mRNA_M-pyrifera_M_contig91793.21256.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig91793.21256.1 vs. uniprot
Match: UPI0004F43115 (cytosolic malate dehydrogenase n=1 Tax=Trypanosoma grayi TaxID=71804 RepID=UPI0004F43115) HSP 1 Score: 232 bits (591), Expect = 7.820e-72 Identity = 133/267 (49.81%), Postives = 170/267 (63.67%), Query Frame = 1 Query: 4 VARGLMFGPSQRVRVHLFDLAAMRDRMEGVRMELEDVGESLVDEVVVSVDAEEAFRGVDYALLVGAKPRGKGMERKDLLVENAAIFVEQGRLLGRFS-PACKVLVVGNPANTNAF-LVGASGDALDRRNITALTRLDQNRLEGMVKCRRSKGGGQRGGVVGCVVWGNHSATQVGDVSGCE-------EAVAMGLVEDEAFARTLQQRGKAVIEKRGLSSALSAAMAICDHMRDWVLGS-RGKAVSMGVWSEGNPYGIDPRLVFSFPV 774 +A G M GPSQ V+++L D+ +EGV+ EL D G +L+D+VV++ D + AF+ VD A+L G+ PR GMERKDLL NA IF EQGR+LG + P C V VVGNPANTNA L+ AS L N+TALTRLD NR ++ R GV C++WGNHS TQV D++ A+ G D+ F T+QQRG +I+ RGLSSALSAA AI DH+ DW+LG+ G VSM V S+ NPYG+ L+FSFPV Sbjct: 27 IASGRMLGPSQHVQLNLLDIEPAMKALEGVQAELVDCGYTLLDKVVITSDQKVAFKNVDVAILCGSFPRKAGMERKDLLQINAKIFAEQGRVLGEVAAPDCHVCVVGNPANTNALILLQASQGKLKPTNVTALTRLDHNRATALLAARADA---SVEGVKNCIIWGNHSGTQVPDINSARVKGKPARAALEPGAFRDDEFIATVQQRGAEIIKLRGLSSALSAAKAITDHVHDWMLGTPEGTHVSMAVCSDNNPYGVPAGLIFSFPV 290
BLAST of mRNA_M-pyrifera_M_contig91793.21256.1 vs. uniprot
Match: L1JY01_GUITC (Malate dehydrogenase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JY01_GUITC) HSP 1 Score: 228 bits (580), Expect = 4.370e-70 Identity = 129/269 (47.96%), Postives = 168/269 (62.45%), Query Frame = 1 Query: 4 VARGLMFGPSQRVRVHLFDLAAMRDRMEGVRMELEDVGESLVDEVVVSVDAEEAFRGVDYALLVGAKPRGKGMERKDLLVENAAIFVEQGRLLGRF-SPACKVLVVGNPANTNAFLVGASGDALDRRNITALTRLDQNRLEGMVKCRRSKGGGQRGGVVGCVVWGNHSATQVGDVSGCEEAVAMG------LVEDEA-----FARTLQQRGKAVIEKRGLSSALSAAMAICDHMRDWVLGSRGKAVSMGVWSEGNPYGIDPRLVFSFPV 774 + G FGPS ++ +HL D+ + + GV+MELED G L++EVVV+ DA AF G+D +++GA PRG GMERKDLL +N IF EQGRLL S KV+VVGNPANTNA + ++ + N TALTRLD NR + + R V C +WGNHS+TQ DVS A A G ++++ F + +QQRG A+I R LSSA+SAA AI DHM DWV+GS GK VSM V S+G+ YGI+ L++SFPV Sbjct: 20 ICSGRTFGPSTKIILHLLDIPRAQQALMGVKMELEDCGFDLLEEVVVTSDANVAFTGIDACIMLGAFPRGPGMERKDLLAKNCNIFKEQGRLLNEVASKNVKVVVVGNPANTNALVAQQCAPSIPKENFTALTRLDHNRAQSQIAMRLKV---PSSAVENCTIWGNHSSTQYPDVSNSVVATAQGKQKVGDVIQNPGYLHGEFIKVVQQRGAAIINARKLSSAMSAAKAISDHMHDWVVGSNGKTVSMAVPSDGS-YGIEKGLIYSFPV 284
BLAST of mRNA_M-pyrifera_M_contig91793.21256.1 vs. uniprot
