mRNA_M-pyrifera_M_contig91677.21236.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig91677.21236.1
Unique NamemRNA_M-pyrifera_M_contig91677.21236.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig91677.21236.1 vs. uniprot
Match: A0A6H5JK74_9PHAE (CBF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK74_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 1.010e-28
Identity = 55/66 (83.33%), Postives = 60/66 (90.91%), Query Frame = 1 
Query:    1 LWEASLLRSHVHPSVSRFAESLVSTRQNNAVQYKGDPLADFALMPFLNRMAYKNPKAREEKGRSGG 198
            LWEASLLRSHVHPSVSRFA SLVS +QN+AVQYKGDPLAD ALMPFLNRMAYKNPKAR++K +  G
Sbjct:   65 LWEASLLRSHVHPSVSRFAGSLVSKQQNHAVQYKGDPLADLALMPFLNRMAYKNPKARDDKNQGRG 130
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BLAST of mRNA_M-pyrifera_M_contig91677.21236.1 vs. uniprot
Match: D8LPZ6_ECTSI (CBF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ6_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 1.410e-28
Identity = 55/66 (83.33%), Postives = 61/66 (92.42%), Query Frame = 1 
Query:    1 LWEASLLRSHVHPSVSRFAESLVSTRQNNAVQYKGDPLADFALMPFLNRMAYKNPKAREEKGRSGG 198
            LWEASLLRSHVHPSVSRFA+SLVS +QN+AVQYKGDPLAD ALMPFLNRMAYKNPKAR++K +  G
Sbjct:  833 LWEASLLRSHVHPSVSRFADSLVSKQQNHAVQYKGDPLADLALMPFLNRMAYKNPKARDDKNQGRG 898
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BLAST of mRNA_M-pyrifera_M_contig91677.21236.1 vs. uniprot
Match: A0A4D9CW61_9STRA (CBF domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CW61_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.070e-13
Identity = 33/58 (56.90%), Postives = 39/58 (67.24%), Query Frame = 1 
Query:    1 LWEASLLRSHVHPSVSRFAESLVSTRQNNAVQYKGDPLADFALMPFLNRMAYKNPKAR 174
            LWE  LL  H HPSV RFA S++  R  + V Y GDPL DF+ M FL+R A+KNPK R
Sbjct:  623 LWEVGLLALHFHPSVQRFAASVLDPRARHRVTYSGDPLQDFSTMAFLDRFAFKNPKLR 680
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BLAST of mRNA_M-pyrifera_M_contig91677.21236.1 vs. uniprot
Match: A0A835ZC94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC94_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 5.110e-13
Identity = 33/56 (58.93%), Postives = 42/56 (75.00%), Query Frame = 1 
Query:    1 LWEASLLRSHVHPSVSRFAESLVSTRQNNAVQYKGDPLADFALMPFLNRMAYKNPK 168
            LWEA+ LR H HPSV+ FA  L+ T   + ++YKGDPL DF LMPFL+R+AY+N K
Sbjct:  869 LWEATQLRWHYHPSVAHFALELL-TPPGHGIRYKGDPLVDFGLMPFLDRLAYRNAK 923
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BLAST of mRNA_M-pyrifera_M_contig91677.21236.1 vs. uniprot
Match: A0A2G8JG28_STIJA (Putative CCAAT/enhancer-binding protein zeta n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JG28_STIJA)

HSP 1 Score: 67.4 bits (163), Expect = 1.410e-11
Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = 1 
Query:    4 WEASLLRSHVHPSVSRFAESLVSTRQNNAVQYKGDPLADFALMPFLNRMAYKNPKAREE 180
            WE   L  H HPSVS+FAE +++ +    + Y G+PL DF +M FLNR  YKNPK+R E
Sbjct:   27 WELMKLAGHFHPSVSQFAEKILTGK---TIMYDGNPLDDFTIMKFLNRFVYKNPKSRSE 82
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BLAST of mRNA_M-pyrifera_M_contig91677.21236.1 vs. uniprot
Match: A0A2G8LPV8_STIJA (CBF domain-containing protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8LPV8_STIJA)

