mRNA_M-pyrifera_M_contig91691.21239.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig91691.21239.1
Unique NamemRNA_M-pyrifera_M_contig91691.21239.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig91691.21239.1 vs. uniprot
Match: A0A1V9YDJ2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YDJ2_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.080e-14
Identity = 67/248 (27.02%), Postives = 118/248 (47.58%), Query Frame = 1
Query:   10 YSLSSSLLASILIPKRQLCNEAFEIGVDDTLFIGYPTLVQGVSSDDENEVEGGEEEEGEVSGEDALIAFNVSFVC--------------VGRE-EEIVSEFRELARRLSAALLHTNNR-GYLSREVRTILKIREVWVEEQIRIAQLVRAAGQEESEVTIAMARNAHAKLSEDI-------LHVSQFAKELRAIFHSIKANQSVNLALNGWVAYSYVMKERRTAEATAHAHFRPFHALLIVWPDEFLSD 684
            + LSS+L+A +  PK  LCN+ FE+ +DD  F+ +P  +    S                 G      FNV F                V R+ ++ V  + ++A +L+ ALLH  NR G++++EVR +L IR+        IAQ  R   Q   + +   A+ A+ ++  D+       L  S  A +L+A++H ++ + SV++ +N WV  S  + +    + T+    RP+H LL++  ++ + D
Sbjct:   40 HRLSSALVAKLFRPKNALCNQTFELVIDDLRFVSHPVAINVQPS--------------ATQGHRETSMFNVIFALDETKFHMEMMDPSYVRRDHKKRVEAYAQVAAQLANALLHEENRVGFVTKEVRELLHIRD-------EIAQNERVHHQNNMDESGGNAQEAYTEVDFDLQTLIDVALGKSVLANDLKAVYHGLEEDGSVHVVVNRWVQLSLTLHDSNRFDMTS---IRPYHTLLLLTDNDKILD 263          
BLAST of mRNA_M-pyrifera_M_contig91691.21239.1 vs. uniprot
Match: A0A067CA81_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CA81_SAPPC)

HSP 1 Score: 77.8 bits (190), Expect = 5.610e-13
Identity = 64/236 (27.12%), Postives = 115/236 (48.73%), Query Frame = 1
Query:   10 YSLSSSLLASILIPKRQLCNEAFEIGVDDTLFIGYPTLVQGVSSDDENEVEGGEEEEGEVSGEDALIAFNVSFV------------CVGREEEIVSEFRELARRLSAALLHTNNR-GYLSREVRTILKIR-EVWVEEQIR-IAQLVRAAGQEESEVTIAMARNAHAKLSEDILHVSQFAKELRAIFHSIKANQSVNLALNGWVAYSYVMKERRTAEATAHAHFRPFHALLIVWPDE 672
            + LSS+L+A +  PK  LCN+ FE+ +DD  F+ +P  +   S+             G+   E ++  FNV F               G  +  V  + ++A +L+ ALLH  NR G++++EVR +L IR E+   E++  ++  +        E +     +    L +  L  S  A +L+A++H ++ + SV++ LN WV  S  + +    + T+    RP+H LL++  +E
Sbjct:   42 HRLSSALVAKLFRPKNALCNQTFELVIDDLRFVSHPVAINVPSAP----------ASGQAHRETSM--FNVIFALDETKFHMEMDPAPGDHKRKVEAYAQVAAQLANALLHEENRVGFVTKEVRELLHIRDEIAQNERLHHMSSNMDDNSNAPQETSYQEVDSDPQTLIDVALGKSILANDLKAVYHGLEEDGSVHVVLNRWVQLSLTLYDSNRFDITS---IRPYHTLLLLAENE 262          
BLAST of mRNA_M-pyrifera_M_contig91691.21239.1 vs. uniprot
Match: A0A1W0A6X4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6X4_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 7.560e-13
Identity = 60/234 (25.64%), Postives = 115/234 (49.15%), Query Frame = 1
