQVIQ+ ++ I+P +    R    +EA L     P++++F DA+  +P HRRL LF+V + +L   ++ +  +++LL K T++    L  GA T+   +  F L +  +      ++A   L+N L  L  +   D V+           N  +L+    A L  V + L SR F+ +++
Sbjct: 1242 EKKVHVDESTLRVDVVVQCIRVTGNPQTHNQALLLMATIASMYPECVLHNIMPVFTFMGANVLRQDDNYSFQVIQQTLEKIIPPLVASSRLSSNNEAALALQVKPIIKVFVDAMFHIPKHRRLRLFSVLIQTLGEDEFLYAIISLLLEKFTEK----LAKGARTEADSLTEFSLTISQQFSPQTQMKAVLSLLNGLLVLPNDKSEDEVMNQDTLFNTNEHNAKQLRQYKLATLNFVGQLLGSRSFLGKLM 1487          
BLAST of mRNA_M-pyrifera_M_contig95596.22039.1 vs. uniprot
Match: A0A8H7R4M6_9FUNG (U3 small nucleolar RNA-associated protein 10 n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7R4M6_9FUNG)

HSP 1 Score: 136 bits (342), Expect = 6.260e-33
Identity = 88/249 (35.34%), Postives = 141/249 (56.63%), Query Frame = 1
Query:    1 EKENEVLAEFVNATVVVQCIRVSKSPQIHNKALLFLSSMASVFPEQVLENVMPVFTVMGATTMAQDDNYSFQVIQKIVQTIVPRI-----RHRKGSEALL-----PLMRIFSDALHRVPSHRRLLLFTVFMSSLSSQQY-HCPLAMLLAKSTQQTTGTLPSGAETDVLGFCLALCHRLPAAAVVEAFTRLINALNSLAAEPESDGVVALQKHM-PVRVRNQPRLQA---AALALVERFLTSREFVAQVL 702
            EK   +    +   +VVQCIR++ +PQ HN+ALL ++++AS+FPE VL N+MPVFT MGA  + QDDNYSFQVIQ+ ++ I+P +     +     EA L     P++++F DAL  +P HRRL LFTV + +L   ++ +  +++LL K T++      S AE+ +  F L +         ++A   L+N L  L  E   D  +  + H+  +   N  +L+    A L  V + L+S+ F+ +V+
Sbjct: 1244 EKGAHIEESALRVDIVVQCIRITGNPQTHNQALLLMATIASMFPECVLHNIMPVFTFMGANVLRQDDNYSFQVIQQTLEKILPPLVVSSRKSNNDDEAALALEVKPIIKVFVDALFHIPKHRRLRLFTVLIHTLGEDEFLYAIISLLLEKFTERLAKGARSEAES-LTEFSLIISQHFGPETQMKAILSLLNGLLVLPNEKPEDETMGKELHLFNIAEHNAKQLRQYKLATLNFVGQLLSSKGFLNKVM 1491          
BLAST of mRNA_M-pyrifera_M_contig95596.22039.1 vs. uniprot
Match: A0A2G4SIH2_RHIZD (U3 small nucleolar RNA-associated protein 10 n=4 Tax=Rhizopus TaxID=4842 RepID=A0A2G4SIH2_RHIZD)

HSP 1 Score: 135 bits (341), Expect = 8.510e-33
Identity = 89/249 (35.74%), Postives = 142/249 (57.03%), Query Frame = 1
Query:    1 EKENEVLAEFVNATVVVQCIRVSKSPQIHNKALLFLSSMASVFPEQVLENVMPVFTVMGATTMAQDDNYSFQVIQKIVQTIVPR--IRHRKGSE----ALL----PLMRIFSDALHRVPSHRRLLLFTVFMSSLSSQQY-HCPLAMLLAKSTQQTTGTLPSGAETD---VLGFCLALCHRLPAAAVVEAFTRLINALNSLAAEPESDGVVALQKHM-PVRVRNQPRLQAAALALVERFLTSREFVAQVL 702
            E+  +V    +   VVVQCIR++ +PQ HN+ALL ++++AS++PE VL N+MP+FT MGA  + QDDNYSFQVIQ+ ++ I+P   +  RK +     AL+    P++++F DAL  +P HRRL LFT+ + +L   ++    +++LL K T++    L  GA  D   +  F L +C +      ++A   L+N L +L  E   D  +A   H+  +   N  +L+   LA +        F+AQ+L
Sbjct: 1243 ERGVKVEESALRVDVVVQCIRITGNPQTHNQALLLMANIASMYPECVLHNIMPLFTFMGANVLRQDDNYSFQVIQQTMEKILPPLVVSSRKSNNDDETALVLEVRPIIKVFVDALFHIPKHRRLRLFTILIHTLGEDEFLFAIISLLLEKFTER----LAKGARNDAESLTEFSLIICQQFAPKTQMKAILSLLNGLLALPNEKPEDDTMAEDNHLFNLAEHNSKQLRQYKLATLN-------FIAQLL 1480          
BLAST of mRNA_M-pyrifera_M_contig95596.22039.1 vs. uniprot
Match: A0A197K381_9FUNG (U3 small nucleolar RNA-associated protein 10 n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197K381_9FUNG)

