mRNA_M-pyrifera_M_contig91459.21196.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig91459.21196.1
Unique NamemRNA_M-pyrifera_M_contig91459.21196.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig91459.21196.1 vs. uniprot
Match: A0A7Y5W558_9BACT (Flagellar basal-body rod protein FlgF n=1 Tax=Pirellulales bacterium TaxID=2715253 RepID=A0A7Y5W558_9BACT)

HSP 1 Score: 306 bits (784), Expect = 2.290e-102
Identity = 147/245 (60.00%), Postives = 188/245 (76.73%), Query Frame = 1
Query:    1 LYLSAEGAEAQSRRMEVISNNLANVNTPGFKRDLAIFEARYAEATIQGLDQPGSGSINDIGGGIYVRETATDFTMGPLKNTATPTDFAVRGEGFFMVDKDGEKLLTRAGDFQITSEGDLVTQQGYPVLDSTENPISISLNKGPWELTENGAINQAGRLQSLALVNTESLDQLQKVGENLFRPLGKTAPIETSERRVVSGFLEQSGVSATLETMQLIEASRAFEANVALIRHQDEMLNGLVNRVLR 735
            LY+SAEGA AQS+R+E ++NNLANV+T GFKRDLA+F+ARYAEA  QG   PG+GS++D+GGG+ V++T TD++ GPLK T  PTD A+ G+GFFMV KDGE  LTRAGDFQ+TS+G L TQQGYPVL+   +PI I    GPWELT +G I Q G +Q+LA+V   SL  L K GENLFRPL +T P+   +R VVSG+LE S V  T E M++IEASRA E N+++++ QD+ML+ LVNR+LR
Sbjct:    5 LYISAEGAHAQSKRLEAVANNLANVDTVGFKRDLALFQARYAEAIEQGAGMPGNGSVDDLGGGVLVQQTQTDYSAGPLKRTMVPTDMAIEGDGFFMVQKDGEVFLTRAGDFQMTSDGQLTTQQGYPVLNDAGSPIEIEPANGPWELTPSGTIRQRGVVQNLAVVKPASLGDLVKTGENLFRPLAETEPVAAGQRHVVSGYLEASAVRPTTELMEMIEASRAVEINLSMMQTQDQMLSALVNRILR 249          
BLAST of mRNA_M-pyrifera_M_contig91459.21196.1 vs. uniprot
Match: A0A1G3ASH3_9BACT (Flagellar basal body protein n=1 Tax=Planctomycetes bacterium RBG_16_64_12 TaxID=1801971 RepID=A0A1G3ASH3_9BACT)

HSP 1 Score: 296 bits (758), Expect = 4.600e-98
Identity = 147/249 (59.04%), Postives = 190/249 (76.31%), Query Frame = 1
Query:    1 LYLSAEGAEAQSRRMEVISNNLANVNTPGFKRDLAIFEARYAEATIQGLDQPGSGSINDIGGGIYVRETATDFTMGPLKNTATPTDFAVRGEGFFMVDKDGEKLLTRAGDFQITSEGDLVTQQG---YPVLDSTENPISISLNKGPWELTENGAINQAGRLQSLALVNTESLDQLQKVGENLFRPLGKTAPIETSERRVVSGFLEQSGVSATLETMQLIEASRAFEANVALIRHQDEMLNGLVNRVLRA 738
            LYLSAEGA+AQ  R+EVI+NNLANV+T GFKR+LA+ +ARYAE T  G D PGSGSIND+GGG+ VRET TDF+ GPLK T  PTD A++GEGFF+V K+GE  LTRAG+F + ++G+LVTQ G   Y VL     P+ I+ + GPWELT +G++ QAG +Q+LA+V+  S+  L +VGEN+FRPL +  P+   +R V  G+LE SGV  T E +QLIEASRA EAN+ +I+ QDEML+GLVNRV+R+
Sbjct:   25 LYLSAEGAQAQITRLEVIANNLANVDTVGFKRELAMMQARYAEETELGQDSPGSGSINDVGGGVLVRETKTDFSPGPLKRTGVPTDMAIQGEGFFLVQKEGENFLTRAGNFLVNAQGELVTQYGQQKYAVLTDAGTPVVINPDSGPWELTPSGSVRQAGTVQNLAVVSPASMGDLVRVGENVFRPLAQPLPVAPGKRSVAGGYLEMSGVQPTSEMIQLIEASRAAEANMNMIQTQDEMLSGLVNRVMRS 273          
BLAST of mRNA_M-pyrifera_M_contig91459.21196.1 vs. uniprot
