mRNA_M-pyrifera_M_contig9163.21232.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig9163.21232.1 vs. uniprot
Match: D7FXJ9_ECTSI (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXJ9_ECTSI) HSP 1 Score: 245 bits (625), Expect = 1.040e-74 Identity = 116/194 (59.79%), Postives = 152/194 (78.35%), Query Frame = 1 Query: 1 DFKGTTRTEDGVECSLGRLVFNIFEPVEMPILITSIENNLGPRPEDASSAYESPYEIATHFVARDGCGLRGITTLKGVVAEDPSDSKRLVIKFSMGTIEPEDGQDLDSWSEVIGVKDATAEGSKGPLSWVKRKAKGLVLKLLLGFREPADELGSRGELSYEMRRSPSATVDVIYIDDDMRIVRGSRGALVVTTR 582 DFKGTTRT+DGVEC+LGRLVFNIFEPV +P+LI +I+N +G RPE+A AYES Y I+T +VARDG GLRG + G EDPS +R++++F+ G+IEP++GQDLD+W +VIGV+D KGPLS +K KA L+LK++ GF+ PAD LG RGELSYEM+RSP +D+IY+D++MR+ RG +GALVV R Sbjct: 109 DFKGTTRTKDGVECTLGRLVFNIFEPVNLPVLIVAIKNTIGDRPENADPAYESNYVISTRWVARDGSGLRGRVEISGTCWEDPSMPERVLVRFTKGSIEPDEGQDLDAWRKVIGVRDVEGTKDKGPLSTLKEKAARLMLKVVFGFQGPADGLGPRGELSYEMKRSPKGYLDIIYLDEEMRVTRGQQGALVVVDR 302
BLAST of mRNA_M-pyrifera_M_contig9163.21232.1 vs. uniprot
Match: A0A6H5JYC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYC1_9PHAE) HSP 1 Score: 143 bits (361), Expect = 1.270e-37 Identity = 79/174 (45.40%), Postives = 105/174 (60.34%), Query Frame = 1 Query: 106 IENNLGPRPEDASSAYESPYEIATHFVARDGCGLRGITTLKGVVAEDPSDSKRLVIKFSMGTIEPEDGQDLDSWSEVIGVKDATAEGSKGPLSWVKRKAKGLVLKLLLGFREPADELGSRGELSYEMRRSPSATVDVIYIDDDMRIVRGSRGALVVTTRQ*WIDPHQIKSGVCC 627 ++N G RPE A AYESPY+I+TH+VARDG GLRG + E +GQDLD+W VIGV+D KG LS +K KA L+LK++ GFR PAD LG RGELS EM+RSPS +V+Y+D+++ + RG +G LVV TR + +++ SG C Sbjct: 1 MKNTCGDRPEPADPAYESPYDISTHWVARDGNGLRGRVEIA----------------------ETYEGQDLDAWRNVIGVRDTEGTKEKGRLSMLKEKAAKLMLKVVFGFRGPADNLGRRGELSCEMKRSPSGHFEVLYLDEEIWVTRGHKGTLVVVTRVLFF--YRLSSGDFC 150
BLAST of mRNA_M-pyrifera_M_contig9163.21232.1 vs. uniprot
Match: A0A835ZKX0_9STRA (PAP_fibrillin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKX0_9STRA) HSP 1 Score: 129 bits (325), Expect = 1.290e-30 Identity = 74/189 (39.15%), Postives = 102/189 (53.97%), Query Frame = 1 Query: 31 GVECSLGRLVFNIFEPVEMPILITSIENNLG--PRPEDASSAYESPYEIATHFVARD---GCGLRGITTLKGVVAEDPSDSKRLVIKFSMGTIEPEDGQDLDSWSEVIGVKDATAEGSKGPLSWVKRKAKGLVLKLLLGFREPADELGSRGELSYEMRRSPSATVDVIYIDDDMRIVRGSRGALVVTTR 582 G EC+LGRL FN+FEP ++P+ IT I N L P E Y++ FVAR G LRG + GV D D+ RL + F G + P GQDL W V + EG + P + +K L+LKL +GF+ PAD +G Y M R P +D++Y+DD +R+ RG+RG++VV R Sbjct: 124 GWECTLGRLAFNLFEPTKLPVSITHIVNTLEDVPAERQGDRPGELTYDLVNSFVARSPESGVELRGEVAVSGVCWPDSKDANRLRVAFGAGELRPAQGQDLAEWEAVFKPR----EGKEKPRVPLGKKLTNLMLKLFMGFQPPAD--AGQGVQRYTMNRPPEGYLDILYLDDALRVTRGNRGSIVVVER 306