HSP 1 Score: 135 bits (341), Expect = 8.540e-33
Identity = 84/250 (33.60%), Postives = 149/250 (59.60%), Query Frame = 1
Query:    4 KENEVLAE--FVNATVVVQCIRVSKSPQIHNKALLFLSSMASVFPEQVLENVMPVFTVMGATTMAQDDNYSFQVIQKIVQTIVPRI--RHRKGSEA-------LLPLMRIFSDALHRVPSHRRLLLFTVFMSSLSSQQY-HCPLAMLLAKSTQQTTGTLPSGAETDVLG-FCLALCHRLPAAAVVEAFTRLINALNSLAAEPESDGVVALQKHM-PVRVRNQPRLQA---AALALVERFLTSREFVAQVL 702
            +E  ++ E   +   +VV CIR + +PQ HN+ALL ++++AS+ P++VL N+MPVFT MGA  + QDDNYSF VIQ+ ++ I+P +   HR+ SEA       + P++++F DAL  +P HRRL LF++ +++L  + + H  + M++ K T++      +  E D L  F LAL ++  +   ++A   L++ + +L  E      V +++H+  ++  N  +++    AAL      LTS+ F++++L
Sbjct: 1248 EEKGIMVEEGILRVDLVVSCIRATGNPQTHNQALLLMAAIASLCPDKVLHNIMPVFTFMGANVLRQDDNYSFHVIQQTLEKIIPPLVAAHRRQSEAGQTLAFQVRPIIKVFVDALFHIPKHRRLRLFSILIATLGEEDFLHVVICMIVEKYTERAGKGHQT--EADSLSEFALALSNQFSSIVQMKAVIALMDIVQALPNEKVEGEDVEMEEHLFDIKTHNNKQIRQFKLAALTFSANVLTSKLFLSKIL 1495          
BLAST of mRNA_M-pyrifera_M_contig95596.22039.1 vs. uniprot
Match: A0A0L0HMC6_SPIPD (U3 small nucleolar RNA-associated protein 10 (Fragment) n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HMC6_SPIPD)

HSP 1 Score: 135 bits (340), Expect = 1.160e-32
Identity = 87/244 (35.66%), Postives = 145/244 (59.43%), Query Frame = 1
Query:   43 VVVQCIRVSKSPQIHNKALLFLSSMASVFPEQVLENVMPVFTVMGATTMAQDDNYSFQVIQKIVQTIVPRI--RHRKGSEA-------LLPLMRIFSDALHRVPSHRRLLLFTVFMSSLSSQQY-HCPLAMLLAKSTQQTTGTLPSGAETDVLG-FCLALCHRLPAAAVVEAFTRLINALNSLA-----------AEPESDGVVALQKHMPVRVRNQPRLQAAALALVERFLTSREFVAQVLRL 708
            ++VQCIRV+ +PQ HN +LL ++++A+V+P+ VL N+MPVFT MGA  + QDDNYSF VIQ+ + TI+P +  RH+   E+       + P+M +F DAL  +P HRRL LFTV +S+L +  +    + ML+AK + ++   LP  A TD LG F L++  + P +  ++A   ++N  ++L             + +  G++  + H    +R+   ++ A +    + L++R FV++VL L
Sbjct: 1259 LIVQCIRVTDNPQTHNASLLLMAAIATVYPQSVLLNIMPVFTFMGANVLRQDDNYSFHVIQQTLTTIIPPLVQRHQTAGESRERMLHEVKPVMGVFVDALSHIPKHRRLRLFTVLISTLGADTFLDAIILMLIAKHSAKSK--LPVNA-TDGLGEFTLSVMLQFPVSVQLKALISMLNTTSALPFDQAELDKEKQMDADESGIIDSKTHSAKELRH---IKLATVDFAHQLLSNRLFVSKVLDL 1496          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95596.22039.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1X2GGT8_9FUNG6.190e-3535.46U3 small nucleolar RNA-associated protein 10 n=1 T... [more]
A0A4P9Z677_9FUNG9.410e-3443.33U3 small nucleolar RNA-associated protein 10 n=1 T... [more]
A0A1C7NG14_9FUNG3.360e-3335.06U3 small nucleolar RNA-associated protein 10 (Frag... [more]
A0A8H7SGA3_9FUNG4.600e-3336.29U3 small nucleolar RNA-associated protein 10 n=1 T... [more]
A0A367KX49_RHIST6.260e-3334.40U3 small nucleolar RNA-associated protein 10 n=1 T... [more]
A0A167PRH3_PHYB86.260e-3335.60U3 small nucleolar RNA-associated protein 10 n=1 T... [more]
A0A8H7R4M6_9FUNG6.260e-3335.34U3 small nucleolar RNA-associated protein 10 n=1 T... [more]
