mRNA_M-pyrifera_M_contig91865.21266.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig91865.21266.1 vs. uniprot
Match: UPI001ED86DD1 (probable ATP-dependent DNA helicase HFM1 isoform X1 n=5 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED86DD1) HSP 1 Score: 123 bits (308), Expect = 3.420e-28 Identity = 76/247 (30.77%), Postives = 131/247 (53.04%), Query Frame = 1 Query: 43 VHSCEQGRIMAHCCIDFDTMKAMSELNADSTMCDVLIVLSRAKEVSSSTLRRAEKSSLNEL-----HALVRYPLEQESSSKRRKKPKLKRIQSNSEKIFVLIQAVLGSLEIKDPALRQE-------GQHIMAALGRVLSGLAMSLIDKQHYSPLKCALQLQQSVAQKVWFDSQHLVRQLEGIGQKFSSLLTGVGLGTFEAIQQAAPYRIETVLSRRPPFGSKVKESLAKIWPEFRLTATVKGRTLTV 747 + + E GR+MA C+ +TMK ++ T+ D++ ++ ++ E S LR +E+ LN L H +RYP+ R+++ KI +LIQAVLG L+I+D L QE GQ + ++ + K +Y L +L+L + + ++W DS + RQL+ IG ++ LL G +F A++ A+P IE +L++ PPFG+ +K+ + + PE++LTA G +T+ Sbjct: 561 IKATEMGRLMARYCVTLETMKLFQKITGTETVIDLIKLICKSAEYSDIQLRTSERKILNCLSKNKGHECIRYPI-------------TTRVKTADHKINILIQAVLGCLQIQDAGLSQECVKIFRIGQRLSKCFCLYITSCWLKKGTKNNYKLLLSSLRLIKCFSSRLWEDSIFVARQLDRIGPSYAGLLAASGRTSFAALRDASPRDIERILNKAPPFGNDIKDFVNHL-PEYKLTADKSGSIVTI 793
BLAST of mRNA_M-pyrifera_M_contig91865.21266.1 vs. uniprot
Match: UPI00148A9505 (probable ATP-dependent DNA helicase HFM1 isoform X1 n=5 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A9505) HSP 1 Score: 119 bits (297), Expect = 1.050e-26 Identity = 75/245 (30.61%), Postives = 130/245 (53.06%), Query Frame = 1 Query: 1 LDSFQMIKLDPSS-RVHSCEQGRIMAHCCIDFDTMKAMSELNADSTMCDVLIVLSRAKEVSSSTLRRAEKSSLNELH-----ALVRYPLEQESSSKRRKKPKLKRIQSNSEKIFVLIQAVLGSLEIKDPALRQEGQHIMAALGRVLSGLAMSLIDKQHYSPLKCALQLQQSVAQKVWFDSQHLVRQLEGIGQKFSSLLTGVGLGTFEAIQQAAPYRIETVLSRRPPFGSKVKESLAKIWPEFRLT 717 L++ MI +D + V S E G++MA CI F+TM+ S+L A T ++L + E S LR EK +LN + VR+P+ ++++ K+ +LIQ LG L ++D +L+Q+ I A R+ L L K Y L ++L + + ++W DS+H+ +QL+GIG S+ L G+ TF+ I P +E +++R PPFG+++++ ++ + P++ LT Sbjct: 697 LNTHGMITMDDETIDVKSTEPGKLMARYCIAFETMRRFSKLGATETTAELLYEMCGCDEFSEVQLRNKEKKTLNTFNRDKNRVTVRFPV-------------TGKVKTKQMKVNILIQVALGCLLLQDFSLQQDTTRIFRAAQRMSRCLVELLWLKDEYKSLLSGVRLMKCLKARLWEDSRHVSKQLDGIGPALSNALVNAGMTTFQKISDTNPRELELIVNRHPPFGNQMRDMVSGL-PKYELT 927
BLAST of mRNA_M-pyrifera_M_contig91865.21266.1 vs. uniprot
