mRNA_M-pyrifera_M_contig94721.21856.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig94721.21856.1 vs. uniprot
Match: A0A7K1ZE18_9ACTN (NADH-quinone oxidoreductase subunit N n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZE18_9ACTN) HSP 1 Score: 260 bits (664), Expect = 6.400e-81 Identity = 140/189 (74.07%), Postives = 163/189 (86.24%), Query Frame = 1 Query: 1 DAKRMLAYSSISHAGFILVGVQAATDRGVAAVVFYVAAYTFMVVGSFGVLSIVSGRGDRGTSLDDLDGLGNRNPMLALALTLFLLGQAGVPFTTGFVAKFEVIGAAVDARSYWLAVVAMVSAVVSAFLYLRIVLSMYLGTAAEGR----DEPI-RVHPTAALAVGVALVLTIGFGIVPGPIDSLASDAL 552 D KRMLAYSSISHAGFILVGV+AA+ RG AAVVFYVAAY FMV+G+FGVL++VSG GDR T+LDDLDGL R P LALALT+FLL QAGVP TTGFVAKFE+IGAAV+ RS+WLAVVAMVSAVVSAFLYLRIVLS+YLG+ A+ D P+ RVHP A LA+G+AL +TIGFG++PGPID LA++A+ Sbjct: 390 DVKRMLAYSSISHAGFILVGVEAASARGTAAVVFYVAAYAFMVIGTFGVLTVVSGPGDRKTNLDDLDGLAARRPALALALTIFLLAQAGVPLTTGFVAKFEIIGAAVEVRSFWLAVVAMVSAVVSAFLYLRIVLSVYLGSPADDSESSDDAPVERVHPAAGLAIGIALAVTIGFGLIPGPIDELATEAI 578
BLAST of mRNA_M-pyrifera_M_contig94721.21856.1 vs. uniprot
Match: A0A2E0T3M8_9ACTN (NADH-quinone oxidoreductase subunit N n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0T3M8_9ACTN) HSP 1 Score: 242 bits (618), Expect = 1.060e-75 Identity = 134/188 (71.28%), Postives = 155/188 (82.45%), Query Frame = 1 Query: 1 DAKRMLAYSSISHAGFILVGVQAATDRGVAAVVFYVAAYTFMVVGSFGVLSIVSGRGDRGTSLDDLDGLGNRNPMLALALTLFLLGQAGVPFTTGFVAKFEVIGAAVDARSYWLAVVAMVSAVVSAFLYLRIVLSMYLGTAAEGRDEP-IRVHPTAALAVGVALVLTIGFGIVPGPIDSLASDALLAL 561 DAKRMLAYSSISHAGFILVGVQAA+D G+++V+FY AYTF+V+GSFGVLSIVSG GDRGTSLD LDGL R P LALALT+FLL QAGVP T+GFVAKF VIGAAV+ARSYWLA+ AMV+AVVSAFLYLRI+LSMYLG + D P IRV A LA+ VA V+T+GFG+VPG + + DA+ L Sbjct: 246 DAKRMLAYSSISHAGFILVGVQAASDEGISSVLFYAVAYTFLVIGSFGVLSIVSGEGDRGTSLDHLDGLSTRRPALALALTVFLLAQAGVPLTSGFVAKFAVIGAAVEARSYWLAIAAMVTAVVSAFLYLRIILSMYLGQXED--DAPTIRVPRXAGLAIIVAXVITVGFGLVPGELXDITRDAVPVL 431
BLAST of mRNA_M-pyrifera_M_contig94721.21856.1 vs. uniprot
Match: A0A2D7RXE3_9ACTN (NADH-quinone oxidoreductase subunit N n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D7RXE3_9ACTN) HSP 1 Score: 233 bits (595), Expect = 6.600e-71 Identity = 131/183 (71.58%), Postives = 149/183 (81.42%), Query Frame = 1 Query: 4 AKRMLAYSSISHAGFILVGVQAATDRGVAAVVFYVAAYTFMVVGSFGVLSIVSGRGDRGTSLDDLDGLGNRNPMLALALTLFLLGQAGVPFTTGFVAKFEVIGAAVDARSYWLAVVAMVSAVVSAFLYLRIVLSMYLGTAAEGRDEP-IRVHPTAALAVGVALVLTIGFGIVPGPIDSLASDA 549 AKRMLAYSSISHAGFILVGVQAA+ G ++V+FY AYT +V+GSFGVL IVSG GDRGTSLD LDGL R P LALALT+FLL QAGVP T+GFVAKF V GAAV+ARSYWLA+ AMV+AVVSAFLYLRI+LSMYLG A + D P IRV A LA VALV+T+GFG+VPG +D + DA Sbjct: 374 AKRMLAYSSISHAGFILVGVQAASXEGXSSVLFYAVAYTXLVIGSFGVLXIVSGEGDRGTSLDHLDGLSTRRPALALALTVFLLAQAGVPLTSGFVAKFAVXGAAVEARSYWLAIAAMVTAVVSAFLYLRIILSMYLGQAED--DAPTIRVPRAAGLAXIVALVITVGFGLVPGELDDITRDA 554