BLAST of mRNA_M-pyrifera_M_contig9163.21232.1 vs. uniprot
Match: UPI00146A6814 (fimbrial protein n=1 Tax=Nodosilinea sp. P-1105 TaxID=2546229 RepID=UPI00146A6814) HSP 1 Score: 101 bits (251), Expect = 9.600e-21 Identity = 62/196 (31.63%), Postives = 100/196 (51.02%), Query Frame = 1 Query: 4 FKGTTRTEDGV-ECSLGRLVFNIFEPVEMPILITSIENNLGPRPEDASSAYESPYEIATHFVARD-GCGLRGITTLKGVVAEDPSDSKRLVIKFSMGTIEPEDGQDLDSWSEVIGVKDATAEGSKGPLSWVKRKAKGLVLKLLLGFREPADELGSRGELSYEMRRSPSATVDVIYIDDDMRIVRGSRGALVVTTRQ 585 F G DG +LGRL FN+F+P + ++I + + P + A ++ I F D L+G G+ P+ + +L ++F+ G +EP D D W +V G DA+ P +K + +GLVLKL+ G P G + ++MRRSP ++++Y+DDD+RI RG +G ++V RQ Sbjct: 72 FPGGELLADGCYSYTLGRLAFNMFQPQTLKLVIDQVSQPVWPIADGAHHTHD----IVVDFTTLDLEVPLQGRVRNLGIC--QPATANQLQVQFTGGVLEPAVDSDRDHWHQVFGDPDAS------PRPGLKARLQGLVLKLMFGLVPPKAMAADTGRIEFQMRRSPKGRLEILYLDDDLRITRGEKGTILVCDRQ 255
BLAST of mRNA_M-pyrifera_M_contig9163.21232.1 vs. uniprot
Match: UPI0019F0B3D6 (Fimbrial protein n=1 Tax=Pleurocapsales cyanobacterium LEGE 06147 TaxID=1828827 RepID=UPI0019F0B3D6) HSP 1 Score: 92.4 bits (228), Expect = 1.180e-17 Identity = 60/196 (30.61%), Postives = 101/196 (51.53%), Query Frame = 1 Query: 1 DFKGTTRTEDG-VECSLGRLVFNIFEPVEMPILITSIENNLGPRPEDASSAYESPYEIATHFVARDGCGLRGITTLKGVVAEDPSDSKRLVIKFSMGTIEPEDGQDLDSWSEVIGVKDATAEGSKGPLSWVKRKAKGLVLKLLLGFREPADELGSRGELSYEMRRSPSATVDVIYIDDDMRIVRGSRGALVVTTRQ 585 DF + +DG +LGRL FN+F+PV + I+I + + P E+ ++ E T V L+GI GV P + L +KF+ G + P+D ++ W V G +D ++ +SW ++ GL +LL G P GE+S+ M+RSP + ++Y+D+++RI RG +G +++ RQ Sbjct: 65 DFPQGEKRQDGKFVYTLGRLAFNMFQPVNLKIVIDRVLQPVLPLEEEEKLTHDIVVEFTT--VDEHLPQLKGIVRNLGVC--QPISDRVLQVKFTGGILVPQDLNQIEEWKTVFGKQDRPSK-----VSWQEKLKFGL-FRLLFGLVPPQSMNPKTGEVSFTMQRSPKGKLAILYLDEELRITRGEKGTVLICERQ 250
BLAST of mRNA_M-pyrifera_M_contig9163.21232.1 vs. uniprot
Match: UPI0014073A4C (fimbrial protein n=1 Tax=Aphanocapsa montana TaxID=327565 RepID=UPI0014073A4C) HSP 1 Score: 91.7 bits (226), Expect = 2.080e-17 Identity = 58/194 (29.90%), Postives = 98/194 (50.52%), Query Frame = 1 Query: 4 FKGTTRTEDGVEC-SLGRLVFNIFEPVEMPILITSIENNLGPRPEDASSAYESPYEIATHFVARDGCGLRGITTLKGVVAEDPSDSKRLVIKFSMGTIEPEDGQDLDSWSEVIGVKDATAEGSKGPLSWVKRKAKGLVLKLLLGFREPADELGSRGELSYEMRRSPSATVDVIYIDDDMRIVRGSRGALVVTTR 582 F R EDG LGRL FN+F+P ++ + I + + P + + +++ T A G L+G GV +P D + ++F+ G +EP D W +V G + T S W K + +GL L+L+ GF P G+ ++M+RSP T++++Y+D+++RI RG +G ++V R Sbjct: 63 FPDGERQEDGTYVYRLGRLAFNLFQPQDLRVQIDEVWQPVFPLGDRSRHSHDIVVTFTTLGTA--GPPLQGQVRNLGVC--EPQDETHIQVQFTGGVLEPIAQTDRQQWQQVFGDRTDTPRSS-----W-KERGQGLFLRLMFGFVPPGAMDPQTGKREFQMKRSPKGTLEILYLDEELRITRGEKGTVLVCER 246
