|
Homology
BLAST of mRNA_M-pyrifera_M_contig9157.21217.1 vs. uniprot
Match: D7G127_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G127_ECTSI) HSP 1 Score: 227 bits (579), Expect = 2.390e-70 Identity = 113/172 (65.70%), Postives = 138/172 (80.23%), Query Frame = 1
Query: 1 FSWFMVYRKPDYQRLKRQIETIAKDLEKKKVHPVGLDSSSKKREKNQRSIERLEKDLADAMKDLQALATPSKLAVTVLVMAVMVGINKTFAGIVVAKLPFVPFGLLQKISHRGLEGDDPTDCSVTFLFALCQAGVKGNITKLVGMGQPKGVKEPNPFADLSAQYDEAQAKIE 516
+SW+ VYRKP+YQRLKR IE + KD+EKKK PVG S +++ KN +++ RLEKDLA+A KDLQAL +KL V V +M VM+ INK+FAGIVVAKLPFVP L+QKISHR LEG+DPTDCSV F+FALCQAGVKGNI KLVG+G PKG+KE NPFA+L A +E AK++
Sbjct: 23 YSWYTVYRKPEYQRLKRHIENLVKDVEKKKAEPVG--GSVERKVKNLKALSRLEKDLAEATKDLQALTMSNKLVVAVTLMVVMIAINKSFAGIVVAKLPFVPISLVQKISHRALEGEDPTDCSVAFIFALCQAGVKGNIVKLVGVGHPKGMKEANPFAELGAPVEEDHAKVQ 192
BLAST of mRNA_M-pyrifera_M_contig9157.21217.1 vs. uniprot
Match: A0A2J6LTV4_LACSA (Calcium load-activated calcium channel n=2 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6LTV4_LACSA) HSP 1 Score: 119 bits (297), Expect = 1.880e-28 Identity = 66/157 (42.04%), Postives = 92/157 (58.60%), Query Frame = 1
Query: 4 SWFMVYRKPDYQRLKRQIETIAKDLEKKKVHPVGLDSSSKKREKNQRSIERLEKDLADAMKDLQALATPSKLAVTVLVMAVMVGI-NKTFAGIVVAKLPFVPFGLLQKISHRGLEGDDPTDCSVTFLFALCQAGVKGNITKLVGMGQPKGVKEPNPF 471
SW ++YR+ Y+ LK I+ +K LE K P L S K+ I R+E L D+ +DL +L+ AV LV+AV+ G+ N + G V KLPFVP ++QK+SHRGL GDDPTDCS+ FL+ LC ++ N+ K +G P+G P F
Sbjct: 28 SWLLIYRRTSYKSLKSTIDQASKKLETMKTTPTTLKKSKAKK------ISRVETSLKDSSRDL-SLSKFKSGAVVALVLAVVFGVMNSLYEGKAVGKLPFVPVSIVQKMSHRGLRGDDPTDCSMAFLYFLCSMSIRTNLQKFLGFSPPRGAAGPGLF 177
BLAST of mRNA_M-pyrifera_M_contig9157.21217.1 vs. uniprot
Match: A0A118JTC9_CYNCS (Calcium load-activated calcium channel n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A118JTC9_CYNCS) HSP 1 Score: 118 bits (295), Expect = 3.980e-28 Identity = 60/156 (38.46%), Postives = 89/156 (57.05%), Query Frame = 1
Query: 4 SWFMVYRKPDYQRLKRQIETIAKDLEKKKVHPVGLDSSSKKREKNQRSIERLEKDLADAMKDLQALATPSKLAVTVLVMAVMVGINKTFAGIVVAKLPFVPFGLLQKISHRGLEGDDPTDCSVTFLFALCQAGVKGNITKLVGMGQPKGVKEPNPF 471
SW ++YR+ Y+ LK I+ +K LE K L S K+ I+R+E L ++ +DL S V +++ AV +N + G VAKLPF+P ++QK+SHRGL+GDDPTDCS+ FL+ LC ++ N+ K +G P+G PF
Sbjct: 32 SWLLIYRRTSYKSLKSTIDKASKKLETMKTDSTALRKSKTKK------IDRVETSLKESSRDLSLFKFKSGAVVALILFAVFGFLNSLYEGKAVAKLPFIPLRIVQKMSHRGLQGDDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAAGAGPF 181
BLAST of mRNA_M-pyrifera_M_contig9157.21217.1 vs. uniprot
Match: A0A2P5C5L7_TREOI (Calcium load-activated calcium channel n=1 Tax=Trema orientale TaxID=63057 RepID=A0A2P5C5L7_TREOI) HSP 1 Score: 115 bits (287), Expect = 6.060e-27 Identity = 64/150 (42.67%), Postives = 90/150 (60.00%), Query Frame = 1
