mRNA_M-pyrifera_M_contig90913.21077.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90913.21077.1
Unique NamemRNA_M-pyrifera_M_contig90913.21077.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90913.21077.1 vs. uniprot
Match: A0A5A8CR15_CAFRO (Chorismate synthase n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CR15_CAFRO)

HSP 1 Score: 225 bits (574), Expect = 8.260e-67
Identity = 139/266 (52.26%), Postives = 165/266 (62.03%), Query Frame = 1
Query:    1 PGQSRVTTARSEKDKVKILSGTEHGMTLGTPIALQVANEDMRKRDYSAMLSVPRPGHGDFTYQAKYGIRAESGGGRSSARETVGRVAAGAVAEKWLKTTYSISITTFVSSVGFLQLPQILWRRPDGTSWSREEVDKIGTLEILKIKPTSKSIPSSSSSSLEDE-----ETNFACIANAPLAALAKGEDISSLPPLPAAYRDWRGTLRDCVGREVESEVDEERGEETDGELIVLRCPNEMWACRMASLIRVVRNERDSTGGCLVTVV 783
            PGQSR+TT RSEKDKV ILSGTE GMTLGTPI L V NE++R  DY  M  +PRPGH D+TYQ KYGIRA SGGGRSSARET+GRVAAGA+AEKWL  T+   I TFVSSVG + L   L   P G +W+REEVD  G L +L+     K I + ++  +E +         A    A  AA   G   S +    A YR   GTL D  G+ V S      G     E+I LRCP+   A RMA+LIR V++ +DSTGG L TVV
Sbjct:   48 PGQSRLTTPRSEKDKVTILSGTERGMTLGTPIGLFVRNENVRPGDYKEMSVIPRPGHADYTYQVKYGIRAASGGGRSSARETIGRVAAGAIAEKWLAETWGTRIVTFVSSVGVIDLAPELLCHPSGRAWTREEVDSRGRLRVLRSAAHWKQIDAPAADGVEPDAGTKVSPEQAAADAADEAAFVAGSYGSGV----ACYRADDGTLFDRDGKTVASA----EGALVTDEVITLRCPDPATASRMATLIRDVKSCQDSTGGVLTTVV 305          
BLAST of mRNA_M-pyrifera_M_contig90913.21077.1 vs. uniprot
Match: A0A7S0NGB0_9EUKA (Chorismate synthase n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0NGB0_9EUKA)

HSP 1 Score: 223 bits (568), Expect = 2.010e-66
Identity = 133/267 (49.81%), Postives = 169/267 (63.30%), Query Frame = 1
Query:    1 PGQSRVTTARSEKDKVKILSGTEHGMTLGTPIALQVANEDMRKRDYSAMLSVPRPGHGDFTYQAKYGIRAESGGGRSSARETVGRVAAGAVAEKWLKTTYSISITTFVSSVGFLQLPQILWRRPD-GTSWSREEVDKIGTLEILKI-----KPTSKSIPSSSSSSLEDEETNFACIANAPLAAL-AKGEDISSLPPLPAAYRDWRGTLRDCVGREVESEVDEERGEETDGELIVLRCPNEMWACRMASLIRVVRNERDSTGGCLVTV 780
            PGQSR+TT R+EKD V ILSGTEHG TLGTPI L V NED R  DY  M ++PRPGH DFTYQ KYG RA SGGGRSSARET+GRVAAGA+AEKWLK  Y   I  +V S+G +++P++     D G  WSR +VDK+GTL++L+      + T K  P   +   +  E   A   +A L  L A GE +SS+    A Y DW G   +  G +V++    +  E    EL+ LRCP+   AC+MA+LIR V++E DS GG +  V
Sbjct:   48 PGQSRLTTPRAEKDLVTILSGTEHGYTLGTPIGLLVPNEDQRPGDYKEMSNIPRPGHADFTYQIKYGTRASSGGGRSSARETIGRVAAGAIAEKWLKEQYGCEIACWVDSIGSVRMPEVAVPESDEGRGWSRADVDKLGTLKLLRRPTEWHEVTEKEEPDPEARKKKKNEIEVAA-EDAFLKDLQAGGEKLSSV----ATYEDWEGNFYNHDGDKVKAPA--KPAEWRTDELLPLRCPHPPTACKMATLIRQVKSESDSIGGTVACV 307          
BLAST of mRNA_M-pyrifera_M_contig90913.21077.1 vs. uniprot