Match: A0A7C7R799_9PLAN (Flagellar basal-body rod protein FlgF n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7C7R799_9PLAN)

HSP 1 Score: 290 bits (741), Expect = 8.110e-96
Identity = 143/245 (58.37%), Postives = 187/245 (76.33%), Query Frame = 1
Query:    1 LYLSAEGAEAQSRRMEVISNNLANVNTPGFKRDLAIFEARYAEATIQGLDQPGSGSINDIGGGIYVRETATDFTMGPLKNTATPTDFAVRGEGFFMVDKDGEKLLTRAGDFQITSEGDLVTQQGYPVLDSTENPISISLNKGPWELTENGAINQAGRLQSLALVNTESLDQLQKVGENLFRPLGKTAPIETSERRVVSGFLEQSGVSATLETMQLIEASRAFEANVALIRHQDEMLNGLVNRVLR 735
            LYLSAEGA+AQ+RR+EVI+NNLANVNT GFKR LAI +ARYAEA  QG+DQ GSGSIND+GGG+++ ET TD++ GPLK T   TD A+ GEGFF+V +  E LLTRAG+F+ITS G LVTQQGY VL    +PI+I   +GPW +T +G I Q G +Q+LA+V  +S   L ++G+NLFRPL    P+  ++RRV+ G+LE S V  T E + +IEASRA EAN+ +++ QD+ML+GLVNR++R
Sbjct:    5 LYLSAEGAQAQARRLEVIANNLANVNTVGFKRQLAILQARYAEAIEQGMDQAGSGSINDVGGGVFLAETRTDYSRGPLKRTELSTDMAIDGEGFFVVRRGQENLLTRAGNFRITSAGRLVTQQGYDVLSEDGSPITIDPTRGPWYVTPSGTIRQQGTVQTLAIVAPQSPGDLVRLGKNLFRPLADPQPVPRAQRRVLPGYLEMSSVEPTTEMIAMIEASRAVEANINMMKTQDQMLSGLVNRLMR 249          
BLAST of mRNA_M-pyrifera_M_contig91459.21196.1 vs. uniprot
Match: A0A7V3JJA5_9BACT (Flagellar basal-body rod protein FlgF n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V3JJA5_9BACT)

HSP 1 Score: 286 bits (731), Expect = 7.290e-94
Identity = 142/245 (57.96%), Postives = 182/245 (74.29%), Query Frame = 1
Query:    1 LYLSAEGAEAQSRRMEVISNNLANVNTPGFKRDLAIFEARYAEATIQGLDQPGSGSINDIGGGIYVRETATDFTMGPLKNTATPTDFAVRGEGFFMVDKDGEKLLTRAGDFQITSEGDLVTQQGYPVLDSTENPISISLNKGPWELTENGAINQAGRLQSLALVNTESLDQLQKVGENLFRPLGKTAPIETSERRVVSGFLEQSGVSATLETMQLIEASRAFEANVALIRHQDEMLNGLVNRVLR 735
            LYLSA+GA AQ+RR+EVI+NNLANV+T GFKRDLAIF+ARYAE   QG+D PGSGSIND+GGG  + +T TDF+ GP+K T  PTD A+ G+GFF+V K  +  LTRAG+F++T  G+LVTQQGYPVL  T  P+ I +  GP+++T +G + Q G   +LALV       L KVGENLFRP G   P+   +RRV +G+LE SGV  T E +QLIEA+RA EAN+ L++  D+ML+GLVNR+LR
Sbjct:   36 LYLSADGAHAQARRLEVIANNLANVDTVGFKRDLAIFQARYAEEIAQGVDVPGSGSINDVGGGTMLLQTQTDFSPGPVKRTGMPTDVAIDGDGFFVVRKGDQNYLTRAGNFRLTDRGELVTQQGYPVLSETGAPVVIDMAAGPFQITPDGVVRQRGAAVALALVRPAPNSGLVKVGENLFRPQGDPQPLPAGQRRVAAGYLEMSGVRPTSEMVQLIEATRAIEANLQLMQAHDQMLSGLVNRLLR 280          
BLAST of mRNA_M-pyrifera_M_contig91459.21196.1 vs. uniprot
Match: A0A7V4HQL3_9BACT (Flagellar basal-body rod protein FlgF n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V4HQL3_9BACT)

HSP 1 Score: 284 bits (727), Expect = 1.050e-93
Identity = 145/246 (58.94%), Postives = 183/246 (74.39%), Query Frame = 1