Query: 4 SWFMVYRKPDYQRLKRQIETIAKDLEKKKVHPVGLDSSSKKREKNQRSIERLEKDLADAMKDLQALATPSKLAVTVLVMAVMVGI-NKTFAGIVVAKLPFVPFGLLQKISHRGLEGDDPTDCSVTFLFALCQAGVKGNITKLVGMGQPKG 450
SW ++YR Y+ L+ I+ AK LE K ++ K + K I+R+E L ++ +DL S AV LV+ V+ G+ N F G VVAKLPF PFGL+ K+SHRGL+GDDPTDCS+ FL+ LC ++ N+ K +G P+G
Sbjct: 33 SWILIYRTNSYKSLRSSIDKAAKKLENMKTETSAKIAAKKSKTKK---IDRVESSLKESSRDLSLFKFKSG-AVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCSMAFLYFLCSISIRTNLQKFLGFAPPRG 178
BLAST of mRNA_M-pyrifera_M_contig9157.21217.1 vs. uniprot
Match: TMCO1_DICDI (Calcium load-activated calcium channel homolog n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=TMCO1_DICDI) HSP 1 Score: 113 bits (282), Expect = 2.730e-26 Identity = 65/157 (41.40%), Postives = 96/157 (61.15%), Query Frame = 1
Query: 4 SWFMVYRKPDYQRLKRQIETIAKDLEKKKVHPVGLDSSSKKREKNQRSIERLEKDLADAMKDLQALATPSKLAVTVLVMAVMVGINKTFAGIVVAKLPFVPFGLLQKISHRGLEGDDPTDCSVTFLFALCQAGVKGNITKLVGMGQPKGVKEPNPFA 474
SW +VYR +Y+R K I+ + L+K S SKK K+++ IE++E+ L A K+L S AV + ++A+ +N+ F G+VV KLPFVP G LQ ISHR + GDD TDCS+TF++A+C ++ NI ++G PK K+ NP+A
Sbjct: 24 SWLLVYRTENYKRGKANIDRLQIQLDKLVDQESETSSLSKKGNKDKK-IEKIEEQLKIANKELSFSKMKSMFAVAISMIALFSYLNRIFDGVVVCKLPFVPIGFLQGISHRTIAGDDYTDCSMTFIYAICSMFIRNNIQLILGTAPPK-TKQANPWA 178
BLAST of mRNA_M-pyrifera_M_contig9157.21217.1 vs. uniprot
Match: W9SNZ3_9ROSA (Calcium load-activated calcium channel n=7 Tax=fabids TaxID=91835 RepID=W9SNZ3_9ROSA) HSP 1 Score: 113 bits (282), Expect = 3.120e-26 Identity = 63/150 (42.00%), Postives = 90/150 (60.00%), Query Frame = 1
Query: 4 SWFMVYRKPDYQRLKRQIETIAKDLEKKKVHPVGLDSSSKKREKNQRSIERLEKDLADAMKDLQALATPSKLAVTVLVMAVMVGI-NKTFAGIVVAKLPFVPFGLLQKISHRGLEGDDPTDCSVTFLFALCQAGVKGNITKLVGMGQPKG 450
SW ++YR Y+ L+ I+ AK LE K + + K +K I+R+E L ++ +DL S AV LV+ V+ G+ N F G VVAKLPF PFGL+ K+SHRGL+G+DPTDCS+ FL+ LC ++ N+ K +G P+G
Sbjct: 33 SWLLIYRTNSYKSLRSSIDKAAKKLETMKTESAKIAAKKSKTKK----IDRVETSLKESSRDLSLFKFKSG-AVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGNDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRG 177
BLAST of mRNA_M-pyrifera_M_contig9157.21217.1 vs. uniprot
Match: A0A8J4UXE1_9MYCE (Calcium load-activated calcium channel n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4UXE1_9MYCE) HSP 1 Score: 112 bits (281), Expect = 3.420e-26 Identity = 66/159 (41.51%), Postives = 96/159 (60.38%), Query Frame = 1
Query: 1 FSWFMVYRKPDYQRLKRQIETIAKDLEKKKVHPVGLDSSSKKREKNQRSIERLEKDLADAMKDLQALATPSKLAVTVLVMAVMVGINKTFAGIVVAKLPFVPFGLLQKISHRGLEGDDPTDCSVTFLFALCQAGVKGNITKLVGMGQPKGVKEPNPFAD 477
FSW +VYR Y++ K+ IE + +E K+ +S K+ K++R +ER E+ L A KDL S AV V ++A+ +NK F G +VAKLPF P G +Q +SHR +EG+D TDC++TFL+ LC G++ NI ++G PK K NPF +
Sbjct: 22 FSWVLVYRTDSYKKSKQTIERLEAQIE--KLKEAESSASILKKGKDKR-LERAEEALKAANKDLSFSKMKSMFAVAVSMIALFSYLNKGFDGKIVAKLPFEPIGFIQGLSHRNIEGNDMTDCAMTFLYVLCSMGLRNNIQIILGTEPPK-TKNANPFLE 176