Match: A0A7R9XA22_9CRUS (Hypothetical protein (Fragment) n=1 Tax=Argulus foliaceus TaxID=509924 RepID=A0A7R9XA22_9CRUS) HSP 1 Score: 116 bits (290), Expect = 8.180e-26 Identity = 70/223 (31.39%), Postives = 123/223 (55.16%), Query Frame = 1 Query: 61 GRIMAHCCIDFDTMKAMSELNADSTMCDVLIVLSRAKEVSSSTLRRAEKSSLNELHA-----LVRYPLEQESSSKRRKKPKLKRIQSNSEKIFVLIQAVLGSLEIKDPALRQEGQHIMAALGRVLSGLAMSLIDKQHYSPLKCALQLQQSVAQKVWFDSQHLVRQLEGIGQKFSSLLTGVGLGTFEAIQQAAPYRIETVLSRRPPFGSKVKESLAKIWPEFRL 714 G +M C+ F+TMK ++L D + D+L LS KE LR +EK +LN L+ +RYP++ R+++ ++K++VL+QAVLG L I DP+L Q+ +++ R+ L+ ++ Y + L + + K+W DS +++RQL+ +G SS L VG TF+ ++ P IE V++R+PPFG+ ++ + + + P++ L Sbjct: 583 GCLMTRYCVAFETMKKFNKLRGDELIYDLLEKLSECKEYEEIQLRTSEKKALNSLNKDKTNPSIRYPIKG-------------RVKTKAQKVYVLLQAVLGCLTINDPSLIQDSNNVIRLGQRLTRCLSEYVLSSSSYRLSINTVTLAKCLQAKLWDDSVYVIRQLDKVGPAISSALCHVGTTTFQQLENMNPRDIEIVVNRQPPFGNTLQAAASHL-PKYEL 791
BLAST of mRNA_M-pyrifera_M_contig91865.21266.1 vs. uniprot
Match: UPI001B351B68 (LOW QUALITY PROTEIN: probable ATP-dependent DNA helicase HFM1 n=2 Tax=Ochotona TaxID=9977 RepID=UPI001B351B68) HSP 1 Score: 115 bits (289), Expect = 1.200e-25 Identity = 79/244 (32.38%), Postives = 130/244 (53.28%), Query Frame = 1 Query: 1 LDSFQMIKLDPSSRVHSCEQGRIMAHCCIDFDTMKAMSELNADSTMCDVLIVLSRAKEVSSSTLRRAEKSSLNELHA-----LVRYPLEQESSSKRRKKPKLKRIQSNSEKIFVLIQAVLGSLEIKDPALRQEGQHIMAALGRVLSGLA-MSLIDKQHYSPLKCALQLQQSVAQKVWFDSQHLVRQLEGIGQKFSSLLTGVGLGTFEAIQQAAPYRIETVLSRRPPFGSKVKESLAKIWPEFRL 714 L S ++IK+D + E GR+MA I FDT+K ++N T+ D++ +++ KE LR +EK +LN L+ +R+P+E RI++ K+ LIQA LG + I+D AL Q+ I RV L+ +Q ++ L +L L + K+W +S H+ +QLE IG S+ + GL +F+ I++ +E VLSR PPFG+++KE++ + P++ L Sbjct: 760 LSSLELIKMDENVNFKPTEAGRLMAWYYITFDTVKKFRKINGTETLSDLITMIASCKEFLDIQLRISEKKTLNTLNKDANRITIRFPMEG-------------RIKTREMKVNCLIQAQLGCIPIQDFALTQDIAKIFRTGSRVTRWLSDFVAAQEQKFTILLNSLILAKCFRCKLWENSLHVSKQLEKIGVTLSNAMVNAGLTSFKRIEETDARELELVLSRHPPFGTQIKETVTHL-PKYEL 989
BLAST of mRNA_M-pyrifera_M_contig91865.21266.1 vs. uniprot