Query:   10 YSLSSSLLASILIPKRQLCNEAFEIGVDDTLFIGYPTLVQGVSSDDENEVEGGEEEEGEVSGEDALIAFNVSFVCVGREEEI--------VSEFRELARRLSAALLHTNNR-GYLSREVRTILKIREVWVEEQIRIAQLVRAAGQEESEVTIAMARNAHAKLSEDILHV----SQFAKELRAIFHSIKANQSVNLALNGWVAYSYVMKERRTAEATAHAHFRPFHALLIVWPDE 672
            + LSS+L+A +  PK  +CN+ FE+ +DD  FI +P      SS           E+ E S  + + A + +   + ++ +         V  +  +A +L+ ALLH  NR G++++EVR +L IR+   + + R+  +        +  T A +        + ++ V    S  A +L+A++H ++ + SV++ +N WV  S  + +    + T+    RP+H LL++  +E
Sbjct:   40 HRLSSALVAKLFRPKNAMCNQTFELVIDDLRFISHPVATNVQSS-----TSASSSEQRETSMFNVIFALDETKFHIDQDPDFQNGDHKRKVQAYSLVAAQLANALLHEENRVGFVTKEVRELLHIRDELAQNE-RMHHMNNTEDNNSNNTTEAYSNQEIEVDPQTLIDVALGKSVLANDLKAVYHGLEEDGSVHVVINRWVQLSLTLYDSNRFDITS---IRPYHTLLLLVENE 264          
BLAST of mRNA_M-pyrifera_M_contig91691.21239.1 vs. uniprot
Match: A0A6G0WU83_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WU83_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 4.030e-11
Identity = 63/245 (25.71%), Postives = 112/245 (45.71%), Query Frame = 1
Query:   10 YSLSSSLLASILIPKRQLCNEAFEIGVDDTLFIGYPTLVQGVSSDDENEVEGGEEEEGEVSGEDALIAFNVSFVCVGRE-EEI---------------VSEFRELARRLSAALLHTNNR-GYLSREVRTILKIREVWVEEQIRIAQLVRAAGQEESEVTIAMARNAHAK---LSEDILHVSQFAKELRAIFHSIKANQSVNLALNGWVAYSYVMKERRTAEATAHAHFRPFHALLIVWPDEFLSD 684
            + LSS+L+A +  PK  LCN+ F++ +DD  FI +P  +   +S   +       +   VSG      FNV F     + +EI               V  F ++A +L+ ALLH   R G+++ EVR +L +R+   + + ++AQ +                        L +  L  S  A +L+A++H ++ + SV++ +N WV  S  + +       A    RP+H LL++  ++ + D
Sbjct:   42 HRLSSALIAKLFRPKNVLCNQTFQLVIDDLRFISHPVTINLPTS---SNPPSSNSQSSTVSGRRDTSMFNVIFALDDTKLDEILPSASSQEGHLRAKKVDAFAQVASQLAHALLHEETRVGFVTSEVRELLHLRDEIAQNERQLAQSMDGNXXXXXXXXXXXXXEIDVDPQTLIDVALGKSVLANDLKAVYHGLEEDGSVHVVINRWVQLSLTLFDTTMFSLNA---MRPYHTLLLLHENDKILD 280          
BLAST of mRNA_M-pyrifera_M_contig91691.21239.1 vs. uniprot
Match: A0A182GS06_AEDAL (GATOR complex protein NPRL3 n=6 Tax=Stegomyia TaxID=53541 RepID=A0A182GS06_AEDAL)

HSP 1 Score: 68.6 bits (166), Expect = 8.900e-10
Identity = 66/240 (27.50%), Postives = 106/240 (44.17%), Query Frame = 1
Query:   10 YSLSSSLLASILIPKRQLCNEAFEIGVDDTLFIGYPTLVQGVSSDDENEVEGGEEEEGEVSGEDALIAFNVSFVCVGREE-EIVSEFRELARRLSAALLHTNNR-GYLSREVRTILKIREVWVEEQIRIAQLVRAAGQEESEVTIAMARNAHAKLSEDILHVSQFAKELRAIFHSIKANQSVNLALNGWVAYSY-------------VMKERRTAEATAHAHFRPFHA-LLIVWPDEFLS 681
            Y +S  +LA++   K +LCN+ FE+ V+D  F+ +PTLV+ +  DD+                 A    NV F    +    IV  + EL++R+  ALL+   R GYLS E++ ++   +            V AA QE    + A   N    + + IL     A+ ++ I+  +     +N+ LN  V  S+             V+ E  T +   HA  +P+H  LL+V P E L 