Match: A0A7S0JXH3_CAFRO (Chorismate synthase n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0JXH3_CAFRO)

HSP 1 Score: 225 bits (574), Expect = 1.130e-64
Identity = 139/266 (52.26%), Postives = 165/266 (62.03%), Query Frame = 1
Query:    1 PGQSRVTTARSEKDKVKILSGTEHGMTLGTPIALQVANEDMRKRDYSAMLSVPRPGHGDFTYQAKYGIRAESGGGRSSARETVGRVAAGAVAEKWLKTTYSISITTFVSSVGFLQLPQILWRRPDGTSWSREEVDKIGTLEILKIKPTSKSIPSSSSSSLEDE-----ETNFACIANAPLAALAKGEDISSLPPLPAAYRDWRGTLRDCVGREVESEVDEERGEETDGELIVLRCPNEMWACRMASLIRVVRNERDSTGGCLVTVV 783
            PGQSR+TT RSEKDKV ILSGTE GMTLGTPI L V NE++R  DY  M  +PRPGH D+TYQ KYGIRA SGGGRSSARET+GRVAAGA+AEKWL  T+   I TFVSSVG + L   L   P G +W+REEVD  G L +L+     K I + ++  +E +         A    A  AA   G   S +    A YR   GTL D  G+ V S      G     E+I LRCP+   A RMA+LIR V++ +DSTGG L TVV
Sbjct:   48 PGQSRLTTPRSEKDKVTILSGTERGMTLGTPIGLFVRNENVRPGDYKEMSVIPRPGHADYTYQVKYGIRAASGGGRSSARETIGRVAAGAIAEKWLAETWGTRIVTFVSSVGVIDLAPELLCHPSGRAWTREEVDSRGRLRVLRSAAHWKQIDAPAADGVEPDAGTKVSPEQAAADAADEAAFVAGSYGSGV----ACYRADDGTLFDRDGKTVASA----EGALVTDEVITLRCPDPATASRMATLIRDVKSCQDSTGGVLTTVV 305          
BLAST of mRNA_M-pyrifera_M_contig90913.21077.1 vs. uniprot
Match: A0A7S4J1X4_9EUKA (Chorismate synthase n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4J1X4_9EUKA)

HSP 1 Score: 216 bits (551), Expect = 1.010e-63
Identity = 132/268 (49.25%), Postives = 166/268 (61.94%), Query Frame = 1
Query:    1 PGQSRVTTARSEKDKVKILSGTEHGMTLGTPIALQVANEDMRKRDYSAMLSVPRPGHGDFTYQAKYGIRAESGGGRSSARETVGRVAAGAVAEKWLKTTYSISITTFVSSVGFLQLPQ-ILWRRPDGTSWSREEVDKIGTLEILKIKPTSKSIPSSSSSSLEDEETNFACIANAPLAALAK-----GEDISSLPPLPAAYRDWRGTLRDCVGREVE--SEVDEERGEETDGELIVLRCPNEMWACRMASLIRVVRNERDSTGGCLVTV 780
            PGQSR+TT R+EKD V ILSGTE G TLGTPI L V NED R  DY  M  +PRPGH DFTYQ KYG RA SGGGRSSARET+GRVAAGA+AEKWLK TY   ++ +VSS+G +Q+P+ ++     G  WSREEVD++GTL +L+     K  P ++           A   NA   A  K     G  + +L   P+ Y D  G L +  G  V   S +DE R +E    L+ LRCP+   AC+MA+LIR V+ ++DS GG +  V
Sbjct:   66 PGQSRLTTPRAEKDLVTILSGTEFGYTLGTPIGLLVKNEDQRPGDYGEMNDIPRPGHADFTYQIKYGNRASSGGGRSSARETIGRVAAGAIAEKWLKETYGCEVSCWVSSIGDVQMPESVVAMSAGGRGWSREEVDELGTLRLLRHPDHYK--PPAAGXXXXXXXXALAAAENAAEDAFLKVLTEGGASLQALLQTPS-YEDHAGQLYNHAGEPVAPVSNLDEWRSDE----LLPLRCPHPPSACKMATLIRQVKADKDSIGGTVACV 326          
BLAST of mRNA_M-pyrifera_M_contig90913.21077.1 vs. uniprot
Match: A0A7S3FAU3_9EUKA (Chorismate synthase n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3FAU3_9EUKA)

HSP 1 Score: 210 bits (534), Expect = 2.370e-61
Identity = 134/269 (49.81%), Postives = 170/269 (63.20%), Query Frame = 1
