mRNA_M-pyrifera_M_contig9484.21877.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig9484.21877.1 vs. uniprot
Match: A0A6H5L2Z5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Z5_9PHAE) HSP 1 Score: 237 bits (605), Expect = 1.680e-59 Identity = 416/1077 (38.63%), Postives = 480/1077 (44.57%), Query Frame = 1
Query: 1 QMLFYLRDIIKRPDVSALGLMWREGAGPLVDGGASLSSLGLQADTA---PLATAEAXXXXXXXXXXXXXXXXGDSEHSPTSPWGSFGRAASGXXXXXXXXXTRRRVGEVNAGAGEGAAGGATAAVATAAGWTAARKGIDGELALLYLLDTNAFRTLVLRHXXXXXXXXXXXXXXXK------------------------------------------------------------SFGARRMKSVGALHGLGSFVTRKVTG--GSKKFQGGSDGG-DSDIGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGCGELSMEKMTELRQQRAAAELGAGPMAXXXXXXXXXSFGSSPYGTGSFGXXXXXXXSVGDSPEVGVDGIPAAVDVKARKVLGLP-QARSSLGGXXXXPPSAP-------------------GSGGSGRA-------SAPFPRRASNKTPPALPPPQPKHGRNHLDHPDFSSSSSHA---------------------GRAGFPSASGGGASGADLAVTETAAKMVMGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAGAGVRGLSKAHLPPRDGQSRAAARAARDEADKLAALRHFAAEAKLETDATRASAAASRDNLA------GRRGSASLGSSMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMDRIDPPILPSGEALVEGSKAWKVLGASDGAAXXXXXXXXXXXXXXXXWSSSGRSSHPALPSSIVSTSAS--FDSVDSNHQYHMR---KASPNPPPPGVPRLVMDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXGFSNLGGGGAFLSTP-----QRWGEPLSPGAQTPPPGCSGGGMXXXXXTMSGMVDTGINGGXXXXFGVS-----ELALDLCGDERGRPEAP-----ALGGRSRSSSLWANVTAADAEMAAANVPPPIWGRRGSGEQGFSAGGAGGGRSKVLTSHSAASTPRGSREAGMWGGGGAGEKAS--VSKTPGRLPRRLHQGVNKVKRVVGVGEFFPASGQVGPAGLGTPS-RTPRG 2802
Q+L LR+II+RPDV+AL L+WREGAGPLVD G SL S G Q DT P+++ A XXXXXXXXXXXXX A XXXXXXXXX A AAG ATA +TAAGWT+ARKGID ELALLYLLD +AF LV+RH G+RRMKSVGAL GLGSFV+RKV+G GS + Q DGG DSD+GDGXXXXXXXXXXXXXXX G GEL KM ELR+QR AA M S S S G S E DGIPAA+D KARK+LGLP R+S+G +GG+G S P P+R + A P P + H D S+++ G S G S A LA + M S+ XXXXXXXXXXXXXXXXXXXXXX XXX X XXXXX S AHLPPRDG SRAAARAAR EADKLAALRHF +EAKLET A+R+ A+ + A GRRG A GS M +IDPP+LPSGE L E SKAWKVLGA XXXXXXXXXXXX +S S +LPS++V+TS S FD + R K SP+P PP PRL M+GS + + TP +R PLSPGAQTPPP G + +V G N +S + G+ GR + + R S WAN TAA+AE AAA V PP WG R +GF + + S ASTPR V +TPGRLPRRLHQGVNKVKR VGVGE+ P SGQ+ PAG RTPRG
Sbjct: 52 