Sbjct:   70 YGISDDVLATLFAVKSELCNQKFELKVNDVRFVSHPTLVK-LDGDDQKS--------------SAYFRINVVFALHAQASYSIVKCYYELSKRIGVALLYEEKRAGYLSNEMKMMVASMDE-----------VAAAAQEHDHASSAPCGN----VFDTILRDCTLAQFIKTIYQDLSTTGLLNVTLNQSVTLSFCLPQKAHQFHKKGVVIEPETIDRCLHA-LKPYHGMLLLVDPSELLD 278          
BLAST of mRNA_M-pyrifera_M_contig91691.21239.1 vs. uniprot
Match: A0A397B2Z9_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397B2Z9_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 3.360e-9
Identity = 62/255 (24.31%), Postives = 113/255 (44.31%), Query Frame = 1
Query:   10 YSLSSSLLASILIPKRQLCNEAFEIGVDDTLFIGYPTLVQGVSS--DDENEVEGGEEEEGEVSGEDALIAFNVSFVC--------------------VGREEEIVSEFRELARRLSAALLHTNNR-GYLSREVRTILKIREVWVEEQIRIAQLVRAAGQEESEVTIAMARNAHAKLSED-------ILHVSQFAKELRAIFHSIKANQSVNLALNGWVAYSYVMKERRTAEATAHAHFRPFHALLIVWPDEFLSD 684
            + LSS+L+A +  PK  LCN+ F++ +DD  FI +P  +   +S  +            G  +G      FNV F                          ++ V  F ++A +L+ AL+H   R G+++ EVR +L IR+   + + ++A L  +             ++    +  D        L  S  A +L+AI+H ++ + +V++ LN WV  S  + +  T   T+    RP+H LL++  ++ + D
Sbjct:   42 HRLSSALVAKLFRPKNVLCNQTFQLVIDDLRFISHPVTINVPTSATNPTPSXXXXXXTNGGGTGRRDTSMFNVIFALDDSKLDGILAPSSSRTSSSSSSHRDQKVHAFAQVASQLAHALMHEEARVGFVTTEVRELLHIRDEIAQNERQLA-LHSSDNNSNGGXXXXXXKDTQGDVDVDPQTLIDVALGKSILANDLKAIYHGLEEDGAVHVLLNRWVQLSLTLDDATTVHITS---MRPYHTLLLLHDNDKVLD 292          
BLAST of mRNA_M-pyrifera_M_contig91691.21239.1 vs. uniprot
Match: A0A3R7ATC3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7ATC3_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 3.360e-9
Identity = 62/255 (24.31%), Postives = 113/255 (44.31%), Query Frame = 1
Query:   10 YSLSSSLLASILIPKRQLCNEAFEIGVDDTLFIGYPTLVQGVSS--DDENEVEGGEEEEGEVSGEDALIAFNVSFVC--------------------VGREEEIVSEFRELARRLSAALLHTNNR-GYLSREVRTILKIREVWVEEQIRIAQLVRAAGQEESEVTIAMARNAHAKLSED-------ILHVSQFAKELRAIFHSIKANQSVNLALNGWVAYSYVMKERRTAEATAHAHFRPFHALLIVWPDEFLSD 684
            + LSS+L+A +  PK  LCN+ F++ +DD  FI +P  +   +S  +            G  +G      FNV F                          ++ V  F ++A +L+ AL+H   R G+++ EVR +L IR+   + + ++A L  +             ++    +  D        L  S  A +L+AI+H ++ + +V++ LN WV  S  + +  T   T+    RP+H LL++  ++ + D
Sbjct:   42 HRLSSALVAKLFRPKNVLCNQTFQLVIDDLRFISHPVTINVPTSATNPTPSXXXXXXTNGGGTGRRDTSMFNVIFALDDSKLDGILAPSSSRTSSSSSSHRDQKVHAFAQVASQLAHALMHEEARVGFVTTEVRELLHIRDEIAQNERQLA-LHSSDNNSNGGXXXXXXKDTQGDVDVDPQTLIDVALGKSILANDLKAIYHGLEEDGAVHVLLNRWVQLSLTLDDATTVHITS---MRPYHTLLLLHDNDKVLD 292          
BLAST of mRNA_M-pyrifera_M_contig91691.21239.1 vs. uniprot