Query:    1 PGQSRVTTARSEKDKVKILSGTEHGMTLGTPIALQVANEDMRKRDYSAMLSVPRPGHGDFTYQAKYGIRAESGGGRSSARETVGRVAAGAVAEKWLKTTYSISITTFVSSVGFLQLPQ-ILWRRPDGTSWSREEVDKIGTLEILKI----KP-TSKSIPSSSSSSLEDEETNFACIANAPLAALAKG-EDISSLPPLPAAYRDWRGTLRDCVGREVESEV--DEERGEETDGELIVLRCPNEMWACRMASLIRVVRNERDSTGGCLVTV 780
            PGQSR+TT R+EKD V ILSGTE G TLGTPI L V NED R  DY  M +VPRPGH DFTYQ KYG RA SGGGRSSARET+GRVAAGA+AEKWL  TY   I+ +VSS+G +QLP+  +     G  W+REEVD++G L +L+     KP T+  +P   +      +   +   +A L  L++G E +  L   P  Y DW+G L +  G  V S +  D+ R   TD EL+ LRCP+   A +MA+LIR V+  +DS GG +  V
Sbjct:   50 PGQSRLTTPRAEKDLVTILSGTEFGYTLGTPIGLLVKNEDQRPGDYKEMSAVPRPGHADFTYQIKYGNRASSGGGRSSARETIGRVAAGAIAEKWLHATYGCEISCWVSSIGHIQLPEEAVPLSAGGQGWTREEVDQLGCLRLLRHPKHWKPITASDVPDEGARKKAQMQAENSA-EDAFLKTLSEGGEALKELLSCPT-YEDWQGVLYNHEGEVVGSPLALDDWR---TD-ELLPLRCPHPPTASKMATLIRQVKAAQDSIGGTVACV 312          
BLAST of mRNA_M-pyrifera_M_contig90913.21077.1 vs. uniprot
Match: A0A7R9UQ40_DIALT (Chorismate synthase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UQ40_DIALT)

HSP 1 Score: 205 bits (522), Expect = 9.920e-60
Identity = 126/261 (48.28%), Postives = 161/261 (61.69%), Query Frame = 1
Query:    1 PGQSRVTTARSEKDKVKILSGTEHGMTLGTPIALQVANEDMRKRDYSAMLSVPRPGHGDFTYQAKYGIRAESGGGRSSARETVGRVAAGAVAEKWLKTTYSISITTFVSSVGFLQLPQILWRRPDGTSWSREEVDKIGTLEILKIKPTSK-SIPSSSSSSLEDEETNFACIANAPLAALAKGEDISSLPPLPAAYRDWRGTLRDCVGREVESEVDEERGEETDGELIVLRCPNEMWACRMASLIRVVRNERDSTGGCLVTV 780
            PGQS +TT R+E DKV ILSGTE G TLGTPI L V NED R  DY  M +VPRPGH D+TYQ KYG RA SGGGRSSARET+GRVAAGA+AEKWL  TY   I T+V+SVG + +P+ +     G  W+REEVD++G L +L+        + + + +    +       A+A  A LA  E+ ++      AYRD  G +    G  + S      G  TD +L+ LRCP+   ACRMA+LIR V+  +DS GG L T+
Sbjct:   53 PGQSTLTTPRNEADKVTILSGTEFGRTLGTPIGLFVPNEDQRPGDYKEMSAVPRPGHADYTYQLKYGTRASSGGGRSSARETIGRVAAGAIAEKWLFQTYGTRIVTWVNSVGSVGIPEDVVAE-HGCGWTREEVDRLGALVLLRDPARFPIDLAALTGADAAPKAAELQRKADAEQAFLAAAEEDAT-----PAYRDASGAIYTRSGALIASPPANVAGWATD-DLVSLRCPHPPTACRMATLIRHVKAAKDSIGGTLTTM 306          
BLAST of mRNA_M-pyrifera_M_contig90913.21077.1 vs. uniprot
Match: A0A7S0LBU4_9EUKA (Chorismate synthase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LBU4_9EUKA)

HSP 1 Score: 205 bits (521), Expect = 2.030e-59
Identity = 123/266 (46.24%), Postives = 167/266 (62.78%), Query Frame = 1
Query:    1 PGQSRVTTARSEKDKVKILSGTEHGMTLGTPIALQVANEDMRKRDYSAMLSVPRPGHGDFTYQAKYGIRAESGGGRSSARETVGRVAAGAVAEKWLKTTYSISITTFVSSVGFLQLPQ--ILWRRPDGTSWSREEVDKIGTLEILKIKPTSKSIPSSSSSSLEDEETNFACIA----NAPLAALAKGEDISSLPPLPAAYRDWRGTLRDCVGREVESEVDEERGEETDGELIVLRCPNEMWACRMASLIRVVRNERDSTGGCLVTV 780