BLAST of mRNA_M-pyrifera_M_contig9157.21217.1 vs. uniprot
Match: A0A067FXK5_CITSI (Calcium load-activated calcium channel n=6 Tax=Sapindales TaxID=41937 RepID=A0A067FXK5_CITSI) HSP 1 Score: 112 bits (280), Expect = 6.560e-26 Identity = 63/150 (42.00%), Postives = 90/150 (60.00%), Query Frame = 1
Query: 4 SWFMVYRKPDYQRLKRQIETIAKDLEKKKVHPVGLDSSSKKREKNQRSIERLEKDLADAMKDLQALATPSKLAVTVLVMAVMVGI-NKTFAGIVVAKLPFVPFGLLQKISHRGLEGDDPTDCSVTFLFALCQAGVKGNITKLVGMGQPKG 450
SW ++YR Y+ LK I+ +K LE K+ S+ K + K I+R+E L ++ +DL S AV LV+ V+ G+ N F G VVAKLPF PFG++ K+SHRGL+GDD TDCS+ FL+ LC ++ N+ K +G P+G
Sbjct: 33 SWLLIYRTNSYKTLKSSIDKASKKLETMKIENPAKISTKKSKTKK---IDRVETSLKESSRDLSLFKFKSG-AVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGIVMKMSHRGLQGDDATDCSMAFLYFLCSISIRTNLQKFLGFSPPRG 178
BLAST of mRNA_M-pyrifera_M_contig9157.21217.1 vs. uniprot
Match: A0A0A0LGX0_CUCSA (Calcium load-activated calcium channel n=7 Tax=fabids TaxID=91835 RepID=A0A0A0LGX0_CUCSA) HSP 1 Score: 112 bits (279), Expect = 8.450e-26 Identity = 63/150 (42.00%), Postives = 89/150 (59.33%), Query Frame = 1
Query: 4 SWFMVYRKPDYQRLKRQIETIAKDLEKKKVHPVGLDSSSKKREKNQRSIERLEKDLADAMKDLQALATPSKLAVTVLVMAVMVGI-NKTFAGIVVAKLPFVPFGLLQKISHRGLEGDDPTDCSVTFLFALCQAGVKGNITKLVGMGQPKG 450
SW ++YR Y+ L+ I+ AK LE K + K +K I+R+E L ++ +DL S AV LV+ V+ G+ N F G VVAKLPF PFGL+ K+SHRGL+GDDPTDC++ FL+ LC ++ N+ K +G P+G
Sbjct: 33 SWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKK----IDRIETSLKESSRDLSLFKFKSG-AVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRG 177
BLAST of mRNA_M-pyrifera_M_contig9157.21217.1 vs. uniprot
Match: A0A1S4CK71_TOBAC (Calcium load-activated calcium channel n=4 Tax=Nicotiana TaxID=4085 RepID=A0A1S4CK71_TOBAC) HSP 1 Score: 111 bits (278), Expect = 1.090e-25 Identity = 60/149 (40.27%), Postives = 83/149 (55.70%), Query Frame = 1
Query: 4 SWFMVYRKPDYQRLKRQIETIAKDLEKKKVHPVGLDSSSKKREKNQRSIERLEKDLADAMKDLQALATPSKLAVTVLVMAVMVGINKTFAGIVVAKLPFVPFGLLQKISHRGLEGDDPTDCSVTFLFALCQAGVKGNITKLVGMGQPKG 450
SW ++YR Y LK I+ +K LE K + SKK I+R E L D+ +DL S V +++ V +N F G VVAKLPFVPF ++QK+SHRGL G+D TDCS+ FL+ LC ++ N+ K +G P+G
Sbjct: 32 SWVLIYRTTSYNSLKSNIDKASKKLETMKTLESKKPNKSKK-------IDRFETSLKDSSRDLSLFKFKSGFVVAIVLFMVFAFLNSLFEGKVVAKLPFVPFRIIQKMSHRGLSGNDMTDCSMAFLYLLCSMSIRTNLQKFLGFSPPRG 173
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 216.9 |
Seed ortholog evalue | 7.5e-54 |
Seed eggNOG ortholog | 2880.D7G127 |
Preferred name | TMCO1 |
KEGG ko | ko:K21891 |
KEGG TC | 1.A.106.1 |
Hectar predicted targeting category | other localisation |