Match: W4GXI9_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GXI9_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 3.820e-9
Identity = 62/255 (24.31%), Postives = 113/255 (44.31%), Query Frame = 1
Query:   10 YSLSSSLLASILIPKRQLCNEAFEIGVDDTLFIGYPTLVQGVSS--DDENEVEGGEEEEGEVSGEDALIAFNVSFVC--------------------VGREEEIVSEFRELARRLSAALLHTNNR-GYLSREVRTILKIREVWVEEQIRIAQLVRAAGQEESEVTIAMARNAHAKLSED-------ILHVSQFAKELRAIFHSIKANQSVNLALNGWVAYSYVMKERRTAEATAHAHFRPFHALLIVWPDEFLSD 684
            + LSS+L+A +  PK  LCN+ F++ +DD  FI +P  +   +S  +            G  +G      FNV F                          ++ V  F ++A +L+ AL+H   R G+++ EVR +L IR+   + + ++A L  +             ++    +  D        L  S  A +L+AI+H ++ + +V++ LN WV  S  + +  T   T+    RP+H LL++  ++ + D
Sbjct:   42 HRLSSALVAKLFRPKNVLCNQTFQLVIDDLRFISHPVTINVPTSATNPTPSXXXXXXTNGGGTGRRDTSMFNVIFALDDSKLDGILAPSSSRTSSSSSSHRDQKVHAFAQVASQLAHALMHEEARVGFVTTEVRELLHIRDEIAQNERQLA-LHSSDNNSNGGXXXXXXKDTQGDVDVDPQTLIDVALGKSILANDLKAIYHGLEEDGAVHVLLNRWVQLSLTLDDATTVHITS---MRPYHTLLLLHDNDKVLD 292          
BLAST of mRNA_M-pyrifera_M_contig91691.21239.1 vs. uniprot
Match: A0A7M7NSA9_STRPU (GATOR complex protein NPRL3 n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7NSA9_STRPU)

HSP 1 Score: 64.3 bits (155), Expect = 2.400e-8
Identity = 62/229 (27.07%), Postives = 109/229 (47.60%), Query Frame = 1
Query:   25 SLLASILIPKR-QLCNEAFEIGVDDTLFIGYPTLVQGVSSD---DENEVEGGEEEEGEVSGEDALIAFNVSFVCVGREE-EIVSEFRELARRLSAALLHTNNR-GYLSREVRTILKIREVWVEEQIRIAQLVRAAGQEESEVTIAMARNAHAKLSEDILHVSQFAKELRAIFHSIKANQSVNLALNGWVAYSYVM--KERRTAEATAHAH---------FRPFHALLIV 660
            ++LA+IL P    LC++ FE+ VDD  F+G+P LVQ V++    + +  EG             +  FNV FV     +  +V  +++L++RL+ AL H   R GYLS +   ++ +R    E+++        AGQ E        + +   L   +LH S+  ++LR ++  +  N    + +N W+  S+ +  K    +E     H          RP+HA+L++
Sbjct:   77 NVLANILTPSNTDLCDQRFEVTVDDVKFVGHPLLVQDVNAKWRANSSTREGS-----------TINMFNVVFVLQASADWSLVHCYQDLSKRLALALKHEEKRCGYLSHQA--VIMVR---AEDEV--------AGQPED------CKESPFHL---MLHRSKLTQDLRDVYEGLHTNGIARVYINNWIEVSFCLPHKVHNVSEVITIKHNGIEKSLGAIRPYHAMLLL 272          
BLAST of mRNA_M-pyrifera_M_contig91691.21239.1 vs. uniprot
Match: A0A8K0K6B1_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0K6B1_LADFU)

HSP 1 Score: 64.3 bits (155), Expect = 2.430e-8
Identity = 58/239 (24.27%), Postives = 108/239 (45.19%), Query Frame = 1
Query:   19 SSSLLASILIPKRQLCNEAFEIGVDDTLFIGYPTLVQGVSSDDENEVEGGEEEEGEVSGEDALIAFNVSFVCVGR-EEEIVSEFRELARRLSAALLHTNNR-GYLSREVRTILKIREVWVEEQIRIAQLVRAAGQ-------EESEVTIAMARNAHAKLSEDILHVSQFAKELRAIFHSIKANQSVNLALNGWVAYSYVMKER----------------RTAEATAHAHFRPFHALLIV 660