HSP 1 Score: 67.4 bits (163), Expect = 1.570e-11
Identity = 30/59 (50.85%), Postives = 38/59 (64.41%), Query Frame = 1 
Query:    4 WEASLLRSHVHPSVSRFAESLVSTRQNNAVQYKGDPLADFALMPFLNRMAYKNPKAREE 180
            WE   L  H HPSVS+FAE +++      + Y G+PL DF +M FLNR  YKNPK+R E
Sbjct:  627 WELMKLAGHFHPSVSQFAEKILT---GETIMYDGNPLDDFTIMKFLNRFVYKNPKSRSE 682
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BLAST of mRNA_M-pyrifera_M_contig91677.21236.1 vs. uniprot
Match: A0A7S1CM83_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CM83_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 2.830e-11
Identity = 31/58 (53.45%), Postives = 39/58 (67.24%), Query Frame = 1 
Query:    4 WEASLLRSHVHPSVSRFAESLVSTRQNNAVQYKGDPLADFALMPFLNRMAYKNPKARE 177
            WE   L  H HPSV +FAES++    +  V Y GDPL DF+LM FL+R  YKNPKA++
Sbjct:  331 WELIALAQHYHPSVRKFAESVLEAPVSG-VGYSGDPLKDFSLMSFLDRFVYKNPKAKD 387
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BLAST of mRNA_M-pyrifera_M_contig91677.21236.1 vs. uniprot
Match: A0A7R9Y8A0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8A0_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 2.920e-11
Identity = 30/59 (50.85%), Postives = 43/59 (72.88%), Query Frame = 1 
Query:    1 LWEASLLRSHVHPSVSRFAESLVSTRQNNAVQYKGDPLADFALMPFLNRMAYKNPKARE 177
            L+E  +L  HVHPSV+ F+E ++    ++ + Y+GDPL DFAL PFLNR A++NPK R+
Sbjct:  381 LFELGMLYKHVHPSVTAFSEGIL-LHVDHRLSYEGDPLKDFALGPFLNRFAFRNPKKRD 438
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BLAST of mRNA_M-pyrifera_M_contig91677.21236.1 vs. uniprot
Match: A0A7S4K5P2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4K5P2_9EUKA)

HSP 1 Score: 63.9 bits (154), Expect = 4.030e-11
Identity = 30/57 (52.63%), Postives = 43/57 (75.44%), Query Frame = 1 
Query:    4 WEASLLRSHVHPSVSRFAESLVSTRQNNAVQYKGDPLADFALMPFLNRMAYKNPKAR 174
            WE SLL SH HPSV ++AE L+ST   N ++YKGDP+ D +L+ FL+R +++NPK +
Sbjct:   16 WELSLLVSHYHPSVRKWAE-LLST--GNPIEYKGDPILDMSLIAFLDRYSFRNPKRK 69
[Close]
BLAST of mRNA_M-pyrifera_M_contig91677.21236.1 vs. uniprot
Match: A0A443S664_9ACAR (CCAAT/enhancer-binding protein zeta-like protein (Fragment) n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443S664_9ACAR)