BLAST of mRNA_M-pyrifera_M_contig94721.21856.1 vs. uniprot
Match: A0A7X5WRR5_9ACTN (NADH-quinone oxidoreductase subunit NuoN (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WRR5_9ACTN) HSP 1 Score: 231 bits (590), Expect = 1.170e-70 Identity = 129/149 (86.58%), Postives = 136/149 (91.28%), Query Frame = 1 Query: 1 DAKRMLAYSSISHAGFILVGVQAATDRGVAAVVFYVAAYTFMVVGSFGVLSIVSGRGDRGTSLDDLDGLGNRNPMLALALTLFLLGQAGVPFTTGFVAKFEVIGAAVDARSYWLAVVAMVSAVVSAFLYLRIVLSMYLGT--AAEGRDE 441 DAKRMLAYSSISHAGFILVGVQAA+ RGVAAVVFYVAAY+FMV+GSFG+LSIVSG GDRGTSLDDLDGLG R P LALALT FLL QAGVP TTGFVAKFEVIGAAVDARSYWLAVVAM+SAVVSAFLYLRIVLS+YLG A +G DE Sbjct: 351 DAKRMLAYSSISHAGFILVGVQAASSRGVAAVVFYVAAYSFMVIGSFGILSIVSGPGDRGTSLDDLDGLGARRPALALALTFFLLAQAGVPLTTGFVAKFEVIGAAVDARSYWLAVVAMLSAVVSAFLYLRIVLSLYLGRSGAEDGGDE 499
BLAST of mRNA_M-pyrifera_M_contig94721.21856.1 vs. uniprot
Match: A0A6B1GZ29_9ACTN (NADH-quinone oxidoreductase subunit N n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6B1GZ29_9ACTN) HSP 1 Score: 209 bits (532), Expect = 4.300e-62 Identity = 113/189 (59.79%), Postives = 148/189 (78.31%), Query Frame = 1 Query: 1 DAKRMLAYSSISHAGFILVGVQAATDRGVAAVVFYVAAYTFMVVGSFGVLSIVSGRGDRGTSLDDLDGLGNRNPMLALALTLFLLGQAGVPFTTGFVAKFEVIGAAVDARSYWLAVVAMVSAVVSAFLYLRIVLSMYLGTAAEGRDEP-IRVHPTAALAVGVALVLTIGFGIVPGPIDSLASDALLALA 564 D KR+LAYSSISHAGFILVG+QAATD GVA+V+FY+AAY M +GSF V+++VS GD GT +D L GL R P+LA+A T+ LL QAG+PFT GF AKFEVI AAVDARS+WLAV+AM++AVV+AFLYLRIV++M+L A D P +R+ A+A+ + ++ T+ FGI P P+ +LA DALL+++ Sbjct: 316 DVKRILAYSSISHAGFILVGLQAATDEGVASVLFYLAAYAAMAIGSFAVITVVSSSGDEGTGIDSLRGLAARRPLLAVAFTVLLLSQAGIPFTAGFWAKFEVISAAVDARSFWLAVIAMLAAVVAAFLYLRIVVAMFLD--APDPDAPRLRIPRGPAMAIAIVVLFTLAFGIYPEPLLNLADDALLSIS 502
BLAST of mRNA_M-pyrifera_M_contig94721.21856.1 vs. uniprot
Match: A0A3M2GBV3_ACTSX (NADH-quinone oxidoreductase subunit N (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GBV3_ACTSX) HSP 1 Score: 205 bits (522), Expect = 1.130e-61 Identity = 115/185 (62.16%), Postives = 142/185 (76.76%), Query Frame = 1 Query: 1 DAKRMLAYSSISHAGFILVGVQAATDRGVAAVVFYVAAYTFMVVGSFGVLSIVSGRGDRGTSLDDLDGLGNRNPMLALALTLFLLGQAGVPFTTGFVAKFEVIGAAVDARSYWLAVVAMVSAVVSAFLYLRIVLSMYLGTAAEGRDEP-IRVHPTAALAVGVALVLTIGFGIVPGPIDSLASDAL 552 D KRMLAYSSI HAGF+LV V++A DRGVAA +FY+A Y +V+GSFG++++VSG GDR T L DLDGL R P LALA T+ LL QAGVP T+GFVAKFEV+ AAVDA SYWLA VAMV+AVV+AF+YLRI+LS+YLG A D P I V A + VA+ +T+ G+VPGP+ LA+DA+ Sbjct: 213 DVKRMLAYSSIVHAGFVLVAVESAGDRGVAAALFYLATYAVLVLGSFGIITVVSGPGDRATRLADLDGLAARRPALALAFTVLLLAQAGVPLTSGFVAKFEVVTAAVDAHSYWLAGVAMVAAVVAAFVYLRILLSLYLGRPAA--DAPAIAVPGLAGAVIAVAVAVTLVVGMVPGPLHDLATDAV 395