Match: A0A1D1V7A7_RAMVA (Uncharacterized protein n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1V7A7_RAMVA) HSP 1 Score: 113 bits (282), Expect = 9.490e-25 Identity = 74/227 (32.60%), Postives = 122/227 (53.74%), Query Frame = 1 Query: 58 QGRIMAHCCIDFDTMKAMSELNADSTMCDVLIVLSRAKEVSSSTLRRAEKSSLNELHA------LVRYPLEQESSSKRRKKPKLKRIQSNSEKIFVLIQAVLGSLEIKDPALRQEGQHIMAALGRVLSGLAMSLIDKQHYSPLKCA-LQLQQSVAQKVWFDSQHLVRQLEGIGQKFSSLLTGVGLGTFEAIQQAAPYRIETVLSRRPPFGSKVKESLAKIWPEFRLT 717 +G +MA I FDTM L T+ +++ LS+AKE + TLR EK +LN L+ +R+P++ +IQS + K+ LIQA LGSL + DP L + I + RV+S L + L + +QL + + ++W +S H+ RQ+ GIG S L G TF +++QA P +E +++RRPPFG+++ + ++++ P++ LT Sbjct: 545 KGSLMAKYYIAFDTMVLFGTLTGKETIAELVDALSKAKEFADVTLRVNEKMALNTLNRNKNAVPTIRFPMKG-------------KIQSTAMKVNCLIQAALGSLPVTDPGLSMDTNKIFRSAKRVMSCLVAYVRSSNVGFKLSISTIQLAKCLEARMWENSDHVARQITGIGATLSVSLVNAGYTTFSSMEQANPRELELIVNRRPPFGNRIVDVVSRL-PKYILT 757
BLAST of mRNA_M-pyrifera_M_contig91865.21266.1 vs. uniprot
Match: A0A2Z7BHM6_9LAMI (Uncharacterized protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BHM6_9LAMI) HSP 1 Score: 113 bits (282), Expect = 9.770e-25 Identity = 80/255 (31.37%), Postives = 136/255 (53.33%), Query Frame = 1 Query: 46 HSCEQGRIMAHCCIDFDTMKAMSELNADSTMCDVLIVLSRAKEVSSSTLRRAEKSSLN----ELHALVRYPLEQESSSKRRKKPKLKRIQSNSEKIFVLIQAVL-GSLEIKDPALRQEGQHIMAALGRVLSGLAMSLIDKQHYSPLKCALQLQQSVAQKVWFDSQHLVRQLEGIGQKFSSLLTGVGLGTFEAIQQAAPYRIETVLSRRPPFGSKVKESLAKIWPEFRLTATV-----KGR-----TLTVVAEPHN 765 H E GR+M + FDTMK + + A+ ++ DVL ++ +A+E+S LRR EK LN E +R+ + + ++ KRIQ+ EKIFVL+ L G + D ++ Q+ + + R+ + + K+ Y + L + + QK+W DSQ+L++QL GIG + L +G+ +FEA+ +A P +IE + R+ P+G+ +KESL + P+ + +G+ TLT ++ PHN Sbjct: 480 HLQEPGRLMTKYYLKFDTMKHIIQAPANCSIEDVLHIICQAEEISWIQLRRNEKKFLNCINNERDGRLRFHVLDDKGKRK------KRIQTREEKIFVLVNDCLTGDPLVHDLSMSQDMNSVCSNGCRIAKCMKEYFLYKKSYRGALNSTLLAKCLHQKLWDDSQYLLKQLPGIGMVTAKALLSMGIRSFEALSEADPRKIELITGRKYPYGNHIKESLLSLPPKVEMVVKETDGQKQGKSKLLLTLTRLSHPHN 728
BLAST of mRNA_M-pyrifera_M_contig91865.21266.1 vs. uniprot
Match: A0A218WCR5_PUNGR (Helicase ATP-binding domain-containing protein n=3 Tax=Punica granatum TaxID=22663 RepID=A0A218WCR5_PUNGR) HSP 1 Score: 108 bits (269), Expect = 5.150e-23 Identity = 75/228 (32.89%), Postives = 128/228 (56.14%), Query Frame = 1 Query: 46 HSCEQGRIMAHCCIDFDTMKAMSELNADSTMCDVLIVLSRAKEVSSSTLRRAEKSSLNELHA----LVRYPLEQESSSKRRKKPKLKRIQSNSEKIFVLIQAVL-GSLEIKDPALRQEGQHIMAALGRVLSGLAMSLIDKQHYSPLKCALQLQQSVAQKVWFDSQHLVRQLEGIGQKFSSLLTGVGLGTFEAIQQAAPYRIETVLSRRPPFGSKVKESLAKIWPEFRL 