Match: A0A2G6N2D8_9DELT (Malate dehydrogenase n=2 Tax=Desulfobacterales TaxID=213118 RepID=A0A2G6N2D8_9DELT) HSP 1 Score: 223 bits (568), Expect = 1.970e-68 Identity = 132/264 (50.00%), Postives = 161/264 (60.98%), Query Frame = 1 Query: 4 VARGLMFGPSQRVRVHLFDLAAMRDRMEGVRMELEDVGESLVDEVVVSVDAEEAFRGVDYALLVGAKPRGKGMERKDLLVENAAIFVEQGRLLG-RFSPACKVLVVGNPANTNAFLVGASGDALDRRNITALTRLDQNRLEGMVKCRRSKGGGQRGGVVGCVVWGNHSATQVGDVSGC--EEAVAMGLVED----EAFARTLQQRGKAVIEKRGLSSALSAAMAICDHMRDWVLGSRGKAVSMGVWSEGNPYGIDPRLVFSFPV 774 +A G M GP Q V + L ++ D + GV MEL D LV VV + DA AF+ D+A+LVGA+PRG GMER DLL NAAIF QG+ + S KVLVVGNPANTNA + + +D RNITA+ RLD NR + K G V VVWGNHSATQ D+S + A LV+D + F +QQRG A+I+ RG SSA SAA A DHMR W LGS GK VSMGV S+GNPYGID +++SFP+ Sbjct: 24 IASGSMLGPDQPVILQLLEIPPAMDALNGVVMELNDCAFPLVAGVVATDDANVAFKDADFAILVGARPRGPGMERSDLLEANAAIFSAQGKAINDNASKDIKVLVVGNPANTNALITQKNAPDIDPRNITAMMRLDHNRAMSQLA---EKTGAHSTDVEQMVVWGNHSATQYPDISYATVKGEAAKSLVDDAWNVDTFIPVVQQRGAAIIKARGASSAASAASAAVDHMRSWALGSEGKWVSMGVTSKGNPYGIDEDIIYSFPI 284
BLAST of mRNA_M-pyrifera_M_contig91793.21256.1 vs. uniprot
Match: G0UD31_TRYVY (Malate dehydrogenase n=1 Tax=Trypanosoma vivax (strain Y486) TaxID=1055687 RepID=G0UD31_TRYVY) HSP 1 Score: 222 bits (566), Expect = 3.830e-68 Identity = 132/268 (49.25%), Postives = 166/268 (61.94%), Query Frame = 1 Query: 1 LVARGLMFGPSQRVRVHLFDLAAMRDRMEGVRMELEDVGESLVDEVVVSVDAEEAFRGVDYALLVGAKPRGKGMERKDLLVENAAIFVEQGRLLGRF-SPACKVLVVGNPANTNAF-LVGASGDALDRRNITALTRLDQNRLEGMVKCRRSKGGGQRGGVVGCVVWGNHSATQVGDVSGC-------EEAVAMGLVEDEAFARTLQQRGKAVIEKRGLSSALSAAMAICDHMRDWVLGSR-GKAVSMGVWSEGNPYGIDPRLVFSFPV 774 L+A G M G Q V++ L D+ + +EGVR EL D L+D V+++ D + AF D A+ GA PR GMERKDLL NA IF EQGR+LG SP CKV VVGNPANTNA L+ AS ++ +N+TALTRLD NR +V R + V CV+WGNHS TQV D++ EA+ D F + +Q+RG ++ RGLSSALSAA AI DH+RDW+LG+ G VSM V S+GNPYGI L+FSFPV Sbjct: 22 LIASGRMLGEDQHVQLQLLDITPSQKALEGVRAELHDCAFPLLDNVIITDDPKVAFDRADVAIFCGAFPRKPGMERKDLLQTNAKIFSEQGRVLGEVASPGCKVCVVGNPANTNALVLLRASQGKINPKNVTALTRLDHNRATALVAQRARS---RVDTVKNCVIWGNHSGTQVPDLNNATVGGIAAREALKDDAFIDNDFMKRVQERGAEIMNLRGLSSALSAAKAITDHVRDWLLGTPVGTFVSMAVLSDGNPYGIPNGLIFSFPV 286
BLAST of mRNA_M-pyrifera_M_contig91793.21256.1 vs. uniprot