            S  +L+++   K +LCNE FE+ V+D  F+G+PT +   S     +               ++I  N+ F         IV  +  L+RRL  +L H  +R GYLSRE RT++   +  V  +   +   ++ G        E  + T+ +  +      E IL  S  A++L++++ ++++   V+L +NG +  S+ + +R                   E    A  RP+HA++++
Sbjct:   72 SDEVLSTLFAVKPELCNEKFELKVNDVRFVGHPTHLHSSSCAGNQD-------------NPSIILINIVFALQATASHSIVKCYHVLSRRLGISLRHEESRCGYLSRETRTMVTAHDEAVAARPLDSHSWKSVGPDGERGATEGGQGTLRVGSDLLESPFELILQRSGLARDLKSVYENLRSTGLVHLQINGAIDVSFCLPQRVHRGISDGGGGSPVEPEAVERCLRA-LRPYHAIILL 296          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91691.21239.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A1V9YDJ2_9STRA1.080e-1427.02Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A067CA81_SAPPC5.610e-1327.12Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1W0A6X4_9STRA7.560e-1325.64Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A6G0WU83_9STRA4.030e-1125.71Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A182GS06_AEDAL8.900e-1027.50GATOR complex protein NPRL3 n=6 Tax=Stegomyia TaxI... [more]
A0A397B2Z9_9STRA3.360e-924.31Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A3R7ATC3_9STRA3.360e-924.31Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
W4GXI9_9STRA3.820e-924.31Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A7M7NSA9_STRPU2.400e-827.07GATOR complex protein NPRL3 n=2 Tax=Echinacea TaxI... [more]
A0A8K0K6B1_LADFU2.430e-824.27Uncharacterized protein n=1 Tax=Ladona fulva TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91691contigM-pyrifera_M_contig91691:54..737 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score80.9
Seed ortholog evalue8.6e-13
Seed eggNOG ortholog112098.XP_008613749.1
Preferred nameNPRL3
KEGG koko:K20406
KEGG Pathwayko04150,map04150
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000306,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0001568,GO:0001944,GO:0003006,GO:0003205,GO:0003231,GO:0003279,GO:0003281,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005764,GO:0005765,GO:0005767,GO:0005773,GO:0005774,GO:0005776,GO:0006950,GO:0006995,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007293,GO:0007507,GO:0008150,GO:0008361,GO:0009267,GO:0009605,GO:0009653,GO:0009888,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010506,GO:0010507,GO:0010508,GO:0010646,GO:0010648,GO:0010896,GO:0010898,GO:0014706,GO:0016020,GO:0016043,GO:0016239,GO:0016241,GO:0016242,GO:0019216,GO:0019222,GO:0019898,GO:0019953,GO:0022412,GO:0022414,GO:0023051,GO:0023052,GO:0023057,GO:0030154,GO:0031090,GO:0031312,GO:0031323,GO:0031324,GO:0031325,GO:0031