Query:    1 LYLSAEGAEAQSRRMEVISNNLANVNTPGFKRDLAIFEARYAEATIQGLDQPGSGSINDIGGGIYVRETATDFTMGPLKNTATPTDFAVRGEGFFMVDKDGEKLLTRAGDFQITSEGDLVTQQGYPVLDSTENPISISLNKGPWELTENGAINQAGRLQSLALVNTESLDQLQKVGENLFRPLGKTAPIETSERRVVSGFLEQSGVSATLETMQLIEASRAFEANVALIRHQDEMLNGLVNRVLRA 738
            LY+SAEGA AQS+RMEVI+NNLAN++TPGFKR+LA+F+ARYAEA  QG D PGSGSIND+GGG+ +  T TDF   P K T    DFA+ G+GFF+V K  ++ LTRAG+FQ T+EG+LVTQQGY VL     PI+I    GP+E+T  GAI Q G  Q+LALV   SL  L KVGENLF+PL +T P+  +ERRV  G+LE S V  T+E +QLIEASRA EAN+ +++ QD+M+  LV RV+R+
Sbjct:    5 LYISAEGARAQSQRMEVIANNLANLDTPGFKRELAVFQARYAEAIEQGRDYPGSGSINDVGGGVMLSHTQTDFAPAPTKRTGDTNDFAILGDGFFVVQKGDQQYLTRAGNFQWTAEGNLVTQQGYAVLSDGGAPIAIDPAGGPFEVTPTGAIRQGGAAQTLALVKPNSLGDLVKVGENLFKPLAETQPLAEAERRVGWGYLEMSSVRPTMEMVQLIEASRAVEANINMMQTQDQMVAQLVARVMRS 250          
BLAST of mRNA_M-pyrifera_M_contig91459.21196.1 vs. uniprot
Match: A0A1G3A2D1_9BACT (Flagellar basal-body rod protein FlgF n=1 Tax=Planctomycetes bacterium RBG_16_64_10 TaxID=1801970 RepID=A0A1G3A2D1_9BACT)

HSP 1 Score: 268 bits (684), Expect = 3.660e-87
Identity = 137/245 (55.92%), Postives = 177/245 (72.24%), Query Frame = 1
Query:    1 LYLSAEGAEAQSRRMEVISNNLANVNTPGFKRDLAIFEARYAEATIQGLDQPGSGSINDIGGGIYVRETATDFTMGPLKNTATPTDFAVRGEGFFMVDKDGEKLLTRAGDFQITSEGDLVTQQGYPVLDSTENPISISLNKGPWELTENGAINQAGR-LQSLALVNTESLDQLQKVGENLFRPLGKTAPIETSERRVVSGFLEQSGVSATLETMQLIEASRAFEANVALIRHQDEMLNGLVNRVL 732
            +Y+SAEGA+AQ++RME +SNNLANV+TPGFKRD+A F+AR  EA  +GLDQ GSGSINDIGGG+ +    TD + G LK+T +PTDFA+ G+GFF++  D E  L+RAG+F++T+ G LVTQ G  VL+ +  PI I    GPW++ +NGAI QAG  +  LA+    S+D L KVGENLFRP   T  +  +ER V  G+LE S VS TLE M LIE SRAF AN  LI+HQD M++ L++RVL
Sbjct:    5 MYISAEGAQAQAKRMETLSNNLANVDTPGFKRDVATFQARLTEAIQRGLDQAGSGSINDIGGGVMLAGIRTDHSPGALKHTGSPTDFAIVGDGFFVIQSDREAYLSRAGNFKMTAAGQLVTQNGLAVLNDSGAPILIDPELGPWQVADNGAITQAGATIHQLAVRTPASVDDLVKVGENLFRPRAATELVPLTERTVRQGYLEGSAVSPTLEMMALIETSRAFAANTKLIQHQDHMISTLISRVL 249          
BLAST of mRNA_M-pyrifera_M_contig91459.21196.1 vs. uniprot
Match: A0A2S8FT85_9BACT (Flagellar basal body protein n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8FT85_9BACT)

HSP 1 Score: 261 bits (668), Expect = 1.120e-84
Identity = 134/249 (53.82%), Postives = 171/249 (68.67%), Query Frame = 1
Query:    1 LYLSAEGAEAQSRRMEVISNNLANVNTPGFKRDLAIFEARYAEATIQGLDQPGSGSINDIGGGIYVRETATDFTMGPLKNTATPTDFAVRGEGFFMVDKDGEKLLTRAGDFQITSEGDLVTQQGYPVLDSTENPISISLNKGPWEL----TENGAINQAGRLQSLALVNTESLDQLQKVGENLFRPLGKTAPIETSERRVVSGFLEQSGVSATLETMQLIEASRAFEANVALIRHQDEMLNGLVNRVLR 735