GOs | GO:0003674,GO:0005215,GO:0005216,GO:0005261,GO:0005262,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006950,GO:0006983,GO:0006984,GO:0007154,GO:0007165,GO:0008150,GO:0008324,GO:0009607,GO:0009987,GO:0012505,GO:0015075,GO:0015085,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0019725,GO:0022803,GO:0022838,GO:0022857,GO:0022890,GO:0023052,GO:0030001,GO:0030003,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0032469,GO:0033554,GO:0034220,GO:0034976,GO:0042175,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046873,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0070588,GO:0070838,GO:0071216,GO:0072503,GO:0072507,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098827 |
EggNOG free text desc. | endoplasmic reticulum calcium ion homeostasis |
EggNOG OGs | KOG3312@1,KOG3312@2759 |
Ec32 ortholog description | Uncharacterised conserved protein UCP023322, transmembrane eukaryotic |
Ec32 ortholog | Ec-27_001280.1 |
COG Functional cat. | U |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko02000 |
Exons | 5 |
Model size | 1098 |
Cds size | 507 |
Stop | 1 |
Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816828.6252618-UTR-M-pyrifera_M_contig9157:107..686 | 1622816828.6252618-UTR-M-pyrifera_M_contig9157:107..686 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig9157 108..686 - |
1692278202.6490688-UTR-M-pyrifera_M_contig9157:107..686 | 1692278202.6490688-UTR-M-pyrifera_M_contig9157:107..686 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig9157 108..686 - |
1622816828.6982164-UTR-M-pyrifera_M_contig9157:7559..7571 | 1622816828.6982164-UTR-M-pyrifera_M_contig9157:7559..7571 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig9157 7560..7571 - |
1692278202.7284257-UTR-M-pyrifera_M_contig9157:7559..7571 | 1692278202.7284257-UTR-M-pyrifera_M_contig9157:7559..7571 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig9157 7560..7571 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816828.635562-CDS-M-pyrifera_M_contig9157:686..758 | 1622816828.635562-CDS-M-pyrifera_M_contig9157:686..758 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9157 687..758 - |
1692278202.6671505-CDS-M-pyrifera_M_contig9157:686..758 | 1692278202.6671505-CDS-M-pyrifera_M_contig9157:686..758 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9157 687..758 - |
1622816828.6459794-CDS-M-pyrifera_M_contig9157:1142..1217 | 1622816828.6459794-CDS-M-pyrifera_M_contig9157:1142..1217 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9157 1143..1217 - |
1692278202.681639-CDS-M-pyrifera_M_contig9157:1142..1217 | 1692278202.681639-CDS-M-pyrifera_M_contig9157:1142..1217 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9157 1143..1217 - |
1622816828.6561527-CDS-M-pyrifera_M_contig9157:3956..4062 | 1622816828.6561527-CDS-M-pyrifera_M_contig9157:3956..4062 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9157 3957..4062 - |