            PGQSR+TT R+EKD V ILSGTE+G TLGTPI L V NED R  DY  M  +PRPGH DF+Y  KYG +A SGGGRSSARET+GRVAAGA+AEKWL  TY  +I+ +VS++G   +P+  I         W+REEVDK+GTL +L+     + +  +  ++ ++ +     +     NA L A A  E  ++L  +P+ Y D  G L +  G  ++    +     TD EL+ LRCP+ + AC+MA+LIR V+ E+DS GG +  V
Sbjct:   48 PGQSRLTTPRAEKDLVSILSGTEYGYTLGTPIGLFVKNEDQRPGDYKEMSKIPRPGHADFSYLVKYGTKASSGGGRSSARETIGRVAAGAIAEKWLNETYGTTISCWVSAIGEHSIPEGEIPVASDGRVGWTREEVDKLGTLRLLRDPKHWRELTEADEANKDERKKRQMALEIEAENAFLQAAA-AEGGAALCDVPS-YEDHSGKLYNHRGELIKDTPQQLDSWRTD-ELLPLRCPHPVTACKMATLIRQVKKEKDSIGGSVACV 310          
BLAST of mRNA_M-pyrifera_M_contig90913.21077.1 vs. uniprot
Match: A0A7S2R9G3_9STRA (Chorismate synthase n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2R9G3_9STRA)

HSP 1 Score: 203 bits (516), Expect = 7.660e-59
Identity = 124/264 (46.97%), Postives = 164/264 (62.12%), Query Frame = 1
Query:    1 PGQSRVTTARSEKDKVKILSGTEHGMTLGTPIALQVANEDMRKRDYSAMLSVPRPGHGDFTYQAKYGIRAESGGGRSSARETVGRVAAGAVAEKWLKTTYSISITTFVSSVGFLQLPQILWRRPDGTSWSREEVDKIGTLEILKIKPTS--KSIPSSSSSSLEDEETNFACIANAPLAALAKGEDISSLPPLPAAYRDWRGTLRDCVGREVESE-VDEERGEETDGELIVLRCPNEMWACRMASLIRVVRNERDSTGGCLVTVV 783
            PGQSR+TT R E D V I SG E G TLGTPIAL V N ++R  DY  M  VPRPGH D+TYQ KYGIRA SGGGR+SARET+GRVAAGAVAEKWL+ TY   I +FV S+G +Q+     + P G  W+REEVD  G L IL+   T   K+  +   ++L++++           A +  G ++    P   AY D +  + +  G  ++ + +D  +   TD EL+ +RCP+   AC+MASLIR V++E DS GGC+  VV
Sbjct:   48 PGQSRLTTPRDEADVVTIRSGVECGWTLGTPIALTVDNLNVRPGDYKEMSKVPRPGHADYTYQVKYGIRATSGGGRASARETIGRVAAGAVAEKWLRETYGTEIVSFVYSIGDIQITPDGMKHPSGRPWTREEVDTEGQLRILRNASTGWKKTDDAKLQATLDEKDEE---------AFVRAGAELDKETP---AYLDAQNRVYNRHGVLLKDKTLDSVQASLTD-ELVKVRCPHPPTACKMASLIRKVKSESDSIGGCVCCVV 298          
BLAST of mRNA_M-pyrifera_M_contig90913.21077.1 vs. uniprot
Match: A0A2D4BEX0_PYTIN (Chorismate synthase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BEX0_PYTIN)

HSP 1 Score: 202 bits (515), Expect = 9.640e-59
Identity = 120/262 (45.80%), Postives = 165/262 (62.98%), Query Frame = 1
Query:    1 PGQSRVTTARSEKDKVKILSGTEHGMTLGTPIALQVANEDMRKRDYSAMLSVPRPGHGDFTYQAKYGIRAESGGGRSSARETVGRVAAGAVAEKWLKTTYSISITTFVSSVGFLQLPQILWRRPDG-TSWSREEVDKIGTLEILKIKPTSKSIPSSSSSSLEDEETNFACIANAPLAALAKGEDISSLPPLPAAYRDWRGTLRDCVGREVESEVDEERGEETDGELIVLRCPNEMWACRMASLIRVVRNERDSTGGCLVTVV 783
            PGQS++TT R EKD V I+SGTE GMTLGTP+AL V NE++R +DY  M +VPRPGH D+TYQ KYG RA SGGGRSSARET+GRVAAGA+AEKWL++ Y  SI  +VSS+G +++P+ L   P   T ++R +VD+IGTL IL+       IPS        E+ ++A    A  AA       ++      AY D    + +  G  V +   E   E    +L+ +RCP+   AC M++ +R+ ++E+DSTGG +  V+