QLLLNLREIIQRPDVTALSLLWREGAGPLVDSGTSLDSRG-QLDTEQMQPISSPTARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAXXXXXXXXXXXXXXXXXXXXXPA--TAAGDATA-TSTAAGWTSARKGIDRELALLYLLDVSAFHGLVVRHQQYVSQASQAAVPPPSLGTAGLAVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRRMKSVGALQGLGSFVSRKVSGSRGSGRHQ---DGGVDSDVGDGXXXXXXXXXXXXXXX---------------GFGELPPGKMAELRRQREAAGAAFNMMGGGFGSGSAHSVPSPADSWDSAGHWDEKKQSQIQLGEEAGDGIPAAIDGKARKILGLPPHRRASVGASVSAXXXXXXXXXXXXXXXXXXXXXXXRAAGGAGMPPXXXXSRSGPLPKRTPVRPVQASPSPLRVQNQQHHFPGDGSATAGRGPXXXXXXXXXXXXXXXXXXTGGHDAVLSTPEAGISMAPLAEGDVYGVMPTSSSGSEDXXXXXXXXXXXXXXXXXXXXXXGGXXXGXESCXXXXXGGTAFCSXXXXXXXXXXS-AHLPPRDGTSRAAARAARMEADKLAALRHFVSEAKLETMASRSGGGAATVDAAAEAATRGRRGRARSGSG--------------------GAQLVVWNDKEEEDARAEMAKIDPPLLPSGELLPEDSKAWKVLGAGXXXXXXXXXXXXXXXXSVRSFSGS------SLPSALVTTSRSEEFDLGFVRSKLARRGDQKLSPSPSPPLHPRLTMEGSGRTVDGRPLSLSLASFDIGAGTASKVA--KQWAACNSVVPTPHGGTTRRADPPLSPGAQTPPPLSPPG-----ISDLGSVVVVGNNSNKALTLTMSGXXXXDXXXXXXGEHDGRHQQKNTLRSPVSARGGPRSHWANTTAAEAEAAAAAVSPPSWGAR----KGF-----------LSSGPSPASTPRAGXXXXXXXXXXXXXXXGSVVVRTPGRLPRRLHQGVNKVKRAVGVGEYNPVSGQIMPAGGSAAGPRTPRG 1057
BLAST of mRNA_M-pyrifera_M_contig9484.21877.1 vs. uniprot
Match: D7FQV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV9_ECTSI) HSP 1 Score: 236 bits (601), Expect = 4.430e-59 Identity = 441/1059 (41.64%), Postives = 500/1059 (47.21%), Query Frame = 1
Query: 1 QMLFYLRDIIKRPDVSALGLMWREGAGPLVDGGASLSSLGLQADTAPLA-----TAEAXXXXXXXXXXXXXXXXGDSEHSPTSPWGSFGRAASGXXXXXXXXXTRRRVGEVNAGAGEGAAGGATAAVATAAGWTAARKGIDGELALLYLLDTNAFRTLVLRHXXXXXXXXXXXXXXXKSFGARRMKSVGALHGLGSFVTRKVTG--GSKKFQGGSDGG-DSDIGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGCGELSMEKMTELRQQRAAAELGAGPMAXXXXXXXXXSFGSSPYGTGSFGXXXXXXXSVGDSPEVGVDGIPAAVDVKARKVLGLPQARSSLGGXXXXPPSAPGSGGSGRA-------------------------------SAPFPRRASNKTPPALPPPQPKHGRNHLDHPDFSSSSSHAGRAGFPSASGGG-----------ASGADLAVTETAAKM----------VMGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAGAGVRGLSKAHLPPRDGQSRAAARAARDEADKLAALRHFAAEAKLETDATRASAAASRDNLAGRRGSASLGSSMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMDRIDPPILPSGEALVEGSKAWKVLGASDGAAXXXXXXXXXXXXXXXXWSSSGRSSHPALPSSIVSTSAS--FDSVDSNHQYHMR---KASPNPPPPGVPRLVMDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXGFSNLGGGGAFLSTP-----QRWGEPLSPGAQTPPP----GCSGGGMXXXXXTMSGMVDT----GINGGXXXXFGVSELALDLCGDERGRPEAPALGGRSRSSSLWANVTAADAEMAAANVPPPIWGRRGSGEQGFSAGGAGGGRSKVLTSHSAASTPRGSREAGMWGGGGAGEKAS--VSKTPGRLPRRLHQGVNKVKRVVGVGEFFPASGQVGPAGLGTPS-RTPRGSGSVGG-GGASSGGESTPHAAYFPSPRRSQPRSAPDGSQDGDFS 2931
++L LR+II+RPDV+AL L+WREGAGPLVD G SL S G Q DT + TA AXXXXXXXXXXXXXXXX XXXXXXXXX + AAG ATA +TAAGWT+ARKGID ELALLYLLD +AF LV SFG+RRMKSVGAL GLGSFV+RKV+G GS + Q DGG DSD+GDG XXXXXXXXXXXX GG GEL KM ELR+QR AA + M S S S G E DGIPAA+D KARK+LGLP R + G S+P G S P+R + A P P P + H F S A G P G G A L+ ET M VM + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G HLPPRDG SRAAARAAR EADKLAALRHF +EAKLET A+R+ XXXXXXXXXXXXXXXXXX M RIDPP+LPSGE L E SKAWK+LGA S SG S LPS++V+TS S FD + R K SP+P PP PRL M+G + + TP +R PLSPG QTPPP G S G S T G +GG G + D +++ +P + R S WA+ TAA+AE PP WG R +GFS+ G HS A V +TPGRLPRRLHQGVNKVKR VGVGE+ P SGQV PAG RTPRG GG +G ++ HA PSPRR R+ DG+ S