1692278202.692109-CDS-M-pyrifera_M_contig9157:3956..4062 | 1692278202.692109-CDS-M-pyrifera_M_contig9157:3956..4062 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9157 3957..4062 - |
1622816828.674563-CDS-M-pyrifera_M_contig9157:4867..5057 | 1622816828.674563-CDS-M-pyrifera_M_contig9157:4867..5057 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9157 4868..5057 - |
1692278202.7074707-CDS-M-pyrifera_M_contig9157:4867..5057 | 1692278202.7074707-CDS-M-pyrifera_M_contig9157:4867..5057 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9157 4868..5057 - |
1622816828.686218-CDS-M-pyrifera_M_contig9157:7495..7559 | 1622816828.686218-CDS-M-pyrifera_M_contig9157:7495..7559 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9157 7496..7559 - |
1692278202.7179193-CDS-M-pyrifera_M_contig9157:7495..7559 | 1692278202.7179193-CDS-M-pyrifera_M_contig9157:7495..7559 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig9157 7496..7559 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9157.21217.1 >prot_M-pyrifera_M_contig9157.21217.1 ID=prot_M-pyrifera_M_contig9157.21217.1|Name=mRNA_M-pyrifera_M_contig9157.21217.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=169bp
MVYRKPDYQRLKRQIETIAKDLEKKKVHPVGLDSSSKKREKNQRSIERLE KDLADAMKDLQALATPSKLAVTVLVMAVMVGINKTFAGIVVAKLPFVPFG LLQKISHRGLEGDDPTDCSVTFLFALCQAGVKGNITKLVGMGQPKGVKEP NPFADLSAQYDEAQAKIE* back to topmRNA from alignment at M-pyrifera_M_contig9157:108..7571- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig9157.21217.1 ID=mRNA_M-pyrifera_M_contig9157.21217.1|Name=mRNA_M-pyrifera_M_contig9157.21217.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7464bp|location=Sequence derived from alignment at M-pyrifera_M_contig9157:108..7571- (Macrocystis pyrifera P11B4 male) TTCTCGTGGTTCATGGTCTACCGAAAACCTGACTACCAGCGGCTCAAGCG
GCAAATCGAGACCATTGCCAAAGACCGTGAGTCCTCTCCCTAAGCACTGG
ATACGGAAATACAAGGAGCTTCGCTCCGCGGGCGGCCTGCGCCGCCCGCT
ACGCTCGCTCAGGAAGGAAAAAAAGCACATCAAGTTATGCGAAGCGGACA
GAGGTCCATGACTGAATATAGTTTTTTTAATGATTGTAGTTGCAAACTGG
CAACTTGATATTGCCAAGGGTCACGCCGCCATGCTTCAGGGGAAAGCAGC
TCGGACGCCACATACGCCTCGCGTCGCGGGCGGTTCCGCCCGCTACGCTC
GCTCACATGTCGTACGTACGTACATACCCCAGGTACATACGCTTCGCGTC
GCGTGCAGTTCCGCCCGCTACGCTCGCTCACATGCCGTACGTGCGTACAT
ACCCCAGGTAGGGTAATCCTTTTCTGCTTTTGATATGCTTGCTCTATGTG
TACGAAAACAGAAAGCACAGCACGGCACAGAAGCATCGCAAAAACATTGA
AATGAAACCGAAAATTTTGCAAAGAAGAAAAAATCCCCGTCCCCTCATGT
AATAGTTTTCTGCATGTTTGGAACACCTTGCACCGGTCAAAAAAAAAAAC
ATCGAACAGCAGAGTTTCTCTCTCAGCCTCGTACGCCCCCCGCCCCTCTC
GCGACCATCTCGCCACCGATTCGGTCCGGGTAAAGGCTTTCCTCACTCTC
TGCCACAGTGAGCTCCGTCGCCAGCCTGGCGTGAAGCCCGGTTCTCACCG
CGGCCGGCGTTCGCCAGCTCGACAATGTTGGTGCTCAGACTGCGTAGCTT
TCTCCTTGAGCTTCAGCCCGGTCGCAAAAATAAGCACTGCTTGAATATTA