Sbjct:   48 PGQSKLTTPRDEKDLVTIMSGTERGMTLGTPVALFVPNENVRPQDYKEMNAVPRPGHADYTYQMKYGTRAASGGGRSSARETIGRVAAGAIAEKWLRSKYETSIVAWVSSIGSVEMPRDLLNDPKKKTGYTRSDVDEIGTLRILRDPSRWTRIPS--------EDADYAAKQAAADAAYEAIFVTATSDLKTPAYMDKNQVVYNRQGDVVPAP--ENVSEWLTDDLVPVRCPHPPSACAMSTEVRICKHEQDSTGGVVTCVI 299          
BLAST of mRNA_M-pyrifera_M_contig90913.21077.1 vs. uniprot
Match: A0A0M0JMD8_9EUKA (Chorismate synthase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JMD8_9EUKA)

HSP 1 Score: 203 bits (516), Expect = 1.110e-58
Identity = 129/267 (48.31%), Postives = 171/267 (64.04%), Query Frame = 1
Query:    1 PGQSRVTTARSEKDKVKILSGTEHGMTLGTPIALQVANEDMRKRDYSAMLSVPRPGHGDFTYQAKYGIRAESGGGRSSARETVGRVAAGAVAEKWLKTTYSISITTFVSSVGFLQLPQILWRRPDG-TSWSREEVDKIGTLEILKIKPTSKSIPSSSSS--SLEDEETNFACIANAPLAALAK----GEDISSLPPLPAAYRDWRGTLRDCVGREVESEVDEERGEETDGELIVLRCPNEMWACRMASLIRVVRNERDSTGGCLVTV 780
            PGQSR+TT R+EKD V I+SGTE G TLGTPI L V NED R  DYS M S+PRPGH DFTYQ KYG RA SGGGRSSARET+GRVAAGA+AEK+L  TY  ++  +VSS+G + +P       DG   W+REE+D  GTL +L+  P+   + S S    + + ++   A    +  A LA+     E +++L  +P+ Y D  G L +  G EV + ++    + TD EL+ LRCP+    CRMA+LIR V++E+DS GG +  V
Sbjct:   48 PGQSRLTTPRAEKDLVTIMSGTEFGFTLGTPIGLFVPNEDQRPGDYSEMDSIPRPGHADFTYQIKYGTRASSGGGRSSARETIGRVAAGAIAEKFLLETYGTTVNCWVSSIGDVSMPDSAVALADGGRGWTREEIDTHGTLCMLR-NPSHWHVVSESEEPDAAQRKKKQMALEIASEEAFLAQYNGGPEALAALAAVPS-YADHEGKLYNHAGVEVVAPINLAAWQ-TD-ELLPLRCPHPPTCCRMATLIRQVKSEQDSIGGTVACV 310          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90913.21077.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8CR15_CAFRO8.260e-6752.26Chorismate synthase n=2 Tax=Cafeteria roenbergensi... [more]
A0A7S0NGB0_9EUKA2.010e-6649.81Chorismate synthase n=1 Tax=Phaeocystis antarctica... [more]
A0A7S0JXH3_CAFRO1.130e-6452.26Chorismate synthase n=1 Tax=Cafeteria roenbergensi... [more]
A0A7S4J1X4_9EUKA1.010e-6349.25Chorismate synthase n=1 Tax=Prymnesium polylepis T... [more]
A0A7S3FAU3_9EUKA2.370e-6149.81Chorismate synthase n=1 Tax=Haptolina ericina TaxI... [more]
A0A7R9UQ40_DIALT9.920e-6048.28Chorismate synthase n=2 Tax=Diacronema lutheri Tax... [more]
A0A7S0LBU4_9EUKA2.030e-5946.24Chorismate synthase n=1 Tax=Coccolithus braarudii ... [more]
A0A7S2R9G3_9STRA7.660e-5946.97Chorismate synthase n=1 Tax=labyrinthulid quahog p... [more]
A0A2D4BEX0_PYTIN9.640e-5945.80Chorismate synthase n=1 Tax=Pythium insidiosum Tax... [more]