BLAST of mRNA_M-pyrifera_M_contig94721.21856.1 vs. uniprot
Match: A0A6G2KL54_9ACTN (NADH-quinone oxidoreductase subunit N n=3 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6G2KL54_9ACTN) HSP 1 Score: 206 bits (524), Expect = 5.790e-61 Identity = 117/188 (62.23%), Postives = 144/188 (76.60%), Query Frame = 1 Query: 1 DAKRMLAYSSISHAGFILVGVQAATDRGVAAVVFYVAAYTFMVVGSFGVLSIVSGRGDRGTSLDDLDGLGNRNPMLALALTLFLLGQAGVPFTTGFVAKFEVIGAAVDARSYWLAVVAMVSAVVSAFLYLRIVLSMYLGTAAEGRDEP-IRVHPTAALAVGVALVLTIGFGIVPGPIDSLASDALLAL 561 D KR+LAYSSISHAGFILVGVQAATD GVA+V+FY+AAY M +GSF V+++VSG GD GT LD L GL R+P+LA A T+ LL QAG+PFT GF AKFEVI AAVDARS+WLAV+AM++AVV+AFLYLRIV++M+L A D P +R+ ALA+ + ++ T+ FGI P PI LA A L L Sbjct: 309 DVKRILAYSSISHAGFILVGVQAATDDGVASVLFYLAAYAAMAIGSFAVITLVSGPGDEGTGLDSLRGLAARHPLLAAAFTVLLLSQAGIPFTVGFWAKFEVITAAVDARSFWLAVIAMLAAVVAAFLYLRIVVAMFLD--APDPDAPRLRIPRGPALAITIVVLFTLAFGIYPEPILDLADHAQLTL 494
BLAST of mRNA_M-pyrifera_M_contig94721.21856.1 vs. uniprot
Match: A0A7V9T0X5_9ACTN (NADH-quinone oxidoreductase subunit N n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9T0X5_9ACTN) HSP 1 Score: 202 bits (515), Expect = 1.790e-59 Identity = 115/200 (57.50%), Postives = 143/200 (71.50%), Query Frame = 1 Query: 1 DAKRMLAYSSISHAGFILVGVQAATDRGVAAVVFYVAAYTFMVVGSFGVLSIVSGRGDRGTSLDDLDGLGNRNPMLALALTLFLLGQAGVPFTTGFVAKFEVIGAAVDARSYWLAVVAMVSAVVSAFLYLRIVLSMYLGTAAEGRDEPI-----------RVHPTAALAVGVALVLTIGFGIVPGPIDSLASDALLALAG 567 D KRMLAYSSI+HAGF+LVGVQAA+DRGV+ +FY+ AYTFMVVGSFGV+++VS RGD +D GL P+LAL T+FLL QAGVPFT+GF+AKF VIGAAVDA SY LA++AM+SA VSA+LYLRIV++MY+G+ EG RV A +++ VALV+T+ GI+PGP LA DA G Sbjct: 316 DVKRMLAYSSINHAGFVLVGVQAASDRGVSGALFYLLAYTFMVVGSFGVVTLVSRRGDDDHGIDTYRGLATSRPLLALVFTVFLLAQAGVPFTSGFLAKFNVIGAAVDAESYALAILAMLSAAVSAYLYLRIVVAMYMGSPEEGEGAEAGDDARRAAARPRVPALAGISLAVALVVTLLVGILPGPAIDLADDATAEQVG 515
BLAST of mRNA_M-pyrifera_M_contig94721.21856.1 vs. uniprot