Match: UPI001966BFD2 (malate dehydrogenase n=1 Tax=Desulfogranum marinum TaxID=453220 RepID=UPI001966BFD2) HSP 1 Score: 222 bits (566), Expect = 3.940e-68 Identity = 128/264 (48.48%), Postives = 162/264 (61.36%), Query Frame = 1 Query: 4 VARGLMFGPSQRVRVHLFDLAAMRDRMEGVRMELEDVGESLVDEVVVSVDAEEAFRGVDYALLVGAKPRGKGMERKDLLVENAAIFVEQGRLLG-RFSPACKVLVVGNPANTNAFLVGASGDALDRRNITALTRLDQNRLEGMVKCRRSKGGGQRGGVVGCVVWGNHSATQVGDVSGC--EEAVAMGLVED----EAFARTLQQRGKAVIEKRGLSSALSAAMAICDHMRDWVLGSRGKAVSMGVWSEGNPYGIDPRLVFSFPV 774 +A G M GP Q V + L ++ + GV MEL D LV +V + DA AF+ +D+ LLVG++PRG GMER DLL NA IF QG+ L P K+LVVGNPANTNA + + L+ RNITA+ RLD NR + + K G + VVWGNHSATQ D+S + A GLV+D + F +QQRG A+I+ RG SSA SAA A DHMRDW LGS GK VSMGV+S GNPYGID ++++FP+ Sbjct: 24 IASGSMLGPDQPVILQLLEIPPAMGALNGVVMELNDCAFPLVAGIVATDDANVAFKDIDFGLLVGSRPRGPGMERSDLLEANAQIFSAQGKALNDNAKPDVKILVVGNPANTNALITLKNAPDLNPRNITAMMRLDHNRAKSQLA---EKTGAHANDIEQMVVWGNHSATQYPDISYATVKGEAAKGLVDDAWNVDNFIPVVQQRGAAIIKARGASSAASAASAAVDHMRDWALGSEGKWVSMGVYSAGNPYGIDEDIIYAFPI 284
BLAST of mRNA_M-pyrifera_M_contig91793.21256.1 vs. uniprot
Match: UPI001966B925 (malate dehydrogenase n=1 Tax=Desulfobulbus rhabdoformis TaxID=34032 RepID=UPI001966B925) HSP 1 Score: 222 bits (566), Expect = 4.060e-68 Identity = 126/264 (47.73%), Postives = 162/264 (61.36%), Query Frame = 1 Query: 4 VARGLMFGPSQRVRVHLFDLAAMRDRMEGVRMELEDVGESLVDEVVVSVDAEEAFRGVDYALLVGAKPRGKGMERKDLLVENAAIFVEQGRLLG-RFSPACKVLVVGNPANTNAFLVGASGDALDRRNITALTRLDQNRLEGMVKCRRSKGGGQRGGVVGCVVWGNHSATQVGDVS--GCEEAVAMGLVED----EAFARTLQQRGKAVIEKRGLSSALSAAMAICDHMRDWVLGSRGKAVSMGVWSEGNPYGIDPRLVFSFPV 774 +A G M GP Q V + L ++ ++GV MEL D LV +V+ + D AF+ ++ALLVG++PRG GMER DLL N AIF QG+ L +P C+VLVVGNPANTNA + + L+ RN+TA+ RLD NR + K G V VVWGNHSATQ D+S + LV+D + F T+QQRG A+I+ RG SSA SAA A DHMR W LGS GK VSMG++S GNPYG+D L+F+FP+ Sbjct: 24 IASGSMLGPDQPVILQLLEIPPAMGALQGVLMELNDCAFPLVADVIATDDPNVAFKDAEFALLVGSRPRGPGMERSDLLDANGAIFTVQGKALSDNANPNCRVLVVGNPANTNALICMKNAPKLNPRNVTAMMRLDHNRAMSQIA---EKAGSHSTKVEKVVVWGNHSATQYPDISYASVDGKAVKDLVDDAWNKDYFIPTVQQRGAAIIKARGASSAASAASAAVDHMRSWALGSEGKWVSMGIYSAGNPYGVDEDLMFAFPI 284
BLAST of mRNA_M-pyrifera_M_contig91793.21256.1 vs. uniprot
Match: A0A2L1GMP3_9DELT (Malate dehydrogenase n=1 Tax=Desulfobulbus oralis TaxID=1986146 RepID=A0A2L1GMP3_9DELT) HSP 1 Score: 222 bits (565), Expect = 5.740e-68 Identity = 129/264 (48.86%), Postives = 167/264 (63.26%), Query Frame = 1 Query: 4 VARGLMFGPSQRVRVHLFDLAAMRDRMEGVRMELEDVGESLVDEVVVSVDAEEAFRGVDYALLVGAKPRGKGMERKDLLVENAAIFVEQGRLLG-RFSPACKVLVVGNPANTNAFLVGASGDALDRRNITALTRLDQNRLEGMVKCRRSKGGGQRGGVVGCVVWGNHSATQVGDVSGCEEA---VAMGLVED---EAFARTLQQRGKAVIEKRGLSSALSAAMAICDHMRDWVLGSRGKAVSMGVWSEGNPYGIDPRLVFSFPV 774 +A G M GP Q V + L ++ + ++GV MEL+D LV V+ S D AF+ D+ALLVG++PRG GMER DLL N AIF QG+ L +P C+VLVVGNPANTNA ++ S L+ R+IT++TRLD NR + K G V VVWGNHS+TQ D+S A V + +D F T+Q+RG A+I+ RG SSA SAA A +HMRDW LGS+G+ VSMGV+S+GNPYGID L+FSFP+ Sbjct: 24 IASGSMLGPDQPVILQLLEIPPAMNALQGVLMELKDCAFPLVAGVIPSDDPNVAFKDADFALLVGSRPRGPGMERSDLLKANGAIFTVQGKALSDHANPDCRVLVVGNPANTNALILLKSAPKLNPRHITSMTRLDHNRSMAQIA---DKVGCHSSDVEQVVVWGNHSSTQYPDISYATAAGKPVRTAVADDWYKNDFIPTVQKRGAAIIKARGASSAASAANAAVEHMRDWALGSKGQWVSMGVYSKGNPYGIDEDLMFSFPI 284
BLAST of mRNA_M-pyrifera_M_contig91793.21256.1 vs. uniprot
Match: A0A7S1MMC8_NEODS (Malate dehydrogenase n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1MMC8_NEODS) HSP 1 Score: 222 bits (566), Expect = 6.110e-68 Identity = 129/270 (47.78%), Postives = 166/270 (61.48%), Query Frame = 1 Query: 4 VARGLMFGPSQRVRVHLFDLAAMRDRMEGVRMELEDVGESLVDEVVVSVDAEEAFRGVDYALLVGAKPRGKGMERKDLLVENAAIFVEQGRLLGRF-SPACKVLVVGNPANTNAFLVGASGD-ALDRRNITALTRLDQNRLEGMVKCRRSKGGGQRGG--VVGCVVWGNHSATQVGDVSGCEEAVAMGLVE--------DEAFARTLQQRGKAVIEKRGLSSALSAAMAICDHMRDWVLGS-RGKAVSMGVWSEGNPYGIDPRLVFSFPV 774 +ARGLMFGP Q+V + L ++ ++ + GV MELED + VV + D AF D A++ GA PR GMERKDLL NA IF EQG+++G S C+V+VVGNPANTNA L+ + D ++D R +TALTRLD NR + G++ G V ++WGNHS TQV DV+ A L E D F +QQRG A+I+ RGLSSA SAA AI DH+ DW+LG+ G VSM VWS GNPYG+ L++SFPV Sbjct: 40 IARGLMFGPEQKVELALLEVEPAQNALRGVAMELEDCAFPTLANVVCTADPRVAFANADVAVMCGAFPRKDGMERKDLLQMNAKIFSEQGKIIGEVASKHCRVVVVGNPANTNALLLALAADGSIDPRQVTALTRLDHNRAIALA--------GRKAGAPVKNAIIWGNHSGTQVPDVNSAVVADGAALREVAKADDYFDGEFIPEVQQRGAAIIKARGLSSAASAAKAIVDHVHDWILGTPEGTFVSMAVWSNGNPYGVPENLIYSFPV 301
BLAST of mRNA_M-pyrifera_M_contig91793.21256.1 vs. uniprot
Match: A0A812VG83_9DINO (Malate dehydrogenase n=3 Tax=Sar TaxID=2698737 RepID=A0A812VG83_9DINO) HSP 1 Score: 220 bits (561), Expect = 1.480e-67 Identity = 137/272 (50.37%), Postives = 165/272 (60.66%), Query Frame = 1 Query: 1 LVARGLMFGPSQRVRVHLFDLAAMRDRMEGVRMELEDVGESLVDEVVVSVDAEEAFRGVDYALLVGAKPRGKGMERKDLLVENAAIFVEQGRLLGRF-SPACKVLVVGNPANTNAFLVGASGDALDRRNITALTRLDQNRLEGMVKCRRSKGGGQRGGVVGCVVWGNHSATQVGDVSGCE-------EAVAMGLVE------DEAFARTLQQRGKAVIEKRGLSSALSAAMAICDHMRDWVLGSRGKAVSMGVWSEGNPYGIDPRLVFSFPV 774 ++ARG +FG + V + L D+ A D++ V MEL+DV V + D EAF D ALLVGA+PRG GM RKDLL NA IF QG +L S CKV+VVGNPANTNA L S +L +RN TALTRLDQNR GM+ +K G + V+WGNHSATQV V+ E VA L E E +QQRGK VI RG SSA SAA AICDH+RDWV+GS G+ VSM V S+GNP+G+ L+FSFPV Sbjct: 1 MIARGGVFG-DRAVDLRLLDIEAASDKLRAVGMELQDVASPFVLRCTCTTDPLEAFMDADVALLVGARPRGPGMLRKDLLAANAGIFKAQGAVLDEVASRDCKVVVVGNPANTNALLCMRSAPSLPKRNFTALTRLDQNRTAGMLA---AKIGVPVSTIRNAVIWGNHSATQVPMVTFATVEEGRAVETVAARLGEGGERWVSEELVPGVQQRGKEVIAARGASSAASAASAICDHIRDWVMGSDGRVVSMAVSSDGNPFGVREGLIFSFPV 268