            LY++AEGA+AQ++R+EVI+NN+ANV+T GFKRDLA+ +ARYA+A   G D P SGSIND+GGG+YV E  TD++ G LK T  PTD A+ GEGFF ++ DGEK LTRAGDF  T+EGDLVT  G PVLD+   P+ +        +     ENG +   G +  LA+V   SL  L K G+N F PL    P+   ER+   GFLE+SGV++  E M +IEA RA+EANV LI++ DEML  LVNRVLR
Sbjct:    5 LYIAAEGAQAQAQRVEVIANNIANVDTAGFKRDLAVLQARYAQAIENGTDYPNSGSINDVGGGVYVSEKVTDYSRGSLKGTNIPTDLAIAGEGFFQIEIDGEKYLTRAGDFTFTAEGDLVTSAGNPVLDTDGVPVQVDPEALAGHIGNYFDENGFVTVGGDVIPLAMVKPASLSDLAKYGDNAFFPLAAVEPLTLEERQTRPGFLEKSGVNSITEMMTMIEAQRAYEANVNLIQNHDEMLGNLVNRVLR 253          
BLAST of mRNA_M-pyrifera_M_contig91459.21196.1 vs. uniprot
Match: A0A1G2Z5F1_9BACT (Flagellar basal-body rod protein FlgF n=1 Tax=Planctomycetes bacterium RBG_13_63_9 TaxID=1801965 RepID=A0A1G2Z5F1_9BACT)

HSP 1 Score: 255 bits (652), Expect = 5.530e-82
Identity = 128/245 (52.24%), Postives = 174/245 (71.02%), Query Frame = 1
Query:    1 LYLSAEGAEAQSRRMEVISNNLANVNTPGFKRDLAIFEARYAEATIQGLDQPGSGSINDIGGGIYVRETATDFTMGPLKNTATPTDFAVRGEGFFMVDKDGEKLLTRAGDFQITSEGDLVTQQGYPVLDSTENPISISLNKGPWELTENGAINQAGRLQSLALVNTESLDQLQKVGENLFRPLGKTAPIETSERRVVSGFLEQSGVSATLETMQLIEASRAFEANVALIRHQDEMLNGLVNRVLR 735
            LY+SAEGA+AQS R++VI+NNLANV+T GFKR+LA+ +ARYAEA  +GL  P SG I+D+GGG+ VR+T T+F+ GPL+ T   TD A++G GFF+V    E  LTRAG+F++ ++G L TQQGY VLD     I+++     W +T  GA+   G  Q+LALV   S   L +VGENLFRPL +  P+ ++ R VV G LE+S V  T E  ++I+ASRA EANV +++ QDEML GL+NR++R
Sbjct:   28 LYISAEGAQAQSTRLDVIANNLANVDTVGFKRELAVCQARYAEAITEGLKMPDSGGIDDVGGGVMVRQTVTEFSPGPLQQTNNRTDVAIKGNGFFLVRNGEETFLTRAGNFRVATDGRLTTQQGYEVLDQDGVSIAVNPADPTWAITSEGAVRGRGTSQNLALVRPVSPGDLVRVGENLFRPLTQPQPVPSTARAVVPGCLEKSAVRPTSEMTEMIQASRALEANVNMMKTQDEMLGGLINRLMR 272          
BLAST of mRNA_M-pyrifera_M_contig91459.21196.1 vs. uniprot
Match: A0A3A0DRD9_9BACT (Flagellar basal body protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3A0DRD9_9BACT)

HSP 1 Score: 252 bits (644), Expect = 5.190e-81
Identity = 130/251 (51.79%), Postives = 174/251 (69.32%), Query Frame = 1
Query:    1 LYLSAEGAEAQSRRMEVISNNLANVNTPGFKRDLAIFEARYAEATIQGLDQPGSGSINDIGGGIYVRETATDFTMGPLKNTATPTDFAVRGEGFFMVDKDGEKLLTRAGDFQITSEGDLVTQQGYPVLDSTENPISISLNKGPWELTENGAINQAG------RLQSLALVNTESLDQLQKVGENLFRPLGKTAPIETSERRVVSGFLEQSGVSATLETMQLIEASRAFEANVALIRHQDEMLNGLVNRVLR 735
            LYL+A+GA  QS+R+E+++NNLANV+T GFKR+LA+F+AR AEA  QGLDQPG   +ND+ GG+   ET TDF+ GPLK+T   TD A+ G+GFF V+KDGEK LTRAG+F I ++G+++TQ+G  VL     P+ +    GP  + E+GA+ Q         +  + +V   SL  L K GEN F PLG  A +   ERR+ SG+LE SGV AT E MQLIEA+RA E NV +IR+ D+ML+G+ NR+LR