714 H E GR+M + F+TMK + + A ++ D L ++S+A+E++ LRR EK LN+++ +R+ + + KPK KRIQ+ EKIFVL L G + D ++ Q+ I + R+ + I K+ Y+ + + +S+ QK+W +SQ+L++QL GIG + L +G+ +FE + +A P +IE V R+ PFG+++KESL + P+ + Sbjct: 423 HMQEPGRLMTKYYLRFNTMKYIMQAPASCSLEDALRIVSQAEEIAWIQLRRNEKKLLNDINIDKNRRLRFHVLGDKG-----KPK-KRIQTTEEKIFVLANDFLTGDPLVHDLSMTQDMNSICSNGCRIAKCMKEYFIHKKSYTGALNSTLIAKSLYQKLWDNSQYLLKQLPGIGMVTAKALHSMGIDSFEKLAEADPRKIEIVTGRKYPFGNQIKESLQSLPPKVEM 644
BLAST of mRNA_M-pyrifera_M_contig91865.21266.1 vs. uniprot
Match: V2XKC9_MONRO (Dead deah box dna helicase n=1 Tax=Moniliophthora roreri (strain MCA 2997) TaxID=1381753 RepID=V2XKC9_MONRO) HSP 1 Score: 107 bits (266), Expect = 1.330e-22 Identity = 72/222 (32.43%), Postives = 118/222 (53.15%), Query Frame = 1 Query: 28 DPSSRVHSCEQGRIMAHCCIDFDTMKAMSELNADSTMCDVLIVLSRAKEVSSSTLRRAEKSSLNEL--HALVRYPLEQESSSKRRKKPKLKRIQSNSEKIFVLIQAVLGSLEIKDPALRQ-------EGQHIMAALGRVLSGLAMSLIDKQHYSPLKCALQLQQSVAQKVWFDSQHLVRQLEGIGQKFSSLLTGVGLGTFEAIQQAAPYRIETVLSRRPPFG 666 D S + S E G IM+ I TM ++ L +M VL +S A+E++ S LR +E+S+ N L H +R+ ++K+++ S+KIF+LIQAVLG + + DP + E ++ L R+ + I ++ + LKC L+L + + K W D ++RQLE IG+K +L G+ + E +++ RIET+L+R+PPFG Sbjct: 556 DKPSALRSTEYGDIMSKFYIRQTTMCSILALPEHVSMRTVLEAISAAQELADSKLRSSERSAFNSLRKHNDIRF--------------EVKKLEKTSDKIFILIQAVLGGISLNDPEYKSGDSQMHLEAFNVFRHLPRIARAVVEVAITRKRGAQLKCGLELLRCFSAKAWEDRPVVLRQLESIGEKSIKVLAEHGITSLEILRKQDALRIETLLNRKPPFG 763
BLAST of mRNA_M-pyrifera_M_contig91865.21266.1 vs. uniprot
Match: A0A0W0FPS8_9AGAR (Uncharacterized protein n=1 Tax=Moniliophthora roreri TaxID=221103 RepID=A0A0W0FPS8_9AGAR) HSP 1 Score: 107 bits (266), Expect = 1.420e-22 Identity = 72/222 (32.43%), Postives = 118/222 (53.15%), Query Frame = 1 Query: 28 DPSSRVHSCEQGRIMAHCCIDFDTMKAMSELNADSTMCDVLIVLSRAKEVSSSTLRRAEKSSLNEL--HALVRYPLEQESSSKRRKKPKLKRIQSNSEKIFVLIQAVLGSLEIKDPALRQ-------EGQHIMAALGRVLSGLAMSLIDKQHYSPLKCALQLQQSVAQKVWFDSQHLVRQLEGIGQKFSSLLTGVGLGTFEAIQQAAPYRIETVLSRRPPFG 666 D S + S E G IM+ I TM ++ L +M VL +S A+E++ S LR +E+S+ N L H +R+ ++K+++ S+KIF+LIQAVLG + + DP + E ++ L R+ + I ++ + LKC L+L + + K W D ++RQLE IG+K +L G+ + E +++ RIET+L+R+PPFG Sbjct: 1482 DKPSALRSTEYGDIMSKFYIRQTTMCSILALPEHVSMRTVLEAISAAQELADSKLRSSERSAFNSLRKHNDIRF--------------EVKKLEKTSDKIFILIQAVLGGISLNDPEYKSGDSQMHLEAFNVFRHLPRIARAVVEVAITRKRGAQLKCGLELLRCFSAKAWEDRPVVLRQLESIGEKSIKVLAEHGITSLEILRKQDALRIETLLNRKPPFG 1689