TCTTGCAATCCCGAACTACCCTTATATATTCGTACATACTCTATCCAAAA
TCACCAATAGAGGCCAGACAGAGCCCATTCATGCTTCCCTCGTGTCTGGA
GGCACACGCAACGCCTAGCCACGAAAACGGCGACCGCGCTCCTTGCAACC
CCCCCCCAACCCGCCAGCACCCGCTGACACTCGCGACGGCGCCGGGCTCG
CCCGCGGTGCCGTGCTCGGAGTACACGCACGCACATGAAACGAAATAAGA
AAAAGGAAAAAAGGACAGAAAGTGCCAAGAGAAATGGAGAAAACAAAGAA
CCGCTGGAAAGGTCCGGCAAGTATTAAAAGGAGGCCATTCCGAAGTGGAA
GCTTTGAGAGGCCAGGGATGTACCAACCGAGCACGCTCAGAGAGTGGGAC
ATCTGTAAGTAGTTCTATGTTGAGGGGGGCGAGGGTCGTTTTTCATTTTT
CCGCGTTCTTCTCCTCAATCCAAAATGGTGTAGGCCTTGCCCGGGATATT
TGCTTGTACATATCACACCTATTAGTAGAGTGATAATATTCGTAAACTGG
CATGACACGTACTGATATATACTATCAACATGTTCCGTTTGAATATCTCT
GCGCTAAACTTCCAACACAGTGATAGCACATCCACATATAGTTCCTGTTC
TGACAAGTAGCAATTGCGCGACGGATGGTGTCCCACAGCATTCTTCTAGA
CGCTAGCTAAAGAGAGCAACGTTCGTTTTTGTATTGGCGTCGACGGCAGG
ACTTCTACCGCAGGCGTAGGGAGCCATGCTGACCATGTATCCCATCGAAC
GGTCGCAATGAGAACCATGTTTGCGCTCTACATACTACCCCTTCGCCAGG
CACTGCGTACTGTACTGCGATGCACCTGGTAGGTATGTAGTCTACTGTGC
GATGATGGGATGAGGACCACAGTATACCGGTAACTCGTGTACCTGGTATG
TAGCTTTGTGAATTGTCCAAGTCCCAGGTATGTACGTAGCAGAGAGGTAA
GCTCTATATCTAAACTATGAAATGCAGCAGAAGTACTGTAGGTGATGACA
TTCCCAGGTGCGGGAAGCAGACGGCAGGGCATGTTTTACAGTTTTTTCAA
GATGTGCCTGCTCGGGCCGACGGATTTCGCTCGTGCGCGGCGTATCATGC
GTATTTTGCTCGTACCGATGTACTAGTCCTAATGTACCATCACTCAAAGC
ACCCATGCCGGCGGTTTAGTGCATTGCTGTATATGTATTTACATTAATAT
TTGAAATTATTATCCACCTTGTTGAAAATAAACACACTCTGCTGTGCATA
CCTTGCGCCTGCCGGCGCGCGTGGCACTCCGCGCGTGCTAACTGCTGACA
AATGCTACTCGTACGCCAATTGCCTGATACCAGCTTTACTAATTTGCGTT
GTTCTTCTCTCCACATCGAGCCACGCTGCTGCTGTACTATTTAGAATACG
TAACAGGCAAATCCGCCTTCAAGGTACGATACAGCAGAGCTCCTGTAAAA
CCGTCTCACACTTTTGCAAGAATTTCCCGCCTGGGAACTCGAGTAGTTTC
TCCCCCAAGTTAAAAGAGTATCCCCTTCCCCTTTCCTGCTTTCCTCCGAC
TAAAACCGAGGCAGTGGAAAAGAAGAAGGTCCATCCGGTGGGGTTGGACA
GCAGCTCGAAGAAGCGAGAGAAGAACCAGCGGTCGATCGAACGCCTGGAA
AAAGACCTGGCGGACGCGATGAAGGACCTCCAGGCGTTGGCAACGCCGAG
CAAGCTCGCGGTGACGGTCCTGGTGATGGCGGTCATGGTCGGTATCAACA
AGACGTGAGGAAAATTAGGGCCGAGAACGGTGGAGGGGTGAAGTTTTGCT
TCTGCTGTCAGATCGTATACCAGTGTCCTTCTATAGTATATCGTTCGTCT
CCATGTGTACGATAGAGCTATTGTATGTATGCGGTTAGCTATAACAAACT
TGTTCGAAAAAGGCTGTTCTCACGCATTTCAGCTCTCCCAGCACCCAGCT
GGGGGACATGCATTCCAATGTCGACAGCGAACAGCTCAATGGTAGAAGCG
ATGGACTACGTAAGGAGTGGCTTATGTGTATGGACAGAAGTCTCTTGTAG
TCGCCGGTCTCTCGGACGCTGTGATCGTCGGGATTGATCCCCCCCCGCCT
CTGGTTCATGCGTGTGTTCAGATATACCTAGTATATAGGTGTTTATGTGC
CTGTGTTCGGTAGCTATTGGTGGGTGGCTGTCGTTTTCTTTCGGTAAGGA
TGCTGCACTCGCTCGGGTTGGAGCAACCTCCGTGCTCTCAACCTAGGCTC
GAGAGGGAGCATCGCCTCGCCCATTGCCCATTTTCCGATCGGAACAAGGA
CTAATCCGAGGTGCTCGACAAGAAGAGAAAACGACCTACACTCCGTCCGA
GTGTCGAAATAAAAACAACGAACCAGTGCGTTGGGATTTCTGGACGAGTT
TTACGAAATGCACTTTTTTCAGATTTTTTATTCTACTTGGTTTTAGTAAA
CCCCCCCTGTCTGGGTCTCGAAAATGGGTAGTGGGGTGACTATTAACAGT
AACAAATAACCACCATTCTGTGTTTTGATGCGACGTGCCGCTTGTGTATG
CATGATCAGCTTCGCGGGTATCGTGGTGGCGAAGCTTCCTTTCGTGCCTT