Sbjct:    5 LYLAADGANVQSKRLEMLANNLANVDTVGFKRELAMFQARAAEAIEQGLDQPGRQGVNDLSGGVRFFETVTDFSTGPLKHTGMNTDVAILGDGFFQVEKDGEKYLTRAGNFSIDAQGNMLTQEGERVLTGGGTPVVVDRELGPAGIGEDGAVYQIAPDGQRVAVSEVGVVRPASLGDLVKRGENRFYPLGPVAVVPPDERRLRSGYLEYSGVQATSEMMQLIEATRAMEMNVNMIRNHDQMLSGITNRMLR 255          
BLAST of mRNA_M-pyrifera_M_contig91459.21196.1 vs. uniprot
Match: A0A7C4MX33_9BACT (Flagellar basal body protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C4MX33_9BACT)

HSP 1 Score: 249 bits (637), Expect = 3.210e-80
Identity = 127/234 (54.27%), Postives = 166/234 (70.94%), Query Frame = 1
Query:    1 LYLSAEGAEAQSRRMEVISNNLANVNTPGFKRDLAIFEARYAEATIQGLDQPGSGSINDIGGGIYVRETATDFTMGPLKNTATPTDFAVRGEGFFMVDKDGEKLLTRAGDFQITSEGDLVTQQGYPVLDSTENPISISLNKGPWELTENGAINQAGR-LQSLALVNTESLDQLQKVGENLFRPLGKTAPIETSERRVVSGFLEQSGVSATLETMQLIEASRAFEANVALIRHQD 699
            LYLSAEGA AQ  RM VI+NN+ANV+T GFKR+LA  +ARYA A   G+  PG GS  DIGGG++VR+T TDF+ GPL+ T  PTDFA+ GEGFF+V K  +  LTRAG+F++T+ G L TQQGY VLD +  PI IS + GPW ++ +GAI  AG  +++LA+V   S+++L KVGENLF+  G T P+   +RRV  G+LE SGV    E + LIE SR  EAN+ +++ QD
Sbjct:    5 LYLSAEGAHAQDLRMRVIANNMANVDTVGFKRELATMQARYARAIEDGMVSPGLGSPEDIGGGVFVRQTKTDFSPGPLRKTDLPTDFAIEGEGFFVVRKGDQTYLTRAGNFRVTAAGQLQTQQGYDVLDESGAPIVISPDGGPWRVSPSGAITLAGGDVRTLAIVVPSSMEELTKVGENLFQAAGGTRPLPAEQRRVAGGYLEMSGVRPAQEMIALIETSRMMEANINMMKTQD 238          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig91459.21196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y5W558_9BACT2.290e-10260.00Flagellar basal-body rod protein FlgF n=1 Tax=Pire... [more]
A0A1G3ASH3_9BACT4.600e-9859.04Flagellar basal body protein n=1 Tax=Planctomycete... [more]
A0A7C7R799_9PLAN8.110e-9658.37Flagellar basal-body rod protein FlgF n=1 Tax=Plan... [more]
A0A7V3JJA5_9BACT7.290e-9457.96Flagellar basal-body rod protein FlgF n=1 Tax=Plan... [more]
A0A7V4HQL3_9BACT1.050e-9358.94Flagellar basal-body rod protein FlgF n=1 Tax=Plan... [more]
A0A1G3A2D1_9BACT3.660e-8755.92Flagellar basal-body rod protein FlgF n=1 Tax=Plan... [more]
A0A2S8FT85_9BACT1.120e-8453.82Flagellar basal body protein n=1 Tax=Blastopirellu... [more]
A0A1G2Z5F1_9BACT5.530e-8252.24Flagellar basal-body rod protein FlgF n=1 Tax=Plan... [more]
A0A3A0DRD9_9BACT5.190e-8151.79Flagellar basal body protein n=1 Tax=Planctomycete... [more]