BLAST of mRNA_M-pyrifera_M_contig91865.21266.1 vs. uniprot
Match: A0A2I0JG04_PUNGR (Uncharacterized protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0JG04_PUNGR) HSP 1 Score: 106 bits (265), Expect = 1.660e-22 Identity = 74/225 (32.89%), Postives = 127/225 (56.44%), Query Frame = 1 Query: 55 EQGRIMAHCCIDFDTMKAMSELNADSTMCDVLIVLSRAKEVSSSTLRRAEKSSLNELHA----LVRYPLEQESSSKRRKKPKLKRIQSNSEKIFVLIQAVL-GSLEIKDPALRQEGQHIMAALGRVLSGLAMSLIDKQHYSPLKCALQLQQSVAQKVWFDSQHLVRQLEGIGQKFSSLLTGVGLGTFEAIQQAAPYRIETVLSRRPPFGSKVKESLAKIWPEFRL 714 E GR+M + F+TMK + + A ++ D L ++S+A+E++ LRR EK LN+++ +R+ + + KPK KRIQ+ EKIFVL L G + D ++ Q+ I + R+ + I K+ Y+ + + +S+ QK+W +SQ+L++QL GIG + L +G+ +FE + +A P +IE V R+ PFG+++KESL + P+ + Sbjct: 536 EPGRLMTKYYLRFNTMKYIMQAPASCSLEDALRIVSQAEEIAWIQLRRNEKKLLNDINIDKNRRLRFHVLGDKG-----KPK-KRIQTTEEKIFVLANDFLTGDPLVHDLSMTQDMNSICSNGCRIAKCMKEYFIHKKSYTGALNSTLIAKSLYQKLWDNSQYLLKQLPGIGMVTAKALHSMGIDSFEKLAEADPRKIEIVTGRKYPFGNQIKESLQSLPPKVEM 754 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91865.21266.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig91865.21266.1 >prot_M-pyrifera_M_contig91865.21266.1 ID=prot_M-pyrifera_M_contig91865.21266.1|Name=mRNA_M-pyrifera_M_contig91865.21266.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=250bp MIKLDPSSRVHSCEQGRIMAHCCIDFDTMKAMSELNADSTMCDVLIVLSRback to top mRNA from alignment at M-pyrifera_M_contig91865:8..772+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig91865.21266.1 ID=mRNA_M-pyrifera_M_contig91865.21266.1|Name=mRNA_M-pyrifera_M_contig91865.21266.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=765bp|location=Sequence derived from alignment at M-pyrifera_M_contig91865:8..772+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig91865:8..772+ >mRNA_M-pyrifera_M_contig91865.21266.1 ID=mRNA_M-pyrifera_M_contig91865.21266.1|Name=mRNA_M-pyrifera_M_contig91865.21266.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1500bp|location=Sequence derived from alignment at M-pyrifera_M_contig91865:8..772+ (Macrocystis pyrifera P11B4 male)back to top |