329,GO:0031330,GO:0031331,GO:0031667,GO:0031668,GO:0031669,GO:0031929,GO:0032006,GO:0032007,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032991,GO:0033043,GO:0033554,GO:0034198,GO:0035239,GO:0035295,GO:0035556,GO:0035859,GO:0035904,GO:0035909,GO:0038202,GO:0042594,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043562,GO:0044087,GO:0044088,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044754,GO:0045792,GO:0045834,GO:0048468,GO:0048477,GO:0048513,GO:0048514,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048609,GO:0048646,GO:0048731,GO:0048738,GO:0048844,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0050994,GO:0050996,GO:0051128,GO:0051704,GO:0051716,GO:0060021,GO:0060537,GO:0060840,GO:0061700,GO:0065007,GO:0065008,GO:0071496,GO:0071840,GO:0072358,GO:0072359,GO:0080090,GO:0090066,GO:0090207,GO:0090208,GO:0097042,GO:0098588,GO:0098805,GO:0098852,GO:1902115,GO:1902531,GO:1902532,GO:1903432,GO:1904262,GO:1904766,GO:1990130,GO:1990928,GO:2000785
EggNOG free text desc.TORC1 signaling
EggNOG OGsKOG3830@1,KOG3830@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Exons1
Model size684
Cds size684
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816829.9425902-CDS-M-pyrifera_M_contig91691:53..7371622816829.9425902-CDS-M-pyrifera_M_contig91691:53..737Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91691 54..737 -
1692278203.4800184-CDS-M-pyrifera_M_contig91691:53..7371692278203.4800184-CDS-M-pyrifera_M_contig91691:53..737Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91691 54..737 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91691.21239.1prot_M-pyrifera_M_contig91691.21239.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig91691 54..737 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig91691.21239.1

>prot_M-pyrifera_M_contig91691.21239.1 ID=prot_M-pyrifera_M_contig91691.21239.1|Name=mRNA_M-pyrifera_M_contig91691.21239.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=228bp
LEPYSLSSSLLASILIPKRQLCNEAFEIGVDDTLFIGYPTLVQGVSSDDE
NEVEGGEEEEGEVSGEDALIAFNVSFVCVGREEEIVSEFRELARRLSAAL
LHTNNRGYLSREVRTILKIREVWVEEQIRIAQLVRAAGQEESEVTIAMAR
NAHAKLSEDILHVSQFAKELRAIFHSIKANQSVNLALNGWVAYSYVMKER
RTAEATAHAHFRPFHALLIVWPDEFLSD
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mRNA from alignment at M-pyrifera_M_contig91691:54..737-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig91691.21239.1 ID=mRNA_M-pyrifera_M_contig91691.21239.1|Name=mRNA_M-pyrifera_M_contig91691.21239.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=684bp|location=Sequence derived from alignment at M-pyrifera_M_contig91691:54..737- (Macrocystis pyrifera P11B4 male)