A0A7C4MX33_9BACT3.210e-8054.27Flagellar basal body protein (Fragment) n=1 Tax=Pl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig91459contigM-pyrifera_M_contig91459:37..777 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score242.3
Seed ortholog evalue2.4e-61
Seed eggNOG ortholog314230.DSM3645_08422
Preferred nameflhO
KEGG koko:K02388,ko:K02391,ko:K02392
KEGG Pathwayko02040,map02040
Hectar predicted targeting categoryother localisation
GOsGO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009424,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588
EggNOG free text desc.basal body rod protein
EggNOG OGs2IZZQ@203682,COG4786@1,COG4786@2
COG Functional cat.N
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02035
Exons1
Model size741
Cds size741
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816827.666671-CDS-M-pyrifera_M_contig91459:36..7771622816827.666671-CDS-M-pyrifera_M_contig91459:36..777Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91459 37..777 -
1692278202.0926428-CDS-M-pyrifera_M_contig91459:36..7771692278202.0926428-CDS-M-pyrifera_M_contig91459:36..777Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig91459 37..777 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig91459.21196.1prot_M-pyrifera_M_contig91459.21196.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig91459 37..777 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig91459.21196.1

>prot_M-pyrifera_M_contig91459.21196.1 ID=prot_M-pyrifera_M_contig91459.21196.1|Name=mRNA_M-pyrifera_M_contig91459.21196.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=247bp
LYLSAEGAEAQSRRMEVISNNLANVNTPGFKRDLAIFEARYAEATIQGLD
QPGSGSINDIGGGIYVRETATDFTMGPLKNTATPTDFAVRGEGFFMVDKD
GEKLLTRAGDFQITSEGDLVTQQGYPVLDSTENPISISLNKGPWELTENG
AINQAGRLQSLALVNTESLDQLQKVGENLFRPLGKTAPIETSERRVVSGF
LEQSGVSATLETMQLIEASRAFEANVALIRHQDEMLNGLVNRVLRA*
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mRNA from alignment at M-pyrifera_M_contig91459:37..777-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig91459.21196.1 ID=mRNA_M-pyrifera_M_contig91459.21196.1|Name=mRNA_M-pyrifera_M_contig91459.21196.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=741bp|location=Sequence derived from alignment at M-pyrifera_M_contig91459:37..777- (Macrocystis pyrifera P11B4 male)