BLAST of mRNA_M-pyrifera_M_contig9163.21232.1 vs. uniprot
Match: UPI001785C01E (fimbrial protein n=1 Tax=Microcoleus sp. FACHB-SPT15 TaxID=2692830 RepID=UPI001785C01E) HSP 1 Score: 91.7 bits (226), Expect = 2.290e-17 Identity = 55/191 (28.80%), Postives = 100/191 (52.36%), Query Frame = 1 Query: 10 GTTRTEDGVECSLGRLVFNIFEPVEMPILITSIENNLGPRPEDASSAYESPYEIATHFVARDGCGLRGITTLKGVVAEDPSDSKRLVIKFSMGTIEPEDGQDLDSWSEVIGVKDATAEGSKGPLSWVKRKAKGLVLKLLLGFREPADELGSRGELSYEMRRSPSATVDVIYIDDDMRIVRGSRGALVVTTR 582 G R++ +LGRL FN+F+P + I+I + + P E ++ E T V + L+GI +G+ + P D L ++F+ G + P+ ++++W V G E SK + +K + VL+++ G P + G +S++MRRSP ++++Y+D+++RI RG RG ++V R Sbjct: 69 GELRSDGKYVYTLGRLAFNLFQPTSLKIVIDRVLQPVVPVGEGQQRTHDIIVEFTT--VDENTPTLQGIVHNQGICS--PHDDNTLQVQFTGGELAPKAPNEIEAWKAVFG------EQSKPSTTGLKERLMTSVLRMMFGIVPPQGMDRNTGRVSFKMRRSPKGNLELLYLDEELRITRGERGTVLVCER 249
BLAST of mRNA_M-pyrifera_M_contig9163.21232.1 vs. uniprot
Match: A0A6B3N4N3_9CYAN (Fimbrial protein n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A6B3N4N3_9CYAN) HSP 1 Score: 91.3 bits (225), Expect = 3.070e-17 Identity = 58/197 (29.44%), Postives = 101/197 (51.27%), Query Frame = 1 Query: 1 DFKGTTRTEDG-VECSLGRLVFNIFEPVEMPILITSIENNLGPRPEDASSAYESPYEIATHFVARDGC--GLRGITTLKGVVAEDPSDSKRLVIKFSMGTIEPEDGQDLDSWSEVIGVKDATAEGSKGPLSWVKRKAKGLVLKLLLGFREPADELGSRGELSYEMRRSPSATVDVIYIDDDMRIVRGSRGALVVTTR 582 +F G + DG +LGRL FN+F+P ++ ++I + + + + ++I F D L GI +GV P +L +KF+ GT+ P++G ++ W EV G + +++ S W +R G +L+ G P GE+S+ M RSP +++++Y+D++MRI RG +G L+V R Sbjct: 66 NFPGGKQLPDGKFTYTLGRLAFNMFQPTQLKLVIDRVLQPV----RLLENKQQRSHDIVVEFTTIDESFPKLTGIVHNQGVC--HPISDTKLQVKFTGGTLAPQEGTNIKDWQEVFGKQRQSSQKS-----WQERFISGF-FRLMFGLVPPQAMNPDTGEVSFTMNRSPKGSLEILYLDEEMRITRGEKGTLLVCQR 250
BLAST of mRNA_M-pyrifera_M_contig9163.21232.1 vs. uniprot
Match: B7KCL7_GLOC7 (PAP_fibrillin domain-containing protein n=1 Tax=Gloeothece citriformis (strain PCC 7424) TaxID=65393 RepID=B7KCL7_GLOC7) HSP 1 Score: 90.5 bits (223), Expect = 5.620e-17 Identity = 53/199 (26.63%), Postives = 105/199 (52.76%), Query Frame = 1 Query: 1 