A0A2G4SIH2_RHIZD8.510e-3335.74U3 small nucleolar RNA-associated protein 10 n=4 T... [more]
A0A197K381_9FUNG8.540e-3333.60U3 small nucleolar RNA-associated protein 10 n=1 T... [more]
A0A0L0HMC6_SPIPD1.160e-3235.66U3 small nucleolar RNA-associated protein 10 (Frag... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig95596contigM-pyrifera_M_contig95596:9..719 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score132.9
Seed ortholog evalue2e-28
Seed eggNOG ortholog109760.SPPG_02486T0
Preferred nameUTP10
KEGG koko:K14550
KEGG Pathwayko03008,map03008
Hectar predicted targeting categoryother localisation
GOsGO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000472,GO:0000478,GO:0000479,GO:0000480,GO:0000785,GO:0000792,GO:0000966,GO:0000967,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005730,GO:0005732,GO:0005737,GO:0005739,GO:0006139,GO:0006355,GO:0006356,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0016021,GO:0016070,GO:0016072,GO:0019219,GO:0019222,GO:0022613,GO:0030490,GO:0030515,GO:0030684,GO:0030686,GO:0030688,GO:0031224,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032040,GO:0032991,GO:0033553,GO:0034455,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0045893,GO:0045935,GO:0045943,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:1901360,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990904,GO:2000112,GO:2001141
EggNOG free text desc.U3 small nucleolar RNA-associated protein
EggNOG OGs38FG2@33154,3NV87@4751,KOG1837@1,KOG1837@2759
COG Functional cat.S
Best tax levelFungi
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009
Exons1
Model size711
Cds size711
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816870.0163956-CDS-M-pyrifera_M_contig95596:8..7191622816870.0163956-CDS-M-pyrifera_M_contig95596:8..719Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig95596 9..719 -
1692278226.7526014-CDS-M-pyrifera_M_contig95596:8..7191692278226.7526014-CDS-M-pyrifera_M_contig95596:8..719Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig95596 9..719 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig95596.22039.1prot_M-pyrifera_M_contig95596.22039.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig95596 9..719 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig95596.22039.1

>prot_M-pyrifera_M_contig95596.22039.1 ID=prot_M-pyrifera_M_contig95596.22039.1|Name=mRNA_M-pyrifera_M_contig95596.22039.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=237bp
EKENEVLAEFVNATVVVQCIRVSKSPQIHNKALLFLSSMASVFPEQVLEN
VMPVFTVMGATTMAQDDNYSFQVIQKIVQTIVPRIRHRKGSEALLPLMRI
FSDALHRVPSHRRLLLFTVFMSSLSSQQYHCPLAMLLAKSTQQTTGTLPS
GAETDVLGFCLALCHRLPAAAVVEAFTRLINALNSLAAEPESDGVVALQK
HMPVRVRNQPRLQAAALALVERFLTSREFVAQVLRLS