A0A0M0JMD8_9EUKA1.110e-5848.31Chorismate synthase n=1 Tax=Chrysochromulina tobin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90913contigM-pyrifera_M_contig90913:3..785 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score197.2
Seed ortholog evalue9.5e-48
Seed eggNOG ortholog4787.PITG_01769T0
Preferred nameARO2
KEGG rclassRC00586
KEGG koko:K01736
KEGG ReactionR01714
KEGG Pathwayko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230
KEGG ModuleM00022
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009507,GO:0009536,GO:0009987,GO:0010181,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0042602,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Chorismate synthase
EggNOG OGs3QBZE@4776,COG0082@1,KOG4492@2759
EC4.2.3.5
COG Functional cat.E
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size783
Cds size783
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816821.5576065-CDS-M-pyrifera_M_contig90913:2..7851622816821.5576065-CDS-M-pyrifera_M_contig90913:2..785Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90913 3..785 -
1692278198.3603537-CDS-M-pyrifera_M_contig90913:2..7851692278198.3603537-CDS-M-pyrifera_M_contig90913:2..785Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90913 3..785 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90913.21077.1prot_M-pyrifera_M_contig90913.21077.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90913 3..785 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90913.21077.1

>prot_M-pyrifera_M_contig90913.21077.1 ID=prot_M-pyrifera_M_contig90913.21077.1|Name=mRNA_M-pyrifera_M_contig90913.21077.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=261bp
PGQSRVTTARSEKDKVKILSGTEHGMTLGTPIALQVANEDMRKRDYSAML
SVPRPGHGDFTYQAKYGIRAESGGGRSSARETVGRVAAGAVAEKWLKTTY
SISITTFVSSVGFLQLPQILWRRPDGTSWSREEVDKIGTLEILKIKPTSK
SIPSSSSSSLEDEETNFACIANAPLAALAKGEDISSLPPLPAAYRDWRGT
LRDCVGREVESEVDEERGEETDGELIVLRCPNEMWACRMASLIRVVRNER
DSTGGCLVTVV
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mRNA from alignment at M-pyrifera_M_contig90913:3..785-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90913.21077.1 ID=mRNA_M-pyrifera_M_contig90913.21077.1|Name=mRNA_M-pyrifera_M_contig90913.21077.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=783bp|location=Sequence derived from alignment at M-pyrifera_M_contig90913:3..785- (Macrocystis pyrifera P11B4 male)