Match: A0A538CVX3_9ACTN (NADH-quinone oxidoreductase subunit N n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538CVX3_9ACTN) HSP 1 Score: 196 bits (497), Expect = 2.560e-59 Identity = 109/188 (57.98%), Postives = 142/188 (75.53%), Query Frame = 1 Query: 1 DAKRMLAYSSISHAGFILVGVQAATDRGVAAVVFYVAAYTFMVVGSFGVLSIVSGRGDRGTSLDDLDGLGNRNPMLALALTLFLLGQAGVPFTTGFVAKFEVIGAAVDARSYWLAVVAMVSAVVSAFLYLRIVLSMYLGTAAEGRDEP-IRVHPTAALAVGVALVLTIGFGIVPGPIDSLASDALLAL 561 D KRMLAYSSISHAGFILVGV+AA+ +G A+ +FY+AAYTFMV+G+FGV+++V GD SL D GLG+R P+LA A TL LL QAGVP TTGF AKF VI AA+D SYWLA+VAMV++V++AFLYLRIVL+MY G A E D P + + A +A+ +A+ +T+ FG +P ++ A DA+ A+ Sbjct: 92 DVKRMLAYSSISHAGFILVGVEAASAKGTASCLFYLAAYTFMVIGTFGVVTLVGRTGDARHSLTDYRGLGSRRPVLAFAFTLLLLAQAGVPLTTGFFAKFYVISAAIDVHSYWLAIVAMVASVIAAFLYLRIVLAMYAGEA-EADDAPRVAIPSLAGVAIVIAVGVTVVFGFLPQILEHWARDAVPAI 278
BLAST of mRNA_M-pyrifera_M_contig94721.21856.1 vs. uniprot
Match: A0A5Q2RDV2_9ACTN (NADH-quinone oxidoreductase subunit N n=2 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RDV2_9ACTN) HSP 1 Score: 200 bits (509), Expect = 1.320e-58 Identity = 111/192 (57.81%), Postives = 141/192 (73.44%), Query Frame = 1 Query: 1 DAKRMLAYSSISHAGFILVGVQAATDRGVAAVVFYVAAYTFMVVGSFGVLSIVSGRGDRGTSLDDLDGLGNRNPMLALALTLFLLGQAGVPFTTGFVAKFEVIGAAVDARSYWLAVVAMVSAVVSAFLYLRIVLSMYLGTAAEGRDEPIR-----VHPTAALAVGVALVLTIGFGIVPGPIDSLASDALLAL 561 D KRMLAYSSI+HAGF+LV VQA T +G+ A +FY+A+Y F+V GSFGV+S+VSG GD TSLDD+ GL P LALALT+FLL QAGVP T+GF AKF VI AAVDARSYWLA+ AMV++V++A LYLRIV++MYL +EP+ + A A+G+A+V TI GI+PG + +A DA+ L Sbjct: 318 DIKRMLAYSSINHAGFVLVAVQADTPQGIQAALFYLASYVFLVAGSFGVVSLVSGNGDARTSLDDIRGLARSRPGLALALTVFLLAQAGVPLTSGFFAKFYVIAAAVDARSYWLALAAMVASVIAAVLYLRIVVAMYLSGGDHDGEEPVEGPRVSIPLPAGTAIGIAIVATIAIGILPGYLIEVARDAVPVL 509 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94721.21856.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig94721.21856.1 >prot_M-pyrifera_M_contig94721.21856.1 ID=prot_M-pyrifera_M_contig94721.21856.1|Name=mRNA_M-pyrifera_M_contig94721.21856.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=186bp MLAYSSISHAGFILVGVQAATDRGVAAVVFYVAAYTFMVVGSFGVLSIVSback to top mRNA from alignment at M-pyrifera_M_contig94721:168..737- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig94721.21856.1 ID=mRNA_M-pyrifera_M_contig94721.21856.1|Name=mRNA_M-pyrifera_M_contig94721.21856.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=570bp|location=Sequence derived from alignment at M-pyrifera_M_contig94721:168..737- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig94721:168..737- >mRNA_M-pyrifera_M_contig94721.21856.1 ID=mRNA_M-pyrifera_M_contig94721.21856.1|Name=mRNA_M-pyrifera_M_contig94721.21856.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1116bp|location=Sequence derived from alignment at M-pyrifera_M_contig94721:168..737- (Macrocystis pyrifera P11B4 male)back to top |