CTGTATCTCTCCGCCGAAGGTGCCGAGGCCCAATCGCGTCGGATGGAGGT CATCTCCAACAACCTGGCCAACGTGAATACGCCGGGCTTCAAGCGAGACT TGGCAATCTTCGAAGCACGCTACGCGGAAGCCACGATTCAAGGACTCGAC CAGCCAGGATCCGGATCGATCAACGACATTGGTGGTGGCATCTATGTCCG AGAAACGGCCACCGACTTCACGATGGGCCCGCTGAAAAACACCGCCACTC CGACCGACTTCGCCGTGCGTGGCGAGGGTTTTTTCATGGTCGACAAAGAC GGCGAGAAACTGCTGACCCGGGCCGGTGATTTCCAAATCACTTCAGAAGG AGACTTGGTGACTCAGCAGGGATACCCGGTGCTCGACAGCACGGAGAACC CGATCAGCATCTCGCTCAACAAAGGTCCCTGGGAACTGACCGAGAACGGA GCCATCAATCAGGCAGGCAGGCTGCAGTCGTTGGCCCTGGTGAATACAGA ATCGCTCGATCAACTGCAAAAAGTCGGCGAAAACTTGTTCCGGCCGCTCG GTAAGACCGCGCCTATCGAAACCTCGGAGCGGCGCGTGGTGAGTGGTTTC CTCGAACAATCGGGAGTTAGCGCCACCTTGGAAACCATGCAGTTGATCGA GGCCTCGCGGGCCTTCGAAGCGAACGTGGCCCTGATTCGTCACCAGGATG AAATGCTGAACGGACTCGTGAATCGAGTCCTTCGTGCGTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig91459:37..777-

>mRNA_M-pyrifera_M_contig91459.21196.1 ID=mRNA_M-pyrifera_M_contig91459.21196.1|Name=mRNA_M-pyrifera_M_contig91459.21196.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1482bp|location=Sequence derived from alignment at M-pyrifera_M_contig91459:37..777- (Macrocystis pyrifera P11B4 male)
CTGTATCTCTCCGCCGAAGGTGCCGAGGCCCAATCGCGTCGGATGGAGGT
CATCTCCAACAACCTGGCCAACGTGAATACGCCGGGCTTCAAGCGAGACT
TGGCAATCTTCGAAGCACGCTACGCGGAAGCCACGATTCAAGGACTCGAC
CAGCCAGGATCCGGATCGATCAACGACATTGGTGGTGGCATCTATGTCCG
AGAAACGGCCACCGACTTCACGATGGGCCCGCTGAAAAACACCGCCACTC
CGACCGACTTCGCCGTGCGTGGCGAGGGTTTTTTCATGGTCGACAAAGAC
GGCGAGAAACTGCTGACCCGGGCCGGTGATTTCCAAATCACTTCAGAAGG
AGACTTGGTGACTCAGCAGGGATACCCGGTGCTCGACAGCACGGAGAACC
CGATCAGCATCTCGCTCAACAAAGGTCCCTGGGAACTGACCGAGAACGGA
GCCATCAATCAGGCAGGCAGGCTGCAGTCGTTGGCCCTGGTGAATACAGA
ATCGCTCGATCAACTGCAAAAAGTCGGCGAAAACTTGTTCCGGCCGCTCG
GTAAGACCGCGCCTATCGAAACCTCGGAGCGGCGCGTGGTGAGTGGTTTC
CTCGAACAATCGGGAGTTAGCGCCACCTTGGAAACCATGCAGTTGATCGA
GGCCTCGCGGGCCTTCGAAGCGAACGTGGCCCTGATTCGTCACCAGGATG
AAATGCTGAACGGACTCGTGAATCGAGTCCTTCGTGCGTAACTGTATCTC
TCCGCCGAAGGTGCCGAGGCCCAATCGCGTCGGATGGAGGTCATCTCCAA
CAACCTGGCCAACGTGAATACGCCGGGCTTCAAGCGAGACTTGGCAATCT
TCGAAGCACGCTACGCGGAAGCCACGATTCAAGGACTCGACCAGCCAGGA
TCCGGATCGATCAACGACATTGGTGGTGGCATCTATGTCCGAGAAACGGC
CACCGACTTCACGATGGGCCCGCTGAAAAACACCGCCACTCCGACCGACT
TCGCCGTGCGTGGCGAGGGTTTTTTCATGGTCGACAAAGACGGCGAGAAA
CTGCTGACCCGGGCCGGTGATTTCCAAATCACTTCAGAAGGAGACTTGGT
GACTCAGCAGGGATACCCGGTGCTCGACAGCACGGAGAACCCGATCAGCA
TCTCGCTCAACAAAGGTCCCTGGGAACTGACCGAGAACGGAGCCATCAAT
CAGGCAGGCAGGCTGCAGTCGTTGGCCCTGGTGAATACAGAATCGCTCGA
TCAACTGCAAAAAGTCGGCGAAAACTTGTTCCGGCCGCTCGGTAAGACCG
CGCCTATCGAAACCTCGGAGCGGCGCGTGGTGAGTGGTTTCCTCGAACAA
TCGGGAGTTAGCGCCACCTTGGAAACCATGCAGTTGATCGAGGCCTCGCG
GGCCTTCGAAGCGAACGTGGCCCTGATTCGTCACCAGGATGAAATGCTGA
ACGGACTCGTGAATCGAGTCCTTCGTGCGTAA
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