CCTGGACAATCTCGAGTGACAACAGCGCGATCTGAGAAGGACAAAGTAAA AATATTATCTGGTACAGAGCATGGTATGACTCTTGGAACCCCTATTGCGT TGCAAGTAGCGAACGAAGATATGCGAAAACGTGACTACAGCGCCATGTTA TCAGTCCCTCGTCCTGGACACGGAGATTTCACATACCAGGCCAAGTATGG AATTCGTGCCGAATCTGGAGGTGGGAGGTCATCAGCTCGAGAAACTGTAG GCAGGGTTGCAGCCGGAGCAGTGGCTGAAAAATGGCTCAAAACTACCTAT TCAATTTCTATTACAACGTTTGTGTCTTCTGTTGGGTTTCTACAGCTCCC TCAAATACTCTGGCGTCGACCTGATGGTACATCGTGGTCTCGTGAGGAAG TTGACAAAATTGGAACACTGGAAATCTTGAAAATCAAACCAACTTCAAAG TCTATTCCTTCTTCATCCTCATCGTCTTTGGAGGATGAAGAAACAAACTT TGCTTGCATTGCCAACGCTCCACTCGCTGCACTTGCAAAGGGTGAAGACA TCTCATCCCTTCCTCCACTCCCTGCTGCATATAGAGATTGGCGAGGAACT CTTCGTGATTGTGTGGGAAGAGAAGTTGAAAGTGAGGTGGATGAAGAACG AGGAGAGGAGACAGATGGGGAGTTGATTGTGTTACGATGTCCCAATGAAA TGTGGGCTTGTAGGATGGCTAGTTTGATTCGAGTGGTACGAAATGAGAGA GATTCCACTGGTGGATGTCTTGTGACTGTGGTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90913:3..785-

>mRNA_M-pyrifera_M_contig90913.21077.1 ID=mRNA_M-pyrifera_M_contig90913.21077.1|Name=mRNA_M-pyrifera_M_contig90913.21077.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1566bp|location=Sequence derived from alignment at M-pyrifera_M_contig90913:3..785- (Macrocystis pyrifera P11B4 male)
CCTGGACAATCTCGAGTGACAACAGCGCGATCTGAGAAGGACAAAGTAAA
AATATTATCTGGTACAGAGCATGGTATGACTCTTGGAACCCCTATTGCGT
TGCAAGTAGCGAACGAAGATATGCGAAAACGTGACTACAGCGCCATGTTA
TCAGTCCCTCGTCCTGGACACGGAGATTTCACATACCAGGCCAAGTATGG
AATTCGTGCCGAATCTGGAGGTGGGAGGTCATCAGCTCGAGAAACTGTAG
GCAGGGTTGCAGCCGGAGCAGTGGCTGAAAAATGGCTCAAAACTACCTAT
TCAATTTCTATTACAACGTTTGTGTCTTCTGTTGGGTTTCTACAGCTCCC
TCAAATACTCTGGCGTCGACCTGATGGTACATCGTGGTCTCGTGAGGAAG
TTGACAAAATTGGAACACTGGAAATCTTGAAAATCAAACCAACTTCAAAG
TCTATTCCTTCTTCATCCTCATCGTCTTTGGAGGATGAAGAAACAAACTT
TGCTTGCATTGCCAACGCTCCACTCGCTGCACTTGCAAAGGGTGAAGACA
TCTCATCCCTTCCTCCACTCCCTGCTGCATATAGAGATTGGCGAGGAACT
CTTCGTGATTGTGTGGGAAGAGAAGTTGAAAGTGAGGTGGATGAAGAACG
AGGAGAGGAGACAGATGGGGAGTTGATTGTGTTACGATGTCCCAATGAAA
TGTGGGCTTGTAGGATGGCTAGTTTGATTCGAGTGGTACGAAATGAGAGA
GATTCCACTGGTGGATGTCTTGTGACTGTGGTTCCTGGACAATCTCGAGT
GACAACAGCGCGATCTGAGAAGGACAAAGTAAAAATATTATCTGGTACAG
AGCATGGTATGACTCTTGGAACCCCTATTGCGTTGCAAGTAGCGAACGAA
GATATGCGAAAACGTGACTACAGCGCCATGTTATCAGTCCCTCGTCCTGG
ACACGGAGATTTCACATACCAGGCCAAGTATGGAATTCGTGCCGAATCTG
GAGGTGGGAGGTCATCAGCTCGAGAAACTGTAGGCAGGGTTGCAGCCGGA
GCAGTGGCTGAAAAATGGCTCAAAACTACCTATTCAATTTCTATTACAAC
GTTTGTGTCTTCTGTTGGGTTTCTACAGCTCCCTCAAATACTCTGGCGTC
GACCTGATGGTACATCGTGGTCTCGTGAGGAAGTTGACAAAATTGGAACA
CTGGAAATCTTGAAAATCAAACCAACTTCAAAGTCTATTCCTTCTTCATC
CTCATCGTCTTTGGAGGATGAAGAAACAAACTTTGCTTGCATTGCCAACG
CTCCACTCGCTGCACTTGCAAAGGGTGAAGACATCTCATCCCTTCCTCCA
CTCCCTGCTGCATATAGAGATTGGCGAGGAACTCTTCGTGATTGTGTGGG
AAGAGAAGTTGAAAGTGAGGTGGATGAAGAACGAGGAGAGGAGACAGATG
GGGAGTTGATTGTGTTACGATGTCCCAATGAAATGTGGGCTTGTAGGATG
GCTAGTTTGATTCGAGTGGTACGAAATGAGAGAGATTCCACTGGTGGATG
TCTTGTGACTGTGGTT
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