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mRNA from alignment at M-pyrifera_M_contig95596:9..719-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig95596.22039.1 ID=mRNA_M-pyrifera_M_contig95596.22039.1|Name=mRNA_M-pyrifera_M_contig95596.22039.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=711bp|location=Sequence derived from alignment at M-pyrifera_M_contig95596:9..719- (Macrocystis pyrifera P11B4 male)
GAGAAGGAGAACGAGGTGCTGGCGGAGTTCGTCAACGCAACGGTGGTGGT GCAGTGCATCCGCGTCTCAAAGAGCCCGCAGATCCACAACAAGGCACTCC TGTTTCTCTCGTCGATGGCCTCTGTGTTCCCTGAGCAGGTGCTGGAAAAC GTGATGCCTGTTTTCACCGTGATGGGTGCCACTACTATGGCGCAGGACGA CAACTACAGCTTCCAGGTCATCCAGAAGATTGTGCAGACGATCGTGCCGA GGATCCGCCACAGGAAGGGCAGCGAAGCCCTCCTCCCCCTGATGCGGATC TTCAGCGACGCCCTCCACAGGGTTCCCTCACACAGGCGCCTCTTGCTTTT CACCGTCTTCATGAGCAGCCTTTCTTCGCAACAGTACCATTGCCCGCTGG CCATGCTGCTCGCCAAGAGCACTCAGCAGACCACAGGGACACTTCCCTCT GGCGCAGAGACCGATGTGCTCGGCTTCTGCCTGGCACTCTGCCACAGGCT CCCAGCAGCAGCTGTGGTGGAGGCATTCACCCGTCTCATCAACGCTCTGA ACAGCCTCGCTGCCGAGCCAGAGAGCGACGGAGTGGTGGCCCTGCAGAAG CACATGCCTGTGCGTGTGCGCAACCAGCCCCGCCTTCAGGCTGCAGCTCT GGCTCTGGTCGAGCGCTTCCTCACTTCACGAGAGTTCGTCGCCCAAGTGC TTCGTCTCTCT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig95596:9..719-

>mRNA_M-pyrifera_M_contig95596.22039.1 ID=mRNA_M-pyrifera_M_contig95596.22039.1|Name=mRNA_M-pyrifera_M_contig95596.22039.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1422bp|location=Sequence derived from alignment at M-pyrifera_M_contig95596:9..719- (Macrocystis pyrifera P11B4 male)
GAGAAGGAGAACGAGGTGCTGGCGGAGTTCGTCAACGCAACGGTGGTGGT
GCAGTGCATCCGCGTCTCAAAGAGCCCGCAGATCCACAACAAGGCACTCC
TGTTTCTCTCGTCGATGGCCTCTGTGTTCCCTGAGCAGGTGCTGGAAAAC
GTGATGCCTGTTTTCACCGTGATGGGTGCCACTACTATGGCGCAGGACGA
CAACTACAGCTTCCAGGTCATCCAGAAGATTGTGCAGACGATCGTGCCGA
GGATCCGCCACAGGAAGGGCAGCGAAGCCCTCCTCCCCCTGATGCGGATC
TTCAGCGACGCCCTCCACAGGGTTCCCTCACACAGGCGCCTCTTGCTTTT
CACCGTCTTCATGAGCAGCCTTTCTTCGCAACAGTACCATTGCCCGCTGG
CCATGCTGCTCGCCAAGAGCACTCAGCAGACCACAGGGACACTTCCCTCT
GGCGCAGAGACCGATGTGCTCGGCTTCTGCCTGGCACTCTGCCACAGGCT
CCCAGCAGCAGCTGTGGTGGAGGCATTCACCCGTCTCATCAACGCTCTGA
ACAGCCTCGCTGCCGAGCCAGAGAGCGACGGAGTGGTGGCCCTGCAGAAG
CACATGCCTGTGCGTGTGCGCAACCAGCCCCGCCTTCAGGCTGCAGCTCT
GGCTCTGGTCGAGCGCTTCCTCACTTCACGAGAGTTCGTCGCCCAAGTGC
TTCGTCTCTCTGAGAAGGAGAACGAGGTGCTGGCGGAGTTCGTCAACGCA
ACGGTGGTGGTGCAGTGCATCCGCGTCTCAAAGAGCCCGCAGATCCACAA
CAAGGCACTCCTGTTTCTCTCGTCGATGGCCTCTGTGTTCCCTGAGCAGG
TGCTGGAAAACGTGATGCCTGTTTTCACCGTGATGGGTGCCACTACTATG
GCGCAGGACGACAACTACAGCTTCCAGGTCATCCAGAAGATTGTGCAGAC
GATCGTGCCGAGGATCCGCCACAGGAAGGGCAGCGAAGCCCTCCTCCCCC
TGATGCGGATCTTCAGCGACGCCCTCCACAGGGTTCCCTCACACAGGCGC
CTCTTGCTTTTCACCGTCTTCATGAGCAGCCTTTCTTCGCAACAGTACCA
TTGCCCGCTGGCCATGCTGCTCGCCAAGAGCACTCAGCAGACCACAGGGA
CACTTCCCTCTGGCGCAGAGACCGATGTGCTCGGCTTCTGCCTGGCACTC
TGCCACAGGCTCCCAGCAGCAGCTGTGGTGGAGGCATTCACCCGTCTCAT
CAACGCTCTGAACAGCCTCGCTGCCGAGCCAGAGAGCGACGGAGTGGTGG
CCCTGCAGAAGCACATGCCTGTGCGTGTGCGCAACCAGCCCCGCCTTCAG
GCTGCAGCTCTGGCTCTGGTCGAGCGCTTCCTCACTTCACGAGAGTTCGT
CGCCCAAGTGCTTCGTCTCTCT
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