HSP 1 Score: 65.9 bits (159), Expect = 5.400e-11
Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 1 
Query:    1 LWEASLLRSHVHPSVSRFAESLVSTRQNNAVQYKGDPLADFALMPFLNRMAYKNPK 168
            LWE   L  H HP+V+ FA+S++   +NNA++Y GDPLADF +  FL+R  Y+NPK
Sbjct:  273 LWETVNLSRHYHPTVALFADSVL---RNNAIEYDGDPLADFTIKNFLDRFVYRNPK 325
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91677.21236.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JK74_9PHAE1.010e-2883.33CBF domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LPZ6_ECTSI1.410e-2883.33CBF domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A4D9CW61_9STRA1.070e-1356.90CBF domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A835ZC94_9STRA5.110e-1358.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2G8JG28_STIJA1.410e-1150.85Putative CCAAT/enhancer-binding protein zeta n=1 T... [more]
A0A2G8LPV8_STIJA1.570e-1150.85CBF domain-containing protein n=1 Tax=Stichopus ja... [more]
A0A7S1CM83_9STRA2.830e-1153.45Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7R9Y8A0_9STRA2.920e-1150.85Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S4K5P2_9EUKA4.030e-1152.63Hypothetical protein (Fragment) n=1 Tax=Paramoeba ... [more]
A0A443S664_9ACAR5.400e-1151.79CCAAT/enhancer-binding protein zeta-like protein (... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91677contigM-pyrifera_M_contig91677:137..334 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score115.9
Seed ortholog evalue7e-24
Seed eggNOG ortholog2880.D8LPZ6
Preferred nameCEBPZ
KEGG koko:K14572,ko:K14832
KEGG Pathwayko03008,map03008
Hectar predicted targeting categoryother localisation
GOsGO:0000027,GO:0000976,GO:0000977,GO:0000978,GO:0000981,GO:0000982,GO:0000987,GO:0001012,GO:0001067,GO:0001077,GO:0001228,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0003723,GO:0003729,GO:0003824,GO:0005488,GO:0005509,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005911,GO:0006139,GO:0006351,GO:0006355,GO:0006357,GO:0006364,GO:0006366,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009506,GO:0009507,GO:0009526,GO:0009536,GO:0009553,GO:0009889,GO:0009891,GO:0009893,GO:0009941,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022607,GO:0022613,GO:0022618,GO:0030054,GO:0030684,GO:0030686,GO:0030687,GO:0030689,GO:0030690,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0032774,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0040008,GO:0042254,GO:0042255,GO:0042273,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043565,GO:0043933,GO:0044085,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046872,GO:0048229,GO:0048518,GO:0048522,GO:0048638,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0055044,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:1990904,GO:2000112,GO:2001141
EggNOG free text desc.ATPase activity
EggNOG OGsCOG5271@1,COG5593@1,KOG1808@2759,KOG2038@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009
Exons1
Model size198
Cds size198
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816829.802837-CDS-M-pyrifera_M_contig91677:136..3341622816829.802837-CDS-M-pyrifera_M_contig91677:136..334Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91677 137..334 +
1692278203.391527-CDS-M-pyrifera_M_contig91677:136..3341692278203.391527-CDS-M-pyrifera_M_contig91677:136..334Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91677 137..334 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91677.21236.1prot_M-pyrifera_M_contig91677.21236.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig91677 137..334 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig91677.21236.1

>prot_M-pyrifera_M_contig91677.21236.1 ID=prot_M-pyrifera_M_contig91677.21236.1|Name=mRNA_M-pyrifera_M_contig91677.21236.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=66bp
LWEASLLRSHVHPSVSRFAESLVSTRQNNAVQYKGDPLADFALMPFLNRM
AYKNPKAREEKGRSGG
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mRNA from alignment at M-pyrifera_M_contig91677:137..334+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig91677.21236.1 ID=mRNA_M-pyrifera_M_contig91677.21236.1|Name=mRNA_M-pyrifera_M_contig91677.21236.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=198bp|location=Sequence derived from alignment at M-pyrifera_M_contig91677:137..334+ (Macrocystis pyrifera P11B4 male)
CTTTGGGAGGCGTCTTTGTTGCGGTCTCACGTGCACCCGTCTGTGTCGCG
GTTTGCGGAGAGTCTGGTGTCCACCCGGCAGAACAACGCCGTGCAATACA
AGGGAGACCCTCTGGCGGACTTCGCGCTCATGCCTTTCTTGAACAGGATG
GCCTACAAGAACCCCAAGGCCAGGGAGGAGAAGGGCCGGTCGGGGGGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig91677:137..334+

>mRNA_M-pyrifera_M_contig91677.21236.1 ID=mRNA_M-pyrifera_M_contig91677.21236.1|Name=mRNA_M-pyrifera_M_contig91677.21236.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=396bp|location=Sequence derived from alignment at M-pyrifera_M_contig91677:137..334+ (Macrocystis pyrifera P11B4 male)
CTTTGGGAGGCGTCTTTGTTGCGGTCTCACGTGCACCCGTCTGTGTCGCG
GTTTGCGGAGAGTCTGGTGTCCACCCGGCAGAACAACGCCGTGCAATACA
AGGGAGACCCTCTGGCGGACTTCGCGCTCATGCCTTTCTTGAACAGGATG
GCCTACAAGAACCCCAAGGCCAGGGAGGAGAAGGGCCGGTCGGGGGGACT
TTGGGAGGCGTCTTTGTTGCGGTCTCACGTGCACCCGTCTGTGTCGCGGT
TTGCGGAGAGTCTGGTGTCCACCCGGCAGAACAACGCCGTGCAATACAAG
GGAGACCCTCTGGCGGACTTCGCGCTCATGCCTTTCTTGAACAGGATGGC
CTACAAGAACCCCAAGGCCAGGGAGGAGAAGGGCCGGTCGGGGGGA
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