CTGGAGCCCTACAGCCTATCCAGCAGTCTCCTCGCCAGCATACTCATTCC CAAGCGACAGCTCTGCAACGAGGCATTTGAGATTGGAGTGGACGACACAC TGTTCATTGGTTATCCCACACTCGTGCAGGGAGTGAGCTCTGACGACGAG AACGAAGTGGAGGGTGGGGAGGAGGAAGAGGGAGAGGTGAGTGGAGAGGA CGCTCTCATTGCGTTCAATGTGTCGTTTGTATGTGTGGGTAGGGAAGAGG AGATTGTGAGTGAGTTCAGAGAACTCGCCAGGAGACTCAGTGCTGCCCTT CTGCACACTAACAACCGTGGATACCTCTCGAGAGAGGTGAGGACCATTCT GAAGATCAGAGAGGTGTGGGTGGAGGAGCAGATCAGAATCGCTCAACTAG TGAGAGCTGCGGGTCAGGAAGAGAGTGAAGTGACCATTGCCATGGCAAGG AATGCGCATGCCAAGCTCAGTGAAGACATTCTTCACGTCTCTCAGTTTGC CAAGGAACTGAGAGCTATCTTTCACTCCATCAAAGCAAACCAGTCTGTCA ATCTCGCACTCAATGGCTGGGTCGCTTACTCCTATGTCATGAAGGAGAGG AGGACAGCAGAGGCCACTGCACACGCCCACTTCCGCCCCTTCCACGCCCT CCTCATCGTATGGCCCGACGAATTCCTGAGTGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig91691:54..737-

>mRNA_M-pyrifera_M_contig91691.21239.1 ID=mRNA_M-pyrifera_M_contig91691.21239.1|Name=mRNA_M-pyrifera_M_contig91691.21239.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1368bp|location=Sequence derived from alignment at M-pyrifera_M_contig91691:54..737- (Macrocystis pyrifera P11B4 male)
CTGGAGCCCTACAGCCTATCCAGCAGTCTCCTCGCCAGCATACTCATTCC
CAAGCGACAGCTCTGCAACGAGGCATTTGAGATTGGAGTGGACGACACAC
TGTTCATTGGTTATCCCACACTCGTGCAGGGAGTGAGCTCTGACGACGAG
AACGAAGTGGAGGGTGGGGAGGAGGAAGAGGGAGAGGTGAGTGGAGAGGA
CGCTCTCATTGCGTTCAATGTGTCGTTTGTATGTGTGGGTAGGGAAGAGG
AGATTGTGAGTGAGTTCAGAGAACTCGCCAGGAGACTCAGTGCTGCCCTT
CTGCACACTAACAACCGTGGATACCTCTCGAGAGAGGTGAGGACCATTCT
GAAGATCAGAGAGGTGTGGGTGGAGGAGCAGATCAGAATCGCTCAACTAG
TGAGAGCTGCGGGTCAGGAAGAGAGTGAAGTGACCATTGCCATGGCAAGG
AATGCGCATGCCAAGCTCAGTGAAGACATTCTTCACGTCTCTCAGTTTGC
CAAGGAACTGAGAGCTATCTTTCACTCCATCAAAGCAAACCAGTCTGTCA
ATCTCGCACTCAATGGCTGGGTCGCTTACTCCTATGTCATGAAGGAGAGG
AGGACAGCAGAGGCCACTGCACACGCCCACTTCCGCCCCTTCCACGCCCT
CCTCATCGTATGGCCCGACGAATTCCTGAGTGACCTGGAGCCCTACAGCC
TATCCAGCAGTCTCCTCGCCAGCATACTCATTCCCAAGCGACAGCTCTGC
AACGAGGCATTTGAGATTGGAGTGGACGACACACTGTTCATTGGTTATCC
CACACTCGTGCAGGGAGTGAGCTCTGACGACGAGAACGAAGTGGAGGGTG
GGGAGGAGGAAGAGGGAGAGGTGAGTGGAGAGGACGCTCTCATTGCGTTC
AATGTGTCGTTTGTATGTGTGGGTAGGGAAGAGGAGATTGTGAGTGAGTT
CAGAGAACTCGCCAGGAGACTCAGTGCTGCCCTTCTGCACACTAACAACC
GTGGATACCTCTCGAGAGAGGTGAGGACCATTCTGAAGATCAGAGAGGTG
TGGGTGGAGGAGCAGATCAGAATCGCTCAACTAGTGAGAGCTGCGGGTCA
GGAAGAGAGTGAAGTGACCATTGCCATGGCAAGGAATGCGCATGCCAAGC
TCAGTGAAGACATTCTTCACGTCTCTCAGTTTGCCAAGGAACTGAGAGCT
ATCTTTCACTCCATCAAAGCAAACCAGTCTGTCAATCTCGCACTCAATGG
CTGGGTCGCTTACTCCTATGTCATGAAGGAGAGGAGGACAGCAGAGGCCA
CTGCACACGCCCACTTCCGCCCCTTCCACGCCCTCCTCATCGTATGGCCC
GACGAATTCCTGAGTGAC
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