TTGGTCTCCTTCAAAAGATCAGCCACCGGGGTCTCGAGGGAGACGACCCA
ACGGACTGCTCTGTGGTAAGCGACGTGTACACAGCGGTGTGCAACGAGGC
GTTCTACGATAGAGGTTCATCCTAAATTTTCTGGGGCTCCTCACTTGACC
TTAAGGAACTCCATACCTCACCCGAACAATATTTTCAGCAAAAATCAAAT
TGCATCCCGAAGAATAATCCCATGGCCCAAGTATATAAATACGTCATTTT
TCGAAACAAGATTGGTATTCCGACGGTTTGGGGTTAAGGAGCCCCGGCAT
TCAGAAACAATTTCGAGGGAATGTGCAACCTCCATCGTAGAACGCGTCCA
ACGGTACTCAGCAGGCGCCGCGAAAAAATACCTGGTGCGCGCGCGTTGTT
GATGAGCGAGATGTCTGCTGTTCGAGCGGAATCTTGGTGAGCGTGGTGTC
TCTGGTATGACTGGAAGATGCGGCAAACGAGGACAAACTGGTTGAGTGGT
GTCATCGTGACCACGGGCTATATACCTGGTACCACTCCGACCCAAAATAT
AAGGGCCGTTTGGACTGAATAACTATATGCTAAAGGTCCCTATATTTCGG
GTCAGAGTGGTATAATCTACGGCGATGAACTATGAATTATGAGATAGTCA
ACCAGTCCAAGATCATGTTGTCAGCACAGGCCTCACTCACTGCAGAGCTT
AGCGCGAAGATTGCATCGACGAGCCACTTGGGAAATGGTAAGAGGACACG
CAGTACTTAACAAGCGTCAGGGTTGTGAACCGAAAACATTAAATGGCTCT
GTCGTTTTTTCGGTTTTTCACCGGAAAGTCGGGCGATTGCGCTCTGTTTT
TTTTTCAAGCAGACCGAAACGATAAAAACGAAAGATCGAGTGTTTCGGTC
GGTTTTGGTCGGTTCTAGCCAATAACCCGAGAAAAAATGTCGTTTTTCGG
TCTGAAAAAAACCCCAAAAAAAATCCCAAAAGACGACTTTCGGTTTTCGG
TTCACAACCCTGGGTCAGCATACAGTACGAATAGAGCCCATGCGTGGTAC
ATAGGCAATTGTATAATGTGAGTAGCACTGTATGTTTCCAAGAGTAGTAA
CGCAACTGGCAAGGGACCGGAAAATTCGATATAAAAAATGAGGAGTGGTA
TTTTGCCGCTAGAACTGCTGGTAGGGGTGGGAATGGATTCGTTTTAGAGG
TAAAAGAATGTCTAGTCTATTCGAGAAACTAACTGCTGGTAGGGGTGGGA
ATGGATTCGTTTTAGAGGTAAAATAATGTCCAGTCTATTCGAGAAACCGT
TCAAAACATGGAAACAACTTAATTTTGAAAATAGTCTGCCACCACCCTAC
GTACTTGGTTTTCAGACTACATTTCACGGTTGCGTCAGATATTTGATTGC
TCGACAACAGGAAACGAATTGGATTATAGCGTTCGACAAGCACATCCCAT
CAATAGAGAAAGAGGCTGTGATTGGTTGTGATTTGAGCTGCAGATATTTT
AGTGGAGGTATGCGGGAAATCTCGATTTTTCAGGTTGTATTCGTATTTTT
CTCTGTAGGGAAGAACTATTTGACGGTGCTAAAAAGTCTATACGTGTCAG
TCCCTCCTGCGCACACAGCAATGCAACCCATGATTGAATCCGACTACAGT
ACAGTAGTAGCCGACAAGAAATTTGCTCCAAGGGTTGACCCTCTTTTCAC
GAGTCAATTGTTGATGGGAAATTCGATCAAAAGTATCTCTGGATGAAAAA
AAAGACGTCCAGGCCTCATTGTATCGGACGAAAACGGTGCCAGACATAAA
CGCGGCCGCACGCCGAGCGATTGCCATCACACCTGGTGCCATCGCCGCAG
CGAAGGCCATCTGTGATCTGGCCTTGATGCAGCGGGAAGCGAGTCACCCC
TAGCATTCAGATGCGAACGAATCACTGTTGTCTCACGTGAGAAAACTATC
GAGTAAAAATACTCTACCGCATCACTTTCACTTTCCAGCTTAACTCGCAG
GAGGTTTTACCCTCAGCGGTCTTCTTCTGGACATGCCGTGGTCACAGGTG
TCGTCCCTTGTCCCCCCCCGGTACGTGCCTTCATTTTTTGTCGGGCATAG
GATTCAGCATTTCCGCTGCTCGTCGATTTTCATCGAATGTAGCTAACTCA
AGCTTTCGCACGTTCCGCTATTAATAGTCAATTCTTTTACGCAAGAAAAA
ATCCTTACGAGTATGCACTCGGTGAGACTCGAACCCACGAAGTTGATCTT
AGTAGGCACGCGGACCACCTACTAAGCCACCGGGGACGGGAACGGGAAAT
ATAGGAAAGGCACTGCTTTTATTTTACTTTTGGGAGGCAGCATCATCGAA
CGGATGTTTTGGTGGCAAAGTTTTTTTTTCCCCATCACGGATTGGTTAAT
TTCCTCAAGATTTTTTTCCCCAGATATCGACCATGCGACGTTTACCCTTT
TTTTTTTTCACGCACTAAAACAAATCCATTCCCACCCCTAACTGAAGAAC
ATGTGTATCTGGCAGTAGCTTAGGCGTCTGTACGAGCGCGGGTTGGTTCT
CGTTTGAATGCCACCTGCACCCGGAGAACGTCCCTCGTTACAAGGGTGTG
TGGCGCACAAGTGAGCGGCTTGGGCGGACAGTCTGACACGTACGATCAGA
GACGGCGTGCAAGCCCCAATGTCTCACGTGGACTGATCGCTGCGTTTTTC