Sbjct: 5 KLLLNLREIIQRPDVTALSLLWREGAGPLVDSGTSLDSRG-QLDTEQMQPISSPTARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAI-------AAGDATA-TSTAAGWTSARKGIDSELALLYLLDVSAFHRLVA------GTEQGAAATGPSSFGSRRMKSVGALQGLGSFVSRKVSGSRGSGRHQ---DGGVDSDVGDGGXXXXXXXXXXXX----------------GGFGELPAGKMAELRRQREAAGAASNMMGGSFGSGSAHSVPSPADSWDSAGHWDEKKQYQIQLGEEAGDGIPAAIDGKARKILGLPPHRRASVGASASAGSSPAPGAHXXXXXXXXXXXXXXXXXXXXXXXXXMPPPPPPSRSGSLPKRTPVRPVQASPSPLPVQNQQH----HFPGDGSAAAGWGPPLQPGTGXXXXXXXXXXXGHDAVLSTPETGTSMSPFAGGGVYGVMSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSG----HLPPRDGTSRAAARAARMEADKLAALRHFVSEAKLETKASRSGXX--------------XXXXXXXXXXXXXXXXXXXXXXXXGAQLVVWNDTEEEDARAEMARIDPPLLPSGELLPEDSKAWKLLGAGGSGNGKGVGGVGGSVR-----SFSGSS----LPSALVATSRSEEFDVGSLRSKLARRGDNKLSPSPSPPLHPRLTMEGYGRTADGRPLSLSLASFDIGAGTASKVA--KQWAACNSVVPTPHGGTTRRADPPLSPGVQTPPPLSPPGISDLGSVVVLGNDSNKALTLTMSGASGG-----GGDAVEHDGRHEQKNTLRSP-VSARGGPRSHWASTTAAEAEXXXXXXXPPSWGAR----KGFSSSG-----------HSPAXXXXXXXXXXXXXXXXXXXXXGSVVIRTPGRLPRRLHQGVNKVKRAVGVGEYNPGSGQVMPAGGSAAGPRTPRGGXXXSSDGGFDTGATASVHA---PSPRRGFRRTGSASGADGESS 972 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9484.21877.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9484.21877.1 >prot_M-pyrifera_M_contig9484.21877.1 ID=prot_M-pyrifera_M_contig9484.21877.1|Name=mRNA_M-pyrifera_M_contig9484.21877.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=1303bp MLFYLRDIIKRPDVSALGLMWREGAGPLVDGGASLSSLGLQADTAPLATAback to top mRNA from alignment at M-pyrifera_M_contig9484:549..6563- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig9484.21877.1 ID=mRNA_M-pyrifera_M_contig9484.21877.1|Name=mRNA_M-pyrifera_M_contig9484.21877.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6015bp|location=Sequence derived from alignment at M-pyrifera_M_contig9484:549..6563- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig9484:549..6563- >mRNA_M-pyrifera_M_contig9484.21877.1 ID=mRNA_M-pyrifera_M_contig9484.21877.1|Name=mRNA_M-pyrifera_M_contig9484.21877.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=7818bp|location=Sequence derived from alignment at M-pyrifera_M_contig9484:549..6563- (Macrocystis pyrifera P11B4 male)back to top |