DFKGTTRTEDG-VECSLGRLVFNIFEPVEMPILITSIENNLGPRPEDASSAYESPYEIATHFVARDGCGLRGITTLKGVVAE----DPSDSKRLVIKFSMGTIEPEDGQDLDSWSEVIGVKDATAEGSKGPLSWVKRKAKGLVLKLLLGFREPADELGSRGELSYEMRRSPSATVDVIYIDDDMRIVRGSRGALVVTTR 582 +F G T++G +LGRL FN+F+P ++ ++I + + P ++ + ++I F D LKG+V +PS + L +KF+ ++P++ ++L+SW V + + + +W K + ++ K++ G P + GE+S+ M RSP ++D+IY+D+++RI +G +G ++V R Sbjct: 65 NFPGGELTDEGKYSYTLGRLAFNMFQPAQLKLVIDRVCQPVFP----VNNGQQKSHDIIVEFTTIDD----NFPQLKGIVHNFGICEPSSDRTLQVKFTGSVLKPQESENLESWKPVFKQQKSLKK------TW-KERLTSVMGKIMFGLVPPEEMNPQTGEVSFTMNRSPKGSLDIIYLDEELRITKGEKGTVLVCQR 248
BLAST of mRNA_M-pyrifera_M_contig9163.21232.1 vs. uniprot
Match: A0A6B3MA84_9CYAN (Fimbrial protein n=1 Tax=Symploca sp. SIO2E9 TaxID=2607812 RepID=A0A6B3MA84_9CYAN) HSP 1 Score: 90.5 bits (223), Expect = 5.720e-17 Identity = 58/198 (29.29%), Postives = 99/198 (50.00%), Query Frame = 1 Query: 1 DFKGTTRTEDG-VECSLGRLVFNIFEPVEMPILITSIENNLGPRPEDASSAYESPYEIATHFVARDGC--GLRGITTLKGVVAEDPSDSKRLVIKFSMGTIEPEDGQDLDSWSEVIGVKDATAEGSKGPLSWVKRKAKGLVLKLLLGFREPADELGSRGELSYEMRRSPSATVDVIYIDDDMRIVRGSRGALVVTTRQ 585 +F G + DG +LGRL FN+F+P ++ ++I + + + + ++I F D L GI +GV P L +KF+ GT+ P++G ++ W V G + G SW ++ G KL+ G P GE+S+ M RSP +++++Y+D ++RI RG++G L+V+ RQ Sbjct: 66 NFPGGKQLPDGKFTYTLGRLAFNMFQPTQLKLVIDRVLQPV----RLLENKQQRSHDIVVEFTTIDESFPKLSGIVKNQGVC--HPISDTLLQVKFTGGTLAPQEGMNIKDWQAVFGK-----QHQPGKKSWQEKLMSGF-FKLIFGLVPPKAMNPDTGEVSFTMNRSPRGSLEILYLDQELRITRGNKGTLLVSERQ 251 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9163.21232.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9163.21232.1 >prot_M-pyrifera_M_contig9163.21232.1 ID=prot_M-pyrifera_M_contig9163.21232.1|Name=mRNA_M-pyrifera_M_contig9163.21232.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp MPILITSIENNLGPRPEDASSAYESPYEIATHFVARDGCGLRGITTLKGVback to top mRNA from alignment at M-pyrifera_M_contig9163:5263..6590+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig9163.21232.1 ID=mRNA_M-pyrifera_M_contig9163.21232.1|Name=mRNA_M-pyrifera_M_contig9163.21232.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1328bp|location=Sequence derived from alignment at M-pyrifera_M_contig9163:5263..6590+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig9163:5263..6590+ >mRNA_M-pyrifera_M_contig9163.21232.1 ID=mRNA_M-pyrifera_M_contig9163.21232.1|Name=mRNA_M-pyrifera_M_contig9163.21232.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1008bp|location=Sequence derived from alignment at M-pyrifera_M_contig9163:5263..6590+ (Macrocystis pyrifera P11B4 male)back to top |