CCCCGTGACACATGCACCGTGTTGAAACCTTTTCCTTTCTTTTTTTTTTC
GCGGGCCGTTGTTTTTGTCGTATCTCGGCGCGCTGCTACTACAACGCTGT
GCAGACGTTCCTGTTCGCGCTTTGCCAGGCCGGGGTCAAGGGGAACATCA
CAAAACTTGTTGGGATGGGCCAGCCGAAGGTGAGGACGTGCAGGGGTCGC
GAACAGCAAAAAATGGGTCCGAACGATGCGCTCGTTGACCCCTCGGGCAC
GTTTTCCGGCGACAATTATACTCTGTCGTGCTGGGCTGTTGAACGCGCTC
GTTGTCGCACCCGGCTCCGCTCTCTCTCTACGGTTATGCGATTTATTGAT
GATTGTTTGCCGTTTGCAGTCCAGTATACGTTTTTGTTCGGTGGACGAGG
CCTTGTTGTTTTTGTGTCTCCATCTCAAGCAGCGTCTAACAGATCGTTTC
TGCTTGTCGTGCCGCGACCGTTTTCTGTCTGCCCCTCCCCGCATCCGTCG
CTTTGGCATCCATCGGTACGGCGGGCGAATTTTTCGACCACTTTCTTTCG
TCGCGGACATCAGGGAGTAAAGGAGCCCAACCCGTTCGCAGACCTGAGTG
CACAATACGACGAGGCACAGGCGAAGATAGAATGAATGGGCGGTGTGGGG
CCTGCAGTATATAATATGGTGTCTACTCGCTGCAAGGACTCGACGGCGAC
GGCGGTTCTTGTTTTTTGTTTTGGAGGCTCTTGGTGATGTATGATGGATG
GTTTCTGTTCTGGTGCGTGCGCGGCCTTTGGGGCGGTGGCCAACTGGCAG
ATGGTGCATTGATTAACGCGTTCGTAAGGGTGACATAGCGTATTTTGAAA
CACCAAGAATGTTTCACGGGTCGGGTGGAACCTCGCGGGTAAGGTCGAGT
CGGGTCGGGCAAGGGTGACCCGACTCGATCCGTGAGAGTTTTGAAAACCT
CCTGATTCGACCAGTCCCCACCCGTGAGGTTTCGAATTTTTTGCGACCAG
ACCCGCGGGTAAGGGTAATTCATGACCCGTGAAGAGCTCTGGTATTTTCC
ACGGGTCGATCAATCGACAGGAAGAAATGGTAACGCACACTGCTGCACTG
GACACGCAGTACACGTTTCCCCTGACATGTTGGATGGGCCCAACCTTTCT
GGATGTTTGCCTTAACGTGATCGAGAATAGTTGTGCATGCGCCGGCGGCA
GCCATGTACCCCCC back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig9157:108..7571- >mRNA_M-pyrifera_M_contig9157.21217.1 ID=mRNA_M-pyrifera_M_contig9157.21217.1|Name=mRNA_M-pyrifera_M_contig9157.21217.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1014bp|location=Sequence derived from alignment at M-pyrifera_M_contig9157:108..7571- (Macrocystis pyrifera P11B4 male) ATGGTCTACCGAAAACCTGACTACCAGCGGCTCAAGCGGCAAATCGAGAC CATTGCCAAAGACCATGGTCTACCGAAAACCTGACTACCAGCGGCTCAAG CGGCAAATCGAGACCATTGCCAAAGACCTGGAAAAGAAGAAGGTCCATCC GGTGGGGTTGGACAGCAGCTCGAAGAAGCGAGAGAAGAACCAGCGGTCGA TCGAACGCCTGGAAAAAGACCTGGCGGACGCGATGAAGGACCTCCAGGCG TTGGCAACGCCGAGCAAGCTCGCGGTGACGGTCCTGGTGATGGCGGTCAT GGTCGGTATCAACAAGACTGGAAAAGAAGAAGGTCCATCCGGTGGGGTTG GACAGCAGCTCGAAGAAGCGAGAGAAGAACCAGCGGTCGATCGAACGCCT GGAAAAAGACCTGGCGGACGCGATGAAGGACCTCCAGGCGTTGGCAACGC CGAGCAAGCTCGCGGTGACGGTCCTGGTGATGGCGGTCATGGTCGGTATC AACAAGACCTTCGCGGGTATCGTGGTGGCGAAGCTTCCTTTCGTGCCTTT TGGTCTCCTTCAAAAGATCAGCCACCGGGGTCTCGAGGGAGACGACCCAA CGGACTGCTCTGTGCTTCGCGGGTATCGTGGTGGCGAAGCTTCCTTTCGT GCCTTTTGGTCTCCTTCAAAAGATCAGCCACCGGGGTCTCGAGGGAGACG ACCCAACGGACTGCTCTGTGACGTTCCTGTTCGCGCTTTGCCAGGCCGGG GTCAAGGGGAACATCACAAAACTTGTTGGGATGGGCCAGCCGAAGACGTT CCTGTTCGCGCTTTGCCAGGCCGGGGTCAAGGGGAACATCACAAAACTTG TTGGGATGGGCCAGCCGAAGGGAGTAAAGGAGCCCAACCCGTTCGCAGAC CTGAGTGCACAATACGACGAGGCACAGGCGAAGATAGAATGAGGAGTAAA GGAGCCCAACCCGTTCGCAGACCTGAGTGCACAATACGACGAGGCACAGG CGAAGATAGAATGA back to top
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