BLAST of mRNA_M-pyrifera_M_contig91793.21256.1 vs. uniprot
Match: A0A6P6XR82_DERPT (Malate dehydrogenase n=1 Tax=Dermatophagoides pteronyssinus TaxID=6956 RepID=A0A6P6XR82_DERPT) HSP 1 Score: 220 bits (561), Expect = 2.370e-67 Identity = 129/265 (48.68%), Postives = 163/265 (61.51%), Query Frame = 1 Query: 1 LVARGLMFGPSQRVRVHLFDLAAMRDRMEGVRMELEDVGESLVDEVVVSVDAEEAFRGVDYALLVGAKPRGKGMERKDLLVENAAIFVEQGRLLGRFS-PACKVLVVGNPANTNAFLVGA-SGDALDRRNITALTRLDQNRLEGMVKCRRSKGGGQRGGVVGCVVWGNHSATQVGDVSGCEEAVAMGLV-----EDEAFARTLQQRGKAVIEKRGLSSALSAAMAICDHMRDWVLGSRGKAVSMGVWSEGNPYGIDPRLVFSFPV 774 +VARG +FG Q + +HL D+ M+ ++GV ME+ D LV V+ + D EAF+ +D A LVG+ PR +GMERKDLL N IF QGR L S P KVLVVGNPANTNA + + + RNITA+TRLDQNR + + R S Q + ++WGNHS+TQ D+S A G DE F +T+Q+RG AVI R LSSA+SAA A DHM DW GS G VSMG+ S+GNPYGI ++FSFPV Sbjct: 25 IVARGDVFGRQQSIVLHLLDIPPMKTVLDGVVMEINDCSFPLVQSVIATTDEAEAFKNIDAAFLVGSMPRREGMERKDLLAANVKIFASQGRALANHSKPDVKVLVVGNPANTNALIAAKFASPKIPARNITAMTRLDQNRAQYQLAARHSC---QVSKIQRVIIWGNHSSTQFPDIS---NATLDGQPIKFDGHDEKFIQTIQKRGAAVIAARKLSSAMSAAKAAADHMHDWWNGSNGNWVSMGIISDGNPYGIADGIMFSFPV 283 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91793.21256.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig91793.21256.1 >prot_M-pyrifera_M_contig91793.21256.1 ID=prot_M-pyrifera_M_contig91793.21256.1|Name=mRNA_M-pyrifera_M_contig91793.21256.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=252bp MFGPSQRVRVHLFDLAAMRDRMEGVRMELEDVGESLVDEVVVSVDAEEAFback to top mRNA from alignment at M-pyrifera_M_contig91793:2..775+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig91793.21256.1 ID=mRNA_M-pyrifera_M_contig91793.21256.1|Name=mRNA_M-pyrifera_M_contig91793.21256.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig91793:2..775+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig91793:2..775+ >mRNA_M-pyrifera_M_contig91793.21256.1 ID=mRNA_M-pyrifera_M_contig91793.21256.1|Name=mRNA_M-pyrifera_M_contig91793.21256.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1512bp|location=Sequence derived from alignment at M-pyrifera_M_contig91793:2..775+ (Macrocystis pyrifera P11B4 male)back to top |